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84664 Commits

Author SHA1 Message Date
Ludovic Courtès
cff9fee82a
linux-container: Add #:guest-uid and #:guest-gid to 'eval/container'. 
* gnu/system/linux-container.scm (eval/container): Add #:guest-uid
and #:guest-gid and honor them.
 2022-03-19 18:26:00 +01:00
Ludovic Courtès
c77544b387
linux-container: 'eval/container' honors #:namespaces. 
* gnu/system/linux-container.scm (eval/container): Pass #:namespaces to
'call-with-container'.
 2022-03-19 18:26:00 +01:00
Maxim Cournoyer
b45a301618
tests: install: Add two new Btrfs RAID10 install test. 
* gnu/tests/install.scm (%btrfs-raid10-root-os)
(%btrfs-raid10-root-os): New variables.
(%btrfs-raid10-root-installation-script): Likewise.
(%test-btrfs-raid10-root-images): Likewise.
(%test-btrfs-raid10-root-os, %test-btrfs-raid10-root-os-degraded): New tests.
 2022-03-19 11:08:30 -04:00
Maxim Cournoyer
252330edd4
tests: install: Enable the use of multiple disk devices for tests. 
* gnu/tests/install.scm (run-install)[packages]: Unconditionally add to OS.
[NUMBER-OF-DISKS]: Add argument, update doc and adjust.  The returned gexp
output is now a list of images rather than the image itself.
* gnu/tests/install.scm (qemu-command*): Rename IMAGE argument to IMAGES, to
account for the above change.  Adjust doc.  Generate a QEMU '-drive' argument
for each disk image.
(%test-installed-os): Rename the IMAGE variable to IMAGES.
(%test-installed-extlinux-os): Likewise.
(%test-iso-image-installer): Likewise.
(%test-separate-home-os): Likewise.
(%test-separate-store-os): Likewise.
(%test-raid-root-os): Likewise.
(%test-encrypted-root-os): Likewise.
(%test-lvm-separate-home-os): Likewise.
(%test-encrypted-root-not-boot-os): Likewise.
(%test-btrfs-root-os): Likewise.
(%test-btrfs-raid-root-os): Likewise.
(%test-btrfs-root-on-subvolume-os): Likewise.
(%test-jfs-root-os): Likewise.
(%test-f2fs-root-os): Likewise.
(%test-xfs-root-os): Likewise.
(guided-installation-test): Likewise.
 2022-03-19 11:08:30 -04:00
Maxim Cournoyer
52d710b917
tests: install: Streamline 'qemu-command/writable-image'. 
* gnu/tests/install.scm (qemu-command/writable-image): Replace the use of a
writable backing file by the use of the '-snapshot' option, and rename to...
(qemu-command*): ... this, adjusting all calls.
 2022-03-19 11:08:30 -04:00
Maxim Cournoyer
947b8f99d4
tests: install: Adjust the timeouts on two failing tests. 
The 'login on tty1' and 'getlogin on tty1' tests were failing on a machine
equipped with slower hard drives.

* gnu/tests/base.scm (run-basic-test)
["login on tty1", "getlogin on tty1"]: Bump timeout from 10 to 30 s.
 2022-03-19 11:08:30 -04:00
Nicolas Goaziou
55a680a646
gnu: Add wego. 
* gnu/packages/weather.scm: New file.
* gnu/local.mk: Register new file.
 2022-03-19 00:56:29 +01:00
Nicolas Goaziou
3a68cf2b96
gnu: Add go-github-com-schachmat-ingo. 
* gnu/packages/golang.scm (go-github-com-schachmat-ingo): New variable.
 2022-03-19 00:56:23 +01:00
Ludovic Courtès
de3cd060cc
gnu: guix: Update to 2fb4304. 
* gnu/packages/package-management.scm (guix): Update to 2fb4304.
 2022-03-18 23:51:18 +01:00
Leo Famulari
386adb6df0
gnu: b2sum: Produce generic binaries and enable tuning. 
* gnu/packages/crypto.scm (b2sum)[arguments]: Add 'de-tune' phase.
[properties]: Mark the package as tunable.
 2022-03-18 12:58:05 -04:00
Ludovic Courtès
2fb4304ee7
gnu: bitlbee-purple: Use 'modify-inputs'. 
* gnu/packages/messaging.scm (bitlbee-purple)[inputs]: Use 'modify-inputs'.
 2022-03-18 16:03:35 +01:00
Ludovic Courtès
cd6d3a8771
gnu: bitlbee-purple: Add search path for "PURPLE_PLUGIN_PATH". 
Suggested by Maxime Devos.

* gnu/packages/messaging.scm (bitlbee-purple)[native-search-paths]: New field.
 2022-03-18 16:03:34 +01:00
Formbi
bc6490a85f
gnu: Add ckb-next. 
* gnu/packages/hardware.scm (ckb-next): add ckb-next

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2022-03-18 16:03:34 +01:00
Ludovic Courtès
a6de0c4c9c
gnu: feh, newsboat: Inline top-level reference to 'curl'. 
These references introduced top-level circular dependencies.
Furthermore, they were inaccurate since only CURL_CA_BUNDLE is honored.

* gnu/packages/image-viewers.scm (feh)[native-search-paths]: Remove
top-level reference to 'curl'; inline "CURL_CA_BUNDLE" spec.
* gnu/packages/syndication.scm (newsboat)[native-search-paths]:
Likewise.
 2022-03-18 16:03:34 +01:00
Ludovic Courtès
7f9616717f
gnu: ghc-optparse-applicative@0.15.1.0: Avoid circular top-level references. 
* gnu/packages/purescript.scm (ghc-optparse-applicative-0.15.1.0): Move
to...
* gnu/packages/haskell-xyz.scm (ghc-optparse-applicative-0.15.1.0): ... here.
 2022-03-18 16:03:34 +01:00
angryrectangle
3a91c92547
home: services: Fix bash aliases without guix-defaults. 
* gnu/home/services/shells.scm: Fix bash aliases not being added if
  guix-defaults? was #f. Also fix inaccuracy in documentation about placement
  of defaults.
* doc/guix.texi (Shells Home Services): Adjust accordingly.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-03-18 16:03:34 +01:00
Ludovic Courtès
09c7eeb659
gnu: emacs-osm: Record the absolute file name of 'curl'. 
* gnu/packages/emacs-xyz.scm (emacs-osm)[arguments, inputs]: New fields.
 2022-03-18 16:03:34 +01:00
Ludovic Courtès
0011dd0a01
gnu: emacs-osm: Fetch source over Git. 
* gnu/packages/emacs-xyz.scm (emacs-osm)[source]: Switch to 'git-fetch'.
 2022-03-18 16:03:33 +01:00
Allan Adair
64677f40e0
gnu: Add emacs-osm. 
* gnu/packages/emacs-xyz.scm (emacs-osm): New variable.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2022-03-18 16:03:33 +01:00
Ludovic Courtès
e607c377bb
home: services: Export record type accessors. 
* gnu/home/services/shepherd.scm: Export <home-shepherd-configuration>
accessors.  Re-export <shepherd-service> accessors.
 2022-03-18 16:03:33 +01:00
Ludovic Courtès
2da0f2828b
gnu: petsc-openmpi: Remove input labels. 
* gnu/packages/maths.scm (petsc-openmpi)[inputs]: Use 'modify-inputs'.
[arguments]: Adjust label name for hdf5.
 2022-03-18 16:03:32 +01:00
Ludovic Courtès
5f83f95210
gnu: petsc-openmpi: Fix compilation with Scotch 7.0. 
* gnu/packages/maths.scm (petsc-openmpi)[inputs]: Add SCOTCH:METIS.
[arguments]: Add 'adjust-pt-scotch-library-names' phase.
 2022-03-18 16:03:32 +01:00
Efraim Flashner
3e34b01b70
gnu: Add python-scikit-allel. 
* gnu/packages/python-science.scm (python-scikit-allel): New variable.
 2022-03-18 15:58:23 +02:00
cage
cab5f92836
gnu: Add cl-purgatory. 
* gnu/packages/lisp-xyz.scm (cl-purgatory, ecl-purgatory, sbcl-purgatory): New
  variables.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2022-03-18 14:19:46 +01:00
Efraim Flashner
8075fb64a9
gnu: vim: Update to 8.2.4564. 
* gnu/packages/vim.scm (vim): Update to 8.2.4564.
[arguments]: Adjust custom 'patch-absolute-paths phase to upstream
changes.
 2022-03-18 14:09:07 +02:00
Mathieu Othacehe
a03936a223
gnu: gnome-shell-extension-customize-ibus: Update to 82. 
* gnu/packages/gnome-xyz.scm (gnome-shell-extension-customize-ibus): Update to 82.
 2022-03-18 10:48:24 +01:00
Olivier Dion
ba15abc008
gnu: capstone: Update to 4.0.2. 
* gnu/packages/engineering.scm (capstone): Update to 4.0.2.
[source]: Fix indentation and git URL.
[phases]: Strip trailing #t.
[home]: Update URL.

Co-authored-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2022-03-18 01:44:32 -04:00
Maxim Cournoyer
c886968bb1
gnu: Add sysbench. 
* gnu/packages/benchmark.scm (sysbench): New variable.
 2022-03-18 01:32:23 -04:00
Maxim Cournoyer
7be44e8587
gnu: Add ck. 
* gnu/packages/c.scm (ck): New variable.
 2022-03-18 01:26:26 -04:00
Maxim Cournoyer
93e9712952
gnu: postgresql-14: Update to 14.2. 
* gnu/packages/databases.scm (postgresql-14): Update to 14.2.
 2022-03-18 00:49:40 -04:00
Brice Waegeneire
573a15474f
gnu: postgresql-11: Update to 11.15. 
* gnu/packages/databases.scm (postgresql-11): Update to 11.15.

Co-authored-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2022-03-18 00:49:40 -04:00
Brice Waegeneire
284c0dca4e
gnu: postgresql-10: Update to 10.20. 
* gnu/packages/databases.scm (postgresql-10): Update to 10.20.

Co-authored-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2022-03-18 00:49:40 -04:00
Maxim Cournoyer
a464cd556e
gnu: postgresql-9.6: Remove EOL package. 
* gnu/packages/databases.scm (postgresql-9.6): Delete variable.
 2022-03-18 00:49:39 -04:00
Leo Famulari
df2e19f376
gnu: MPD: Update to 0.23.6. 
* gnu/packages/mpd.scm (mpd): Update to 0.23.6.
 2022-03-18 00:18:12 -04:00
Tobias Geerinckx-Rice
f73af2f88e
gnu: linux-libre: Enable UTF-8 normalization and casefolding. 
Without this it is apparently impossible to mount file systems with the
feature, which apparently some distributions do by default now.

  podiki[m]> I have an sdcard that was formatted with ext4 casefold
             [by Arch Linux], cannot be mounted

* gnu/packages/aux-files/linux-libre/5.10-arm.conf,
gnu/packages/aux-files/linux-libre/5.10-arm64.conf,
gnu/packages/aux-files/linux-libre/5.10-i686.conf,
gnu/packages/aux-files/linux-libre/5.10-x86_64.conf,
gnu/packages/aux-files/linux-libre/5.15-arm.conf,
gnu/packages/aux-files/linux-libre/5.15-arm64.conf,
gnu/packages/aux-files/linux-libre/5.15-i686.conf,
gnu/packages/aux-files/linux-libre/5.15-x86_64.conf,
gnu/packages/aux-files/linux-libre/5.16-arm.conf,
gnu/packages/aux-files/linux-libre/5.16-arm64.conf,
gnu/packages/aux-files/linux-libre/5.16-i686.conf,
gnu/packages/aux-files/linux-libre/5.16-x86_64.conf,
gnu/packages/aux-files/linux-libre/5.4-arm.conf,
gnu/packages/aux-files/linux-libre/5.4-arm64.conf,
gnu/packages/aux-files/linux-libre/5.4-i686.conf,
gnu/packages/aux-files/linux-libre/5.4-x86_64.conf:
Set CONFIG_UNICODE=y.
 2022-03-13 01:00:00 +01:00
J. Sims via Guix-patches via
a28dd47192
gnu: rtl8812au-aircrack-ng-linux-module: Update to 5.6.4.2-7.37e27f9. 
This fixes issues with Linux 5.17 and adds optimizations for 5.15:

https://github.com/aircrack-ng/rtl8812au/pull/942
2f52f84096

* gnu/packages/linux.scm (rtl8812au-aircrack-ng-linux-module): Update to
5.6.4.2-7.37e27f9.
 2022-03-17 17:39:39 -04:00
Leo Famulari
0c0fdae4ab
gnu: linux-libre 4.9: Update to 4.9.307. 
* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.307.
(linux-libre-4.9-pristine-source): Update hash.
 2022-03-17 17:39:39 -04:00
Leo Famulari
a06b378896
gnu: linux-libre 4.14: Update to 4.14.272. 
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.272.
(linux-libre-4.14-pristine-source): Update hash.
 2022-03-17 17:39:39 -04:00
Leo Famulari
b498081dcc
gnu: linux-libre 4.19: Update to 4.19.235. 
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.235.
(linux-libre-4.19-pristine-source): Update hash.
 2022-03-17 17:39:39 -04:00
Leo Famulari
38e9afec0d
gnu: linux-libre 5.4: Update to 5.4.185. 
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.185.
(linux-libre-5.4-pristine-source): Update hash.
 2022-03-17 17:39:38 -04:00
Leo Famulari
4dbe57e29d
gnu: linux-libre 5.10: Update to 5.10.106. 
* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.106.
(linux-libre-5.10-pristine-source): Update hash.
 2022-03-17 17:39:38 -04:00
Leo Famulari
297e82fb84
gnu: linux-libre 5.15: Update to 5.15.29. 
* gnu/packages/linux.scm (linux-libre-5.15-version): Update to 5.15.29.
(linux-libre-5.15-pristine-source): Update hash.
 2022-03-17 17:39:38 -04:00
Leo Famulari
25f4d66705
gnu: linux-libre: Update to 5.16.15. 
* gnu/packages/linux.scm (linux-libre-5.16-version): Update to 5.16.15.
(linux-libre-5.16-pristine-source): Update hash.
 2022-03-17 17:39:35 -04:00
Maxim Cournoyer
2c4284d952
Revert "services: nfs: Define rpcbind-shepherd-service at the top level." 
This reverts commit 0a9e82b430, which didn't end
up fixing anything.  The problem was elsewhere; namely, using
'operating-system-services' instead of 'operating-system-user-services'.
 2022-03-17 16:48:21 -04:00
Maxim Cournoyer
0a9e82b430
services: nfs: Define rpcbind-shepherd-service at the top level. 
Attempting to use the 'nfs-service-type' as part of a computed
operating-system definition, the following exception would be thrown:

  ice-9/boot-9.scm:1685:16: In procedure raise-exception:
  ERROR:
    1. &ambiguous-target-service-error:
        service: #<<service> type: #<service-type rpcbind 7f7529853780> value: #<<rpcbind-configuration> rpcbind: #<package rpcbind@1.2.6 gnu/packages/onc-rpc.scm:87 7f75389e78f0> warm-start?: #t>>
        target-type: #<service-type shepherd-root 7f7529396080>
    2. &message: "more than one target service of type 'shepherd-root'"

The problem was that the rpcbind shepherd-service object was dynamically
instantiated every time the rpcbind-service-type would be called, causing
multiple objects in some situations, resulting in the above condition.

* gnu/services/nfs.scm (rpcbind-service-type): Refactor and adjust in a way to
extract...
(rpcbind-shepherd-service): ... this new procedure.
 2022-03-17 16:10:41 -04:00
Efraim Flashner
276a767e2c
gnu: guile-git: Skip test on powerpc-linux. 
* gnu/packages/guile.scm (guile-git)[arguments]: When building on
powerpc-linux add a phase to skip one test.
 2022-03-17 20:01:04 +02:00
Ricardo Wurmus
bbe42bb392
gnu: Add r-mbess. 
* gnu/packages/cran.scm (r-mbess): New variable.
 2022-03-17 15:30:21 +01:00
Efraim Flashner
1c85338cdd
gnu: python-jupyter-sphinx: Run tests. 
* gnu/packages/sphinx.scm (python-jupyter-sphinx)[source]: Download
using git-fetch.
[arguments]: Use custom 'check phase.
[native-inputs]: Add python-pytest.
 2022-03-17 14:52:44 +02:00
Efraim Flashner
e4b91f10c8
gnu: python-scipy: Adjust phases. 
* gnu/packages/python-science.scm (python-scipy)[arguments]: Replace
'check with custom 'check phase.
 2022-03-17 14:51:38 +02:00
jgart
bae2201a8d
gnu: sicp: Update to 20180718-2.bda03f7. 
* gnu/packages/scheme.scm (sicp): Update to 20180718-2.bda03f7.
  [version]: Use git-version function.
  [source]: Use git-file-name function.
  [arguments]: Remove trailing `#t`.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2022-03-17 10:02:23 +01:00
jgart
a7b40dff2f
gnu: cl-3bmd: Update to 0.0.0-3.4e08d82. 
* gnu/packages/lisp-xyz.scm (sbcl-3bmd): Update to 0.0.0-3.4e08d82.
  [native-inputs]: Add sbcl-fiasco.
  [inputs]: Add python, python-pygments, and use newer inputs guix style.
  [arguments]: Add 'fix-python3-path' phase.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2022-03-17 10:01:59 +01:00
jgart
b999ce74ba
gnu: cl-envy: Update to 26a7faa. 
* gnu/packages/lisp-xyz.scm (sbcl-envy): Update to 26a7faa.
  [native-inputs]: Uncomment test inputs and use new style.
  [arguments]: Add 'asd-systems' parameter, Remove 'fix-tests' phase.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2022-03-17 09:32:39 +01:00
Ricardo Wurmus
24f7c64bb2
gnu: Add r-ggtern. 
* gnu/packages/cran.scm (r-ggtern): New variable.
 2022-03-17 07:46:19 +01:00
Carl Dong
34e9eae68c
gnu: cross-base: Don't specify mingw --with-newlib 
Previous to this commit, we added a --with-newlib configure flag to
cross-gcc when cross-newlib?, but cross-newlib? is true only when
target-mingw?.

It turns out that specifying --with-newlib disables the
GLIBCXX_CROSSCONFIG check, which is used to detect
_GLIBCXX_HAVE__WFOPEN, which is required in C++17 std::filesystem for
mingw-w64 systems.

Additional context: In gnu/packages/embedded.scm, --with-newlib is
specified explicitly when we're actually using newlib, which seems like
the correct way of handling it.

Situation in other distros:
- Debian's gcc-mingw-w64 doesn't specify --with-newlib
- Fedora's mingw64-gcc-c++ explicitly specifies --without-newlib

Chesterton's fence: Chatting with janneke, who originally added this
mechanism, reveals that this flag is not only no longer required, but
also that removing it doesn't break his guile-mingw builds. See IRC logs
of #guix for 2022-02-15.

* gnu/packages/cross-base.scm (cross-gcc-arguments): Don't check for and
specify --with-newlib.
(cross-libc): Check for mingw and use mingw-w64 directly.
(cross-newlib?): Remove, unexport.
(native-libc): Remove.
 2022-03-16 22:13:48 -04:00
Tobias Geerinckx-Rice
0c6c957a01
gnu: knot: Update to 3.1.6. 
* gnu/packages/dns.scm (knot): Update to 3.1.6.
 2022-03-13 01:00:00 +01:00
Leo Famulari
69d3896c0f
gnu: expat: Update to 2.4.7. 
This fixes some regressions in 2.4.5 and 2.4.6:

https://www.xml.com/news/2022-02-expat-246/
https://www.xml.com/news/2022-03-expat-247/

* gnu/packages/xml.scm (expat/fixed): Update to 2.4.7.
 2022-03-16 17:14:19 -04:00
Leo Famulari
62ea3d510f
gnu: OpenSSL 3: Update to 3.0.2 [fixes CVE-2022-0778]. 
For more information about this vulnerability:

https://www.openssl.org/news/secadv/20220315.txt

* gnu/packages/tls.scm (openssl-3.0): Update to 3.0.2.
 2022-03-16 17:14:19 -04:00
Leo Famulari
139a5cab04
gnu: OpenSSL: Update to 1.1.1n [fixes CVE-2022-0778]. 
For more information about this vulnerability:

https://www.openssl.org/news/secadv/20220315.txt

* gnu/packages/tls.scm (openssl/fixed): Update to 1.1.1n.
 2022-03-16 17:14:08 -04:00
Tobias Geerinckx-Rice
3076e69577
gnu: isc-dhcp: Update bundled BIND to 9.11.37. 
* gnu/packages/admin.scm (isc-dhcp)[inputs]:
Update bind-source-tarball to 9.11.37.
 2022-03-13 01:00:37 +01:00
Tobias Geerinckx-Rice
880e70e8b6
gnu: bind: Update to 9.16.27 [fixes CVE-2022-0396]. 
* gnu/packages/dns.scm (isc-bind): Update to 9.16.27.
 2022-03-13 01:00:00 +01:00
Tobias Geerinckx-Rice
1ef6203630
gnu: cdrtools: Don't return #t from snippet. 
* gnu/packages/cdrom.scm (cdrtools)[source]: Don't return #t from snippet.
 2022-03-13 01:00:01 +01:00
Tobias Geerinckx-Rice
0ac0f43a90
gnu: cdrtools: Use G-expressions. 
* gnu/packages/cdrom.scm (cdrtools)[arguments]:
Rewrite as G-expressions.  Don't return #t from phases.
 2022-03-13 01:00:00 +01:00
Tobias Geerinckx-Rice
b97a8b8941
gnu: cdrtools: Link dynamically. 
* gnu/packages/cdrom.scm (cdrtools)[arguments]: Add "LINKMODE=dynamic" to
the #:configure-flags.
 2022-03-13 01:00:00 +01:00
Tobias Geerinckx-Rice
53ac77389c
gnu: cdrtools: Prepare for cross-compilation. 
* gnu/packages/cdrom.scm (cdrtools)[arguments]: Use CC-FOR-TARGET.
 2022-03-13 01:00:00 +01:00
Efraim Flashner
21457fb31e
gnu: ruby-stackprof: Adjust skipped test on powerpc-linux. 
* gnu/packages/ruby.scm (ruby-stackprof)[arguments]: On powerpc-linux
adjust the 'skip-dubious-test phase.
 2022-03-16 20:24:52 +02:00
Andrew Tropin
d74d18437e
gnu: i2pd: Update to 2.41.0. 
* gnu/packages/i2p.scm (i2pd): Update to 2.41.0.
  [arguments]: Remove trailing slash to match all libi2pd entries.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2022-03-16 16:48:11 +01:00
jgart
4637b6952c
gnu: cl-mito: Update to 47ba486. 
* gnu/packages/lisp-xyz.scm (sbcl-mito): Update to 47ba486.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2022-03-16 16:48:11 +01:00
Guillaume Le Vaillant
2da3c84ab7
gnu: opencpn: Update to 5.6.0. 
* gnu/packages/geo.scm (opencpn): Update to 5.6.0.
  [inputs]: Add alsa-utils, eudev, jasper, libjpeg-turbo and libusb.
 2022-03-16 16:48:11 +01:00
Tanguy Le Carrour
797e308047
gnu: Add tessen. 
* gnu/packages/password-utils.scm (tessen): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-03-16 15:48:53 +01:00
Denis 'GNUtoo' Carikli
d7a30c6e1d
gnu: matterbridge: update to 1.24.0 
* gnu/packages/messaging.scm (matterbridge): Update to 1.24.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-03-16 15:48:52 +01:00
Pradana AUMARS
fee68a93d8
gnu: Add python-mathlibtools. 
* gnu/packages/lean.scm (python-mathlibtools): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-03-16 15:48:52 +01:00
Jai Vetrivelan
f1aa1f3412
gnu: dunst: Update to 1.8.1. 
* gnu/packages/dunst.scm (dunst): Update to 1.8.1.
* gnu/packages/patches/dunst-1.7.3-fix-crash.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-03-16 15:48:52 +01:00
Denis 'GNUtoo' Carikli
4ba792fa15
gnu: python-gitlab: update to 3.2.0 
* gnu/packages/python-web.scm (python-gitlab): Update to 3.2.0

Signed-off-by: Denis 'GNUtoo' Carikli <GNUtoo@cyberdimension.org>
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-03-16 15:48:52 +01:00
Ludovic Courtès
47960b5526
system: Improve 'read-boot-parameters' incompatibility diagnostic. 
Previously, when reading an incompatible "parameters" file, 'guix
system' would print a warning and then crash with a wrong-type-arg
backtrace because code expects 'read-boot-parameters' to always return a
<boot-parameters> record.

* gnu/system.scm (read-boot-parameters): Upon incompatibility, raise an
error instead of returning #f.  Also raise a '&fix-hint' condition.
* tests/boot-parameters.scm ("read, construction, mandatory fields"):
Define 'test-read-boot-parameters' as a macro; expect
'formatted-message?' exceptions rather than #f returns.
 2022-03-16 15:48:52 +01:00
Brendan Tildesley
5d4af22ef2
gnu: cryfs: Update to 0.11.2. 
* gnu/packages/crypto.scm (cryfs): Update to 0.11.2.
[arguments]: Fix build with boost 1.77

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-03-16 15:48:52 +01:00
Fatima Toothpaste
66a4a5ecb2
gnu : nicotine+: Update to 3.2.1. 
* gnu/packages/nicotine.scm (nicotine+): Update to 3.2.1.
  [source]: Delete network requried tests in snippet.
  [arguments]: Remove trailing #t.
  Replae 'check phase to run proper test.
  [inputs]: Add bash-minimal, gspell, libappindicator.
  [native-inputs]: Remove python-pytest. Add xvfb-run.
  [home-page]: Update URL.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-03-16 15:48:51 +01:00
Efraim Flashner
53d986215f
Revert "gnu: %boot3-inputs: Add missing input." 
This reverts commit ed2ca2dcb5.

This is no longer needed after the gcc STARTFILE_PREFIX_SPEC commit.
 2022-03-16 12:17:09 +02:00
Efraim Flashner
030900747b
Revert "gnu: Add %final-inputs-riscv64." 
This reverts commit 0444be8689.

This is no longer necessary after the gcc STARTFILE_PREFIX_SPEC commit.
 2022-03-16 12:16:15 +02:00
Efraim Flashner
32f52f82b3
gnu: gcc: For riscv64-linux remove STARTFILE_PREFIX_SPEC. 
* gnu/packages/gcc.scm (gcc-4.7)[arguments]: When building for
riscv64-linux and the 'gcc/configure/riscv' directory exists adjust the
STARTFILE_PREFIX_SPEC so it doesn't do anything.
 2022-03-16 12:09:42 +02:00
kiasoc5
53370c7b03
gnu: httpie: Update to 3.1.0 [security fixes]. 
Fixes CVE-2022-24737 and CVE-2022-0430.

* gnu/packages/python-web.scm (httpie): Update to 3.1.0.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2022-03-15 20:01:33 -04:00
zimoun
8a0713aef2
gnu: Add r-diffcyt. 
* gnu/packages/bioconductor.scm (r-diffcyt): New variable.
 2022-03-15 22:55:37 +01:00
zimoun
69af58e9a1
gnu: Add r-ga. 
* gnu/packages/cran.scm (r-ga): New variable.
 2022-03-15 22:55:01 +01:00
zimoun
76f96c891c
gnu: Add r-carrier. 
* gnu/packages/cran.scm (r-carrier): New variable.
 2022-03-15 22:54:14 +01:00
zimoun
71ec67ef3f
gnu: Add r-babelwhale. 
* gnu/packages/cran.scm (r-babelwhale): New variable.
 2022-03-15 22:53:09 +01:00
zimoun
59978546fe
gnu: Add r-polychrome. 
* gnu/packages/cran.scm (r-polychrome): New variable.
 2022-03-15 22:52:37 +01:00
zimoun
fdbc472bd1
gnu: Add r-scannotatr. 
* gnu/packages/bioconductor.scm (r-scannotatr): New variable.
 2022-03-15 22:50:42 +01:00
Ricardo Wurmus
bec806e2fc
gnu: r-sn: Update to 2.0.2. 
* gnu/packages/statistics.scm (r-sn): Update to 2.0.2.
 2022-03-15 22:14:47 +01:00
Ricardo Wurmus
b3dbb32bb3
gnu: r-dt: Update to 0.21. 
* gnu/packages/statistics.scm (r-dt): Update to 0.21.
 2022-03-15 22:14:47 +01:00
Ricardo Wurmus
b6a1cc89d4
gnu: r-simr: Update to 1.0.6. 
* gnu/packages/statistics.scm (r-simr): Update to 1.0.6.
[propagated-inputs]: Add r-lmertest.
[synopsis]: Change case and spelling.
[description]: Use complete sentences.
 2022-03-15 22:14:47 +01:00
Ricardo Wurmus
6c30609f23
gnu: r-rmarkdown: Update to 2.13. 
* gnu/packages/statistics.scm (r-rmarkdown): Update to 2.13.
[propagated-inputs]: Add r-bslib.
 2022-03-15 22:14:46 +01:00
Ricardo Wurmus
be72c056f6
gnu: r-withr: Update to 2.5.0. 
* gnu/packages/statistics.scm (r-withr): Update to 2.5.0.
 2022-03-15 22:14:46 +01:00
Ricardo Wurmus
f077fa0fd0
gnu: r-openssl: Update to 2.0.0. 
* gnu/packages/statistics.scm (r-openssl): Update to 2.0.0.
 2022-03-15 22:14:46 +01:00
Ricardo Wurmus
2af90fa53e
gnu: r-commonmark: Update to 1.8.0. 
* gnu/packages/statistics.scm (r-commonmark): Update to 1.8.0.
 2022-03-15 22:14:46 +01:00
Ricardo Wurmus
46a1b44782
gnu: r-desc: Update to 1.4.1. 
* gnu/packages/statistics.scm (r-desc): Update to 1.4.1.
[propagated-inputs]: Remove r-crayon; add r-cli.
 2022-03-15 22:14:46 +01:00
Ricardo Wurmus
f2386cafcf
gnu: r-bbmisc: Update to 1.12. 
* gnu/packages/statistics.scm (r-bbmisc): Update to 1.12.
[propagated-inputs]: Add r-data-table.
 2022-03-15 22:14:46 +01:00
Ricardo Wurmus
4bc8d24e16
gnu: r-locfit: Update to 1.5-9.5. 
* gnu/packages/statistics.scm (r-locfit): Update to 1.5-9.5.
 2022-03-15 22:14:46 +01:00
Ricardo Wurmus
b0e3061665
gnu: r-rlang: Update to 1.0.2. 
* gnu/packages/statistics.scm (r-rlang): Update to 1.0.2.
 2022-03-15 22:14:46 +01:00
Ricardo Wurmus
4f9f37cfa9
gnu: r-survival: Update to 3.3-1. 
* gnu/packages/statistics.scm (r-survival): Update to 3.3-1.
 2022-03-15 22:14:46 +01:00
Ricardo Wurmus
7751e96df2
gnu: r-bien: Update to 1.2.5. 
* gnu/packages/cran.scm (r-bien): Update to 1.2.5.
[native-inputs]: Remove r-testthat.
 2022-03-15 22:14:46 +01:00
Ricardo Wurmus
d66b958b6d
gnu: r-filehash: Update to 2.4-3. 
* gnu/packages/cran.scm (r-filehash): Update to 2.4-3.
 2022-03-15 22:14:45 +01:00
Ricardo Wurmus
88716a4694
gnu: r-pdftools: Update to 3.1.1. 
* gnu/packages/cran.scm (r-pdftools): Update to 3.1.1.
 2022-03-15 22:14:45 +01:00
Ricardo Wurmus
aaec4f36a8
gnu: r-mlr3tuning: Update to 0.12.1. 
* gnu/packages/cran.scm (r-mlr3tuning): Update to 0.12.1.
 2022-03-15 22:14:45 +01:00
Ricardo Wurmus
4ad704ee05
gnu: r-bbotk: Update to 0.5.1. 
* gnu/packages/cran.scm (r-bbotk): Update to 0.5.1.
 2022-03-15 22:14:45 +01:00
Ricardo Wurmus
c01ae306ad
gnu: r-mlr3: Update to 0.13.3. 
* gnu/packages/cran.scm (r-mlr3): Update to 0.13.3.
 2022-03-15 22:14:45 +01:00
Ricardo Wurmus
e14b368dfe
gnu: r-parsnip: Update to 0.2.0. 
* gnu/packages/cran.scm (r-parsnip): Update to 0.2.0.
[propagated-inputs]: Add r-cli, r-ggplot2, and r-withr.
 2022-03-15 22:14:45 +01:00
Ricardo Wurmus
f4e5ed1120
gnu: r-posterior: Update to 1.2.1. 
* gnu/packages/cran.scm (r-posterior): Update to 1.2.1.
 2022-03-15 22:14:45 +01:00
Ricardo Wurmus
bb98e8bbf6
gnu: r-latex2exp: Update to 0.9.4. 
* gnu/packages/cran.scm (r-latex2exp): Update to 0.9.4.
 2022-03-15 22:14:45 +01:00
Ricardo Wurmus
5fc38f7ab6
gnu: r-shinystan: Update to 2.6.0. 
* gnu/packages/cran.scm (r-shinystan): Update to 2.6.0.
[propagated-inputs]: Remove r-rsconnect.
 2022-03-15 22:14:45 +01:00
Ricardo Wurmus
682d4a4b64
gnu: r-semplot: Update to 1.1.5. 
* gnu/packages/cran.scm (r-semplot): Update to 1.1.5.
 2022-03-15 22:14:44 +01:00
Ricardo Wurmus
3a7e5bb521
gnu: r-qgraph: Update to 1.9.2. 
* gnu/packages/cran.scm (r-qgraph): Update to 1.9.2.
 2022-03-15 22:14:44 +01:00
Ricardo Wurmus
5b992f4b42
gnu: r-openmx: Update to 2.20.6. 
* gnu/packages/cran.scm (r-openmx): Update to 2.20.6.
 2022-03-15 22:14:44 +01:00
Ricardo Wurmus
1e2b297a56
gnu: r-sem: Update to 3.1-14. 
* gnu/packages/cran.scm (r-sem): Update to 3.1-14.
 2022-03-15 22:14:44 +01:00
Ricardo Wurmus
183581903e
gnu: r-quanteda: Update to 3.2.1. 
* gnu/packages/cran.scm (r-quanteda): Update to 3.2.1.
 2022-03-15 22:14:44 +01:00
Ricardo Wurmus
37d4f83a2c
gnu: r-torch: Update to 0.7.2. 
* gnu/packages/cran.scm (r-torch): Update to 0.7.2.
 2022-03-15 22:14:44 +01:00
Ricardo Wurmus
e8104d1d63
gnu: r-caret: Update to 6.0-91. 
* gnu/packages/cran.scm (r-caret): Update to 6.0-91.
 2022-03-15 22:14:44 +01:00
Ricardo Wurmus
e910b87515
gnu: r-imager: Update to 0.42.13. 
* gnu/packages/cran.scm (r-imager): Update to 0.42.13.
 2022-03-15 22:14:44 +01:00
Ricardo Wurmus
2cc2e440dc
gnu: r-seewave: Update to 2.2.0. 
* gnu/packages/cran.scm (r-seewave): Update to 2.2.0.
 2022-03-15 22:14:44 +01:00
Ricardo Wurmus
0d76859355
gnu: r-sysfonts: Update to 0.8.8. 
* gnu/packages/cran.scm (r-sysfonts): Update to 0.8.8.
 2022-03-15 22:14:43 +01:00
Ricardo Wurmus
13bb00192c
gnu: r-bio3d: Update to 2.4-3. 
* gnu/packages/cran.scm (r-bio3d): Update to 2.4-3.
 2022-03-15 22:14:43 +01:00
Ricardo Wurmus
f4f1a353ae
gnu: r-pracma: Update to 2.3.8. 
* gnu/packages/cran.scm (r-pracma): Update to 2.3.8.
 2022-03-15 22:14:43 +01:00
Ricardo Wurmus
84e5b9fac2
gnu: r-parameters: Update to 0.17.0. 
* gnu/packages/cran.scm (r-parameters): Update to 0.17.0.
 2022-03-15 22:14:43 +01:00
Ricardo Wurmus
766f8ea02c
gnu: r-styler: Update to 1.7.0. 
* gnu/packages/cran.scm (r-styler): Update to 1.7.0.
[propagated-inputs]: Remove r-backports, r-glue, and r-xfun.
 2022-03-15 22:14:43 +01:00
Ricardo Wurmus
c0d132d4d1
gnu: r-mcmcpack: Update to 1.6-1. 
* gnu/packages/cran.scm (r-mcmcpack): Update to 1.6-1.
 2022-03-15 22:14:43 +01:00
Ricardo Wurmus
03800a95b0
gnu: r-float: Update to 0.2-6.1. 
* gnu/packages/cran.scm (r-float): Update to 0.2-6.1.
 2022-03-15 22:14:43 +01:00
Ricardo Wurmus
15970c6e21
gnu: r-sf: Update to 1.0-7. 
* gnu/packages/cran.scm (r-sf): Update to 1.0-7.
 2022-03-15 22:14:42 +01:00
Ricardo Wurmus
4a3b7e497b
gnu: r-udunits2: Update to 0.13.2.1. 
* gnu/packages/cran.scm (r-udunits2): Update to 0.13.2.1.
 2022-03-15 22:14:42 +01:00
Ricardo Wurmus
4e8e54a47f
gnu: r-gamlss-dist: Update to 6.0-3. 
* gnu/packages/cran.scm (r-gamlss-dist): Update to 6.0-3.
 2022-03-15 22:14:42 +01:00
Ricardo Wurmus
507123b893
gnu: r-densityclust: Update to 0.3.2. 
* gnu/packages/cran.scm (r-densityclust): Update to 0.3.2.
 2022-03-15 22:14:42 +01:00
Ricardo Wurmus
b1d358e742
gnu: r-tidytree: Update to 0.3.9. 
* gnu/packages/cran.scm (r-tidytree): Update to 0.3.9.
[propagated-inputs]: Add r-pillar.
 2022-03-15 22:14:42 +01:00
Ricardo Wurmus
edbe5a7c31
gnu: r-admisc: Update to 0.25. 
* gnu/packages/cran.scm (r-admisc): Update to 0.25.
 2022-03-15 22:14:42 +01:00
Ricardo Wurmus
464580c907
gnu: r-fmsb: Update to 0.7.3. 
* gnu/packages/cran.scm (r-fmsb): Update to 0.7.3.
 2022-03-15 22:14:42 +01:00
Ricardo Wurmus
f180f43645
gnu: r-circular: Update to 0.4-94. 
* gnu/packages/cran.scm (r-circular): Update to 0.4-94.
 2022-03-15 22:14:42 +01:00
Ricardo Wurmus
51cb6e9a4e
gnu: r-rcppgsl: Update to 0.3.11. 
* gnu/packages/cran.scm (r-rcppgsl): Update to 0.3.11.
 2022-03-15 22:14:41 +01:00
Ricardo Wurmus
e796678766
gnu: r-glmmtmb: Update to 1.1.3. 
* gnu/packages/cran.scm (r-glmmtmb): Update to 1.1.3.
[native-inputs]: Add r-rmarkdown.
 2022-03-15 22:14:41 +01:00
Ricardo Wurmus
aa9a3a69e0
gnu: r-tmb: Update to 1.8.0. 
* gnu/packages/cran.scm (r-tmb): Update to 1.8.0.
 2022-03-15 22:14:41 +01:00
Ricardo Wurmus
d147bf7a1f
gnu: r-bayesplot: Update to 1.9.0. 
* gnu/packages/cran.scm (r-bayesplot): Update to 1.9.0.
[propagated-inputs]: Add r-posterior.
 2022-03-15 22:14:41 +01:00
Ricardo Wurmus
6515fff157
gnu: r-gam: Update to 1.20.1. 
* gnu/packages/cran.scm (r-gam): Update to 1.20.1.
 2022-03-15 22:14:41 +01:00
Ricardo Wurmus
56ba9331df
gnu: r-precrec: Update to 0.12.9. 
* gnu/packages/cran.scm (r-precrec): Update to 0.12.9.
 2022-03-15 22:14:41 +01:00
Ricardo Wurmus
95350fb1d7
gnu: r-flextable: Update to 0.7.0. 
* gnu/packages/cran.scm (r-flextable): Update to 0.7.0.
 2022-03-15 22:14:41 +01:00
Ricardo Wurmus
4199e47865
gnu: r-renv: Update to 0.15.4. 
* gnu/packages/cran.scm (r-renv): Update to 0.15.4.
 2022-03-15 22:14:41 +01:00
Ricardo Wurmus
d0321cd18f
gnu: r-maptools: Update to 1.1-3. 
* gnu/packages/cran.scm (r-maptools): Update to 1.1-3.
 2022-03-15 22:14:40 +01:00
Ricardo Wurmus
8fae1d0c9b
gnu: r-xfun: Update to 0.30. 
* gnu/packages/cran.scm (r-xfun): Update to 0.30.
 2022-03-15 22:14:40 +01:00
Ricardo Wurmus
145f5db8ba
gnu: r-seriation: Update to 1.3.3. 
* gnu/packages/cran.scm (r-seriation): Update to 1.3.3.
 2022-03-15 22:14:40 +01:00
Ricardo Wurmus
b4ce58746e
gnu: r-ddalpha: Update to 1.3.12. 
* gnu/packages/cran.scm (r-ddalpha): Update to 1.3.12.
 2022-03-15 22:14:40 +01:00
Ricardo Wurmus
9995771129
gnu: r-linprog: Update to 0.9-4. 
* gnu/packages/cran.scm (r-linprog): Update to 0.9-4.
 2022-03-15 22:14:40 +01:00
Ricardo Wurmus
8c9f00644c
gnu: r-dimred: Update to 0.2.5. 
* gnu/packages/cran.scm (r-dimred): Update to 0.2.5.
 2022-03-15 22:14:40 +01:00
Ricardo Wurmus
3c8dd4448a
gnu: r-fitdistrplus: Update to 1.1-8. 
* gnu/packages/cran.scm (r-fitdistrplus): Update to 1.1-8.
 2022-03-15 22:14:40 +01:00
Ricardo Wurmus
96554a0d47
gnu: r-rcppthread: Update to 2.1.2. 
* gnu/packages/cran.scm (r-rcppthread): Update to 2.1.2.
 2022-03-15 22:14:40 +01:00
Ricardo Wurmus
8fb8b40c05
gnu: r-rcpp: Update to 1.0.8.2. 
* gnu/packages/cran.scm (r-rcpp): Update to 1.0.8.2.
 2022-03-15 22:14:40 +01:00
Ricardo Wurmus
013395f942
gnu: r-ape: Update to 5.6-2. 
* gnu/packages/cran.scm (r-ape): Update to 5.6-2.
 2022-03-15 22:14:39 +01:00
Ricardo Wurmus
d0000637c5
gnu: r-rticles: Update to 0.23. 
* gnu/packages/cran.scm (r-rticles): Update to 0.23.
 2022-03-15 22:14:39 +01:00
Ricardo Wurmus
9cd04ea305
gnu: r-emdist: Update to 0.3-2. 
* gnu/packages/cran.scm (r-emdist): Update to 0.3-2.
 2022-03-15 22:14:39 +01:00
Ricardo Wurmus
f9172cf611
gnu: r-datawizard: Update to 0.3.0. 
* gnu/packages/cran.scm (r-datawizard): Update to 0.3.0.
 2022-03-15 22:14:39 +01:00
Ricardo Wurmus
e378e7a855
gnu: liblantern: Update to 0.7.2. 
* gnu/packages/machine-learning.scm (liblantern): Update to 0.7.2.
 2022-03-15 22:14:39 +01:00
Efraim Flashner
652b26d489
gnu: ncdu2: Update to 2.1. 
* gnu/packages/ncdu.scm (ncdu2): Update to 2.1.
 2022-03-15 22:29:11 +02:00
Efraim Flashner
bb9b3645e8
gnu: mariadb: Fix building for powerpc-linux. 
* gnu/packages/databases.scm (mariadb)[arguments]: Add custom phase for
powerpc-linux to apply patch.
[native-inputs]: When building for powerpc-linux add patch and a patch
file.
* gnu/packages/patches/mariadb-link-libatomic.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
 2022-03-15 22:20:15 +02:00
jgart
32cf6a8e87
gnu: zig: Update to 0.9.1. 
* gnu/packages/zig.scm (zig): Update to 0.9.1.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2022-03-15 21:55:46 +02:00
Ricardo Wurmus
231841f9b9
gnu: r-afex: Add vignette builder. 
* gnu/packages/cran.scm (r-afex)[native-inputs]: Add r-r-rsp.
[arguments]: Add build phase to set HOME variable.
 2022-03-15 20:18:54 +01:00
Ricardo Wurmus
5b325ab18d
gnu: r-lme4: Update to 1.1-28. 
* gnu/packages/statistics.scm (r-lme4): Update to 1.1-28.
 2022-03-15 20:18:54 +01:00
Ricardo Wurmus
1ba0dd9cac
gnu: r-quantreg: Update to 5.88. 
* gnu/packages/statistics.scm (r-quantreg): Update to 5.88.
 2022-03-15 20:18:54 +01:00
Ricardo Wurmus
7ba037dc10
gnu: r-vgam: Update to 1.1-6. 
* gnu/packages/statistics.scm (r-vgam): Update to 1.1-6.
 2022-03-15 20:18:54 +01:00
Ricardo Wurmus
21abb27570
gnu: r-robust: Update to 0.7-0. 
* gnu/packages/statistics.scm (r-robust): Update to 0.7-0.
 2022-03-15 20:18:54 +01:00
Ricardo Wurmus
ce8de14973
gnu: r-rrcov: Update to 1.6-2. 
* gnu/packages/statistics.scm (r-rrcov): Update to 1.6-2.
 2022-03-15 20:18:54 +01:00
Ricardo Wurmus
77e7a09080
gnu: r-randomforest: Update to 4.7-1. 
* gnu/packages/statistics.scm (r-randomforest): Update to 4.7-1.
 2022-03-15 20:18:54 +01:00
Ricardo Wurmus
140be554d1
gnu: r-tidyr: Update to 1.2.0. 
* gnu/packages/statistics.scm (r-tidyr): Update to 1.2.0.
 2022-03-15 20:18:54 +01:00
Ricardo Wurmus
ca1bb35c50
gnu: r-tidyselect: Update to 1.1.2. 
* gnu/packages/statistics.scm (r-tidyselect): Update to 1.1.2.
 2022-03-15 20:18:54 +01:00
Ricardo Wurmus
93e5add9e2
gnu: r-domc: Update to 1.3.8. 
* gnu/packages/statistics.scm (r-domc): Update to 1.3.8.
 2022-03-15 20:18:54 +01:00
Ricardo Wurmus
ba2ccdf7b4
gnu: r-doparallel: Update to 1.0.17. 
* gnu/packages/statistics.scm (r-doparallel): Update to 1.0.17.
 2022-03-15 20:18:53 +01:00
Ricardo Wurmus
187bd9d74f
gnu: r-foreach: Update to 1.5.2. 
* gnu/packages/statistics.scm (r-foreach): Update to 1.5.2.
 2022-03-15 20:18:53 +01:00
Ricardo Wurmus
1141bcde2d
gnu: r-iterators: Update to 1.0.14. 
* gnu/packages/statistics.scm (r-iterators): Update to 1.0.14.
 2022-03-15 20:18:53 +01:00
Ricardo Wurmus
41ff5abb5c
gnu: r-xml: Update to 3.99-0.9. 
* gnu/packages/statistics.scm (r-xml): Update to 3.99-0.9.
 2022-03-15 20:18:53 +01:00
Ricardo Wurmus
0e407e53df
gnu: r-rsqlite: Update to 2.2.10. 
* gnu/packages/statistics.scm (r-rsqlite): Update to 2.2.10.
 2022-03-15 20:18:53 +01:00
Ricardo Wurmus
308c2841bf
gnu: r-brew: Update to 1.0-7. 
* gnu/packages/statistics.scm (r-brew): Update to 1.0-7.
 2022-03-15 20:18:53 +01:00
Ricardo Wurmus
fdfbc3926b
gnu: r-dplyr: Update to 1.0.8. 
* gnu/packages/statistics.scm (r-dplyr): Update to 1.0.8.
[propagated-inputs]: Remove r-ellipsis.
 2022-03-15 20:18:53 +01:00
Ricardo Wurmus
82661cdbb3
gnu: r-rlang: Update to 1.0.1. 
* gnu/packages/statistics.scm (r-rlang): Update to 1.0.1.
 2022-03-15 20:18:53 +01:00
Ricardo Wurmus
e7058ed633
gnu: r-crayon: Update to 1.5.0. 
* gnu/packages/statistics.scm (r-crayon): Update to 1.5.0.
 2022-03-15 20:18:53 +01:00
Ricardo Wurmus
cdf77791f1
gnu: r-yaml: Update to 2.3.5. 
* gnu/packages/statistics.scm (r-yaml): Update to 2.3.5.
 2022-03-15 20:18:53 +01:00
Ricardo Wurmus
30567b23b5
gnu: r-evaluate: Update to 0.15. 
* gnu/packages/statistics.scm (r-evaluate): Update to 0.15.
 2022-03-15 20:18:52 +01:00
Ricardo Wurmus
f7304f0afb
gnu: r-svglite: Update to 2.1.0. 
* gnu/packages/statistics.scm (r-svglite): Update to 2.1.0.
 2022-03-15 20:18:52 +01:00
Ricardo Wurmus
59212ce38a
gnu: r-gdtools: Update to 0.2.4. 
* gnu/packages/statistics.scm (r-gdtools): Update to 0.2.4.
[inputs]: Add fontconfig.
 2022-03-15 20:18:52 +01:00
Ricardo Wurmus
1f2816a3b1
gnu: r-ggdendro: Update to 0.1.23. 
* gnu/packages/statistics.scm (r-ggdendro): Update to 0.1.23.
 2022-03-15 20:18:52 +01:00
Ricardo Wurmus
5ca2a180c8
gnu: r-mgcv: Update to 1.8-39. 
* gnu/packages/statistics.scm (r-mgcv): Update to 1.8-39.
 2022-03-15 20:18:52 +01:00
Ricardo Wurmus
7f648ff20b
gnu: r-mockery: Update to 0.4.3. 
* gnu/packages/cran.scm (r-mockery): Update to 0.4.3.
 2022-03-15 20:18:52 +01:00
Ricardo Wurmus
b7ea496740
gnu: r-paws-common: Update to 0.3.16. 
* gnu/packages/cran.scm (r-paws-common): Update to 0.3.16.
 2022-03-15 20:18:52 +01:00
Ricardo Wurmus
bb7d87784d
gnu: r-keras: Update to 2.8.0. 
* gnu/packages/cran.scm (r-keras): Update to 2.8.0.
 2022-03-15 20:18:52 +01:00
Ricardo Wurmus
da46ff71d0
gnu: r-tensorflow: Update to 2.8.0. 
* gnu/packages/cran.scm (r-tensorflow): Update to 2.8.0.
 2022-03-15 20:18:52 +01:00
Ricardo Wurmus
0c854abb2f
gnu: r-qs: Update to 0.25.3. 
* gnu/packages/cran.scm (r-qs): Update to 0.25.3.
 2022-03-15 20:18:51 +01:00
Ricardo Wurmus
51eafee209
gnu: r-opencpu: Update to 2.2.7. 
* gnu/packages/cran.scm (r-opencpu): Update to 2.2.7.
 2022-03-15 20:18:51 +01:00
Ricardo Wurmus
070504923b
gnu: r-pdftools: Update to 3.1.0. 
* gnu/packages/cran.scm (r-pdftools): Update to 3.1.0.
[description]: Use complete sentences.
 2022-03-15 20:18:51 +01:00
Ricardo Wurmus
6e53ce2672
gnu: r-ragg: Update to 1.2.2. 
* gnu/packages/cran.scm (r-ragg): Update to 1.2.2.
 2022-03-15 20:18:51 +01:00
Ricardo Wurmus
b1fae9a855
gnu: r-mlr3tuning: Update to 0.12.0. 
* gnu/packages/cran.scm (r-mlr3tuning): Update to 0.12.0.
 2022-03-15 20:18:51 +01:00
Ricardo Wurmus
74bf3b55dc
gnu: r-mlr3: Update to 0.13.2. 
* gnu/packages/cran.scm (r-mlr3): Update to 0.13.2.
[propagated-inputs]: Add r-evaluate.
 2022-03-15 20:18:51 +01:00
Ricardo Wurmus
ece2ba8c57
gnu: r-scattermore: Update to 0.8. 
* gnu/packages/cran.scm (r-scattermore): Update to 0.8.
 2022-03-15 20:18:51 +01:00
Ricardo Wurmus
4b7368f12f
gnu: r-seqminer: Update to 8.4. 
* gnu/packages/cran.scm (r-seqminer): Update to 8.4.
 2022-03-15 20:18:51 +01:00
Ricardo Wurmus
e202b04e80
gnu: r-dials: Update to 0.1.0. 
* gnu/packages/cran.scm (r-dials): Update to 0.1.0.
[propagated-inputs]: Add r-hardhat and r-lifecycle.
 2022-03-15 20:18:50 +01:00
Ricardo Wurmus
f74a6e8096
gnu: r-rfast: Update to 2.0.6. 
* gnu/packages/cran.scm (r-rfast): Update to 2.0.6.
 2022-03-15 20:18:50 +01:00
Ricardo Wurmus
026aa0aec0
gnu: r-spatstat: Update to 2.3-3. 
* gnu/packages/cran.scm (r-spatstat): Update to 2.3-3.
[propagated-inputs]: Add r-spatstat-random.
 2022-03-15 20:18:50 +01:00
Ricardo Wurmus
2bb7c7095c
gnu: r-spatstat-linnet: Update to 2.3-2. 
* gnu/packages/cran.scm (r-spatstat-linnet): Update to 2.3-2.
[propagated-inputs]: Add r-spatstat-random.
 2022-03-15 20:18:50 +01:00
Ricardo Wurmus
b85b8aefdd
gnu: r-spatstat-core: Update to 2.4-0. 
* gnu/packages/cran.scm (r-spatstat-core): Update to 2.4-0.
[propagated-inputs]: Add r-spatstat-random.
 2022-03-15 20:18:50 +01:00
Ricardo Wurmus
1cbcb03a0e
gnu: r-spatstat-geom: Update to 2.3-2. 
* gnu/packages/cran.scm (r-spatstat-geom): Update to 2.3-2.
 2022-03-15 20:18:50 +01:00