Yuri Victorovich 139c2db343 science/yoda: Update 1.9.4 -> 1.9.6		2022-08-23 20:45:14 -07:00
..
2d-rewriter
abinit	*/*: Replace science/szip with science/libaec	2022-06-16 23:13:01 +08:00
afni	science/afni: update to 22.1.14	2022-06-28 07:22:58 +02:00
agrum	science/agrum: Update 1.1.0 -> 1.1.1	2022-06-11 13:29:59 -07:00
aircraft-datcom
ALPSCore	*/*: Replace science/szip with science/libaec	2022-06-16 23:13:01 +08:00
antioch	math/gsl: bump portrevision of consumers after update to 2.7.1	2022-01-12 20:41:22 +01:00
apbs
ascent	*/*: Replace science/szip with science/libaec	2022-06-16 23:13:01 +08:00
atompaw	science/atompaw: Update 4.2.0.0 -> 4.2.0.1	2022-06-13 20:26:14 -07:00
avogadro2	science/avogadro2: Update 1.94.0 -> 1.95.1	2022-02-05 01:44:22 -08:00
avogadrolibs	*/*: Replace science/szip with science/libaec	2022-06-16 23:13:01 +08:00
axom	science/axom: Broken on armv7	2022-08-07 20:56:55 -07:00
bagel	science/bagel: Update 1.2.2 -> 1.2.2-132	2022-06-23 00:39:22 -07:00
bddsolve	devel/boost-all: bump all library consumers after boost upgrade	2022-05-22 23:17:16 +03:00
berkeleygw	science/berkeleygw: Update 2.0.0 -> 3.0.1	2022-05-20 22:25:01 -07:00
bodr
buddy
cantera	science/cantera: Minor simplification	2022-06-29 01:21:31 -07:00
cdcl
cdf	*: Clean up some things	2022-01-17 14:20:25 +01:00
cdk	science/cdk: Update 2.3 -> 2.7.1	2022-06-03 09:49:16 -07:00
cdo	*/*: Replace science/szip with science/libaec	2022-06-16 23:13:01 +08:00
cgnslib	*/*: Replace science/szip with science/libaec	2022-06-16 23:13:01 +08:00
cgribex	*/*: Replace science/szip with science/libaec	2022-06-16 23:13:01 +08:00
checkmol	lang/fpc: Fix build issues building some fpc based apps	2022-06-20 20:17:20 -05:00
chemical-mime-data	textproc/libxml2: bump all LIB_DEPENDS consumers	2022-04-10 15:11:41 -04:00
chemicalfun	science/chemicalfun: New port: C++ library for working with chemical reactions and formulas	2022-01-18 10:42:45 -08:00
chemps2	*/*: Replace science/szip with science/libaec	2022-06-16 23:13:01 +08:00
chemtool
chemtool-devel	science/chemtool-devel: Fix build on FreeBSD 13.1R and 14	2022-08-11 14:32:55 +01:00
chimes-calculator	science/chimes-calculator: New port: Chebyshev Interaction Model for Efficient Simulation	2022-01-18 23:05:13 -08:00
chrono	*/*: Replace science/szip with science/libaec	2022-06-16 23:13:01 +08:00
clhep
clipper
code_saturne	science/code_saturne: upgrade to 7.1.1	2022-04-26 22:46:44 +02:00
colt
conduit	*/*: Replace science/szip with science/libaec	2022-06-16 23:13:01 +08:00
coordgenlibs	science/coordgenlibs: Update 2.0.3 -> 3.0.0	2021-09-09 13:00:09 -07:00
cp2k	science/cp2k: Broken on systems where OpenMP isn't enabled	2022-07-24 19:06:32 -07:00
cp2k-data	science/cp2k-data: Update 7.1.0 -> 9.1.0	2022-05-23 18:34:17 -07:00
crf++
csvtk	*/*: Bump port revisons after lang/go{117,118} update	2022-06-07 16:56:10 -05:00
dakota	science/dakota: Fix LIB_DEPENDS after science/szip removal	2022-06-17 03:57:52 +08:00
dalton
dcl
devisor
dftbplus	science/dftbplus: Update 21.2 -> 22.1	2022-05-25 23:52:58 -07:00
dftd4	science/dftd4: Update 3.3.0 -> 3.4.0	2022-04-30 12:48:30 -07:00
dkh
dlib-cpp
drawxtl
dvc
dynare	*/*: Replace science/szip with science/libaec	2022-06-16 23:13:01 +08:00
eccodes	science/eccodes: Update to 2.26.0	2022-06-03 17:00:25 +08:00
elk	science/elk: Update 8.4.6 -> 8.4.21	2022-06-05 13:21:25 -07:00
elmerfem	science/elmerfem: Fix bug that build selected arbitrary Python versions	2022-07-21 10:24:17 -07:00
epte	*: Return culot@'s ports to the pool (and perl@) after safekeeping his bit.	2021-09-06 23:13:27 +02:00
erd
ergo	Fix CONFLICTS entries of multiple ports	2022-01-10 16:15:39 +01:00
erkale	*/*: Replace science/szip with science/libaec	2022-06-16 23:13:01 +08:00
erkale-pseudopotentials	science/erkale{,-pseudopotentials}: Update g20200426 -> g20220405	2022-05-24 12:51:17 -07:00
fastcap
fasthenry
fastjet
fisicalab	math/gsl: bump portrevision of consumers after update to 2.7.1	2022-01-12 20:41:22 +01:00
fleur	textproc/libxml2: bump all LIB_DEPENDS consumers	2022-04-10 15:11:41 -04:00
frontistr
fsom
fvcom	science/netcdf-fortran: Update to 4.5.4	2022-03-08 02:10:59 +08:00
fvcom-mpi	*: Clean up some things	2021-10-12 17:01:38 +02:00
gabedit	science/gabedit: Improve BROKEN lines and options	2022-07-20 12:27:24 -07:00
gamess-us
gbtolib	science/gbtolib: Broken on systems where OpenMP isn't enabled	2022-07-30 00:35:18 -07:00
gchemutils	textproc/libxml2: bump all LIB_DEPENDS consumers	2022-04-10 15:11:41 -04:00
gdma
getdp	devel/cmake: Update to 3.23.0	2022-05-16 08:49:43 +02:00
ghemical	science/ghemical: Fix path to mopac port	2022-06-19 09:02:23 -07:00
ghmm	textproc/libxml2: bump all LIB_DEPENDS consumers	2022-04-10 15:11:41 -04:00
gnudatalanguage	*/*: Replace science/szip with science/libaec	2022-06-16 23:13:01 +08:00
gpaw-setups
gramps	science/gramps: remove option for expired py-bsddb3	2022-07-02 11:31:15 +02:00
grib_api	graphics/jasper: Bump PORTREVISION of dependent ports for shlib change after cdcedd316d	2022-04-17 04:55:37 +08:00
gromacs	science/gromacs: Update 2022.1 -> 2022.2	2022-06-17 10:05:29 -07:00
gsmc
gtamsanalyzer
h5utils
h5z-zfp
harminv
hdf	*/*: Replace science/szip with science/libaec	2022-06-16 23:13:01 +08:00
hdf5	science/hdf5: Sort PLIST	2022-06-16 23:27:43 +08:00
hdf5-18	*/*: Replace science/szip with science/libaec	2022-06-16 23:13:01 +08:00
healpix	astro/cfitsio: Update to 4.0.0	2022-02-28 23:06:56 +08:00
helfem	science/helfem: Fix build with clang-14	2022-06-24 12:29:39 -07:00
hepmc3	science/hepmc3: Update 3.2.4 -> 3.2.5	2022-05-12 11:57:53 -07:00
highfive	science/highfive: Update 2.4.0 -> 2.4.1	2022-05-12 11:57:51 -07:00
hypre	science/hypre: Update 2.24.0 -> 2.25.0	2022-06-16 21:03:50 -07:00
iboview
InsightToolkit	*/*: Replace science/szip with science/libaec	2022-06-16 23:13:01 +08:00
isaac-cfd
jdftx	science/jdftx: Update 1.6.0 -> 1.7.0	2022-01-29 09:24:02 -08:00
jmol	science/jmol: Update 14.32.59 -> 14.32.61	2022-06-25 19:22:56 -07:00
jstrack
kalzium	KDE: Update KDE Gear to 22.04.3	2022-07-07 23:50:27 +02:00
kim-api	science/kim-api: Update 2.2.1 -> 2.3.0	2022-03-19 18:18:45 -07:00
kplib/files	science/kplib: Remove -march=native to fix build on some architectures	2022-07-23 13:26:08 -07:00
kst2	science/kst2: Fix build with newer HDF5 (1.10.8+ or 1.12.1+)	2022-07-14 17:23:36 +03:00
lammps	science/lammps: Fix MPI option; Change VTK option to use VTK-9.1	2022-06-28 10:53:36 -07:00
lamprop
latte
libaec	science/libaec: Update to 1.0.6	2021-09-28 03:48:08 +08:00
libccp4
libcint	science/libcint: Update 5.1.2 -> 5.1.3	2022-06-16 11:24:43 -07:00
libctl
libecpint	science/libecpint: Update 1.0.6 -> 1.0.7	2021-12-14 14:41:53 -08:00
libefp
libgeodecomp	science/libgeodecomp: mark as BROKEN after recent boost upgrade	2022-05-22 23:17:12 +03:00
libgetar	science/libgetar: New port: Library to read and write GEneric Trajectory ARchives	2022-06-27 10:58:02 -07:00
libghemical	science/libghemical: Remove LD_PRELOAD vecause it configured now without it	2021-09-26 10:43:55 -07:00
libgridxc
libint
libint2	science/libint2: Update 2.7.1 -> 2.7.2	2022-06-26 00:20:17 -07:00
libkml	devel/googletest: update to 1.12.1	2022-06-30 15:27:20 +00:00
liblinear	science/liblinear: Update to 2.44	2022-03-31 06:03:39 +08:00
libmbd	science/libmbd: New port: Many-body dispersion library	2022-01-16 21:15:11 -08:00
libmsym
libnegf	science/libnegf: Update 1.0.3 -> 1.1.2	2022-05-18 13:51:37 -07:00
liboglappth	*: fix tab vs. space issues, and comments according to the guide.	2021-10-16 11:51:39 +02:00
libquantum
libssm
libsvm	*: Clean up some things	2021-10-12 17:01:38 +02:00
libsvm-python
libtensorflow1	science/libtensorflow1: disallow newer Bazel	2022-06-12 21:01:13 +01:00
libvdwxc
libxc	science/libxc: Update 5.1.7 -> 5.2.3	2022-05-24 10:30:13 -07:00
liggghts	science/liggghts: Update 3.8.0-26 -> 3.8.0-45	2022-06-28 09:48:28 -07:00
linux-zotero	science/linux-zotero: Clean up	2021-11-08 00:33:54 +01:00
luscus
madness
maeparser	devel/boost-all: bump all library consumers after boost upgrade	2022-05-22 23:17:16 +03:00
massxpert	science/massxpert: Improve port	2022-05-19 21:38:15 +02:00
mbdyn	science/mbdyn: fix build on powerpc64*	2021-11-08 15:52:33 +00:00
mcstas
mcstas-comps
mctc-lib	science/mctc-lib: Update 0.2.5 -> 0.3.0	2022-04-19 20:40:01 -07:00
mcxtrace	*/*: fix trailing whitespace in pkg-descr's	2022-04-01 18:09:49 +03:00
mcxtrace-comps
mdynamix	*/*: fix trailing whitespace in pkg-descr's	2022-04-01 18:09:49 +03:00
medit
metaphysicl	science/metaphysicl: Update 1.3.2 -> 1.3.3	2021-12-13 09:19:09 -08:00
minc2	science/netcdf: Update to 4.8.1	2022-03-08 02:10:58 +08:00
mmdb2	science/mmdb2: Update 2.0.20 -> 2.0.22	2022-04-30 09:03:26 -07:00
mmtf-cpp
mol2ps	lang/fpc: Fix build issues building some fpc based apps	2022-06-20 20:17:20 -05:00
molgif	*/*: Bump port revisons after lang/go{117,118} update	2022-06-07 16:56:10 -05:00
molscript
molsketch
mopac	biology/mopac: Move to science/mopac; Add TIMESTAMP to distinfo; Take maintainership	2022-06-19 00:52:28 -07:00
mpb
mpqc	science/mpqc: regen plist after doxygen update (+)	2021-12-16 11:49:52 +03:00
msms	Style: improve ONLY_FOR_ARCHS_REASON (grammar, markup, etc.)	2021-10-25 12:58:29 +00:00
mstore	*/*: In 7 ports remove GNU-10.3.0 from install paths	2022-01-18 12:12:05 -08:00
multicharge	science/multicharge: Update 0.1.2 -> 0.2.0	2022-05-05 23:21:10 -07:00
multiwfn
namd	Style: improve ONLY_FOR_ARCHS_REASON (grammar, markup, etc.)	2021-10-25 12:58:29 +00:00
nest	science/nest: remove redundant USES=compiler	2022-05-31 03:06:02 +00:00
netcdf	science/netcdf: Update to 4.9.0	2022-06-22 04:57:22 +08:00
netcdf-cxx	science/netcdf-cxx: Update MASTER_SITES	2022-03-08 02:10:59 +08:00
netcdf-fortran	science/netcdf-fortran: Update to 4.5.4	2022-03-08 02:10:59 +08:00
nifticlib	*/*: Remove redundant '-[0-9]*' from CONFLICTS	2021-10-29 11:50:18 +02:00
nwchem	science/nwchem: Update 7.0.2.20211110 -> 7.0.2.20220224	2022-02-25 10:19:33 -08:00
nwchem-data
octopus	science/octopus: Cosmetic changes	2022-05-31 02:12:09 -07:00
openbabel	devel/boost-all: bump all library consumers after boost upgrade	2022-05-22 23:17:16 +03:00
openems	science/openems: Update 0.0.35-71 -> 0.0.35-76	2022-06-26 14:37:35 -07:00
openkim
openkim-models	science/openkim-models: Update 2021-01-28 -> 2021-08-11	2022-05-08 11:02:07 -07:00
openmc	*/*: Replace science/szip with science/libaec	2022-06-16 23:13:01 +08:00
openmolcas	*/*: Replace science/szip with science/libaec	2022-06-16 23:13:01 +08:00
openmx	science/openmx: Cleanup - remove unnecessary lines	2021-09-05 10:00:44 -07:00
opensim-core
opensph	misc/openvdb: Update 9.0.0 -> 9.1.0	2022-06-11 13:29:59 -07:00
opsin
orthanc	devel/googletest: update to 1.12.1	2022-06-30 15:27:20 +00:00
orthanc-dicomweb	devel/boost-all: bump all library consumers after boost upgrade	2022-05-22 23:17:16 +03:00
orthanc-mysql	devel/boost-all: bump all library consumers after boost upgrade	2022-05-22 23:17:16 +03:00
orthanc-postgresql	devel/boost-all: bump all library consumers after boost upgrade	2022-05-22 23:17:16 +03:00
orthanc-webviewer	devel/boost-all: bump all library consumers after boost upgrade	2022-05-22 23:17:16 +03:00
p5-Algorithm-SVMLight
p5-Chemistry-3DBuilder
p5-Chemistry-Bond-Find
p5-Chemistry-Canonicalize
p5-Chemistry-Elements	science/p5-Chemistry-Elements: Update to 1.075	2021-11-06 03:15:55 +08:00
p5-Chemistry-File-MDLMol
p5-Chemistry-File-Mopac
p5-Chemistry-File-PDB
p5-Chemistry-File-SLN
p5-Chemistry-File-SMARTS
p5-Chemistry-File-SMILES
p5-Chemistry-File-VRML
p5-Chemistry-File-XYZ
p5-Chemistry-FormulaPattern
p5-Chemistry-InternalCoords
p5-Chemistry-Isotope
p5-Chemistry-MacroMol
p5-Chemistry-MidasPattern
p5-Chemistry-Mok
p5-Chemistry-Mol
p5-Chemistry-Pattern
p5-Chemistry-Reaction
p5-Chemistry-Ring
p5-Geo-BUFR
p5-Geo-Coordinates-Converter
p5-Geo-Coordinates-Converter-iArea
p5-Geo-WebService-Elevation-USGS	science/p5-Geo-WebService-Elevation-USGS: Update to 0.120	2021-11-06 03:15:56 +08:00
p5-Mcstas-Tools
p5-PerlMol
p5-Physics-Unit	*: Return culot@'s ports to the pool (and perl@) after safekeeping his bit.	2021-09-06 23:13:27 +02:00
packmol
pagmo2	devel/boost-all: bump all library consumers after boost upgrade	2022-05-22 23:17:16 +03:00
paje
paraview	science/paraview: unbreak after the upgrade of science/netcdf	2022-07-05 13:27:25 +02:00
pastix	science/pastix: adding PaStiX, a sparse direct solver	2022-04-23 18:41:10 +02:00
pcmsolver	science/pcmsolver: Remove CMAKE_EXE_LINKER_FLAGS from cmake configure arguments	2022-07-19 01:41:19 -07:00
PETSc	science/PETSc: Update 3.14.1 -> 3.16.3	2022-01-07 00:34:46 -08:00
phonopy	science/phonopy: Update 2.15.0 -> 2.15.1	2022-05-28 21:52:24 -07:00
plumed	science/plumed: Use upsteam release archive	2022-05-23 13:39:54 +02:00
pnetcdf
precice	science/precice: Add options; Backport patch provided by upstream	2022-06-21 14:02:33 -07:00
pulseview	all: return bsam's ports to the pool after his commit bit got safekept	2022-06-06 13:19:04 +02:00
py-abipy
py-access	science/py-access: Update to 1.1.8	2022-06-09 18:59:16 +08:00
py-asap3	science/py-asap3: Fix python suffix in shared library name	2022-06-29 01:17:56 -07:00
py-asdf	science/py-asdf: Update to 2.12.0	2022-06-09 18:59:17 +08:00
py-asdf-standard	science/py-asdf-standard: Update to 1.0.2	2022-04-18 07:58:22 +08:00
py-asdf-transform-schemas	science/py-asdf-standard: Update to 1.0.2	2022-04-18 07:58:22 +08:00
py-ase	science/py-ase: Add test target	2022-06-19 03:01:29 -07:00
py-avogadrolibs	science/py-avogadrolibs: Update 1.94.0 -> 1.95.1	2022-02-05 01:44:22 -08:00
py-cdo	science/py-cdo: Update to 1.5.6	2022-01-24 02:50:47 +08:00
py-chainer	devel/protobuf: Update to 3.20.0	2022-04-16 12:19:07 +08:00
py-chainer-chemistry
py-chempy	science/py-chempy: switch to USES=pytest, fix tests and document failing ones	2022-04-26 20:26:11 +03:00
py-cirq-aqt	science/py-cirq-*: Update 0.14.1 -> 0.15.0	2022-07-01 01:44:59 -07:00
py-cirq-core	science/py-cirq-*: Update 0.14.1 -> 0.15.0	2022-07-01 01:44:59 -07:00
py-cirq-google	science/py-cirq-*: Update 0.14.1 -> 0.15.0	2022-07-01 01:44:59 -07:00
py-cirq-ionq	science/py-cirq-*: Update 0.14.1 -> 0.15.0	2022-07-01 01:44:59 -07:00
py-cirq-pasqal	science/py-cirq-*: Update 0.14.1 -> 0.15.0	2022-07-01 01:44:59 -07:00
py-cirq-rigetti	science/py-cirq-rigetti: New port: Cirq module to run on Rigetti quantum computers	2022-07-01 18:55:15 -07:00
py-coards
py-DendroPy	science/py-DendroPy: Update to 4.5.2	2022-06-05 15:43:08 +08:00
py-dipy	science/py-dipy: Update 1.4.1 -> 1.5.0	2022-04-24 12:42:21 -07:00
py-dlib
py-eccodes	science/py-eccodes: Update to 1.4.2	2022-05-22 12:37:30 +08:00
py-esda	science/py-esda: Add SHAPE option	2021-09-21 11:44:54 +08:00
py-fresnel	math/qhull: Renaming ports	2022-02-18 15:15:30 -06:00
py-geolinks
py-geomet
py-geometer	science/py-geometer: Update to 0.3.4	2022-04-26 23:01:29 +08:00
py-geometric
py-gpaw	science/py-gpaw: Update 21.6.0 -> 22.1.0	2022-01-13 02:25:40 -08:00
py-GPy	science/py-GPy: Broken on systems where OpenMP isn't enabled	2022-07-23 18:19:33 -07:00
py-GPyOpt
py-gsd	science/py-gsd: Update 2.5.1 -> 2.5.2	2022-04-19 18:08:13 -07:00
py-h5json
py-h5py	science/py-h5py: Convert to USE_PYTHON=pytest	2022-06-04 00:57:26 +08:00
py-hiphive	science/py-hiphive: Update 1.0 -> 1.1	2022-05-07 10:11:29 -07:00
py-hoomd-blue	science/py-hoomd-blue: Update 3.1.0 -> 3.2.0	2022-05-19 19:10:19 -07:00
py-inequality	science/py-inequality: Update USES=python	2021-11-06 03:14:23 +08:00
py-jupyter_jsmol	science/py-jupyter_jsmol: switch to USES=pytest, fix testing	2022-04-26 16:45:58 +03:00
py-kim-query	science/py-kim-query: Update 1.1.0 -> 3.0.0	2022-05-08 11:02:07 -07:00
py-kinematics	science/py-kinematics: Update USES=python	2021-11-06 03:14:24 +08:00
py-kliff	science/py-kliff: Update 0.3.3 -> 0.4.0	2022-04-29 12:40:02 -07:00
py-liac-arff
py-libgetar	science/py-libgetar: Fix tests	2022-06-27 15:39:42 -07:00
py-libpysal	science/py-libpysal: Update to 4.6.2	2022-03-25 21:37:13 +08:00
py-lifelines
py-MDAnalysis	science/py-MDAnalysis*: upgrade to 2.2.0	2022-06-21 19:26:21 +02:00
py-MDAnalysisTests	science/py-MDAnalysis*: upgrade to 2.2.0	2022-06-21 19:26:21 +02:00
py-mdp	science/py-mdp: Fix build with setuptools 58.0.0+	2022-03-25 21:38:19 +08:00
py-mmtf-python
py-molmod
py-moltemplate	science/py-moltemplate: Update 2.20.5 -> 2.20.6	2022-07-01 15:41:38 -07:00
py-netCDF4	science/netcdf: Update to 4.8.1	2022-03-08 02:10:58 +08:00
py-netcdf-flattener
py-nibabel	science/py-nibabel: Update 3.2.1 -> 3.2.2	2022-04-24 12:42:19 -07:00
py-nilearn	science/py-nilearn: mark BROKEN	2022-03-23 14:44:26 +03:00
py-obspy	science/py-obspy: Update to 1.3.0	2022-03-14 12:14:38 +08:00
py-oddt	science/py-oddt: Not install tests	2022-03-25 10:28:34 -07:00
py-OpenFermion	science/py-OpenFermion: Update 1.2.0 -> 1.3.0	2021-12-23 17:54:58 -08:00
py-OpenMC	science/{,py-}openmc: Update 0.12.2 -> 0.13.0	2022-05-08 13:55:59 -07:00
py-openpiv	science/py-openpiv: update to 0.23.8	2021-11-06 00:17:44 +03:00
py-paida	science/py-paida: Fix build with setuptools 58.0.0+	2022-03-25 21:38:19 +08:00
py-paramz
py-phono3py
py-phonopy	science/py-phonopy: Update 2.14.0 -> 2.15.1	2022-06-05 23:31:07 -07:00
py-PubChemPy	science/py-PubChemPy: New port: Simple Python wrapper around the PubChem PUG REST API	2021-07-27 06:16:51 -07:00
py-pupynere	science/py-pupynere: Update USES=python	2021-11-06 03:14:24 +08:00
py-py3Dmol	science/py-py3Dmol: New port: IPython interface for embedding 3Dmol.js views	2022-06-15 13:56:03 -07:00
py-pyaixi
py-pyberny	science/py-pyberny: New port: Optimizer of molecular geometries with respect to the total energy	2021-10-16 16:56:19 -07:00
py-pycsw	science/py-pycsw: Update to 2.6.1	2021-10-25 23:57:35 +08:00
py-pydicom	science/py-pydicom: Update to 2.3.0	2022-04-07 11:41:06 +00:00
py-PyFR	science/py-PyFR: Update 1.13.0 -> 1.14.0	2022-05-05 23:21:10 -07:00
py-pygeodesy	science/py-pygeodesy: Update to 22.1.22	2022-02-28 20:46:23 +08:00
py-pygeometa	science/py-pygeometa: Update to 0.11.1	2022-06-22 00:36:23 +08:00
py-pygmo2	devel/boost-all: bump all library consumers after boost upgrade	2022-05-22 23:17:16 +03:00
py-pyked	devel/py-pint: Update to 0.19.1	2022-04-18 07:58:18 +08:00
py-pymatgen	science/py-pymatgen: Update 2022.0.17 -> 2022.4.26	2022-05-09 20:50:24 -07:00
py-pymol	textproc/libxml2: bump all LIB_DEPENDS consumers	2022-04-10 15:11:41 -04:00
py-PyNE	*/*: Replace science/szip with science/libaec	2022-06-16 23:13:01 +08:00
py-pyosf
py-pyprecice	science/py-pyprecice: New port: Coupling library for partitioned multi-physics simulations	2022-06-20 09:53:12 -07:00
py-pysal	science/py-pysal: Update to 2.6.0	2022-03-08 02:11:26 +08:00
py-pyscf	science/py-pyscf: Unbreak fetch	2022-01-12 20:40:22 -08:00
py-pyteomics	science/py-pyteomics: Update to 4.5.3	2022-03-25 21:37:13 +08:00
py-qcelemental	science/py-qcelemental: Update 0.24.0 -> 0.25.0	2022-06-15 13:56:03 -07:00
py-qcengine	devel/py-pint: Update to 0.19.1	2022-04-18 07:58:18 +08:00
py-qspin	science/py-qspin: Fix build with setuptools 58.0.0+	2022-03-25 21:38:19 +08:00
py-quantities	science/py-quantities: Update 0.12.5 -> 0.13.0	2022-01-14 08:48:13 -08:00
py-rmf	science/{,py-}rmf: Update 1.3.1 -> 1.4	2022-03-11 08:59:47 -08:00
py-rmsd
py-ruffus
py-scikit-fuzzy
py-scikit-learn	cience/py-scikit-learn: Update to 1.1.1	2022-06-13 10:44:37 +08:00
py-scikit-optimize	science/py-scikit-optimize: Update to 0.9.0	2021-10-25 23:57:36 +08:00
py-scikit-sparse	science/py-scikit-sparse: Update 0.4.5 -> 0.4.6	2021-09-13 15:28:57 -07:00
py-scimath
py-scipy	science/py-scipy: Update to 1.8.1	2022-05-25 15:46:45 +08:00
py-scoria
py-segregation	science/py-segregation: Update to 2.2.3	2022-04-18 07:58:23 +08:00
py-segyio	science/py-segyio: switch to USES=pytest and fix tests	2022-04-26 16:46:03 +03:00
py-SimpleSpectral
py-sklearn-pandas	science/py-sklearn-pandas: Add py-sklearn-pandas 2.2.0	2022-01-29 07:26:35 +08:00
py-skrebate	science/py-skrebate: Update USES=python	2021-11-06 03:14:24 +08:00
py-spaghetti	science/py-spaghetti: Update to 1.6.5	2022-01-24 02:50:48 +08:00
py-spglib	science/{,py-}spglib: Update 1.16.3 -> 1.16.5	2022-05-07 22:27:10 -07:00
py-tensorflow	devel/icu: update to 71.1	2022-04-07 00:39:10 +00:00
py-thewalrus	science/py-thewalrus: New port: Open source library for hafnian calculation	2022-05-31 20:42:38 -07:00
py-tobler	science/py-tobler: Update to 0.9.0	2022-03-08 02:11:26 +08:00
py-trainstation	science/py-trainstation: New port: Convenient training of linear models	2022-03-07 12:14:14 -08:00
py-veusz	devel/py-qt5, devel/py-sip: Update versions	2022-03-07 18:39:13 +01:00
pybrain
pynn	science/pynn: Update to 0.10.0	2021-12-17 16:18:50 +08:00
q	science/q: New port: Molecular Dynamics (MD) tools	2022-05-23 18:54:08 -07:00
qbox	science/qbox: Update 1.74.1 -> 1.74.2	2022-03-26 19:40:09 -07:00
qcl
qiskit-aer
qmcpack	*/*: Replace science/szip with science/libaec	2022-06-16 23:13:01 +08:00
quantum-espresso
quantum-espresso-pseudopotentials
quantum-jet	science/quantum-jet: New port: Cross-platform header-only library for simulating quantum circuits	2022-05-31 13:02:18 -07:00
qwalk	textproc/libxml2: bump all LIB_DEPENDS consumers	2022-04-10 15:11:41 -04:00
R-cran-AMORE
R-cran-bayesm
R-cran-cmprsk	science/R-cran-cmprsk: Update to 2.2-11	2022-01-09 06:54:19 +00:00
R-cran-DCluster	science/R-cran-DCluster: Update to 0.2-8	2022-06-09 12:51:21 +00:00
R-cran-e1071	science/R-cran-e1071: Update to 1.7-11	2022-06-09 23:10:44 +00:00
R-cran-eco
R-cran-Epi	science/R-cran-Epi: Update to 2.46	2022-04-17 06:22:10 +00:00
R-cran-epicalc
R-cran-etm
R-cran-FAdist	science/R-cran-FAdist: upgrade to 2.4	2022-03-06 21:56:52 +01:00
R-cran-fastICA	science/R-cran-fastICA: Update to 1.2-3	2021-09-25 18:13:13 -04:00
R-cran-kernlab	science/R-cran-kernlab: Update to 0.9-31	2022-06-10 02:05:52 +00:00
R-cran-ks	science/R-cran-ks: adding a R library for Kernel Smoothing	2022-05-06 17:32:19 +02:00
R-cran-snow	science/R-cran-snow: Update to 0.4-4	2021-10-28 10:20:03 +00:00
R-cran-som
R-cran-udunits2	science/R-cran-udunits2: Update to 0.13.2.1	2022-03-15 23:22:57 +00:00
rdkit	science/rdkit: Update 2022.03.2 -> 2022.03.3	2022-06-03 00:17:04 -07:00
rmf	*/*: Replace science/szip with science/libaec	2022-06-16 23:13:01 +08:00
rubygem-ai4r
rubygem-cdo
rubygem-rgeo	science/rubygem-rgeo: Update to 2.4.0	2022-01-26 03:51:05 +08:00
rubygem-rgeo-geojson
rubygem-rgeo-proj4	science/rubygem-rgeo-proj4: Update to 3.1.1	2021-11-22 02:24:31 +08:00
rubygem-rgeo-shapefile
rubygem-ruby-dcl
rubygem-ruby-netcdf	science/rubygem-ruby-netcdf: Update to 0.8.0	2022-03-31 06:21:46 +08:00
scidavis	science/scidavis: tell portscout to ignore old tag	2022-05-10 21:31:45 +03:00
segyio	devel/cmake: Update to 3.23.0	2022-05-16 08:49:43 +02:00
shelxle	science/shelxle: Update 1.0.1395 -> 1.0.1396	2022-06-26 00:20:17 -07:00
siconos	cleanup: drop support for EOL FreeBSD 11.X	2021-09-30 23:23:30 +02:00
siesta	science/siesta: Add comment	2022-06-19 00:44:10 -07:00
sigrok-cli	science/sigrok-cli: Update version 0.7.1=>0.7.2	2022-06-06 16:56:48 -05:00
sigrok-firmware	all: Take maintainership	2022-06-06 06:48:06 -05:00
sigrok-firmware-fx2lafw	all: Take maintainership	2022-06-06 06:48:06 -05:00
sigrok-firmware-utils	all: Take maintainership	2022-06-06 06:48:06 -05:00
silo	science/silo: Fix build with HDF5 1.10.8+	2022-06-16 23:13:02 +08:00
simbody
simgrid	devel/boost-all: bump all library consumers after boost upgrade	2022-05-22 23:17:16 +03:00
simint
simlib
simple-dftd3	science/simple-dftd3: Update 0.5.1 -> 0.6.0	2022-04-30 12:48:30 -07:00
simsmith
smoldyn	science/smoldyn: Update 2.66 -> 2.67	2021-11-06 16:56:37 -07:00
sparta	science/sparta: Update 20Oct2021 -> 7Jan2022	2022-01-08 01:09:25 -08:00
spglib	science/spglib: fix build without libomp	2022-05-31 03:05:56 +00:00
step	KDE: Update KDE Gear to 22.04.3	2022-07-07 23:50:27 +02:00
svmlight	science/svmlight: fix build on 13.0+	2021-10-29 18:01:10 +00:00
tblite	science/tblite: Broken on systems where OpenMP isn't enabled	2022-07-24 03:25:02 -07:00
teem
tfel	devel/boost-all: bump all library consumers after boost upgrade	2022-05-22 23:17:16 +03:00
tfel-edf	devel/boost-all: bump all library consumers after boost upgrade	2022-05-22 23:17:16 +03:00
thermofun	science/thermofun: Update 0.3.8 -> 0.3.9	2022-01-18 10:42:45 -08:00
tinker	science/tinker: don't set -march=native	2022-05-22 00:10:44 +00:00
udunits
ukrmol+	science/ukrmol+: Broken on aarch64	2022-06-03 11:23:35 -07:00
v_sim	science/netcdf: Update to 4.8.1	2022-03-08 02:10:58 +08:00
vipster
vmd	science/netcdf: Update to 4.8.1	2022-03-08 02:10:58 +08:00
voro++
votca	*/*: Replace science/szip with science/libaec	2022-06-16 23:13:01 +08:00
wannier90
wwplot
wxmacmolplt
xcfun
xcrysden	framework: Add new USES 'magick' for graphics/ImageMagick*	2021-12-11 14:50:53 +01:00
xdrawchem
xtb	science/xtb: Broken on systems where OpenMP isn't enabled	2022-08-04 00:43:35 -07:00
yoda	science/yoda: Update 1.9.4 -> 1.9.6	2022-08-23 20:45:14 -07:00
zotero	devel/libffi: Bump deps PORTREVISION for shlib change	2022-05-09 12:23:51 -07:00
Makefile	science/py-cirq-rigetti: New port: Cirq module to run on Rigetti quantum computers	2022-07-01 18:55:15 -07:00