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artemis
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Initial import of artemis 4.0
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2001-12-22 14:39:40 +00:00 |
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avida
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Make biology/avida building on -current again
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2002-11-03 23:40:02 +00:00 |
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babel
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update biology/babel to properly output mm3 files.
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2003-01-03 08:52:41 +00:00 |
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biojava
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Unbreak this port:
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2002-06-16 01:08:49 +00:00 |
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chemeq
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upgrade to V110-1
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2002-04-21 13:33:29 +00:00 |
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clustalw
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- Add a new patch
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2002-03-27 14:01:57 +00:00 |
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coalesce
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Add coalesce 1.50, a program to fit population models.
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2001-08-06 14:41:58 +00:00 |
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crimap
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Add crimap 2.4, a tool for the creation of multilocus linkage maps.
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2002-03-27 14:42:56 +00:00 |
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deft
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PERL -> REINPLACE
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2002-11-04 05:46:38 +00:00 |
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distribfold
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Fix typo: distribfold.org -> distributedfolding.org
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2002-12-19 18:33:55 +00:00 |
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dna-qc
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PERL -> REINPLACE
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2002-11-04 05:46:38 +00:00 |
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emboss
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- Unbreak fetching of distfiles. (Needs update as soon as freeze is over.)
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2002-09-27 08:58:19 +00:00 |
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fasta
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fasta3
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Prefer <limits.h> over <values.h> as the latter has been removed from
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2002-08-23 03:36:33 +00:00 |
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fastdnaml
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Add NOPORTDOCS support to pkg-plist
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2001-07-08 18:15:34 +00:00 |
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flip
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PERL -> REINPLACE
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2002-11-04 05:46:38 +00:00 |
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fluctuate
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Add fluctuate 1.30, a program to fit population models.
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2001-08-06 14:45:39 +00:00 |
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gaussian98
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Remove USE_NEWGCC, which is no longer supported or required.
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2002-08-31 02:38:29 +00:00 |
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genpak
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o Rollback PORTCOMMENT modifications while this feature's implementation
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2002-11-10 16:48:51 +00:00 |
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gff2ps
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PERL -> REINPLACE
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2002-11-04 01:56:21 +00:00 |
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gperiodic
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Deploy USE_GNOMENG infrastructure
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2002-08-30 12:59:40 +00:00 |
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grappa
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- Update to version 1.0.3
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2001-08-29 11:53:29 +00:00 |
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hmmer
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- Add patch that will, for -CURRENT only, change: -pthread -> -lc_r
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2002-07-11 10:52:14 +00:00 |
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kinemage
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L-Breeder
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Mark BROKEN due to "Unknown problem"
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2002-11-25 02:11:13 +00:00 |
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lamarc
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Add lamarc 2001.08.06,
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2001-08-07 08:17:58 +00:00 |
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libgenome
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add missing include
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2002-12-29 04:44:13 +00:00 |
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migrate
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- Update to version 1.2.4
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2001-08-22 14:43:45 +00:00 |
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molden
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Update to 3.8
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2003-01-08 12:05:57 +00:00 |
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mopac
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Add NOPORTDOCS support to pkg-plist
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2001-07-08 18:15:34 +00:00 |
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nab
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PERL -> REINPLACE
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2002-11-04 01:56:21 +00:00 |
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ncbi-toolkit
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add forgotten "USE_REINPLACE=yes"
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2002-09-21 14:56:18 +00:00 |
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nclever
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Add nclever 4.0, a character-based version of NCBI's Entrez program.
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2001-09-26 09:22:02 +00:00 |
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ortep3
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p5-AcePerl
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CC, CXX, CFLAGS, PTHREAD_CFLAGS and PTHREAD_LIBS may contain `/' in
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2002-10-10 12:59:36 +00:00 |
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p5-bioperl
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- Update to version 0.7.2, somewhat overdue. :-)
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2002-01-25 11:46:09 +00:00 |
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p5-bioperl-devel
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- Add NO_LATEST_LINK, which should've been there in the first place. :-(
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2001-09-20 15:11:14 +00:00 |
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paml
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- Update to version 3.1
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2001-08-29 12:00:08 +00:00 |
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phylip
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Update to version 3.6.a3.
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2002-08-13 16:07:45 +00:00 |
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pkg
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platon
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add USE_XLIB
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2001-07-30 21:05:54 +00:00 |
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povchem
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PERL -> REINPLACE
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2002-11-04 02:35:01 +00:00 |
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primer3
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Updated to fix problems as stated in PR ports/42915
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2002-11-07 13:45:17 +00:00 |
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psi88
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update WWW and master site
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2001-10-22 06:36:14 +00:00 |
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py-biopython
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Use $PYNUMERIC in the dependencies.
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2002-07-15 11:37:35 +00:00 |
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pymol
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1. add a missing dependency on png and unbreak.
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2002-11-19 23:01:49 +00:00 |
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rasmol
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o Rollback PORTCOMMENT modifications while this feature's implementation
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2002-11-10 16:48:51 +00:00 |
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recombine
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Add recombine 1.40, a program to fit population models across sites.
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2001-08-06 14:49:53 +00:00 |
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ruby-bio
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Use RUBY_MOD*.
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2002-10-06 21:08:30 +00:00 |
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seaview
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unbroke by upgrade to 20021018
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2002-11-20 14:03:25 +00:00 |
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seqio
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Remove a redundant trailing space.
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2001-10-21 07:55:45 +00:00 |
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sim4
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Update to sim4-2002.03.03 to unbreak build.
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2002-05-04 21:45:10 +00:00 |
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spdbv
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upgrade to 3.7
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2003-01-02 03:57:58 +00:00 |
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t_coffee
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Add t_coffee 1.37, a multiple DNA or protein sequence alignment package.
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2002-01-25 14:58:16 +00:00 |
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tinker
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Upgrade tinker to the latest revision
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2002-01-19 15:15:16 +00:00 |
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treepuzzle
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add treepuzzle 5.1
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2002-11-20 08:54:10 +00:00 |
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treeviewx
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Chase new name of wxgtk shared library.
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2002-09-09 14:21:08 +00:00 |
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tRNAscan-SE
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Port needs perl to build.
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2002-11-04 01:47:57 +00:00 |
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wise
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Modify replace RE to match syntax of sed now ("\)" -> ")"
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2002-11-05 01:44:12 +00:00 |
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xdrawchem
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Use ${ECHO_CMD} instead of ${ECHO} where you mean the echo command;
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2002-01-29 09:39:59 +00:00 |
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xmolwt
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Deploy USE_GNOMENG infrastructure
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2002-08-30 12:59:40 +00:00 |
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Makefile
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add treepuzzle 5.1
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2002-11-20 08:54:10 +00:00 |
