| .. |
|
artemis
|
Initial import of artemis 4.0
|
2001-12-22 14:39:40 +00:00 |
|
avida
|
Make biology/avida building on -current again
|
2002-11-03 23:40:02 +00:00 |
|
babel
|
update biology/babel to properly output mm3 files.
|
2003-01-03 08:52:41 +00:00 |
|
biojava
|
Unbreak this port:
|
2002-06-16 01:08:49 +00:00 |
|
chemeq
|
upgrade to V110-1
|
2002-04-21 13:33:29 +00:00 |
|
clustalw
|
- Add a new patch
|
2002-03-27 14:01:57 +00:00 |
|
coalesce
|
Add coalesce 1.50, a program to fit population models.
|
2001-08-06 14:41:58 +00:00 |
|
crimap
|
Add crimap 2.4, a tool for the creation of multilocus linkage maps.
|
2002-03-27 14:42:56 +00:00 |
|
deft
|
PERL -> REINPLACE
|
2002-11-04 05:46:38 +00:00 |
|
distribfold
|
Fix typo: distribfold.org -> distributedfolding.org
|
2002-12-19 18:33:55 +00:00 |
|
dna-qc
|
PERL -> REINPLACE
|
2002-11-04 05:46:38 +00:00 |
|
emboss
|
- Unbreak fetching of distfiles. (Needs update as soon as freeze is over.)
|
2002-09-27 08:58:19 +00:00 |
|
fasta
|
Replace erroneous usage of INSTALL_MAN with INSTALL_DATA.
|
2001-07-03 09:08:26 +00:00 |
|
fasta3
|
Prefer <limits.h> over <values.h> as the latter has been removed from
|
2002-08-23 03:36:33 +00:00 |
|
fastdnaml
|
Add NOPORTDOCS support to pkg-plist
|
2001-07-08 18:15:34 +00:00 |
|
flip
|
PERL -> REINPLACE
|
2002-11-04 05:46:38 +00:00 |
|
fluctuate
|
Add fluctuate 1.30, a program to fit population models.
|
2001-08-06 14:45:39 +00:00 |
|
gaussian98
|
Remove USE_NEWGCC, which is no longer supported or required.
|
2002-08-31 02:38:29 +00:00 |
|
genpak
|
o Rollback PORTCOMMENT modifications while this feature's implementation
|
2002-11-10 16:48:51 +00:00 |
|
gff2ps
|
PERL -> REINPLACE
|
2002-11-04 01:56:21 +00:00 |
|
gperiodic
|
Deploy USE_GNOMENG infrastructure
|
2002-08-30 12:59:40 +00:00 |
|
grappa
|
- Update to version 1.0.3
|
2001-08-29 11:53:29 +00:00 |
|
hmmer
|
- Add patch that will, for -CURRENT only, change: -pthread -> -lc_r
|
2002-07-11 10:52:14 +00:00 |
|
kinemage
|
|
|
|
L-Breeder
|
Mark BROKEN due to "Unknown problem"
|
2002-11-25 02:11:13 +00:00 |
|
lamarc
|
Add lamarc 2001.08.06,
|
2001-08-07 08:17:58 +00:00 |
|
libgenome
|
add missing include
|
2002-12-29 04:44:13 +00:00 |
|
migrate
|
- Update to version 1.2.4
|
2001-08-22 14:43:45 +00:00 |
|
molden
|
Note distribution term.
|
2002-05-27 06:25:53 +00:00 |
|
mopac
|
Add NOPORTDOCS support to pkg-plist
|
2001-07-08 18:15:34 +00:00 |
|
nab
|
PERL -> REINPLACE
|
2002-11-04 01:56:21 +00:00 |
|
ncbi-toolkit
|
add forgotten "USE_REINPLACE=yes"
|
2002-09-21 14:56:18 +00:00 |
|
nclever
|
Add nclever 4.0, a character-based version of NCBI's Entrez program.
|
2001-09-26 09:22:02 +00:00 |
|
ortep3
|
|
|
|
p5-AcePerl
|
CC, CXX, CFLAGS, PTHREAD_CFLAGS and PTHREAD_LIBS may contain `/' in
|
2002-10-10 12:59:36 +00:00 |
|
p5-bioperl
|
- Update to version 0.7.2, somewhat overdue. :-)
|
2002-01-25 11:46:09 +00:00 |
|
p5-bioperl-devel
|
- Add NO_LATEST_LINK, which should've been there in the first place. :-(
|
2001-09-20 15:11:14 +00:00 |
|
paml
|
- Update to version 3.1
|
2001-08-29 12:00:08 +00:00 |
|
phylip
|
Update to version 3.6.a3.
|
2002-08-13 16:07:45 +00:00 |
|
pkg
|
|
|
|
platon
|
add USE_XLIB
|
2001-07-30 21:05:54 +00:00 |
|
povchem
|
PERL -> REINPLACE
|
2002-11-04 02:35:01 +00:00 |
|
primer3
|
Updated to fix problems as stated in PR ports/42915
|
2002-11-07 13:45:17 +00:00 |
|
psi88
|
update WWW and master site
|
2001-10-22 06:36:14 +00:00 |
|
py-biopython
|
Use $PYNUMERIC in the dependencies.
|
2002-07-15 11:37:35 +00:00 |
|
pymol
|
1. add a missing dependency on png and unbreak.
|
2002-11-19 23:01:49 +00:00 |
|
rasmol
|
o Rollback PORTCOMMENT modifications while this feature's implementation
|
2002-11-10 16:48:51 +00:00 |
|
recombine
|
Add recombine 1.40, a program to fit population models across sites.
|
2001-08-06 14:49:53 +00:00 |
|
ruby-bio
|
Use RUBY_MOD*.
|
2002-10-06 21:08:30 +00:00 |
|
seaview
|
unbroke by upgrade to 20021018
|
2002-11-20 14:03:25 +00:00 |
|
seqio
|
Remove a redundant trailing space.
|
2001-10-21 07:55:45 +00:00 |
|
sim4
|
Update to sim4-2002.03.03 to unbreak build.
|
2002-05-04 21:45:10 +00:00 |
|
spdbv
|
upgrade to 3.7
|
2003-01-02 03:57:58 +00:00 |
|
t_coffee
|
Add t_coffee 1.37, a multiple DNA or protein sequence alignment package.
|
2002-01-25 14:58:16 +00:00 |
|
tinker
|
Upgrade tinker to the latest revision
|
2002-01-19 15:15:16 +00:00 |
|
treepuzzle
|
add treepuzzle 5.1
|
2002-11-20 08:54:10 +00:00 |
|
treeviewx
|
Chase new name of wxgtk shared library.
|
2002-09-09 14:21:08 +00:00 |
|
tRNAscan-SE
|
Port needs perl to build.
|
2002-11-04 01:47:57 +00:00 |
|
wise
|
Modify replace RE to match syntax of sed now ("\)" -> ")"
|
2002-11-05 01:44:12 +00:00 |
|
xdrawchem
|
Use ${ECHO_CMD} instead of ${ECHO} where you mean the echo command;
|
2002-01-29 09:39:59 +00:00 |
|
xmolwt
|
Deploy USE_GNOMENG infrastructure
|
2002-08-30 12:59:40 +00:00 |
|
Makefile
|
add treepuzzle 5.1
|
2002-11-20 08:54:10 +00:00 |
