Commit Graph

3945 Commits

Author SHA1 Message Date
Marius Bakke
0105f33a4d
gnu: ganeti: Adjust to GHC 8.10 / Stackage 18.10.
* gnu/packages/patches/ganeti-haskell-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/virtualization.scm (ganeti)[source](patches): Add it.
[arguments]: Add phase patch-version-constraints.
2021-10-11 21:53:31 +02:00
Marius Bakke
93f69b02a2
gnu: ganeti: Update to 3.0.1.
* gnu/packages/virtualization.scm (ganeti): Update to 3.0.1.
[source](patches): Remove obsolete.
* gnu/tests/ganeti.scm (%ganeti-os): Adjust network configuration so QEMU port
forwarding can work.
(run-ganeti-test): Remove unused port mapping.  Adjust and enable previously
failing test.
* gnu/packages/patches/ganeti-deterministic-manual.patch,
gnu/packages/patches/ganeti-drbd-compat.patch,
gnu/packages/patches/ganeti-os-disk-size.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2021-10-11 18:59:44 +02:00
Ludovic Courtès
b37fe44b7d
gnu: clang@11, clang@12: Do not refer to /lib on foreign distros.
Partly fixes <https://issues.guix.gnu.org/51088>.

* gnu/packages/patches/clang-11.0-libc-search-path.patch: Update.
* gnu/packages/patches/clang-12.0-libc-search-path.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/llvm.scm (clang-12): Use it.
2021-10-09 01:02:19 +02:00
Ludovic Courtès
f1b4f46f0a
gnu: clang@10: Do not refer to /lib on foreign distros.
Partly fixes <https://issues.guix.gnu.org/51088>.

* gnu/packages/patches/clang-10.0-libc-search-path.patch: Update.
2021-10-09 01:02:19 +02:00
Ludovic Courtès
46141bd372
gnu: clang@9: Do not refer to /lib on foreign distros.
Partly fixes <https://issues.guix.gnu.org/51088>.

* gnu/packages/patches/clang-9.0-libc-search-path.patch: Update.
2021-10-09 01:02:19 +02:00
Ludovic Courtès
66caab54b9
gnu: clang@7, clang@8: Do not refer to /lib on foreign distros.
Partly fixes <https://issues.guix.gnu.org/51088>.

* gnu/packages/patches/clang-7.0-libc-search-path.patch: Update.
* gnu/packages/patches/clang-8.0-libc-search-path.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/llvm.scm (clang-8): Use it.
2021-10-09 01:02:18 +02:00
Lars-Dominik Braun
c8a7ba621b
gnu: pigx-scrnaseq: Remove dependency on pandoc-citeproc.
* gnu/packages/patches/pigx-scrnaseq-no-citeproc.patch: Add patch.
* gnu/local.mk: Register it.
* gnu/packages/bioinformatics.scm (pigx-scrnaseq)[source]: Use it.
[native-inputs]: Add automake/autoconf.
2021-10-08 09:13:55 +02:00
Lars-Dominik Braun
26488f63b8
gnu: pigx-rnaseq: Remove dependency on pandoc-citeproc.
* gnu/packages/patches/pigx-rnaseq-no-citeproc.patch: Add patch.
* gnu/local.mk: Register it.
* gnu/packages/bioinformatics.scm (pigx-rnaseq)[source]: Use it.
[native-inputs]: Add automake/autoconf.
2021-10-08 09:13:55 +02:00
Lars-Dominik Braun
07f2e4993b
gnu: pigx-chipseq: Remove dependency on pandoc-citeproc.
* gnu/packages/patches/pigx-chipseq-no-citeproc.patch: Add patch.
* gnu/local.mk: Register it.
* gnu/packages/bioinformatics.scm (pigx-chipseq)[source]: Use it.
[native-inputs]: Add automake/autoconf.
2021-10-08 09:13:54 +02:00
Lars-Dominik Braun
e51a3f4a72
gnu: pigx-sars-cov2-ww: Remove dependency on pandoc-citeproc.
* gnu/packages/patches/pigx-sars-cov2-ww-no-citeproc.patch: Add patch.
* gnu/local.mk: Register it.
* gnu/packages/bioinformatics.scm (pigx-sars-cov2-ww)[source]: Use it.
[native-inputs]: Add automake/autoconf.
2021-10-08 09:13:54 +02:00
Lars-Dominik Braun
fb1ffc53ba
gnu: pigx-bsseq: Remove dependency on pandoc-citeproc.
* gnu/packages/patches/pigx-bsseq-no-citeproc.patch: Add patch.
* gnu/local.mk: Register it.
* gnu/packages/bioinformatics.scm (pigx-bsseq)[source]: Use it.
[native-inputs]: Add automake/autoconf.
2021-10-08 09:13:54 +02:00
Lars-Dominik Braun
7eb9fe4e53
gnu: ngless: Fix build.
Apply upstream patch to restore compatibility with current Stackage.

* gnu/packages/patches/ngless-unliftio.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/bioinformatics.scm (ngless): Use it.
2021-10-08 09:13:53 +02:00
Xinglu Chen
ed044023d7
gnu: idris: Fix build.
Backport some commits from upstream.

* gnu/packages/patches/idris-build-with-haskeline-0.8.patch:
* gnu/packages/patches/idris-build-with-megaparsec-9.patch: New patches
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/idris.scm (idris): Use them.

Signed-off-by: Lars-Dominik Braun <lars@6xq.net>
2021-10-08 09:13:53 +02:00
Lars-Dominik Braun
2a1b6c0dbf
gnu: hedgewars: Fix build.
* gnu/packages/patches/hedgewars-network-bsd.patch: Import upstream patch.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/games.scm (hedgewars): Use it.
2021-10-08 09:13:53 +02:00
Lars-Dominik Braun
a389190855
gnu: cabal-install: Build with GHC 8.10.
* gnu/packages/patches/cabal-install-base16-bytestring1.0.patch: New patch.
* gnu/packages/patches/cabal-install-ghc8.10.patch: Ditto.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/haskell-apps.scm (cabal-install) [source]: Use them.
2021-10-08 09:13:53 +02:00
Lars-Dominik Braun
b97f549b14
gnu: Update Haskell ecosystem.
Bump packages’ versions to the lastest Stackage or Hackage
release. Since packages are interdependent, do so in a single commit.

525 packages have been updated.

These packages have been removed, because they fail to build, have no
newer version available and no dependencies:

corrode
ghc-easytest
ghc-edisonapi
ghc-edisoncore
ghc-pandoc-types
ghc-regex-tdfa-text

These have been removed, because they are no longer required:

ghc-happy-1.19.9
ghc-prettyprinter-1.6
ghc-protolude-0.3

ghc-pandoc-citeproc and pandoc-citeproc have been removed, because pandoc
does not use them any more.

Co-authored-by: Xinglu Chen <public@yoctocell.xyz>
2021-10-08 09:13:52 +02:00
Julien Lepiller
a3d528fa24
gnu: ocaml-cairo2: Update to 0.6.2.
* gnu/packages/ocaml.scm (ocaml-cairo2): Update to 0.6.2.
* gnu/packages/patches/ocaml-cairo2-caml_ba_array-fix.patch: Remove
file.
* gnu/local.scm (dist_patch_DATA): Remove it.
2021-10-08 04:34:07 +02:00
Greg Hogan
04c5d89482
gnu: ceph: Fix breaking change in snappy.
* gnu/packages/storage.scm (ceph)[source]: Add patch.
* gnu/packages/patches/ceph-fix-snappy-breaking-change.patch: New file.
* gnu/local.mk: Add it.

Signed-off-by: Marius Bakke <marius@gnu.org>
2021-10-08 00:00:21 +02:00
Guillaume Le Vaillant
99d288a6b1
gnu: llvm-3.6: Fix build.
* gnu/packages/patches/llvm-3.6-fix-build-with-gcc-10.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/llvm.scm (llvm-3.6)[source]: Use it.
2021-10-07 14:21:25 +02:00
Mathieu Othacehe
03f99e14ed
gnu: Add jsoncpp-with-pkg-version.
* gnu/packages/patches/jsoncpp-pkg-config-version: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/serialization.scm (jsoncpp-with-pkg-version): New variable.
2021-10-06 06:59:12 +00:00
Mathieu Othacehe
f4d3e7b82b
gnu: gdb: Fix cross-compilation for Hurd.
* gnu/packages/patches/gdb-hurd.patch: Update it.
* gnu/packages/gdb.scm (gdb)[source]: Add it.
2021-10-05 19:20:25 +00:00
Ryan Sundberg via Guix-patches via
9aaf402a37
gnu: php: Patch failing test case.
Fixes a failing test case in PHP (Zend/tests/bug74093.phpt).  See
<https://github.com/php/php-src/pull/7555/files> for upstream status.

* gnu/packages/php.scm (php)[source]: Add patch.
* gnu/packages/patches/php-bug-74093-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2021-10-05 13:45:29 +02:00
Mathieu Othacehe
1a244b7814
gnu: p11-kit: Fix Hurd build.
* gnu/packages/patches/p11-kit-hurd.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/tls.scm (p11-kit)[native-inputs]: Add autoconf, automake,
gettext and libtool when targeting Hurd.
[inputs]: Add libbsd and hurd-patch when targeting hurd.
[arguments]: Add 'apply-hurd-patch and 'bootstrap phases when targeting Hurd.
2021-10-05 08:46:57 +00:00
Tobias Geerinckx-Rice
9f55a39cf1
gnu: diffoscope: Update to 186.
* gnu/packages/diffoscope.scm (diffoscope): Update to 186.
[source]: Add patch.
[arguments]: Add a new 'fix-failing-tests phase.
Don't explicitly return #t from phases.
* gnu/packages/patches/diffoscope-fix-test_item3_deflate_llvm_bitcode.patch:
New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2021-10-04 21:21:11 +02:00
Tobias Geerinckx-Rice
4d5f7986d6
gnu: libcacard: Update to 2.8.1.
* gnu/packages/spice.scm (libcacard): Update to 2.8.1.
[source]: Remove patch.
* gnu/packages/patches/libcacard-unknown-variable.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2021-10-04 13:31:36 +02:00
Jonathan Brielmaier
f531c977a1
gnu: range-v3: Fix build.
* gnu/packages/patches/range-v3-build-with-gcc10.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/cpp.scm (range-v3)[source]: Use patch.
[native-inputs]: Add gcc@9 for a succesful build.
2021-10-03 19:53:56 +00:00
Tobias Geerinckx-Rice
413f8f3fa5
gnu: hexchat: Update to 2.16.0.
* gnu/packages/messaging.scm (hexchat): Update to 2.16.0.
[source]: Remove patch.
[inputs]: Remove libnotify and libproxy.  Upgrade python-2 to python@3.
Add python-cffi and bash-minimal.
[arguments]: Don't explicitly return #t from phases.
Add a new 'wrap-program phase.
2021-10-03 21:49:54 +02:00
Mathieu Othacehe
31cf1530a4
gnu: gdm: Fix the wayland session wrapper patch.
Update the following patch that no longer applies since the 40.1 version.

* gnu/packages/patches/gdm-wayland-session-wrapper-from-env.patch: Update it.
2021-10-03 17:56:52 +00:00
Tobias Geerinckx-Rice
9b9c74eaa7
gnu: ccache: Update to 4.4.2.
* gnu/packages/ccache.scm (ccache): Update to 4.4.2.
[source]: Remove patch.
[arguments]: Substitute nonexistent compgen.
* gnu/packages/patches/ccache-fix-basedir-test.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2021-10-03 19:23:49 +02:00
Josselin Poiret
db4681a4c1
services: gdm: Add Wayland support.
* gnu/packages/patches/gdm-wayland-session-wrapper-from-env.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gnome.scm (gdm): Use it.
* gnu/services/xorg.scm (<gdm-configuration>)[wayland-session]: New field.
(gdm-wayland-session-wrapper): New procedure.
(gdm-configuration-file): Point to this new procedure.
* doc/guix.texi (X Window): Update it.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2021-10-02 17:24:00 +00:00
Josselin Poiret
5c3f0c3e03
gnu: Add Wayland support for GDM.
Add the optional flag `wayland?` in `gdm-configuration` to launch GDM with
Wayland, enabling the use of Wayland sessions with GDM.

* gnu/packages/patches/gdm-remove-hardcoded-xwayland-path.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gnome.scm (gdm): Use it.
* gnu/services/xorg.scm (<gdm-configuration>)[wayland?]: New field.
(gdm-configuration): Honor it.
(gdm-shepherd-service): Add the XCURSOR_PATH environment variable.
* doc/guix.texi (X Window): Document it

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2021-10-02 17:17:44 +00:00
Mathieu Othacehe
129875d648
gnu: gnome-shell: Update to 40.5.
Remove the theme patch that does not apply anymore because the CSS files have
been revamped.

* gnu/packages/patches/gnome-shell-CVE-2020-17489.patch: Remove it.
* gnu/packages/patches/gnome-shell-theme: Remove it.
* gnu/packages/patches/gnome-shell-disable-test.patch: Update it.
* gnu/local.mk (DIST_PATCH_DATA): Update it.
* gnu/packages/gnome.scm (gnome-shell): Update to 40.5.
[source]: Fix the URI. Update the patches. Remote the snippet.
[arguments]: Remove trailing #t.
<#:phases>: Add a 'skip-gtk-update-icon-cache phase. Remove the
'convert-logo-to-png phase. Remove the inkscape disallowed reference.
[native-inputs]: Remove inkscape. Add hicolor-icon-theme.
[inputs]: Add gtk and graphene.
[properties]: Remove it.
2021-10-02 10:54:39 +00:00
Mathieu Othacehe
96b755b42a
gnu: gnome-online-miners: Fix build.
* gnu/packages/patches/gnome-online-miners-tracker-3.patch: New file.
* gnu/local.mk (DIST_PATCH_DATA): Add it.
* gnu/packages/gnome.scm (gnome-online-miners)[source]: Use it.
[arguments]: Add a 'fix-configure and a 'autoreconf phase.
[inputs]: Add autoconf, automake and libtool.
2021-10-02 10:54:39 +00:00
Mathieu Othacehe
367d2d73eb
gnu: gdm: Update to 40.1.
* gnu/packages/patches/gdm-elogind-support.patch: New file.
* gnu/packages/patches/gdm-default-session.patch: Update it.
* gnu/local.mk (DIST_PATCH_DATA): Add the new patch.
* gnu/packages/gnome.scm (gdm): Update to 40.1.
[source]: Add the gdm-elogind-support support.
[build-system]: Switch to meson-build-system.
[arguments]<#:glib-or-gtk>: Set to true.
<#:configure-flags>: Convert to meson options. Add logind-provider,
systemsystemunitdir and systemduserunitdir options.
<#:phases>{pre-configure}: Remove the libelogind intoduction that is now
handled by the patch. Remove trailing #t.
[inputs]: Add eudev.
2021-10-02 10:54:38 +00:00
Mathieu Othacehe
c1be2c6b8b
gnu: gvfs: Update to 1.48.1.
* gnu/packages/patches/gvfs-add-support-for-libplist-2.2.patch: Remove it.
* gnu/local.mk (DIST_PATCH_DATA): Update it.
* gnu/packages/gnome.scm (gvfs)[source]: Remove the patch.
[inputs]: Switch to fuse@3 and add gsettings-desktop-schemas.
[properties]: Remove it.
[description]: Wrap it.
2021-10-02 10:54:37 +00:00
Mathieu Othacehe
1d8bb73d3d
gnu: gnome-todo: Update to 40.1.
* gnu/packages/patches/gnome-todo-delete-esource-duplicate.patch: Remove it.
* gnu/local.mk (DIST_PATCH_DATA): Update it.
* gnu/packages/gnome.scm (gnome-todo): Update to 40.1.
[source]: Fix the URL.
[arguments]: Remove the 'wrap-gnome-todo phase and add a
'skip-gtk-update-icon-cache phase. Disable the tests.
[native-inputs]: Switch from gtk+ to gtk.
[inputs]: Add gtk, libadwaita and libportal.
2021-10-02 10:54:16 +00:00
Raghav Gururajan
ef5b32310b
gnu: Add gtk.
* gnu/packages/gtk.scm (gtk): New variable.
* gnu/packages/patches/gtk4-respect-GUIX_GTK4_PATH.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2021-10-02 10:54:13 +00:00
Thiago Jung Bauermann
ed756b4709
gnu: gdb-9.2: Fix build with GCC 10 on powerpc64le-linux.
* gnu/packages/patches/gdb-9.2-sim-ppc-fno-common.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gdb.scm (gdb-9.2)[source]: Use it.
2021-10-01 09:42:54 +00:00
Mathieu Othacehe
b77782f702
gnu: guile-email: Fix build.
* gnu/packages/patches/guile-email-fix-tests.patch: New file.
* gnu/local.mk (DIST_PATCH_DATA): Add it.
* gnu/packages/guile-xyz.scm (guile-email): Use it.
2021-09-29 12:59:38 +00:00
Efraim Flashner
8d02c2c39e
gnu: mariadb: Update to 10.5.12.
* gnu/packages/databases.scm (mariadb): Update to 10.5.12.
[source]: Remove patches.
[arguments]: In custom 'adjust-tests phase, update list of skipped
tests. Also remove tests already listed in mysql-test/unstable-tests.
* gnu/packages/patches/mariadb-CVE-2021-27928.patch,
gnu/packages/patches/mariadb-cmake-compat.patch: Remove files.
* gnu/local.mk (dist_patch_DATA): Remove them.
2021-09-29 11:00:32 +03:00
Mathieu Othacehe
26cb0c3960
gnu: syslinux: Fix build.
* gnu/packages/patches/syslinux-gcc10.patch: New file.
* gnu/packages/patches/syslinux-strip-gnu-property.patch: New file.
* gnu/local.mk (DIST_PATCH_DATA): Add them.
* gnu/packages/bootloaders.scm (syslinux)[source]: Use them.
[arguments]: Only strip debug symbols.
2021-09-28 12:39:30 +00:00
Guillaume Le Vaillant
1623e6023b
gnu: sbcl-burgled-batteries3: Fix compiling with sbcl >= 2.1.6.
* gnu/packages/patches/sbcl-burgled-batteries3-fix-signals.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/lisp-xyz.scm (sbcl-burgled-batteries3)[source]: Use it.
2021-09-28 11:37:02 +02:00
Guillaume Le Vaillant
dce9b98d55
gnu: sbcl-png: Fix compiling with sbcl >= 2.1.6.
* gnu/packages/patches/sbcl-png-fix-sbcl-compatibility.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/lisp-xyz.scm (sbcl-png)[source]: Use it.
2021-09-28 10:46:40 +02:00
Tobias Geerinckx-Rice
85d757b53d
gnu: ccache: Update to 4.4.1.
* gnu/packages/ccache.scm (ccache): Update to 4.4.1.
[source]: Add patch.
[arguments]: Remove explicit #t return values from phases.
* gnu/packages/patches/ccache-fix-basedir-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2021-09-28 02:15:35 +02:00
Vinicius Monego
6e5e60a20c
gnu: Add xgboost.
* gnu/packages/machine-learning.scm (xgboost): New variable.
* gnu/packages/patches/xgboost-use-system-dmlc-core.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Leo Famulari <leo@famulari.name>
2021-09-25 16:06:28 -04:00
Liliana Marie Prikler
719bbcc15e
Update copyright assignments for Liliana Marie Prikler.
* doc/guix.texi: Update copyright name for Liliana Marie Prikler.
* gnu/packages/build-tools.scm: Update copyright name and email for Liliana
Marie Prikler.
* gnu/packages/convmv.scm: Likewise.
* gnu/packages/emacs-xyz.scm: Likewise.
* gnu/packages/emacs.scm: Likewise.
* gnu/packages/esolangs.scm: Likewise.
* gnu/packages/game-development.scm: Likewise.
* gnu/packages/games.scm: Likewise.
* gnu/packages/gnome-xyz.scm: Likewise.
* gnu/packages/gnome.scm: Likewise.
* gnu/packages/gstreamer.scm: Likewise.
* gnu/packages/guile-xyz.scm: Likewise.
* gnu/packages/minetest.scm: Likewise.
* gnu/packages/music.scm: Likewise.
* gnu/packages/patches/minetest-add-MINETEST_MOD_PATH.patch: Likewise.
* gnu/packages/patches/ppsspp-disable-upgrade-and-gold.patch: Likewise.
* gnu/packages/patches/webkitgtk-bind-all-fonts.patch: Likewise.
* gnu/packages/python-xyz.scm: Likewise.
* gnu/packages/unicode.scm: Likewise.
* gnu/packages/xorg.scm: Likewise.
* gnu/services/sound.scm: Likewise.
* guix/build-system/renpy.scm: Likewise.
* guix/build/emacs-utils.scm: Likewise.
* guix/build/renpy-build-system.scm: Likewise.
2021-09-25 09:34:36 +02:00
Ludovic Courtès
d326dec811
gnu: python-pytorch: Unbundle NNPACK.
* gnu/packages/machine-learning.scm (python-pytorch)[source]: Delete
"third_party/NNPACK".
[inputs]: Add NNPACK.
[propagated-inputs]: Remove PYTHON-PEACHPY.
* gnu/packages/patches/python-pytorch-system-libraries.patch: Remove
hunk modifying NNPACK; add hunk to allow the use of our own NNPACK.
2021-09-24 13:48:50 +02:00
Ludovic Courtès
8df301d467
gnu: Add NNPACK.
* gnu/packages/machine-learning.scm (nnpack): New variable.
* gnu/packages/patches/nnpack-system-libraries.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2021-09-24 13:48:49 +02:00
Marius Bakke
6a805f22a3
gnu: ungoogled-chromium: Update to 93.0.4577.82-0.3f62dbc.
* gnu/packages/patches/ungoogled-chromium-ffmpeg-compat.patch,
gnu/packages/patches/ungoogled-chromium-system-nspr.patch: New files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/chromium.scm (%preserved-third-party-files): Adjust for version
93.
(%chromium-version): Set to 93.0.4577.82.
(%ungoogled-revision): Set to 93.0.4577.82-1-2-g3f62dbc.
(%debian-patches): Remove 'system/nspr.patch'.
(%ungoogled-origin): Update source hash.
(%guix-patches): Add 'ungoogled-chromium-ffmpeg-compat.patch' and
'ungoogled-chromium-system-nspr.patch'.
(ungoogled-chromium-snippet): Remove PYTHON-2 usage.  Don't unbundle
'snappy'.
(libvpx/chromium): Remove variable.
(ungoogled-chromium)[source]: Update hash.
[arguments]: Add "is_cfi=false", "use_thin_lto=false", and
"blink_enable_generated_code_formatting=false".
[native-inputs]: Change CLANG-11 to CLANG-12.  Change NODE to NODE-LTS.  Add
PYTHON-BEAUTIFULSOUP4 and PYTHON-HTML5LIB.  Remove PYTHON-2.
[inputs]: Change LIBVPX/CHROMIUM to LIBVPX.
2021-09-23 12:05:53 +02:00
Marius Bakke
855e34d44f
gnu: LLVM, Clang: Update to 12.0.1.
* gnu/packages/patches/clang-12-tools-extra-directory.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/llvm.scm (llvm-12, clang-runtime-12): Update to 12.0.1.
(clang-12): Likewise.  Remove obsolete patch.
2021-09-23 12:05:53 +02:00
Leo Famulari
1e3262d74f
gnu: ntfs-3g: Update to 2021.8.22 [security fixes].
The upstream security advisory is named NTFS3G-SA-2021-0001.

Fixes CVE-2021-33285, CVE-2021-35269, CVE-2021-35268, CVE-2021-33289,
CVE-2021-33286, CVE-2021-35266, CVE-2021-33287, CVE-2021-35267, CVE-2021-39251,
CVE-2021-39252, CVE-2021-39253, CVE-2021-39254, CVE-2021-39255, CVE-2021-39256,
CVE-2021-39257, CVE-2021-39258, CVE-2021-39259, CVE-2021-39260, CVE-2021-39261,
CVE-2021-39262, CVE-2021-39263.

For more information:

https://seclists.org/oss-sec/2021/q3/139

* gnu/packages/linux.scm (ntfs-3g): Update to 2021.8.22.
[source]: Remove obsolete patch.
* gnu/packages/patches/ntfs-3g-CVE-2019-9755.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2021-09-21 13:28:02 -04:00
Guillaume Le Vaillant
19c9c266ae
gnu: mpg321: Fix compiling with gcc 10.
* gnu/packages/patches/mpg321-gcc-10.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/mp3.scm (mpg321)[source]: Use it.
2021-09-18 15:31:18 +02:00
muradm
e8d80d0456
gnu: gnunet: Fix libmicrohttpd test case using SSL3.
* gnu/packages/patches/libmicrohttpd-0.9.73-test-ssl3.patch:
Patch for failing test case as suggested by libmicrohttpd mailing list
* gnu/packages/gnunet.scm (libmicrohttpd): use patch
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-09-18 12:09:40 +02:00
Mathieu Othacehe
cfc814754e
gnu: cheese: Fix build.
* gnu/packages/patches/cheese-vala-update.patch: New file.
* gnu/local.mk (DIST_PATCH_DATA): Add it.
* gnu/packages/gnome.scm (cheese)[source]: Use it.
2021-09-17 17:59:05 +02:00
Marius Bakke
5c3cb22c9b
Merge branch 'master' into core-updates-frozen
Conflicts:
	gnu/packages/bioinformatics.scm
	gnu/packages/chez.scm
	gnu/packages/docbook.scm
	gnu/packages/ebook.scm
	gnu/packages/gnome.scm
	gnu/packages/linux.scm
	gnu/packages/networking.scm
	gnu/packages/python-web.scm
	gnu/packages/python-xyz.scm
	gnu/packages/tex.scm
	gnu/packages/version-control.scm
	gnu/packages/xml.scm
	guix/build-system/dune.scm
	guix/build-system/go.scm
	guix/build-system/linux-module.scm
	guix/packages.scm
2021-09-17 01:25:52 +02:00
Thiago Jung Bauermann via Guix-patches via
b3ee04cde7
gnu: xygrib: Fix finding resources in the data directory.
Currently, if you start up XyGrib it will not show icons in the toolbar
buttons, translated strings in the UI nor the map in the main view.  These
are all items stored in the data directory, which XyGrib can’t find.

Backport upstream PR 235 (already merged upstream) which makes it use XDG
directories correctly.

As a bonus, the PR also contains a fix to find libjpeg, so we don’t need
the substitution for that anymore.

* gnu/packages/patches/xygrib-fix-finding-data.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/geo.scm (xygrib)[source]: Use it.
  [arguments]<#:configure-flags>: Pass ‘-DGNU_PACKAGE=ON’.
  [arguments]<#:phases>{patch-directories}: Remove fix to find libjpeg.
  Remove trailing ‘#t’.
[native-search-paths]: Add ‘XDG_DATA_DIRS’.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2021-09-16 09:49:31 +02:00
Guillaume Le Vaillant
9cfa0078e6
gnu: python-random2: Fix building with python 3.9.
* gnu/packages/patches/python-random2-getrandbits-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/python-xyz.scm (python-random2)[source]: Use it.
2021-09-11 14:16:46 +02:00
Philip McGrath
fd22921490
gnu: racket: fix raco exe with non-minimal Racket
This commit backports an upstream repair for a bug exposed by Guix's
change in Racket 8.2 to make the `racket` package a layered/tethered
installation that chains to the `racket-minimal` package. When using a
layered/tethered installation, the `setup/variant` library would fail to
recognize the default Racet variant (CS, 3M, or CGC), leading to
confusing failures from `raco exe`, `create-embedding-executable`, and
other clients.

For further details, see <https://issues.guix.gnu.org/50118> and
<https://github.com/racket/racket/issues/3969>.

* gnu/packages/patches/racket-minimal-backport-1629887.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/racket.scm (racket-minimal)[source]: Use it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-09-10 17:30:55 +02:00
Sarah Morgensen
63cc4dd579
gnu: go-github-com-urfave-cli-v2: Fix tests when building with Go 1.17.
* gnu/packages/patches/go-github-com-urfave-cli-v2-fix-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/golang.scm (go-github-com-urfave-cli-v2)[origin]: Apply it.

Signed-off-by: Leo Famulari <leo@famulari.name>
2021-09-09 21:34:50 -04:00
Sarah Morgensen
f161f111e0
gnu: go-github-com-urfave-cli: Fix tests when building with Go 1.17.
* gnu/packages/patches/go-github-com-urfave-cli-fix-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/golang.scm (go-github-com-urfave-cli)[origin]: Apply it.

Signed-off-by: Leo Famulari <leo@famulari.name>
2021-09-09 21:34:50 -04:00
Maxim Cournoyer
173b6f6f15
gnu: mailutils: Update to 3.13.
* gnu/packages/patches/mailutils-fix-uninitialized-variable.patch: Remove
patch.
* gnu/local.mk (dist_patch_DATA): De-register it.
* gnu/packages/mail.scm (mailutils): Update to 3.13.  Remove the 2013
--with-sql option TODO comment; if someone needs that, they can send a patch.
[source]: Remove above patch.
[phases]{prepare-test-suite}: Also patch shell shebang in
'libmailutils/tests/lock.at' and 'imap4d/tests/testclient.c'.
[parallel-tests?]: Reinstate parallel tests.
[inputs]: Move m4 to...
[native-inputs]: ... here.  Add the autoconf, automake, gettext and libtool
quartet.
2021-09-09 20:48:31 -04:00
Ludovic Courtès
6d8c1a5e23
gnu: glibc@2.31: Fix build error.
* gnu/packages/patches/glibc-skip-c++.patch: New file.
* gnu/packages/base.scm (glibc-2.31)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
2021-09-08 21:45:43 +02:00
Guillaume Le Vaillant
de8e2a699c
gnu: binutils: Fix file decriptor leak.
* gnu/packages/patches/binutils-2.37-file-descriptor-leak.patch: New file.
* gnu/packages/local.mk (dist_patch_DATA): Add it.
* gnu/packages/base.scm (binutils)[source]: Use it.
2021-09-08 12:05:08 +02:00
Felix Gruber
d5a1206beb
gnu: librime: Fix build with GCC 10.
* gnu/packages/ibus.scm (librime)[source]: Add a patch that adds missing
includes.
* gnu/packages/patches/librime-fix-build-with-gcc10.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Leo Famulari <leo@famulari.name>
2021-09-07 14:12:36 -04:00
Ludovic Courtès
d9dfbf886d
Merge branch 'master' into core-updates-frozen 2021-09-07 14:19:08 +02:00
Xinglu Chen
550f4aa682
gnu: ocaml-ppx-variants-conv: Patch for building with ocaml-ppxlib.
The patch will make it build when building it with ocaml-ppxlib@0.23.0.

* gnu/packages/patches/ocaml-ppx-variants-ppxlib-api-change.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/ocaml.scm (ocaml-ppx-variants-conv): Apply the patch.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-09-06 23:27:40 +02:00
Ludovic Courtès
08005133ec
gnu: glibc-static: Fix static NSS support.
Support for static NSS broke in glibc 2.33, meaning that 'getpw' &
co. would always fail.  This patch backports the upstream fix to
reinstate it.

Reported by Marius Bakke.

* gnu/packages/patches/glibc-static-nss.patch: New file.
* gnu/packages/make-bootstrap.scm (glibc-for-bootstrap): Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
2021-09-06 13:50:00 +02:00
Felix Gruber
86af6091d8
gnu: c++-gsl: Fix build with GCC 10.
* gnu/packages/cpp.scm (c++-gsl)[source]: Add a patch from Debian
  to fix compilation of a test.
* gnu/packages/patches/c++-gsl-move-array-bounds-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2021-09-06 09:43:08 +02:00
Danny Milosavljevic
dd7df191b6
gnu: u-boot-nintendo-nes-classic-edition: Make it actually boot again.
* gnu/packages/patches/u-boot-nintendo-nes-serial.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add u-boot-nintendo-nes-serial.patch.
* gnu/packages/bootloaders.scm (u-boot-nintendo-nes-classic-edition): Downgrade to 2018.11.
[source]: Add patch.
[description]: Modify.
[native-inputs]: Add python-2.
2021-09-05 23:45:29 +02:00
Sarah Morgensen
48bd27863f
gnu: pipewire: Fix build with GCC 10.
* gnu/packages/patches/pipewire-0.2.7-fno-common.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/linux.scm (pipewire)[source]: Use it.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2021-09-05 11:01:45 +02:00
Lars-Dominik Braun
46ba1bb068
gnu: beets: Update to 1.5.0.
* gnu/packages/music.scm (beets) [version]: Update to 1.5.0.
[#:phases]: Keep testcase, switch to pytest and respect tests?.
[native-inputs]: Move plugin dependencies…
[inputs]: …here.
* gnu/packages/music.scm (beets-next): Mark as deprecated.
* gnu/packages/patches/beets-werkzeug-compat.patch: Delete patch.
* gnu/local.mk: Deregister it.
2021-09-04 14:53:35 +02:00
Simon Streit
ab12354c0a
gnu: python-mediafile: Update to 0.7.0.
Remove patch. It is now included in upstream release.

* gnu/packages/music.scm (python-mediafile): Update to 0.7.0.
* gnu/packages/patches/python-mediafile-wavpack.patch: Delete patch.
* gnu/local.mk: Deregister it.
2021-09-04 14:53:34 +02:00
Ludovic Courtès
7f50543d55
gnu: classpath-bootstrap: Work around miscompilation.
Fixes <https://issues.guix.gnu.org/49990>.

Previously, building 'ant-bootstrap' would fail in obscure ways.

* gnu/packages/patches/classpath-miscompilation.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/java.scm (classpath-bootstrap)[source]: Use it.
[arguments]: Remove 'remove-call-to-free' phase.
2021-09-03 11:38:43 +02:00
Ludovic Courtès
a5fb1f4eeb
gnu: mailutils: Look up Scheme variables in the right module.
Fixes <https://issues.guix.gnu.org/49295>.
Reported by Maxime Devos <maximedevos@telenet.be>.

* gnu/packages/patches/mailutils-variable-lookup.patch: New file.
* gnu/packages/mail.scm (mailutils)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
2021-09-01 23:41:41 +02:00
Guillaume Le Vaillant
8948bc7e44
gnu: evolution: Fix building with cmake > 3.20.
* gnu/packages/patches/evolution-printableoptions.patch: New file.
* gnu/packages/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gnome.scm (evolution)[source]: Use it.
2021-08-30 13:27:10 +02:00
Guillaume Le Vaillant
a68c45459d
gnu: evolution-data-server: Fix building with cmake > 3.20.
* gnu/packages/patches/evolution-data-server-printableoptions.patch: New file.
* gnu/packages/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gnome.scm (evolution-data-server)[source]: Use it.
2021-08-30 11:48:20 +02:00
Guillaume Le Vaillant
d011429b42
gnu: python-chai: Remove Python2 code.
* gnu/packages/patches/python-chai-drop-python2.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/python-xyz.scm (python-chai)[source]: Use it.
2021-08-28 23:33:08 +02:00
Leo Famulari
4c9d8ff142
gnu: QtWebKit: Fix building with Bison 3.7.
* gnu/packages/patches/qtwebkit-fix-building-with-bison-3.7.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/qt.scm (qtwebkit)[source]: Use it.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2021-08-28 18:08:30 +02:00
Leo Famulari
e3b037392a
gnu: QtWebKit: Fix building with glib 2.68.
* gnu/packages/patches/qtwebkit-fix-building-with-glib-2.68.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/qt.scm (qtwebkit)[source]: Use it.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2021-08-28 18:08:30 +02:00
Leo Famulari
fc137ffe09
gnu: QtWebKit: Fix building with ICU 68.
* gnu/packages/patches/qtwebkit-fix-building-with-icu-68.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/qt.scm (qtwebkit)[source]: Use it

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2021-08-28 18:08:30 +02:00
Leo Famulari
f5fda6eeab
gnu: QtWebKit: Fix building with Python 3.9.
* gnu/packages/patches/qtwebkit-fix-building-with-python-3.9.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/qt.scm (qtwebkit)[source]: Use it.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2021-08-28 18:08:30 +02:00
Mathieu Othacehe
004cab1bf6
gnu: glade3: Update to 3.38.2.
* gnu/packages/patches/glade-gls-set-script-name.patch: New patch.
* gnu/packages/patches/glade-test-widget-null-icon.patch: New patch.
* gnu/local.mk (DIST_PATCH_DATA): Add them.
* gnu/packages/gnome.scm (glade3): Update to 3.38.2.
[source]: Apply the patches.
[arguments]: Add new skip-gtk-update-icon-cache and fix-tests phases.
Adapt the fix-docbook phase to the meson build system.
[native-inputs]: Add glib, python-pyobject, gobject-introspection and
gjs. Remove python 2.
2021-08-19 16:01:27 +02:00
Mathieu Othacehe
100520bab3
gnu: gtk-doc: Update to 1.33.2.
* gnu/packages/patches/gtk-doc-respect-xml-catalog.patch: New file.
* gnu/local.mk (DIST_PATCH_DATA): Add it.
* gnu/packages/gtk.scm (gtk-doc): Update to 1.33.2.
[source]: Add gtk-doc-respect-xml-catalog.patch patch.
[build-system]: Switch to meson.
[arguments]: Remove fix-docbook phase.
Remove configure flags that are no longer needed.
[outputs]: Remove the help output since the help-dir option no longer exists.
2021-08-19 16:01:27 +02:00
Marius Bakke
c4133c43c7
Merge branch 'master' into core-updates-frozen
Conflicts:
	gnu/packages/algebra.scm
	gnu/packages/games.scm
	gnu/packages/golang.scm
	gnu/packages/kerberos.scm
	gnu/packages/mail.scm
	gnu/packages/python.scm
	gnu/packages/ruby.scm
	gnu/packages/scheme.scm
	gnu/packages/tex.scm
	gnu/packages/tls.scm
	gnu/packages/version-control.scm
2021-08-12 00:30:27 +02:00
Marius Bakke
443e7f6338
gnu: rapidjson: Adjust for GCC 10.
* gnu/packages/patches/rapidjson-gcc-compat.patch: Add additional patch.
2021-08-11 23:19:02 +02:00
Efraim Flashner
db8e8eb171
gnu: python-testtools: Update to 2.5.0.
* gnu/packages/check.scm (python-testtools): Update to 2.5.0.
[propagated-inputs]: Remove python-mimeparse, python-pbr, python-six,
python-traceback2, python-unittest2.
(python-testtools-bootstrap)[source]: Remove patch.
* gnu/packages/patches/python-testtools.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2021-08-11 16:16:51 +03:00
Efraim Flashner
02fbd89f2b
gnu: python-fixtures: Fix building.
* gnu/packages/check.scm (python-fixtures-bootstrap)[source]: Add patch.
* gnu/packages/patches/python-fixtures-remove-monkeypatch-test.patch:
New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2021-08-11 16:13:56 +03:00
Efraim Flashner
23b9dadc1d
gnu: python-docopt: Fix test suite for pytest-6.
* gnu/packages/python-xyz.scm (python-docopt)[source]: Add patch.
* gnu/packages/patches/python-docopt-pytest6-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2021-08-09 10:00:38 +03:00
Leo Famulari
f4f4037fcd
gnu: vigra: Update to 1.11.1-0.9b514fa.
* gnu/packages/image.scm (vigra): Update to 1.11.1-0.9b514fa.
[source]: Use git-fetch. Remove obsolete patch.
* gnu/packages/patches/vigra-python-compat.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2021-07-27 12:34:57 -04:00
Efraim Flashner
086183598e
gnu: gnupg-1: Fix build with gcc-10.
* gnu/packages/gnupg.scm (gnupg-1)[source]: Add patch.
* gnu/packages/patches/gnupg-1-build-with-gcc10.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2021-08-08 13:51:11 +03:00
Ludovic Courtès
058b339d31
gnu: ocaml@4.09: Fix link failure.
* gnu/packages/patches/ocaml-4.09-multiple-definitions.patch: New file.
* gnu/packages/ocaml.scm (ocaml-4.09)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
2021-08-05 15:46:46 +02:00
Ludovic Courtès
1d580f47a9
gnu: ocaml@4.07: Fix link failure.
The link failure shows up when using ld from GNU Binutils 2.37, and not
with 2.34.

* gnu/packages/patches/ocaml-multiple-definitions.patch: New file.
* gnu/packages/ocaml.scm (ocaml-4.07-boot)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
2021-08-05 15:46:46 +02:00
Ludovic Courtès
1685128e6e
gnu: mesa-opencl, mesa-opencl-icd: Build all the LLVM targets again.
Reported by John Kehayias <john.kehayias@protonmail.com>
in <https://issues.guix.gnu.org/49794>.

* gnu/packages/patches/mesa-opencl-all-targets.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gl.scm (mesa-opencl)[source]: Use it.
2021-08-03 18:18:45 +02:00
Marius Bakke
d2e102d4e4
Merge branch 'master' into core-updates-frozen 2021-08-01 23:23:32 +02:00
Ludovic Courtès
0a1a1ad213
gnu: glib-networking: Skip failing test.
* gnu/packages/patches/glib-networking-gnutls-binding.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gnome.scm (glib-networking)[source]: Use it.
2021-07-31 23:42:21 +02:00
Ludovic Courtès
69dde4e354
gnu: gnutls: Patch the Guile bindings for EINTR/EAGAIN handling.
* gnu/packages/patches/gnutls-guile-eintr-eagain.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/tls.scm (gnutls)[source]: Use it.
2021-07-31 15:44:58 +02:00
John Kehayias
2c0013916e
gnu: mesa: Update to 21.1.6.
* gnu/packages/gl.scm (mesa): Update to 21.1.6.
* gnu/packages/patches/mesa-skip-tests.patch: Remove cache_test.c as it is no
longer needed (test passes).

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-07-31 12:08:32 +02:00
Marius Bakke
b029be2ee0
Merge branch 'master' into core-updates-frozen
Conflicts:
	gnu/packages/bioinformatics.scm
	gnu/packages/cmake.scm
	gnu/packages/curl.scm
	gnu/packages/emacs-xyz.scm
	gnu/packages/gpodder.scm
	gnu/packages/music.scm
	gnu/packages/patches/glibc-bootstrap-system.patch
	gnu/packages/python-xyz.scm
	gnu/packages/shells.scm
	gnu/packages/statistics.scm
2021-07-29 22:34:57 +02:00
Efraim Flashner
7975a64b6d
gnu: julia-tracker: Patch for julia-1.6.
* gnu/packages/julia-xyz.scm (julia-tracker)[source]: Add patch.
* gnu/packages/patches/julia-tracker-16-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2021-07-29 14:43:27 +03:00
Franz Josef
7d93b21ab1
gnu: glibc-for-bootstrap: Update patch.
There was/is something funny going on with the bootstrap glibc. The
symbol for posix_spawnp points to getopt_r. Which in turn leads to a
lot of crashed in tests later on. I extended the glibc-bootstrap patch
to work around this bug.

* gnu/packages/patches/glibc-bootstrap-system.patch: Adjust patch to
work correctly with new architectures.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-07-28 16:05:31 +03:00
Philip McGrath
db2c7e70ad
gnu: racket-minimal: Bootstrap from C.
This commit bootstraps the Racket compiler and runtime system from source,
including Racket CS as well as both variants of Racket BC. (One remaining
limitation is discussed in comments added to gnu/packages/racket.scm.)

In the process, it moves to building minimal Racket from the Git repository,
rather than the packaged source tarballs. The Git repository is slightly
better as the ``corresponding source'':

 1. A few packages especially closely tied to the Racket core implementation
    (like "compiler-lib", "base", and "racket-doc") are developed in the
    same Git repository. Having them use the same Guix origin, too, will
    help to keep them in sync.

 2. The top-level Makefile in the Git repository is an important
    ``script[] used to control compilation and installation.''
    In particular, it cooperates with the "distro-build" package to
    create the source tarballs and installers for a Racket distribution.
    (Racket supports a notion of custom distributions.)

 3. It is ``the preferred form ... for making modifications'' to the core
    Racket implementation.

Racket releases are tagged in the Git repository (e.g. "v8.1"). At the
beginning of each release cycle, a branch is created to stabilizer a version
for extra testing. Active development happens on the "master" branch.

* gnu/packages/racket-minimal-sh-via-rktio.patch: Adjust for extra directory
layer.
* gnu/local/racket.scm (cfg-flag:sh-for-rktio, cfg-flag:enable-lt,
cfg-flag:enable-racket, unpack-nanopass+stex,
%main-repo-main-distribution-pkgs): New private variables.
* gnu/local/racket.scm (racket-minimal)[source]: Use Git.
[source](snippet): Unbundle nanopass, stex, and libffi.
[native-inputs]: Use racket-bootstrap-chez-bootfiles, plus its
dependencies (for Chez, plus a Racket for bootstrap pig).
[arguments]: Revise extensively.
* gnu/local/racket.scm (racket-minimal-bc-3m, racket-minimal-bc-cgc): New
packages, hidden at least for now.
(racket-bootstrap-chez-bootfiles): Another new package, but this one is
especially likely to stay hidden.
* gnu/local/racket.scm (racket)[origin](snippet): Unbundle packages
developed in the main Git repository, but leave their links.rktd and
pkgs.rktd entries in place.
[native-inputs]: Add the main Racket Git repository.
[arguments](#:phases): Adjust 'unpack-packages to also unpack package
sources from the main Racket Git repository.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-07-31 01:03:25 +02:00
Philip McGrath
65bad4d036
gnu: racket: Unbundle racket-minimal.
This change takes advantage of improved support for layered
and tethered installations in Racket 8.2.

* gnu/packages/racket.scm (extend-layer): New private variable.
This is a script for configuring a new config-tethered layer
chaining to an existing Racket installation.
* gnu/packages/racket.scm (racket)[source](snippet): Unbundle
`racket-minimal`.
[inputs]: Remove inputs that properly belong to `racket-minimal`.
[native-inputs]: Add `racket-minimal` and `extend-layer`.
[arguments]: Stop inheriting from `racket-minimal`. Add phase
'unpack-packages to move the sources and links file into place.
Replace 'configure phase using `extend-layer`.
Replace 'build phase using `raco setup`.
Delete 'install phase.
* gnu/packages/patches/racket-sh-via-rktio.patch: Rename to ...
* gnu/packages/patches/racket-minimal-sh-via-rktio.patch: ... this
file to placate `guix lint`.
* gnu/local.mk (dist_patch_DATA): Update accordingly.
* gnu/packages/racket.scm (racket-minimal)[source]: Likewise.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-07-31 01:03:25 +02:00
Ludovic Courtès
630c39d8df
gnu: onnx: Change source to 'git-fetch'.
* gnu/packages/machine-learning.scm (onnx)[source]: Change to
'git-fetch'.  Add "onnx-skip-model-downloads.patch".
[arguments]: Add 'make-test-directory-writable' phase.
* gnu/packages/patches/onnx-skip-model-downloads.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2021-07-31 01:03:24 +02:00
Ludovic Courtès
fa2d94b5e3
gnu: python-onnx: Rename to "onnx".
* gnu/packages/machine-learning.scm (python-onnx): Rename to...
(onnx): ... this, and change 'name' field accordingly.
(python-onnx): New variable.
* gnu/packages/patches/python-onnx-shared-libraries.patch: Rename to...
* gnu/packages/patches/onnx-shared-libraries.patch: ... this.
* gnu/packages/patches/python-onnx-use-system-googletest.patch: Rename
to...
* gnu/packages/patches/onnx-use-system-googletest.patch: ... this.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2021-07-31 01:03:24 +02:00
Ludovic Courtès
2b55f914c3
gnu: python-onnx: Install libonnx.so and libonnx_proto.so.
* gnu/packages/patches/python-onnx-shared-libraries.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/machine-learning.scm (python-onnx)[source]: Use it.
[arguments]: New field.
2021-07-31 01:03:23 +02:00
Ludovic Courtès
3ac3ca367a
gnu: python-onnx: Move comment to the patch header.
* gnu/packages/machine-learning.scm (python-onnx): Move patch comment to...
* gnu/packages/patches/python-onnx-use-system-googletest.patch: ... here.
2021-07-31 01:03:23 +02:00
Ludovic Courtès
b402a3ec86
gnu: Add XNNPACK.
* gnu/packages/machine-learning.scm (xnnpack): New variable.
* gnu/packages/patches/xnnpack-system-libraries.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2021-07-29 21:54:55 +02:00
Ludovic Courtès
1daa662722
gnu: Add FP16.
* gnu/packages/patches/fp16-system-libraries.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/maths.scm (fp16): New variable.
2021-07-29 21:54:55 +02:00
Ludovic Courtès
4c5ad82780
gnu: Add cpuinfo.
* gnu/packages/parallel.scm (cpuinfo): New variable.
* gnu/packages/patches/cpuinfo-system-libraries.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2021-07-29 21:54:55 +02:00
Ludovic Courtès
18d04fef0f
gnu: Add pthreadpool.
* gnu/packages/parallel.scm (pthreadpool): New variable.
* gnu/packages/patches/pthreadpool-system-libraries.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2021-07-29 21:54:54 +02:00
Ludovic Courtès
a9bc8a25eb
gnu: Add FXDiv.
* gnu/packages/maths.scm (fxdiv): New variable.
* gnu/packages/patches/fxdiv-system-libraries.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2021-07-29 21:54:54 +02:00
Maxim Cournoyer
b1ef8b410c
gnu: python-pytest-asyncio: Enable tests and patch for Python 3.8.
* gnu/packages/patches/python-pytest-asyncio-python-3.8.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/check.scm (python-pytest-asyncio)
[source]: Fetch from git and apply above patch.
[phases]: Override the check phase, enabling tests.
2021-08-29 01:05:28 -04:00
Maxim Cournoyer
1d94000d87
gnu: python-execnet: Update to 1.9.0 and enable tests.
* gnu/packages/patches/python-execnet-read-only-fix.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/python-xyz.scm (python-execnet): Update to 1.9.0.
[source]: Fix indentation.
[arguments]: Enable tests, replacing the default check phase.
2021-08-29 01:05:27 -04:00
Maxime Devos
bb61100ee3
gnu: minetest: Search for mods in MINETEST_MOD_PATH.
* gnu/packages/patches/minetest-add-MINETEST_MOD_PATH.patch: New file.
* gnu/packages/games.scm
  (minetest)[source]{patches}: Add it.
  (minetest)[native-search-paths]: Add "MINETEST_MOD_PATH".
* gnu/local.mk (dist_patch_DATA): Add the patch.

Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
2021-08-20 12:41:30 +02:00
Arun Isaac
d31301dfe0
gnu: Add python-pyan3.
* gnu/packages/python-xyz.scm (python-pyan3): New variable.
* gnu/packages/patches/python-pyan3-fix-absolute-path-bug.patch,
gnu/packages/patches/python-pyan3-fix-positional-arguments.patch: New files.
* gnu/local.mk: Register them.
2021-08-18 19:27:58 +05:30
Giovanni Biscuolo
05effbbfc2
gnu: adb: Make compatible with OpenSSL 1.1.
OpenSSL version 1.1 brought some API changes which broke the build here, fix
that by accessing rsa->n (and e) directly, using RSA_get0_key instead.

* gnu/packages/patches/adb-libssl_11-compatibility.patch: New file
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/android.scm (android-platform-system-core)[origin]: Use it.
(adb)[inputs]: Replace openssl-1.0 with openssl.
2021-07-27 12:34:57 -04:00
Ludovic Courtès
168d107abf
gnu: rocm-opencl-runtime: Shorten patch file name.
This appeases 'guix lint -c patch-file-names'.

* gnu/packages/patches/rocm-opencl-runtime-3.10.0-add-rocclr-include-directories.patch:
Rename to...
* gnu/packages/patches/rocm-opencl-runtime-3.10.0-includes.patch: ... this.
* gnu/packages/rocm.scm (rocm-opencl-runtime)[source]: Adjust accordingly.
* gnu/local.mk (dist_patch_DATA): Likewise.
2021-08-11 16:35:28 +02:00
Lars-Dominik Braun
c0f10a5dd4
gnu: Add rocm-opencl-runtime.
* gnu/packages/rocm.scm (rocm-opencl-runtime): New variable.
* gnu/packages/patches/rocm-opencl-runtime-3.10.0-add-rocclr-include-directories.patch,
gnu/packages/patches/rocm-opencl-runtime-4.3-noclinfo.patch,
gnu/packages/patches/rocm-opencl-runtime-4.3-nocltrace.patch,
gnu/packages/patches/rocm-opencl-runtime-4.3-noopencl.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
2021-08-08 16:47:56 +02:00
Lars-Dominik Braun
9c083e7063
gnu: Add rocm-comgr.
* gnu/packages/rocm.scm (rocm-comgr): New variable.
* gnu/packages/patches/rocm-comgr-3.1.0-dependencies.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2021-08-08 16:47:55 +02:00
Lars-Dominik Braun
c5ee2cf72a
gnu: Add llvm-for-rocm.
* gnu/packages/rocm.scm (llvm-for-rocm): New variable.
* gnu/packages/patches/llvm-roc-3.0.0-add_libraries.patch,
gnu/packages/patches/llvm-roc-4.0.0-remove-isystem-usr-include.patch,
gnu/packages/patches/llvm-roc-4.2.0-add_Object.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
2021-08-08 16:47:55 +02:00
Sarah Morgensen
1273548f4f
gnu: restic: Patch tests for go-1.16.
* gnu/packages/patches/restic-0.9.6-fix-tests-for-go1.15.patch: New
file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/backup.scm (restic): Use it.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2021-08-05 22:56:49 -04:00
Maxim Cournoyer
49432f6534
gnu: pypy3: Update to 7.3.5.
The patch disabling tests is removed because it only fixes 2 out of 43 test
failures.

* gnu/packages/patches/pypy3-7.3.1-fix-tests.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): De-register it.
* gnu/packages/python.scm (pypy3): Update to 7.3.5.
[patches]: Remove patch.
2021-08-05 10:29:58 -04:00
Pierre Langlois
e914fc5913
gnu: Rename u-boot-sifive-fu540 to sifive-unleashed.
* gnu/packages/bootloaders.scm (u-boot-sifive-fu540): Rename to ...
(u-boot-sifive-unleashed): ... this.  Change board name from sifive_fu540 to
sifive_unleashed.
* gnu/packages/patches/u-boot-riscv64-fix-extlinux.patch: Rename sifive_fu540
to sifive_unleashed.
2021-08-05 13:42:50 +01:00
Ludovic Courtès
dd55ad7ff8
gnu: Add python-pytorch.
* gnu/packages/machine-learning.scm (python-pytorch): New variable.
* gnu/packages/patches/python-pytorch-runpath.patch,
gnu/packages/patches/python-pytorch-system-libraries.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
2021-08-04 17:22:19 +02:00
Dmitry Polyakov
2e0ddc74f6
gnu: Add instead.
* gnu/packages/game-development.scm (instead): New variable.
* gnu/packages/patches/instead-use-games-path.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it here.
2021-08-04 15:44:09 +02:00
Efraim Flashner
f71b381d1f
gnu: samba: Update to 4.13.10.
* gnu/packages/samba.scm (samba): Update to 4.13.10.
[source]: Remove patch.
* gnu/packages/patches/samba-fix-fcntl-hint-detection.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2021-08-04 16:34:32 +03:00
Ludovic Courtès
6da2b35b60
gnu: Add onnx-optimizer.
* gnu/packages/machine-learning.scm (onnx-optimizer): New variable.
* gnu/packages/patches/onnx-optimizer-system-library.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2021-08-02 18:11:33 +02:00
Pierre Langlois
eb46c6c5c8
gnu: u-boot: Update to 2021.07.
* gnu/packages/patches/u-boot-sifive-prevent-reloc-initrd-fdt.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/bootloaders.scm (%u-boot-sifive-prevent-relocating-initrd-fdt):
New variable.
(u-boot): Update to 2021.07.
[native-inputs]: Add python-pycryptodomex.
(u-boot-2021.07): Delete variable.
(u-boot-tools)[arguments]: Adapt 'patch phase, disable failing test_spl test.
(u-boot-sifive-unmatched): Use default u-boot package.
(u-boot-pinebook-pro-rk3328): Use default u-boot package.
2021-08-02 13:23:32 +01:00
Marius Bakke
f12709ec5f
binutils: Fix Loongson workaround.
This is a follow-up to 2fa26446a1 which
inadvertently inverted the value of this variable.

* gnu/packages/patches/binutils-loongson-workaround.patch: Flip variable value
as it was before 2fa26446a1.
2021-07-27 15:13:11 +02:00
Wiktor Żelazny
769326cf18
gnu: Add marble-qt.
* gnu/packages/patches/marble-qt-add-qt-headers.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/geo.scm (marble-qt): New variable.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2021-07-25 13:51:45 +02:00
Tobias Geerinckx-Rice
c7b51b799d
gnu: esmtp: Fix build with libesmtp >= 1.1.0.
* gnu/packages/mail.scm (esmtp)[source]: Add patch.
* gnu/packages/patches/esmtp-add-lesmtp.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2021-07-24 23:59:07 +02:00
Ludovic Courtès
1feca4be52
gnu: glibc: Remove versions 2.27 and 2.28.
* gnu/packages/base.scm (glibc-2.28, glibc-2.27): Remove.
* gnu/packages/patches/glibc-2.27-git-fixes.patch,
gnu/packages/patches/glibc-2.27-supported-locales.patch,
gnu/packages/patches/glibc-2.28-git-fixes.patch,
gnu/packages/patches/glibc-2.28-supported-locales.patch: Remove.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2021-07-24 16:23:24 +02:00
Marius Bakke
abe5ffbbfe
gnu: libxml2: Update to 2.9.12.
* gnu/packages/patches/libxml2-parent-pointers.patch,
gnu/packages/patches/libxml2-terminating-newline.patch,
gnu/packages/patches/libxml2-xpath-recursion-limit.patch: New files.
* gnu/packages/patches/python-libxml2-python39-compat.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/xml.scm (libxml2): Update to 2.9.12.
(python-lxml)[source](modules, snippet): New fields.
2021-07-23 17:26:46 +02:00
Marius Bakke
2fa26446a1
gnu: binutils: Update to 2.37.
* gnu/packages/patches/binutils-loongson-workaround.patch: Adjust for upstream
changes.
* gnu/packages/patches/binutils-libiberty-endianness-bug.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/base.scm (binutils): Update to 2.37.
[source](patches): Remove obsolete patch.
2021-07-23 17:26:45 +02:00
Marius Bakke
2a592d43ef
gnu: Perl: Update cross-compilation code.
* gnu/packages/perl.scm (perl)[native-inputs]: Update "perl-cross" to 1.3.6.
[arguments]: Remove obsolete patch.
* gnu/packages/patches/perl-cross.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2021-07-23 17:26:44 +02:00
Maxime Devos
3f7efaa54a
gnu: binutils: Update binutils patch for mingw.
This allows "./pre-inst-env guix build hello --target=x86_64-w64-mingw32"
to succeed.  The binary can be run successfully under wine.

* gnu/packages/patches/binutils-mingw-w64-timestamp.patch:
  Update to the current version in Debian.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2021-07-23 14:36:00 +02:00
Chris Marusich
93a5e89008
gnu: glibc-2.31: Restore patches.
Commit 87961fc965 inadvertently modified the
patch set for glibc-2.31.  This change restores the original patch set.

Fixes: <https://bugs.gnu.org/49516>.

* gnu/packages/base.scm (glibc-2.31) [source]: Use the same patches as glibc,
but replace glibc-hurd-clock_gettime_monotonic.patch with
glibc-2.31-hurd-clock_gettime_monotonic.patch, and add
glibc-hurd-signal-sa-siginfo.patch.
* gnu/packages/patches/glibc-2.31-hurd-clock_gettime_monotonic.patch: Add it.
* gnu/packages/patches/glibc-hurd-signal-sa-siginfo.patch: Add it.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2021-07-21 16:02:42 -07:00
Giacomo Leidi
1f07d4436c
gnu: extempore: Update to 0.8.9.
* gnu/packages/music.scm (extempore): Update to 0.8.6.
[source]: Portaudio is no more in-tree.
[arguments]: Load external libraries through patched CMakeLists.txt.
[phases]: Symlink assets.
* gnu/packages/patches/extempore-unbundle-external-dependencies.patch:
Update accordingly.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2021-07-21 23:00:51 +02:00
Nathan Benedetto Proença
c3e33474b9
gnu: biber: Update to 2.16.
* gnu/packages/tex.scm (biber): Update to 2.16.
[source]: Remove 'patches'.
[inputs]: Add 'perl-io-string', 'perl-parse-recdescent', and
'perl-unicode-collate' (upstream appears to have fixed the issue
initially mentioned as a comment: recent issue was closed after
telling user to use perl-unicode-collate 1.29, which is the one
available; see <https://github.com/plk/biber/issues/378>.)
* gnu/packages/patches/biber-fix-encoding-write.patch,
gnu/packages/patches/biber-sortinithash.patch: Remove.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2021-07-21 15:59:29 +02:00
Guillaume Le Vaillant
db5962c680
gnu: ghostscript: Improve reproducibility of PDF document generation
* gnu/packages/patches/ghostscript-no-header-creationdate.patch: Disable
  writing "xmp:ModifyDate" and "xmp:CreateDate" if GS_GENERATE_UUIDS is set to
  "0" or "no".
2021-07-19 12:43:15 +02:00
Ludovic Courtès
0e47fcced4
Merge branch 'master' into core-updates 2021-07-18 19:50:01 +02:00
Justin Veilleux
9cb35c0216
gnu: Add transmission-remote-gtk.
* gnu/packages/bittorrent.scm (transmission-remote-gtk): New variable.
* gnu/packages/patches/transmission-remote-gtk-fix-appstream.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Co-authored-by: Leo Famulari <leo@famulari.name>
2021-07-16 23:53:46 -04:00
Z572
4094d12df1
gnu: Add ark.
* gnu/packages/kde-utils.scm (ark): New variable.
* gnu/packages/patches/ark-skip-xar-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.

Modified-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2021-07-16 00:06:05 -04:00
Maxim Cournoyer
c881516d48
gnu: proot: Update to 5.2.0-alpha.
This allows proot to be built for aarch64-linux and armhf-linux.

* gnu/packages/patches/proot-test-fhs.patch: Delete patch.
* gnu/local.mk (dist_patch_DATA): Un-register it.
* gnu/packages/linux.scm: Update to 5.2.0-alpha.
[patches]: Remove field.
[supported-system]: New field.
[tests?]: Disable for ARM-based systems.
[phases]{fix-fhs-assumptions-in-tests, set-shell-file-name}: Combine into...
{patch-sources}: ... this new phase.
{build-manpage}: New phase.
{check}: Add seccomp issue URL in comment.
[native-inputs]: Add coreutils issue URL in comment.  Add pkg-config and
python-docutils.
[inputs]: Add libarchive.
2021-07-12 11:37:40 -04:00
Sarah Morgensen
6f12880a76
gnu: fontconfig: Use (locally) deterministic caching
Make fontconfig use directory contents rather than modification time to
determine cache validity (by pretending that mtime is broken).

* gnu/packages/patches/fontconfig-cache-ignore-mtime.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/fontutils.scm (fontconfig)[source]: Use it.
[arguments]: Unset SOURCE_DATE_EPOCH for tests.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-07-11 18:17:31 +02:00
Ludovic Courtès
c823b95825
gnu: coreutils: Patch broken Gnulib tests.
Fixes <https://bugs.gnu.org/49459>.

* gnu/packages/patches/coreutils-gnulib-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/base.scm (coreutils)[source]: Use it.
2021-07-10 01:31:42 +02:00
Zhu Zihao
d0ccdd707d
gnu: Add emacs-telega-server.
* gnu/packages/emacs-xyz.scm (emacs-telega-server): New variable.
* gnu/packages/patches/emacs-telega-path-placeholder.patch: New file.
* gnu/package/patches/emacs-telega-patch-server-functions.patch: Remove stale patch.
* gnu/local.mk (dist_patch_DATA): Update accordingly.

Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
2021-07-09 15:08:04 +02:00
Ludovic Courtès
9bfc4a8187
gnu: python-seaborn: Update to 0.11.1.
* gnu/packages/patches/python-seaborn-kde-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/python-xyz.scm (python-seaborn): Use it, and update to
0.11.1.
2021-07-09 11:58:50 +02:00
Ludovic Courtès
145a5a5797
gnu: glibc: Fix cross-compilation to powerpc64le-linux-gnu.
Fixes <https://bugs.gnu.org/49417>.
Reported by Maxime Devos <maximedevos@telenet.be>.

* gnu/packages/patches/glibc-cross-objcopy.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/base.scm (glibc)[source]: Use it.
2021-07-08 00:28:56 +02:00
Leo Famulari
99aecc0988
gnu: VTK 8: Re-fix a build failure with recent versions of freetype.
* gnu/packages/patches/vtk-8-fix-freetypetools-build-failure.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/image-processing.scm (vtk-8): Dis-inherit from VTK. Use the
package definition that predated the update to VTK 9, taken from commit
f4dc8ac6df.
2021-07-07 16:50:21 -04:00
Raghav Gururajan
f480f27c9c
gnu: ytfzf: Fix loading of thumbnails.
* gnu/packages/patches/ytfzf-programs.patch: Modify.
2021-07-07 01:53:39 -04:00
Raghav Gururajan
aa6e6fb2e9
gnu: Add ytfzf.
* gnu/packages/image-viewers.scm (ytfzf): New variable.

Co-authored-by: jgart <jgart@dismail.de>
2021-07-06 01:27:29 -04:00
Ludovic Courtès
949ed7aae1
gnu: glibc: Fix cross-compilation to aarch64-linux-gnu.
Fixes <https://bugs.gnu.org/49113>.
Reported by Maxime Devos <maximedevos@telenet.be>.

Previously, the cross-compiled libc.so linker script would read:

  OUTPUT_FORMAT(elf64-little)

instead of:

  OUTPUT_FORMAT(elf64-littleaarch64)

This is because glibc 2.33 runs "objdump -f" instead of
"aarch64-linux-gnu-objdump -f" to determine the output format.

* gnu/packages/patches/glibc-cross-objdump.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/base.scm (glibc)[source]: Use it.
2021-07-04 22:10:06 +02:00
Tobias Geerinckx-Rice
243d74579d
gnu: libgrss: Fix CVE-2016-20011.
* gnu/packages/gnome.scm (libgrss): Add patch.
* gnu/packages/patches/libgrss-CVE-2016-2001.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2021-07-04 03:06:03 +02:00
Efraim Flashner
b7d70aeb0b
gnu: tor: Update to 0.4.6.6.
* gnu/packages/tor.scm (tor): Update to 0.4.6.6.
[source]: Remove patch.
* gnu/packages/patches/tor-fix-build-with-gcc-7.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2021-06-30 20:02:32 +03:00
Raghav Gururajan
55b1466303
Revert "gnu: Add ytfzf."
This reverts commit 3fdb2d6792,
as it was accidentally pushed.
2021-06-28 17:56:33 -04:00
LibreMiami
3fdb2d6792
gnu: Add ytfzf.
* gnu/packages/image-viewers.scm (ytfzf): New variable.

Co-authored-by: Raghav Gururajan <rg@raghavgururajan.name>
Co-authored-by: jgart <jgart@dismail.de>
2021-06-28 17:43:24 -04:00
Sarah Morgensen
e3e4cbb93f
gnu: Add go-1.16.
Add go@1.16 as a non-default go. Changes from 1.14: Use now-supported GO_LDSO
configuration option for setting the interpreter. Bootstrap with gccgo on
platforms which do not support go-1.4. Fix and re-enable cmd/go script tests.
Fix typo in cgoldflags patch. Break out tests into "check" phase. Remove
references to perl to reduce closure size by ~10%. Set GOCACHE so go doesn't
attempt to access $HOME.

* gnu/packages/patches/go-fix-script-tests.patch: New file.
* local.mk (dist_patch_DATA): Register it.
* gnu/packages/golang.scm (go-1.16): New variable. Use the patch.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-06-28 22:19:50 +03:00
Timotej Lazar
076bbc440f
gnu: Add oneko.
* gnu/packages/toys.scm (oneko): New variable.

Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
2021-06-28 20:46:14 +02:00
Tobias Geerinckx-Rice
35188a8257
gnu: upower: Build from Git sources.
* gnu/packages/gnome.scm (upower)[source]: Use GIT-FETCH and
GIT-FILE-NAME.  Adjust snippet.
[native-inputs]: Add autoconf, automake, gtk-doc, libtool, and which.
* gnu/packages/patches/upower-builddir.patch: Adjust to Makefile.am.
2021-06-28 18:04:15 +02:00
Tobias Geerinckx-Rice
bf9dc75682
gnu: connman: Update to 1.40.
* gnu/packages/connman.scm (connman): Update to 1.40.
[source]: Remove upstreamed patch.
[inputs]: Add lz4, rather than propagate it from openconnect.
* gnu/packages/patches/connman-CVE-2021-33833.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2021-06-25 19:02:35 +02:00
Tobias Geerinckx-Rice
a3d9af5eb1
gnu: Remove dead cups-CVE-2020-10001.patch.
* gnu/packages/patches/cups-CVE-2020-10001.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2021-06-23 18:53:11 +02:00
Tobias Geerinckx-Rice
9dea3f101f
Merge branch 'master' into core-updates
Conflicts:
	gnu/packages/cups.scm
	gnu/packages/python-web.scm
	gnu/packages/web.scm
	guix/build/maven/pom.scm
2021-06-23 18:45:21 +02:00
Tobias Geerinckx-Rice
620669fd17
gnu: cups: Add replacement to fix CVE-2020-10001.
* gnu/packages/patches/cups-CVE-2020-10001.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/cups.scm (cups-minimal/fixed): New variable.
(cups-minimal)[replacement]: Assign it to new field.
2021-06-23 18:41:23 +02:00
Felix Gruber
b6fc274637
gnu: widelands: Update to 1.0.
* gnu/packages/games.scm (widelands): Update to 1.0.
[source]: Download from github as there is no tarball for v1.0 on their
website.
[inputs]: Add curl.
* gnu/packages/patches/widelands-system-wide_minizip.patch: Adjust for
1.0. CmakeLists.txt now already defines CMAKE_MODULE_PATH, so I've moved
FindMinizip.cmake to this path.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-06-22 10:27:21 +02:00
Jack Hill
30a04c00be
gnu: Add tlf.
* gnu/packages/patches/tlf-support-hamlib-4.2+.patch: New file.
* gnu/local.mk: Add it.
* gnu/packages/radio.scm (tlf): New variable.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2021-06-21 10:16:04 +02:00
Arun Isaac
0a90bea34d
gnu: linkchecker: Update to 10.0.1.
* gnu/packages/web.scm (linkchecker): Update to 10.0.1.
[source]: Remove patches.
[inputs]: Add python-beautifulsoup4. Replace python2-dnspython-1.16,
python2-pyxdg and python2-requests with python-dnspython, python-pyxdg and
python-requests respectively.
[native-inputs]: Replace python2-pytest, python2-miniboa and
python2-parameterized with python-pytest, python-miniboa and
python-parameterized respectively.
[arguments]: Use python 3. Replace check phase instead of deleting the
standard phase and adding a custom one. Use add-installed-pythonpath instead
of setting PYTHONPATH directly. Support disabling of tests with tests?.
[home-page]: Update URI.
* gnu/packages/patches/linkchecker-tests-require-network.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Unregister it.
2021-06-20 00:24:11 +05:30
Marius Bakke
6f9a80b331
Merge branch 'master' into core-updates
Note: this merge actually changes the 'curl' and 'python-attrs' derivations,
as part of solving caf4a7a277 and
12964df69a respectively.

4604d43c0e (gnu: gnutls@3.6.16: Fix cross-compilation.) was ignored because it
cannot currently be tested.

 Conflicts:
	gnu/local.mk
	gnu/packages/aidc.scm
	gnu/packages/boost.scm
	gnu/packages/curl.scm
	gnu/packages/nettle.scm
	gnu/packages/networking.scm
	gnu/packages/python-xyz.scm
	gnu/packages/tls.scm
2021-06-19 17:38:47 +02:00
Marius Bakke
dece03e2b9
gnu: Remove bsdiff traces.
This is a follow-up to 373c7b5791.

* gnu/packages/patches/bsdiff-CVE-2014-9862.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2021-06-19 17:17:02 +02:00
Marius Bakke
657aaa7be4
gnu: efivar: Adjust for GCC 10.
* gnu/packages/patches/efivar-gcc-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/linux.scm (efivar)[source](patches, modules, snippet): New
fields.
[arguments]: Use CC-FOR-TARGET while at it.
2021-06-19 17:09:51 +02:00
Marius Bakke
fbee3e134b
gnu: jfsutils: Adjust for GCC 10.
* gnu/packages/patches/jfsutils-gcc-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/file-systems.scm (jfsutils)[source](patches): Add it.
2021-06-19 17:09:51 +02:00
Marius Bakke
e4d5b509fe
gnu: isc-dhcp: Adjust for GCC 10.
* gnu/packages/patches/isc-dhcp-gcc-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/admin.scm (isc-dhcp)[source](patches): New field.
2021-06-19 17:09:51 +02:00
Marius Bakke
5b6d264f12
gnu: ath9k-htc-firmware: Adjust for GCC 10.
* gnu/packages/patches/ath9k-htc-firmware-gcc-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/firmware.scm (ath9k-htc-firmware)[source](patches): Add it.
2021-06-19 17:09:51 +02:00
Marius Bakke
2b2ecbace4
gnu: QEMU: Adjust for Sphinx 4.0.
* gnu/packages/patches/qemu-sphinx-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/virtualization.scm (qemu)[source](patches): Add it.
2021-06-19 17:09:51 +02:00
Ludovic Courtès
caf4a7a277
gnu: curl@7.77.0: Provide a correct TLS priority string.
Fixes <https://bugs.gnu.org/49035>.

* gnu/packages/patches/curl-7.77-tls-priority-string.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/curl.scm (curl-7.77.0)[source]: Use it.
2021-06-18 17:40:10 +02:00
Boris A. Dekshteyn
624a6b60b5
gnu: inkscape: Update to version 1.1.
* gnu/packages/patches/inkscape-1.1-fix-build-witch-gcc7.5.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/inkscape.scm (inkscape-1.0) Rename to inkscape-1.1.
* gnu/packages/inkscape.scm (inkscape-1.1) Update to version 1.1.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-06-18 13:12:17 +02:00
Brice Waegeneire
db87a223fe
gnu: brightnessctl: Add elogind support.
* gnu/packages/patches/brightnessctl-elogind-support.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/linux.scm (brightnessctl)[source]: Apply it.
[make-flags]: Enable logind support.
[native-inputs]: Add pkg-config.
[inputs]: Add elogind.
2021-06-17 07:27:45 +02:00
Leo Famulari
e26efac68c
gnu: HexChat: Add Libera Chat to the list of networks.
* gnu/packages/patches/hexchat-add-libera-chat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/messaging.scm (hexchat)[source]: Use it.
2021-06-16 12:40:17 -04:00
Nicolas Goaziou
ae31d80d00
gnu: Add rust-ndarray-0.13.
* gnu/packages/crates-io.scm (rust-ndarray-0.13): New variable.
(rust-ndarray-0.12): Inherit from above.
* gnu/packages/patches/rust-ndarray-0.13-remove-blas-src.patch: New file.
* gnu/local.mk: Register new file.
2021-06-16 12:52:46 +02:00
Tobias Geerinckx-Rice
fe197971bb
gnu: bash-completion: Look in user directories first.
* gnu/packages/patches/bash-completion-directories.patch: Move user
directories to the head of the list.
2021-06-16 12:13:39 +02:00
Tobias Geerinckx-Rice
e7aac78ee9
gnu: tor: Update to 0.4.6.5.
* gnu/packages/tor.scm (tor): Update to 0.4.6.5.
[source]: Add a patch to fix building with GCC 7.
* gnu/packages/patches/tor-fix-build-with-gcc-7.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2021-06-14 23:21:16 +02:00
Carl Dong
83d9e2ee56
gnu: gcc-8: Make static libs reproducible
This fixes the nonreproducibility in gcc documented here:
https://reproducible-builds.org/docs/archives/#gnu-libtool

* gnu/packages/patches/gcc-8-sort-libtool-find-output.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/gcc.scm (gcc-8)[source]: Apply it.
2021-06-14 12:29:11 -04:00
Mark H Weaver
3abaca2aae
gnu: nettle-3.5: Add replacement to fix CVE-2021-3580 et al.
* gnu/packages/patches/nettle-3.5-check-_pkcs1_sec_decrypt-msg-len.patch,
gnu/packages/patches/nettle-3.5-CVE-2021-3580-pt1.patch,
gnu/packages/patches/nettle-3.5-CVE-2021-3580-pt2.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/nettle.scm (nettle)[replacement]: New field.
(nettle-3.5/fixed): New variable.
2021-06-14 03:30:03 -04:00
Leo Famulari
ee48e784b9
gnu: connman: Fix CVE-2021-33833.
* gnu/packages/patches/connman-CVE-2021-33833.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/connman.scm (connman)[source]: Use it.
2021-06-13 14:45:19 -04:00
Marius Bakke
628a6c51d4
gnu: QEMU: Fix compatibility with Meson 0.58.
* gnu/packages/patches/qemu-meson-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/virtualization.scm (qemu)[source](patches): Add it.
2021-06-13 15:34:06 +02:00
Marius Bakke
84b238c8f2
gnu: libcacard: Update to 2.8.0.
* gnu/packages/patches/libcacard-unknown-variable.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/spice.scm (libcacard): Update to 2.8.0.
[source](patches): New field.
[arguments]: Remove trailing #t.
2021-06-13 15:34:02 +02:00
Marius Bakke
c87ebc1b31
gnu: QEMU: Update to 6.0.0.
* gnu/packages/patches/qemu-build-info-manual.patch: Adjust for 6.0.
* gnu/packages/virtualization.scm (qemu): Update to 6.0.0.
[source](snippet): Remove obsolete substitution.
[arguments]: Adjust test substitutions for upstream changes.
* gnu/packages/bootloaders.scm (grub)[source](modules, snippet): New fields.
2021-06-13 15:33:57 +02:00
Marius Bakke
5d4b721b7d
gnu: graphviz: Update to 2.47.1.
* gnu/packages/graphviz.scm (graphviz): Update to 2.47.1.
[source]: Adjust for new download location.
* gnu/packages/patches/graphviz-CVE-2020-18032.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2021-06-13 01:00:46 +02:00
Marius Bakke
4796b5d6d1
gnu: GCC: Switch to GCC 10.
* gnu/packages/patches/gcc-cross-gxx-include-dir.patch: New file.
* gnu/packages/patches/gcc-10-cross-environment-variables.patch: New file.
* gnu/packages/gcc.scm (gcc): Point to GCC-10.
(gcc-objc): Point to GCC-OBJC-10.
(gcc-objc++): Point to GCC-OBJC++-10.
* gnu/packages/cross-base.scm (cross-gcc)[source](patches): Apply the new
patches.
2021-06-13 01:00:46 +02:00
Marius Bakke
1dec7fa83d
gnu: curl: Absorb replacement.
* gnu/packages/patches/curl-7.76-use-ssl-cert-env.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/curl.scm (curl): Update to 7.77.0.
[replacement]: Remove.
(source)[patches]: Adjust for new patch.
2021-06-13 01:00:46 +02:00
Tobias Geerinckx-Rice
2d115ea7ed
gnu: grub: Update to 2.06.
[source]: Remove upstreamed patches.
* gnu/packages/patches/grub-setup-root.patch: Update patch.
* gnu/packages/patches/grub-verifiers-Blocklist-fallout-cleanup.patch,
gnu/packages/patches/grub-cross-system-i686.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
2021-06-12 20:58:16 +02:00
Julien Lepiller
8ce96d8447
gnu: python: Do not install static libraries.
This is something Fedora already does since 2010, so it should be safe,
and saves a lot of space.

* gnu/packages/patches/python-2.7-no-static-lib.patch: New file.
* gnu/packages/patches/python-3-no-static-lib.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/python.scm (python-2.7, python-3): Use them.
2021-06-11 02:39:32 +02:00
Ludovic Courtès
9178566954
gnu: polkit: Add replacement for CVE-2021-3560.
* gnu/packages/patches/polkit-CVE-2021-3560.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/polkit.scm (polkit/fixed): New variable.
(polkit)[replacement]: New field.
2021-06-08 23:28:04 +02:00
Lars-Dominik Braun
dbe607925a
gnu: xpra: Update to 4.2.
Fixes <https://issues.guix.gnu.org/issue/48890>.

* gnu/packages/xorg.scm (xpra): Update to 4.2.
[source]: Switch to ".tar.gz" archive and update patch file.
[native-inputs]: Add pandoc.
[arguments]: Adjust custom 'fix-paths phase for changes in source.
* gnu/packages/patches/xpra-4.2-systemd-run.patch: Adapt to new version
and rename file.
* gnu/local.mk (dist_patch_DATA): Rename file.

Signed-off-by: Lars-Dominik Braun <lars@6xq.net>
2021-06-07 09:33:57 +02:00
Marius Bakke
8d59c262ad
Merge branch 'master' into core-updates
Conflicts:
	gnu/local.mk
	gnu/packages/algebra.scm
	gnu/packages/bioinformatics.scm
	gnu/packages/curl.scm
	gnu/packages/docbook.scm
	gnu/packages/emacs-xyz.scm
	gnu/packages/maths.scm
	gnu/packages/plotutils.scm
	gnu/packages/python-web.scm
	gnu/packages/python-xyz.scm
	gnu/packages/radio.scm
	gnu/packages/readline.scm
	gnu/packages/tls.scm
	gnu/packages/xml.scm
	gnu/packages/xorg.scm
2021-06-06 21:16:32 +02:00
Marius Bakke
79878c64b4
gnu: nss: Update to 3.66.
* gnu/packages/nss.scm (nss): Update to 3.66.  Reindent.
[arguments]: Remove #:parallel-build?.
* gnu/packages/patches/nss-getcwd-nonnull.patch: Adjust for directory change.
* gnu/packages/patches/nss-3.56-pkgconfig.patch,
gnu/packages/patches/nss-increase-test-timeout.patch: Revert to
6223566971.
* gnu/packages/certs.scm (nss-certs)[arguments]: Adjust for directory change.
2021-06-06 19:49:57 +02:00
Marius Bakke
1eee406b07
gnu: nss: Prepare for GCC 10.
* gnu/packages/patches/nss-getcwd-nonnull.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/nss.scm (nss)[source](patches): Add it.
2021-06-06 19:49:56 +02:00
Efraim Flashner
b65c02e2d3
gnu: freebayes: Update to 1.3.5.
* gnu/packages/bioinformatics.scm (freebayes): Update to 1.3.5.
[source]: Remove patch.
[arguments]: Adjust custom 'patch-source phase for changes in source.
[inputs]: Remove zlib.
* gnu/packages/patches/freebayes-devendor-deps.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2021-06-06 12:13:28 +03:00
Maxim Cournoyer
a18079288f
gnu: ppsspp: Update to 1.11.3-1.69fa207.
This fixes the build with ffmpeg 4.4.

* gnu/packages/patches/ppsspp-disable-upgrade-and-gold.patch: Rebase patch.
* gnu/packages/emulators.scm (ppsspp): Update to 1.11.3-1.69fa207.
[source]: Adjust origin snippet to unbundle the newly added zstd library.
2021-06-06 02:38:29 -04:00
Maxim Cournoyer
63858f8c8b
gnu: gnutls: Update to 3.7.2.
The 3.7 branch, while not considered the "stable" branch upstream, has been
adopted by most major GNU/Linux distributions such as Debian, Arch, openSUSE,
etc.  It has the benefit of receiving all the security fixes.

* gnu/packages/tls.scm (gnutls): Update to 3.7.2.  Remove trailing #t.
[source]: Remove the gnutls-CVE-2021-20231.patch and
gnutls-CVE-2021-20232.patch patches, now incorporated in the source.
* gnu/packages/patches/gnutls-CVE-2021-20231.patch: Delete file.
* gnu/packages/patches/gnutls-CVE-2021-20232.patch: Likewise.
* gnu/local.mk (dist_patch_DATA): De-register them.
2021-06-06 00:50:16 -04:00