*/*: Replace science/szip with science/libaec
- Bump PORTREVISION of dependent ports for dependency change szip does not allow redistribution in binary form without proper commercial license. Its LICENSE_PERMS should be set to no-auto-accept which blocks building this port, therefore building dependent ports are also blocked. Switch all dependent ports to science/libaec to avoid conflicts and license issue. PR: 228743, 246097, 250165
This commit is contained in:
Po-Chuan Hsieh
parent
72fa35d5cb
commit
328ae40742
@ -1,5 +1,6 @@
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PORTNAME= OSKAR
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DISTVERSION= 2.8.3
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PORTREVISION= 1
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CATEGORIES= astro
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MAINTAINER= yuri@FreeBSD.org
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@ -14,7 +15,7 @@ BROKEN_FreeBSD_12_powerpc64= fails to compile: oskar_convert_cirs_relative_direc
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LIB_DEPENDS= libcfitsio.so:astro/cfitsio \
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libhdf5.so:science/hdf5 \
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libsz.so:science/szip
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libsz.so:science/libaec
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USES= cmake compiler:c++11-lang localbase:ldflags python qt:5 \
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shebangfix
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@ -2,7 +2,7 @@
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PORTNAME= csound
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DISTVERSION= 6.15.0
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PORTREVISION= 3
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PORTREVISION= 4
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CATEGORIES= audio lang
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MAINTAINER= yuri@FreeBSD.org
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@ -91,7 +91,7 @@ FLUIDSYNTH_BROKEN= FluidSynth 2.x is broken upstream: https://github.com/csound/
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HDF5_DESC= Build HDF5 read/write plugin
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HDF5_LIB_DEPENDS= libhdf5.so:science/hdf5 \
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libsz.so:science/szip
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libsz.so:science/libaec
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HDF5_CMAKE_BOOL= BUILD_HDF5_OPCODES
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JACK_DESC= Build the JACK related opcodes
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@ -1,6 +1,7 @@
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PORTNAME= kallisto
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DISTVERSIONPREFIX= v
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DISTVERSION= 0.48.0
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PORTREVISION= 1
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PORTEPOCH= 1
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CATEGORIES= biology
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@ -12,7 +13,7 @@ LICENSE_FILE= ${WRKSRC}/license.txt
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BUILD_DEPENDS= autoconf>=0:devel/autoconf
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LIB_DEPENDS= libhdf5.so:science/hdf5 \
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libsz.so:science/szip \
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libsz.so:science/libaec \
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libhts.so:biology/htslib
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USES= cmake:noninja compiler:c++11-lang gmake localbase:ldflags
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@ -1,6 +1,7 @@
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PORTNAME= appcsxcad
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DISTVERSIONPREFIX= v
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DISTVERSION= 0.2.2-7
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PORTREVISION= 1
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DISTVERSIONSUFFIX= -gde8c271
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CATEGORIES= cad
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@ -18,7 +19,7 @@ LIB_DEPENDS= \
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libhdf5.so:science/hdf5 \
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libpng16.so:graphics/png \
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libQCSXCAD.so:cad/qcsxcad \
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libsz.so:science/szip \
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libsz.so:science/libaec \
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libtiff.so:graphics/tiff \
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libvtkCommonCore-8.2.so:math/vtk8 # some related packages don't support vtk9 yet, see https://github.com/thliebig/QCSXCAD/issues/6#issuecomment-901633240
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@ -2,7 +2,7 @@ PORTNAME= csxcad
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DISTVERSIONPREFIX= v
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DISTVERSION= 0.6.2-103
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DISTVERSIONSUFFIX= -g3c4fb66
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PORTREVISION= 3
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PORTREVISION= 4
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CATEGORIES= cad
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MAINTAINER= yuri@FreeBSD.org
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@ -19,7 +19,7 @@ LIB_DEPENDS= libboost_system.so:devel/boost-libs \
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libhdf5.so:science/hdf5 \
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libmpfr.so:math/mpfr \
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libpng16.so:graphics/png \
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libsz.so:science/szip \
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libsz.so:science/libaec \
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libtiff.so:graphics/tiff \
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libtinyxml.so:textproc/tinyxml \
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libvtkCommonCore-8.2.so:math/vtk8 # some related packages don't support vtk9 yet, see https://github.com/thliebig/QCSXCAD/issues/6#issuecomment-901633240
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@ -2,6 +2,7 @@
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PORTNAME= gmsh
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DISTVERSION= 4.9.2
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PORTREVISION= 1
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CATEGORIES= cad
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MASTER_SITES= http://gmsh.info/src/
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DISTNAME= ${PORTNAME}-${PORTVERSION}-source
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@ -18,7 +19,7 @@ LIB_DEPENDS= libfltk.so:x11-toolkits/fltk \
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libgmp.so:math/gmp \
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libhdf5.so:science/hdf5 \
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libpng.so:graphics/png \
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libsz.so:science/szip \
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libsz.so:science/libaec \
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libfreetype.so:print/freetype2
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RUN_DEPENDS= getdp:science/getdp
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@ -2,6 +2,7 @@
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PORTNAME= alembic
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PORTVERSION= 1.8.3
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PORTREVISION= 1
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CATEGORIES= graphics
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MAINTAINER= danfe@FreeBSD.org
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@ -10,7 +11,7 @@ COMMENT= Open framework for storing and sharing graphic scene data
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LICENSE= BSD3CLAUSE
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LIB_DEPENDS= libImath.so:math/Imath
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LIB_DEPENDS+= libsz.so:science/szip
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LIB_DEPENDS+= libsz.so:science/libaec
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USES= cmake compiler:c++11-lang
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USE_CXXSTD= c++11
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@ -2,6 +2,7 @@
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PORTNAME= qgis
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DISTVERSION= 3.22.7
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PORTREVISION= 1
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CATEGORIES= graphics geography
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MASTER_SITES= https://qgis.org/downloads/
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PKGNAMESUFFIX= -ltr
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@ -52,7 +53,7 @@ LIB_DEPENDS= libexiv2.so:graphics/exiv2 \
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libqwt6.so:x11-toolkits/qwt6 \
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libspatialindex.so:devel/spatialindex \
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libspatialite.so:databases/spatialite \
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libsz.so:science/szip \
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libsz.so:science/libaec \
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libxerces-c.so:textproc/xerces-c3 \
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libzip.so:archivers/libzip \
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libzstd.so:archivers/zstd
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@ -2,6 +2,7 @@
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PORTNAME= qgis
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DISTVERSION= 3.24.3
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PORTREVISION= 1
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CATEGORIES= graphics geography
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MASTER_SITES= https://qgis.org/downloads/
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@ -51,7 +52,7 @@ LIB_DEPENDS= libexiv2.so:graphics/exiv2 \
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libqwt6.so:x11-toolkits/qwt6 \
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libspatialindex.so:devel/spatialindex \
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libspatialite.so:databases/spatialite \
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libsz.so:science/szip \
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libsz.so:science/libaec \
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libxerces-c.so:textproc/xerces-c3 \
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libzip.so:archivers/libzip \
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libzstd.so:archivers/zstd
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@ -3,7 +3,7 @@
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PORTNAME= vigra
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DISTVERSIONPREFIX=v
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DISTVERSION= 1.11.1
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PORTREVISION= 20
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PORTREVISION= 21
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CATEGORIES= graphics
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MAINTAINER= ports@FreeBSD.org
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@ -13,7 +13,7 @@ LICENSE= MIT
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LICENSE_FILE= ${WRKSRC}/LICENSE.txt
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LIB_DEPENDS= libImath.so:math/Imath \
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libsz.so:science/szip
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libsz.so:science/libaec
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USES= cmake compiler:c++14-lang python:run shebangfix
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USE_GITHUB= yes
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@ -2,7 +2,7 @@ PORTNAME= vv
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DISTVERSIONPREFIX= v
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DISTVERSION= 1.4.0-383
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DISTVERSIONSUFFIX= -g7a783a8b
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PORTREVISION= 2
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PORTREVISION= 3
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CATEGORIES= graphics
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MAINTAINER= yuri@FreeBSD.org
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@ -18,7 +18,7 @@ LIB_DEPENDS= libexpat.so:textproc/expat2 \
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libhdf5_cpp.so:science/hdf5 \
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libITKLabelMap-5.0.so:science/InsightToolkit \
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libpng.so:graphics/png \
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libsz.so:science/szip \
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libsz.so:science/libaec \
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libtiff.so:graphics/tiff \
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libvtkIOSQL-8.2.so:math/vtk8
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@ -1,6 +1,7 @@
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PORTNAME= ambit
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DISTVERSIONPREFIX= v
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DISTVERSION= 0.6
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PORTREVISION= 1
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CATEGORIES= math
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PKGNAMESUFFIX= -tensor # avoid clash with shells/ambit
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@ -12,7 +13,7 @@ LICENSE_FILE= ${WRKSRC}/COPYING
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LIB_DEPENDS= libhdf5.so:science/hdf5 \
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libopenblas.so:math/openblas \
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libsz.so:science/szip
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libsz.so:science/libaec
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USES= cmake:testing compiler:c++11-lang python:build
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USE_LDCONFIG= yes
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@ -1,5 +1,6 @@
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PORTNAME= armadillo
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PORTVERSION= 11.2.0
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PORTREVISION= 1
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CATEGORIES= math
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MASTER_SITES= SF/arma
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@ -14,7 +15,7 @@ LIB_DEPENDS= libarpack.so:math/arpack-ng \
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libhdf5.so:science/hdf5 \
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liblapack.so:math/lapack \
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libsuperlu.so:math/superlu \
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libsz.so:science/szip
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libsz.so:science/libaec
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USES= blaslapack:openblas cmake compiler:c++11-lang pkgconfig tar:xz
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@ -1,5 +1,6 @@
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PORTNAME= flann
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DISTVERSION= 1.9.2
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PORTREVISION= 1
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CATEGORIES= math
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MAINTAINER= yuri@FreeBSD.org
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@ -10,7 +11,7 @@ LICENSE_FILE= ${WRKSRC}/COPYING
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LIB_DEPENDS= libhdf5.so:science/hdf5 \
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liblz4.so:archivers/liblz4 \
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libsz.so:science/szip
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libsz.so:science/libaec
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USES= cmake compiler:c++11-lang localbase:ldflags pkgconfig
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USE_LDCONFIG= yes
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@ -3,6 +3,7 @@
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PORTNAME= freefem++
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DISTVERSIONPREFIX= v
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DISTVERSION= 4.11
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PORTREVISION= 1
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CATEGORIES= math science
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MAINTAINER= yuri@FreeBSD.org
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@ -28,7 +29,7 @@ LIB_DEPENDS= libhdf5.so:science/hdf5 \
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libcmumps.so:math/mumps \
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libnlopt.so:math/nlopt \
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libsuperlu.so:math/superlu \
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libsz.so:science/szip
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libsz.so:science/libaec
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RUN_DEPENDS= bash:shells/bash \
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pipe:misc/pipe
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@ -2,7 +2,7 @@
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PORTNAME= labplot
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DISTVERSION= 2.8.2
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PORTREVISION= 16
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PORTREVISION= 17
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CATEGORIES= math kde
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MASTER_SITES= KDE/stable/${PORTNAME}/${PORTVERSION}
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@ -19,7 +19,7 @@ LICENSE_FILE= ${WRKSRC}/COPYING
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LIB_DEPENDS= libgsl.so:math/gsl \
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liblz4.so:archivers/liblz4 \
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libspectre.so:print/libspectre \
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libsz.so:science/szip
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libsz.so:science/libaec
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USES= bison cmake compiler:c++11-lang desktop-file-utils kde:5 qt:5 \
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shared-mime-info tar:xz
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@ -1,6 +1,6 @@
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PORTNAME= mathgl
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DISTVERSION= 2.5
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PORTREVISION= 1
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PORTREVISION= 2
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CATEGORIES= math graphics
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MASTER_SITES= SF/${PORTNAME}/${PORTNAME}/${PORTNAME}%20${PORTVERSION}/
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@ -16,7 +16,7 @@ LIB_DEPENDS= libgif.so:graphics/giflib \
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libhpdf.so:print/libharu \
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libltdl.so:devel/libltdl \
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libpng.so:graphics/png \
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libsz.so:science/szip
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libsz.so:science/libaec
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USES= cmake compiler:c++11-lang gettext-runtime gl jpeg xorg
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USE_GL= gl glu glut
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@ -2,6 +2,7 @@
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PORTNAME= mdal
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DISTVERSION= 0.9.4
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PORTREVISION= 1
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CATEGORIES= math geography
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MAINTAINER= wen@FreeBSD.org
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@ -16,7 +17,7 @@ LIB_DEPENDS= libpdal_base.so:math/pdal \
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libsqlite3.so:databases/sqlite3 \
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libgdal.so:graphics/gdal \
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libhdf5.so:science/hdf5 \
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libsz.so:science/szip
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libsz.so:science/libaec
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USES= cmake gnome localbase
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USE_GNOME= libxml2
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@ -1,7 +1,7 @@
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PORTNAME= openturns
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DISTVERSIONPREFIX= v
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DISTVERSION= 1.19
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PORTREVISION= 1
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PORTREVISION= 2
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CATEGORIES= math
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MAINTAINER= yuri@FreeBSD.org
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@ -48,7 +48,7 @@ LIB_DEPENDS= libamd.so:math/suitesparse-amd \
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libprimesieve.so:math/primesieve \
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libspqr.so:math/suitesparse-spqr \
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libsuitesparseconfig.so:math/suitesparse-config \
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libsz.so:science/szip \
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libsz.so:science/libaec \
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libtbb.so:devel/onetbb \
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libunwind.so:devel/libunwind
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@ -2,7 +2,7 @@
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PORTNAME= pdal
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DISTVERSION= 2.3.0
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PORTREVISION= 6
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PORTREVISION= 7
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CATEGORIES= math databases graphics
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MASTER_SITES= https://github.com/PDAL/PDAL/releases/download/${DISTVERSION}/
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DISTNAME= ${PORTNAME}-${DISTVERSION}-src
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@ -59,7 +59,7 @@ BASH_RUN_DEPENDS= bash:shells/bash
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ICEBRIDGE_CMAKE_BOOL= BUILD_PLUGIN_ICEBRIDGE
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ICEBRIDGE_LIB_DEPENDS= libhdf5.so:science/hdf5 \
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libsz.so:science/szip
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libsz.so:science/libaec
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LAZPERF_CMAKE_BOOL= WITH_LAZPERF
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LAZPERF_LIB_DEPENDS= liblazperf.so:archivers/lazperf
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@ -2,6 +2,7 @@
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PORTNAME= saga
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PORTVERSION= 8.2.2
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PORTREVISION= 1
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CATEGORIES= math
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MASTER_SITES= SF/saga-gis/SAGA%20-%20${PORTVERSION:C/\.[[:digit:]]\.[[:digit:]]*$//}/SAGA%20-%20${PORTVERSION}
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@ -25,7 +26,7 @@ LIB_DEPENDS= libcurl.so:ftp/curl \
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libproj.so:graphics/proj \
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libqhull_r.so:math/qhull \
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libsvm.so:science/libsvm \
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libsz.so:science/szip \
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libsz.so:science/libaec \
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libtiff.so:graphics/tiff
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RUN_DEPENDS:= swig:devel/swig
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@ -1,6 +1,7 @@
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PORTNAME= adios2
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DISTVERSIONPREFIX= v
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DISTVERSION= 2.8.1
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PORTREVISION= 1
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CATEGORIES= misc science
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MAINTAINER= yuri@FreeBSD.org
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@ -26,7 +27,7 @@ LIB_DEPENDS= libblosc.so:archivers/c-blosc \
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libmpi.so:net/mpich \
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libpng.so:graphics/png \
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libsodium.so:security/libsodium \
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libsz.so:science/szip \
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libsz.so:science/libaec \
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libzmq.so:net/libzmq4 \
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libzfp.so:devel/zfp
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RUN_DEPENDS= bash:shells/bash \
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@ -1,7 +1,7 @@
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PORTNAME= ALPSCore
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DISTVERSIONPREFIX= v
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DISTVERSION= 2.2.0
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PORTREVISION= 14
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PORTREVISION= 15
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CATEGORIES= science
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MAINTAINER= ports@FreeBSD.org
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@ -14,7 +14,7 @@ BROKEN_i386= fails to build: no matching member function for call to 'read'
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LIB_DEPENDS= libboost_system.so:devel/boost-libs \
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libhdf5.so:science/hdf5 \
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libsz.so:science/szip
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libsz.so:science/libaec
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USES= cmake compiler:c++11-lang eigen:3
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USE_GITHUB= yes
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@ -3,7 +3,7 @@
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PORTNAME= InsightToolkit
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PORTVERSION= 5.0.1
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DISTVERSIONPREFIX=v
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PORTREVISION= 7
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PORTREVISION= 8
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CATEGORIES= science biology
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MASTER_SITES= https://github.com/InsightSoftwareConsortium/ITK/releases/download/v5.0.1/:data
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DISTFILES= InsightData-5.0.1.tar.gz:data
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@ -19,7 +19,7 @@ LIB_DEPENDS= libgdcmCommon.so:devel/gdcm \
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libfftw.so:math/fftw \
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libhdf5.so:science/hdf5 \
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libpng.so:graphics/png \
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libsz.so:science/szip \
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libsz.so:science/libaec \
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libtiff.so:graphics/tiff
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USES= cmake compiler:c++11-lang eigen:3 jpeg pkgconfig
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@ -2,7 +2,7 @@
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PORTNAME= abinit
|
||||
DISTVERSION= 9.4.2
|
||||
PORTREVISION= 4
|
||||
PORTREVISION= 5
|
||||
CATEGORIES= science
|
||||
|
||||
MAINTAINER= yuri@FreeBSD.org
|
||||
@ -19,7 +19,7 @@ BUILD_DEPENDS= gm4:devel/m4 \
|
||||
${PYTHON_PKGNAMEPREFIX}pandas>0:math/py-pandas@${PY_FLAVOR} \
|
||||
${PYTHON_PKGNAMEPREFIX}graphviz>0:graphics/py-graphviz@${PY_FLAVOR}
|
||||
LIB_DEPENDS= libelpa.so:math/elpa \
|
||||
libsz.so:science/szip \
|
||||
libsz.so:science/libaec \
|
||||
libelpa.so:math/elpa \
|
||||
libxc.so:science/libxc \
|
||||
libfftw3.so:math/fftw3 \
|
||||
|
||||
@ -1,6 +1,7 @@
|
||||
PORTNAME= ascent
|
||||
DISTVERSIONPREFIX= v
|
||||
DISTVERSION= 0.8.0
|
||||
PORTREVISION= 1
|
||||
CATEGORIES= science
|
||||
PKGNAMESUFFIX= -visualizer
|
||||
|
||||
@ -14,7 +15,7 @@ LIB_DEPENDS= libconduit.so:science/conduit \
|
||||
libhdf5.so:science/hdf5 \
|
||||
libsiloh5.so:science/silo \
|
||||
libsysinfo.so:devel/libsysinfo \
|
||||
libsz.so:science/szip
|
||||
libsz.so:science/libaec
|
||||
|
||||
USES= cmake:testing compiler:c++11-lang fortran localbase:ldflags
|
||||
|
||||
|
||||
@ -1,5 +1,6 @@
|
||||
PORTNAME= avogadrolibs
|
||||
DISTVERSION= 1.95.1
|
||||
PORTREVISION= 1
|
||||
CATEGORIES= science
|
||||
|
||||
MAINTAINER= yuri@FreeBSD.org
|
||||
@ -27,7 +28,7 @@ OPTIONS_SUB= yes
|
||||
|
||||
HDF5_CMAKE_BOOL= USE_HDF5
|
||||
HDF5_LIB_DEPENDS= libhdf5.so:science/hdf5 \
|
||||
libsz.so:science/szip
|
||||
libsz.so:science/libaec
|
||||
|
||||
LIBARCHIVE_DESC= Enable optional Libarchive features
|
||||
LIBARCHIVE_CMAKE_BOOL= USE_LIBARCHIVE
|
||||
|
||||
@ -1,6 +1,7 @@
|
||||
PORTNAME= axom
|
||||
DISTVERSIONPREFIX= v
|
||||
DISTVERSION= 0.6.1
|
||||
PORTREVISION= 1
|
||||
CATEGORIES= science
|
||||
|
||||
MAINTAINER= yuri@FreeBSD.org
|
||||
@ -15,7 +16,7 @@ BROKEN_powerpc= https://github.com/LLNL/axom/issues/743
|
||||
LIB_DEPENDS= libconduit.so:science/conduit \
|
||||
libhdf5.so:science/hdf5 \
|
||||
libsiloh5.so:science/silo \
|
||||
libsz.so:science/szip
|
||||
libsz.so:science/libaec
|
||||
RUN_DEPENDS= sparsehash>0:devel/sparsehash
|
||||
|
||||
USES= cmake compiler:c++11-lang
|
||||
|
||||
@ -2,6 +2,7 @@
|
||||
|
||||
PORTNAME= cdo
|
||||
PORTVERSION= 2.0.5
|
||||
PORTREVISION= 1
|
||||
CATEGORIES= science
|
||||
MASTER_SITES= https://code.mpimet.mpg.de/attachments/download/26823/ \
|
||||
LOCAL/sunpoet
|
||||
@ -54,7 +55,7 @@ NETCDF_LIB_DEPENDS= libnetcdf.so:science/netcdf
|
||||
PROJ_CONFIGURE_WITH= proj
|
||||
PROJ_LIB_DEPENDS= libproj.so:graphics/proj
|
||||
SZIP_CONFIGURE_WITH= szlib
|
||||
SZIP_LIB_DEPENDS= libsz.so:science/szip
|
||||
SZIP_LIB_DEPENDS= libsz.so:science/libaec
|
||||
UDUNITS_CONFIGURE_WITH= udunits2
|
||||
UDUNITS_LIB_DEPENDS= libudunits2.so:science/udunits
|
||||
UUID_CONFIGURE_OFF= ac_cv_func_uuid_create=no ac_cv_have_decl_uuid_create=no ac_cv_have_decl_uuid_generate=no ac_cv_lib_uuid_uuid_generate=no
|
||||
|
||||
@ -3,6 +3,7 @@
|
||||
PORTNAME= cgnslib
|
||||
PORTVERSION= 4.3.0
|
||||
DISTVERSIONPREFIX= v
|
||||
PORTREVISION= 1
|
||||
PORTEPOCH= 1
|
||||
CATEGORIES= science
|
||||
|
||||
@ -37,7 +38,8 @@ TOOLS_DESC= Build the CGNSTools package
|
||||
FORTRAN_USES= fortran
|
||||
FORTRAN_CMAKE_BOOL= CGNS_ENABLE_FORTRAN
|
||||
|
||||
HDF5_LIB_DEPENDS= libhdf5.so:science/hdf5 libsz.so:science/szip
|
||||
HDF5_LIB_DEPENDS= libhdf5.so:science/hdf5 \
|
||||
libsz.so:science/libaec
|
||||
HDF5_CMAKE_BOOL= CGNS_ENABLE_HDF5
|
||||
HDF5_CMAKE_ON= -DHDF5_INCLUDE_PATH:PATH="${LOCALBASE}/include"
|
||||
|
||||
|
||||
@ -2,7 +2,7 @@
|
||||
|
||||
PORTNAME= cgribex
|
||||
PORTVERSION= 1.9.4
|
||||
PORTREVISION= 1
|
||||
PORTREVISION= 2
|
||||
CATEGORIES= science
|
||||
MASTER_SITES= https://code.mpimet.mpg.de/attachments/download/21178/ \
|
||||
LOCAL/sunpoet
|
||||
@ -28,7 +28,7 @@ GRIB_API_LIB_DEPENDS= libgrib_api.so:science/grib_api
|
||||
JASPER_CONFIGURE_WITH= jasper=${LOCALBASE}
|
||||
JASPER_LIB_DEPENDS= libjasper.so:graphics/jasper
|
||||
SZIP_CONFIGURE_WITH= szlib=${LOCALBASE}
|
||||
SZIP_LIB_DEPENDS= libsz.so:science/szip
|
||||
SZIP_LIB_DEPENDS= libsz.so:science/libaec
|
||||
|
||||
post-configure:
|
||||
@${REINPLACE_CMD} -e 's|-Ino/include||g; s|-Lno/lib||g' ${WRKSRC}/Makefile ${WRKSRC}/*/Makefile
|
||||
|
||||
@ -1,6 +1,7 @@
|
||||
PORTNAME= CheMPS2
|
||||
DISTVERSIONPREFIX= v
|
||||
DISTVERSION= 1.8.12
|
||||
PORTREVISION= 1
|
||||
CATEGORIES= science
|
||||
|
||||
MAINTAINER= yuri@FreeBSD.org
|
||||
@ -10,7 +11,7 @@ LICENSE= GPLv2
|
||||
LICENSE_FILE= ${WRKSRC}/LICENSE
|
||||
|
||||
LIB_DEPENDS= libhdf5.so:science/hdf5 \
|
||||
libsz.so:science/szip
|
||||
libsz.so:science/libaec
|
||||
|
||||
USES= blaslapack:openblas cmake fortran
|
||||
USE_LDCONFIG= yes
|
||||
|
||||
@ -1,6 +1,6 @@
|
||||
PORTNAME= chrono
|
||||
DISTVERSION= 7.0.3
|
||||
PORTREVISION= 1
|
||||
PORTREVISION= 2
|
||||
CATEGORIES= science devel
|
||||
PKGNAMESUFFIX= -physics-simulation-engine
|
||||
|
||||
@ -84,7 +84,7 @@ OPENGL_USE= GL=gl,glu,glew
|
||||
OPENGL_BUILD_DEPENDS= ${LOCALBASE}/include/glm/glm.hpp:math/glm
|
||||
OPENGL_LIB_DEPENDS= libglfw.so:graphics/glfw
|
||||
|
||||
VEHICLE_LIB_DEPENDS= libsz.so:science/szip \
|
||||
VEHICLE_LIB_DEPENDS= libsz.so:science/libaec \
|
||||
libmpi.so:net/openmpi
|
||||
|
||||
.for module in ${ALL_MODULES}
|
||||
|
||||
@ -1,6 +1,7 @@
|
||||
PORTNAME= conduit
|
||||
DISTVERSIONPREFIX= v
|
||||
DISTVERSION= 0.8.3
|
||||
PORTREVISION= 1
|
||||
CATEGORIES= science
|
||||
|
||||
MAINTAINER= yuri@FreeBSD.org
|
||||
@ -12,7 +13,7 @@ LICENSE_FILE= ${WRKSRC}/../LICENSE
|
||||
LIB_DEPENDS= libhdf5.so:science/hdf5 \
|
||||
libmpi_cxx.so:net/openmpi \
|
||||
libsiloh5.so:science/silo \
|
||||
libsz.so:science/szip
|
||||
libsz.so:science/libaec
|
||||
|
||||
USES= cmake:testing compiler:c++11-lang fortran
|
||||
USE_LDCONFIG= yes
|
||||
|
||||
@ -1,6 +1,6 @@
|
||||
PORTNAME= dakota
|
||||
DISTVERSION= 6.15.0
|
||||
PORTREVISION= 1
|
||||
PORTREVISION= 2
|
||||
CATEGORIES= science
|
||||
MASTER_SITES= https://dakota.sandia.gov/sites/default/files/distributions/public/
|
||||
DISTNAME= ${PORTNAME}-${DISTVERSION}-public-src-cli
|
||||
@ -19,7 +19,7 @@ LIB_DEPENDS= libblas.so:math/blas \
|
||||
libhdf5.so:science/hdf5 \
|
||||
liblapack.so:math/lapack \
|
||||
libnlopt.so:math/nlopt \
|
||||
libsz.so:science/szip
|
||||
libsz.so:science/libaec
|
||||
RUN_DEPENDS= bash:shells/bash
|
||||
|
||||
USES= cmake compiler:c++11-lang fortran motif perl5 pkgconfig python shebangfix xorg
|
||||
|
||||
@ -1,5 +1,6 @@
|
||||
PORTNAME= dynare
|
||||
DISTVERSION= 5.1
|
||||
PORTREVISION= 1
|
||||
CATEGORIES= science # economics
|
||||
MASTER_SITES= https://www.dynare.org/release/source/
|
||||
|
||||
@ -15,7 +16,7 @@ BUILD_DEPENDS= ${LOCALBASE}/include/boost/tokenizer.hpp:devel/boost-libs
|
||||
LIB_DEPENDS= libhdf5.so:science/hdf5 \
|
||||
libmatio.so:math/matio \
|
||||
libopenblas.so:math/openblas \
|
||||
libsz.so:science/szip
|
||||
libsz.so:science/libaec
|
||||
RUN_DEPENDS= epstool:graphics/epstool \
|
||||
gnuplot:math/gnuplot \
|
||||
pstoedit:graphics/pstoedit \
|
||||
|
||||
@ -1,5 +1,6 @@
|
||||
PORTNAME= erkale
|
||||
DISTVERSION= g20220405
|
||||
PORTREVISION= 1
|
||||
CATEGORIES= science
|
||||
|
||||
MAINTAINER= yuri@FreeBSD.org
|
||||
@ -15,7 +16,7 @@ LIB_DEPENDS= libderiv.so:science/libint \
|
||||
libgsl.so:math/gsl \
|
||||
libhdf5.so:science/hdf5 \
|
||||
libint.so:science/libint \
|
||||
libsz.so:science/szip \
|
||||
libsz.so:science/libaec \
|
||||
libxc.so:science/libxc
|
||||
RUN_DEPENDS= ${LOCALBASE}/share/erkale/basis/6-21G.gbs:science/erkale-pseudopotentials
|
||||
|
||||
|
||||
@ -3,7 +3,7 @@
|
||||
PORTNAME= gnudatalanguage
|
||||
PORTVERSION= 1.0.1
|
||||
DISTVERSIONPREFIX= v
|
||||
PORTREVISION= 2
|
||||
PORTREVISION= 3
|
||||
CATEGORIES= science lang
|
||||
.if defined(BUILD_PYTHON_MODULE)
|
||||
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
|
||||
@ -20,7 +20,7 @@ LIB_DEPENDS+= libgeotiff.so:graphics/libgeotiff\
|
||||
libtiff.so:graphics/tiff \
|
||||
libshp.so:devel/shapelib \
|
||||
libpng.so:graphics/png \
|
||||
libsz.so:science/szip \
|
||||
libsz.so:science/libaec \
|
||||
libps.so:print/pslib \
|
||||
libgsl.so:math/gsl
|
||||
|
||||
|
||||
@ -2,6 +2,7 @@
|
||||
|
||||
PORTNAME= hdf
|
||||
PORTVERSION= 4.2.15
|
||||
PORTREVISION= 1
|
||||
PORTEPOCH= 1
|
||||
CATEGORIES= science archivers graphics
|
||||
MASTER_SITES= http://www.hdfgroup.org/ftp/HDF/releases/HDF${PORTVERSION}/src/ \
|
||||
@ -13,7 +14,7 @@ COMMENT= Hierarchical Data Format library (from NCSA)
|
||||
NOT_FOR_ARCHS= aarch64 armv6 armv7
|
||||
NOT_FOR_ARCHS_REASON= fails to compile: no machine type has been defined
|
||||
|
||||
LIB_DEPENDS= libsz.so:science/szip
|
||||
LIB_DEPENDS= libsz.so:science/libaec
|
||||
|
||||
CONFLICTS_INSTALL= netcdf-4.[0-9]*
|
||||
|
||||
|
||||
@ -2,7 +2,7 @@
|
||||
|
||||
PORTNAME= hdf5
|
||||
PORTVERSION= 1.8.21 # When PORTVERSION changes, please update french/med/files/patch-configure
|
||||
PORTREVISION= 3
|
||||
PORTREVISION= 4
|
||||
CATEGORIES= science archivers graphics
|
||||
MASTER_SITES= https://support.hdfgroup.org/ftp/HDF5/releases/hdf5-1.8/${PORTNAME}-${PORTVERSION}/src/ \
|
||||
http://support.hdfgroup.org/ftp/HDF5/releases/hdf5-1.8/${PORTNAME}-${PORTVERSION}/src/ \
|
||||
@ -52,7 +52,7 @@ PLIST_SUB+= FORTRAN="@comment "
|
||||
.endif
|
||||
|
||||
.if ${PORT_OPTIONS:MSZIP}
|
||||
LIB_DEPENDS+= libsz.so:science/szip
|
||||
LIB_DEPENDS+= libsz.so:science/libaec
|
||||
CONFIGURE_ARGS+=--with-szlib=${LOCALBASE}
|
||||
.endif
|
||||
|
||||
|
||||
@ -2,6 +2,7 @@
|
||||
|
||||
PORTNAME= hdf5
|
||||
PORTVERSION= 1.10.6
|
||||
PORTREVISION= 1
|
||||
PORTEPOCH= 1
|
||||
CATEGORIES= science archivers graphics
|
||||
MASTER_SITES= https://support.hdfgroup.org/ftp/HDF5/releases/hdf5-${PORTVERSION:R}/${DISTNAME}/src/ \
|
||||
@ -45,7 +46,7 @@ PARALLEL_CONFIGURE_ENABLE= parallel
|
||||
PARALLEL_LDFLAGS= -L${LOCALBASE}/lib -lmpi
|
||||
PARALLEL_LIB_DEPENDS= libmpi.so:net/mpich
|
||||
SZIP_CONFIGURE_ON= --with-szlib=${LOCALBASE}
|
||||
SZIP_LIB_DEPENDS= libsz.so:science/szip
|
||||
SZIP_LIB_DEPENDS= libsz.so:science/libaec
|
||||
|
||||
post-patch:
|
||||
@${REINPLACE_CMD} -e 's|-O3||g' ${WRKSRC}/config/gnu-flags
|
||||
|
||||
@ -1,6 +1,6 @@
|
||||
PORTNAME= helfem
|
||||
DISTVERSION= g20210912
|
||||
PORTREVISION= 2
|
||||
PORTREVISION= 3
|
||||
CATEGORIES= science # chemistry
|
||||
|
||||
MAINTAINER= yuri@FreeBSD.org
|
||||
@ -12,7 +12,7 @@ LICENSE_FILE= ${WRKSRC}/COPYING
|
||||
LIB_DEPENDS= libarmadillo.so:math/armadillo \
|
||||
libgsl.so:math/gsl \
|
||||
libhdf5_cpp.so:science/hdf5 \
|
||||
libsz.so:science/szip \
|
||||
libsz.so:science/libaec \
|
||||
libxc.so:science/libxc
|
||||
|
||||
USES= cmake fortran
|
||||
|
||||
@ -1,5 +1,6 @@
|
||||
PORTNAME= lammps
|
||||
PORTVERSION= ${GH_TAGNAME:C/(stable|patch)_([0-9]{1,2})([A-Z][a-z][a-z])([0-9]{4})/\4.\3.\2/S/Jan/01/S/Feb/02/S/Mar/03/S/Apr/04/S/May/05/S/Jun/06/S/Jul/07/S/Aug/08/S/Sep/09/S/Oct/10/S/Nov/11/S/Dec/12/}
|
||||
PORTREVISION= 1
|
||||
CATEGORIES= science
|
||||
|
||||
MAINTAINER= yuri@FreeBSD.org
|
||||
@ -81,7 +82,7 @@ GZIP_CMAKE_BOOL= WITH_GZIP
|
||||
H5MD_DESC= USER-H5MD package based on libhdf5
|
||||
H5MD_CMAKE_BOOL= PKG_USER-H5MD
|
||||
H5MD_LIB_DEPENDS= libhdf5.so:science/hdf5 \
|
||||
libsz.so:science/szip
|
||||
libsz.so:science/libaec
|
||||
|
||||
KIM_DESC= KIM package based on the OpenKim library/repository
|
||||
KIM_USES= pkgconfig
|
||||
|
||||
@ -2,6 +2,7 @@
|
||||
|
||||
PORTNAME= netcdf
|
||||
PORTVERSION= 4.8.1
|
||||
PORTREVISION= 1
|
||||
DISTVERSIONPREFIX= c-
|
||||
CATEGORIES= science
|
||||
MASTER_SITES= https://downloads.unidata.ucar.edu/netcdf-c/${PORTVERSION}/ \
|
||||
@ -37,7 +38,7 @@ SZIP_DESC= SZIP support (required if HDF5 was built with SZIP)
|
||||
|
||||
DOXYGEN_BUILD_DEPENDS= doxygen:devel/doxygen
|
||||
DOXYGEN_CONFIGURE_ENABLE= doxygen
|
||||
SZIP_LIB_DEPENDS= libsz.so:science/szip
|
||||
SZIP_LIB_DEPENDS= libsz.so:science/libaec
|
||||
SZIP_LIBS= -lsz
|
||||
|
||||
post-patch:
|
||||
|
||||
@ -2,7 +2,7 @@ PORTNAME= openems
|
||||
DISTVERSIONPREFIX= v
|
||||
DISTVERSION= 0.0.35-71
|
||||
DISTVERSIONSUFFIX= -g4c24b6e
|
||||
PORTREVISION= 2
|
||||
PORTREVISION= 3
|
||||
CATEGORIES= science
|
||||
|
||||
MAINTAINER= yuri@FreeBSD.org
|
||||
@ -21,7 +21,7 @@ LIB_DEPENDS= libboost_system.so:devel/boost-libs \
|
||||
libfparser-4.5.so:math/fparser \
|
||||
libhdf5.so:science/hdf5 \
|
||||
libpng16.so:graphics/png \
|
||||
libsz.so:science/szip \
|
||||
libsz.so:science/libaec \
|
||||
libtiff.so:graphics/tiff \
|
||||
libtinyxml.so:textproc/tinyxml \
|
||||
libvtkCommonCore-8.2.so:math/vtk8 # some related packages don't support vtk9 yet, see https://github.com/thliebig/QCSXCAD/issues/6#issuecomment-901633240
|
||||
|
||||
@ -1,6 +1,7 @@
|
||||
PORTNAME= openmc
|
||||
DISTVERSIONPREFIX= v
|
||||
DISTVERSION= 0.13.0
|
||||
PORTREVISION= 1
|
||||
CATEGORIES= science
|
||||
|
||||
MAINTAINER= yuri@FreeBSD.org
|
||||
@ -14,7 +15,7 @@ LIB_DEPENDS= libfmt.so:devel/libfmt \
|
||||
libhdf5.so:science/hdf5 \
|
||||
libpng16.so:graphics/png \
|
||||
libpugixml.so:textproc/pugixml \
|
||||
libsz.so:science/szip
|
||||
libsz.so:science/libaec
|
||||
|
||||
USES= cmake:noninja eigen:3 pkgconfig
|
||||
|
||||
|
||||
@ -1,5 +1,6 @@
|
||||
PORTNAME= openmolcas
|
||||
DISTVERSION= 22.02
|
||||
PORTREVISION= 1
|
||||
CATEGORIES= science # chemistry
|
||||
|
||||
MAINTAINER= yuri@FreeBSD.org
|
||||
@ -12,7 +13,7 @@ BROKEN_i386= build breaks: Symbol 'maxfilesize' at (1) has no IMPLICIT type; did
|
||||
|
||||
BUILD_DEPENDS= ${PYTHON_PKGNAMEPREFIX}pyparsing>0:devel/py-pyparsing@${PY_FLAVOR}
|
||||
LIB_DEPENDS= libhdf5.so:science/hdf5 \
|
||||
libsz.so:science/szip \
|
||||
libsz.so:science/libaec \
|
||||
libxc.so:science/libxc
|
||||
|
||||
USES= cmake fortran python shebangfix
|
||||
|
||||
@ -1,6 +1,6 @@
|
||||
PORTNAME= PyNE
|
||||
DISTVERSION= 0.7.7
|
||||
PORTREVISION= 1
|
||||
PORTREVISION= 2
|
||||
CATEGORIES= science
|
||||
MASTER_SITES= http://raw.githubusercontent.com/pyne/data/master/:decay \
|
||||
http://raw.githubusercontent.com/pyne/data/master/:cram \
|
||||
@ -30,7 +30,7 @@ BUILD_DEPENDS= cmake:devel/cmake \
|
||||
${PY_DEPENDS}
|
||||
LIB_DEPENDS= libhdf5.so:science/hdf5 \
|
||||
libMOAB.so:math/moab \
|
||||
libsz.so:science/szip
|
||||
libsz.so:science/libaec
|
||||
RUN_DEPENDS= ${PY_DEPENDS}
|
||||
|
||||
USES= compiler:c++17-lang fortran python:3.7+
|
||||
|
||||
@ -1,7 +1,7 @@
|
||||
PORTNAME= qmcpack
|
||||
DISTVERSIONPREFIX= v
|
||||
DISTVERSION= 3.14.0
|
||||
PORTREVISION= 2
|
||||
PORTREVISION= 3
|
||||
CATEGORIES= science
|
||||
|
||||
MAINTAINER= yuri@FreeBSD.org
|
||||
@ -17,7 +17,7 @@ LIB_DEPENDS= libboost_system.so:devel/boost-libs \
|
||||
libhdf5.so:science/hdf5 \
|
||||
libmpich.so:net/mpich \
|
||||
libopenblas.so:math/openblas \
|
||||
libsz.so:science/szip
|
||||
libsz.so:science/libaec
|
||||
TEST_DEPENDS= bash:shells/bash
|
||||
|
||||
USES= cmake:testing compiler:c++17-lang fortran gnome localbase:ldflags pkgconfig python shebangfix
|
||||
|
||||
@ -1,6 +1,6 @@
|
||||
PORTNAME= rmf
|
||||
DISTVERSION= 1.4
|
||||
PORTREVISION= 1
|
||||
PORTREVISION= 2
|
||||
CATEGORIES= science graphics
|
||||
|
||||
MAINTAINER= yuri@FreeBSD.org
|
||||
@ -11,7 +11,7 @@ LICENSE_FILE= ${WRKSRC}/COPYING
|
||||
|
||||
LIB_DEPENDS= libboost_system.so:devel/boost-libs \
|
||||
libhdf5.so:science/hdf5 \
|
||||
libsz.so:science/szip
|
||||
libsz.so:science/libaec
|
||||
|
||||
USES= compiler:c++17-lang cmake python:build shebangfix
|
||||
USE_LDCONFIG= yes
|
||||
|
||||
@ -1,7 +1,7 @@
|
||||
PORTNAME= votca
|
||||
DISTVERSIONPREFIX= v
|
||||
DISTVERSION= 2022
|
||||
PORTREVISION= 1
|
||||
PORTREVISION= 2
|
||||
CATEGORIES= science
|
||||
|
||||
PATCH_SITES= https://github.com/${GH_ACCOUNT}/${PORTNAME}/commit/
|
||||
@ -27,7 +27,7 @@ LIB_DEPENDS= libboost_program_options.so:devel/boost-libs \
|
||||
libgromacs_d.so:science/gromacs \
|
||||
libhdf5.so:science/hdf5 \
|
||||
libint2.so:science/libint2 \
|
||||
libsz.so:science/szip \
|
||||
libsz.so:science/libaec \
|
||||
libxc.so:science/libxc
|
||||
RUN_DEPENDS= bash:shells/bash \
|
||||
${PYNUMPY} \
|
||||
|
||||
@ -1,5 +1,6 @@
|
||||
PORTNAME= slurm
|
||||
DISTVERSION= 20.02.7
|
||||
PORTREVISION= 1
|
||||
CATEGORIES= sysutils python
|
||||
MASTER_SITES= https://download.schedmd.com/slurm/
|
||||
PKGNAMESUFFIX= -wlm
|
||||
@ -58,7 +59,7 @@ GUI_CONFIGURE_ENABLE= glibtest gtktest x11
|
||||
#GTK2_CONFIGURE_OFF= --disable-gtktest
|
||||
|
||||
HDF5_LIB_DEPENDS= libhdf5_cpp.so:science/hdf5 \
|
||||
libsz.so:science/szip
|
||||
libsz.so:science/libaec
|
||||
HDF5_CONFIGURE_WITH= hdf5
|
||||
HDF5_CONFIGURE_ENV= H5CC=${LOCALBASE}/bin/h5cc
|
||||
|
||||
|
||||
Loading…
Reference in New Issue
Block a user