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rsiddharth
a51ba89774
gnu: Add ghc-math-functions. 
* gnu/packages/haskell.scm (ghc-math-functions): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-22 15:32:14 -07:00
rsiddharth
bdd7e3950f
gnu: Add ghc-erf. 
* gnu/packages/haskell.scm (ghc-erf): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-22 15:32:14 -07:00
rsiddharth
c1274a0b79
gnu: Add ghc-vector-th-unbox. 
* gnu/packages/haskell.scm (ghc-vector-th-unbox): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-22 15:32:14 -07:00
rsiddharth
78d8b8f36a
gnu: Add ghc-errors. 
* gnu/packages/haskell.scm (ghc-errors): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-22 15:32:13 -07:00
Marius Bakke
ef7dd2e259
gnu: python-chardet: Fix PyPi download location. 
This is a followup to a54cb3ce1f.

* gnu/packages/python.scm (python-chardet)[source](uri): Use PYPI-URI.
 2017-10-22 23:32:17 +02:00
Marius Bakke
60e29339d8
gnu: glibc: Fix CVE-2017-15670, CVE-2017-15671. 
* gnu/packages/patches/glibc-CVE-2017-15670-15671.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/base.scm (glibc/linux)[replacement]: New field.
(glibc/fixed): New variable.
(glibc-2.24, glibc-2.23, glibc-2.22)[source](patches): Add
'glibc-CVE-2017-15670-15671.patch'.
 2017-10-22 23:13:09 +02:00
Ricardo Wurmus
65fc5bf07d
gnu: faust-2: Update to 2.1.0. 
* gnu/packages/audio.scm (faust-2): Update to 2.1.0.
[source]: Fetch sources via git.
[arguments]: Add phase "fix-permissions".
 2017-10-22 21:25:28 +02:00
Marius Bakke
25669275a1
gnu: irssi: Update to 1.0.5 [security fixes]. 
Fixes CVE-2017-15228, CVE-2017-15227, CVE-2017-15721, CVE-2017-15723 and
CVE-2017-15722.  See <https://irssi.org/security/irssi_sa_2017_10.txt>.

* gnu/packages/irc.scm (irssi): Update to 1.0.5.
 2017-10-22 17:24:33 +02:00
Cyril Roelandt
a54cb3ce1f
gnu: python-chardet: Update to 3.0.4. 
* gnu/packages/python.scm (python-chardet, python2-chardet): Update to 3.0.4.
 2017-10-22 17:13:19 +02:00
Cyril Roelandt
69f7f04544
gnu: python2-hypothesis: fix propagated inputs. 
* gnu/packages/python.scm (python2-hypothesis)[propagated-inputs]: Add
  python2-enum34, which was incorrectly listed among the native inputs.
 2017-10-22 17:13:15 +02:00
Nicolas Goaziou
7f7fadb592
gnu: keepassxc: Update to 2.2.1. 
* gnu/packages/password-utils.scm (keepassxc): Update to 2.2.1.
 2017-10-22 16:55:36 +02:00
宋文武
b000294ef7
gnu: qt: Set 'EffectiveSourcePaths' to 'qtbase' for submodules. 
Fixes a regression introduced in 8075b62378.
This allows 'linguist.pro' of 'qttools' to find 'ConfigVersion.cmake.in',
which is needed for 'Qt5LinguistToolsConfigVersion.cmake'.

Reported by Thomas Danckaert <post@thomasdanckaert.be>.

* gnu/packages/qt.scm (qtsvg)[arguments]: Set 'EffectiveSourcePaths' in
the 'configure-qmake' phase.
 2017-10-22 19:37:35 +08:00
Marius Bakke
3e8daecfd8
gnu: vim: Update to 8.0.1207. 
* gnu/packages/vim.scm (vim): Update to 8.0.1207.
 2017-10-22 13:22:59 +02:00
Marius Bakke
d436c6b566
gnu: rottlog: Remove hard-coded '/usr/sbin/sendmail' reference. 
* gnu/packages/admin.scm (rottlog)[arguments]: Add 'patch-paths' phase.
 2017-10-22 13:22:59 +02:00
Marius Bakke
58f0a19c58
gnu: sddm: Fix FTBFS after Qt paths change. 
* gnu/packages/display-managers.scm (sddm)[arguments]: Add 'fix-qml-include'
phase.
 2017-10-22 13:22:59 +02:00
Ricardo Wurmus
03639d0354
gnu: Add python-editdistance. 
* gnu/packages/textutils.scm (python-editdistance): New variable.
 2017-10-22 13:19:58 +02:00
Hartmut Goebel
12a9f7be54
gnu: kservice: Fix comment (number of failing tests). 
* gnu/packages/kde-frameweorks.scm(kservice): Fix comment.
 2017-10-22 12:58:42 +02:00
Hartmut Goebel
ed26b3a807
doc: Clarify description of etc-service-type. 
* doc/guix.texi (Service Reference): Update 'etc-service-type'
  documentation.
 2017-10-22 12:47:29 +02:00
Ricardo Wurmus
a00403c61c
gnu: suil: Update to 0.10.0. 
* gnu/packages/audio.scm (suil): Update to 0.10.0.
[inputs]: Add gtk+.
[description]: Remove version numbers from supported toolkits.
 2017-10-22 12:13:37 +02:00
Ricardo Wurmus
197484147a
gnu: ingen: Update to 0.0.0-2.cc4a4db33. 
* gnu/packages/music.scm (ingen): Update to 0.0.0-2.cc4a4db33.
[inputs]: Replace lv2 with lv2-devel.
 2017-10-22 12:13:37 +02:00
Ricardo Wurmus
5e30032ffb
gnu: Add lv2-devel. 
* gnu/packages/audio.scm (lv2-devel): New variable.
 2017-10-22 12:13:37 +02:00
Ricardo Wurmus
ab8f4a7067
gnu: ganv-devel: Update to 1.5.4-12f7d6b04. 
* gnu/packages/gtk.scm (ganv-devel): Update to 1.5.4-12f7d6b04.
 2017-10-22 12:13:36 +02:00
Ricardo Wurmus
a8bf6b9b9b
gnu: raul-devel: Update to 0.8.9-4db870b2b. 
* gnu/packages/audio.scm (raul-devel): Update to 0.8.9-4db870b2b.
 2017-10-22 12:13:36 +02:00
Ricardo Wurmus
e206de67b6
gnu: Add r-rgraphviz. 
* gnu/packages/graph.scm (r-rgraphviz): New variable.
 2017-10-22 12:12:42 +02:00
Ricardo Wurmus
1ab867bebb
gnu: Add r-pdist. 
* gnu/packages/cran.scm (r-pdist): New variable.
 2017-10-22 12:10:33 +02:00
Julien Lepiller
6efc999678
gnu: Update coq-interval to 3.3.0. 
* gnu/packages/ocaml.scm (coq-interval): Update to 3.3.0.
[inputs]: Add coq-bignums.
 2017-10-22 10:21:25 +02:00
Julien Lepiller
dbfb1a596a
gnu: Add coq-bignums. 
* gnu/packages/ocaml.scm (coq-bignums): New variable.
 2017-10-22 10:21:22 +02:00
Julien Lepiller
3ffd180cc5
gnu: Update coq-coquelicot to 3.0.1. 
* gnu/packages/ocaml.scm (coq-coquelicot): Update to 3.0.1.
 2017-10-22 10:21:19 +02:00
Julien Lepiller
2e331c9c43
gnu: Update coq-mathcomp to 1.6.2. 
* gnu/packages/ocaml.scm (coq-mathcomp): Update to 1..6.2.
 2017-10-22 10:21:16 +02:00
Julien Lepiller
b44f13e04c
gnu: Update coq-flocq to 2.6.0. 
* gnu/packages/ocaml.scm (coq-flocq): Update to 2.6.0.
 2017-10-22 10:21:14 +02:00
Julien Lepiller
6e4da73710
gnu: Update coq to 8.7.0. 
* gnu/packages/ocaml.scm (coq): Update to 8.7.0.
[build-system]: Use ocaml-build-system.
[inputs]: Add python-2.
[arguments]: Disable two failing tests.
 2017-10-22 10:21:11 +02:00
Julien Lepiller
07b4cd3a48
gnu: camlp5: install META file. 
* gnu/packages/ocaml.scm (camlp5) [phases]: New install-meta phase.
 2017-10-22 10:20:50 +02:00
Marius Bakke
3d679ab1e5
gnu: lame: Update to 3.100. 
* gnu/packages/mp3.scm (lame): Update to 3.100.
[source]: Don't hard-code version.
 2017-10-22 00:39:26 +02:00
Marius Bakke
28d0b52164
gnu: python-pyqt: Update to 5.9. 
* gnu/packages/qt.scm (python-pyqt): Update to 5.9.
 2017-10-21 22:38:55 +02:00
Marius Bakke
079e679219
gnu: python-sip: Update to 4.19.3. 
* gnu/packages/qt.scm (python-sip): Update to 4.19.3.
 2017-10-21 22:38:55 +02:00
Tobias Geerinckx-Rice
a4194d1684
gnu: rest: Update to 0.8.1. 
* gnu/packages/gnome.scm (rest): Update to 0.8.1.
 2017-10-21 17:43:46 +02:00
Tobias Geerinckx-Rice
4b9a65bf6e
gnu: gnome-disk-utility: Update to 3.26.1. 
* gnu/packages/gnome.scm (gnome-disk-utility): Update to 3.26.1.
[build-system]: Use meson-build-system.
[native-inputs]: Add gtk+:bin.
 2017-10-21 17:43:46 +02:00
Tobias Geerinckx-Rice
b27991179e
gnu: perl-geo-ip: Update to 1.51. 
* gnu/packages/networking.scm (perl-geo-ip): Update to 1.51.
 2017-10-21 17:43:46 +02:00
Tobias Geerinckx-Rice
5713bbf157
Use HTTPS for bioconductor.org. 
* doc/guix.texi (Invoking guix import, Invoking guix refresh): Use HTTPS for
bioconductor.org URLs.
* gnu/packages/bioinformatics.scm (r-annotate, r-geneplotter, r-genefilter)
(r-deseq2, r-dexseq, r-annotationforge, r-rbgl, r-gseabase, r-category)
(r-gostats, r-shortread, r-biocgenerics, r-biocinstaller, r-biocviews)
(r-biocstyle, r-bioccheck, r-s4vectors, r-iranges, r-genomeinfodbdata)
(r-genomeinfodb, r-xvector, r-genomicranges, r-biobase, r-annotationdbi)
(r-biomart, r-biocparallel, r-biostrings, r-rsamtools, r-delayedarray)
(r-summarizedexperiment, r-genomicalignments, r-rtracklayer)
(r-genomicfeatures, r-graph, r-topgo, r-bsgenome, r-impute, r-seqpattern)
(r-seqlogo, r-motifrg, r-bamsignals, r-mutationalpatterns, r-tximport)
(r-rhdf5, r-chipseq, r-sva, r-affy, r-vsn, r-mzid, r-msnid)
(r-interactivedisplaybase, r-annotationhub)[home-page]: Likewise.
* gnu/packages/bioinformatics.scm (r-txdb-hsapiens-ucsc-hg19-knowngene)
(r-go-db, r-bsgenome-hsapiens-1000genomes-hs37d5, r-org-hs-eg-db)
(r-org-ce-eg-db, r-org-dm-eg-db, r-org-mm-eg-db)
(r-bsgenome-hsapiens-ucsc-hg19, r-bsgenome-mmusculus-ucsc-mm9)
(r-bsgenome-mmusculus-ucsc-mm10, r-txdb-mmusculus-ucsc-mm10-knowngene)
(r-bsgenome-celegans-ucsc-ce6, r-bsgenome-celegans-ucsc-ce10)
(r-bsgenome-dmelanogaster-ucsc-dm3, r-copyhelper)[source, home-page]:
Likewise.
* gnu/packages/statistics.scm (r-rcurl)[source]: Likewise.
* guix/build-system/r.scm (bioconductor-uri): Likewise.
* guix/import/cran.scm (%cran-url, bioconductor-package?)
(bioconductor-data-package?, bioconductor-experiment-package?): Likewise.
 2017-10-21 17:43:40 +02:00
Kei Kebreau
82bdcfe821
gnu: schismtracker: Update to 20170910. 
* gnu/packages/music.scm (schismtracker): Update to 20170910.
 2017-10-21 09:44:28 -04:00
Maxim Cournoyer
fd75eb6cd4
gnu: Fix the hashes of mutated GitHub archives. 
Fixes <https://bugs.gnu.org/28745>.

* gnu/packages/audio.scm (csound): Fix hash.
* gnu/packages/engineering.scm (fritzing): Likewise.
* gnu/packages/erlang.scm (erlang): Likewise.
* gnu/packages/fonts.scm (font-google-material-design-icons): Likewise.
* gnu/packages/graphics.scm (ogre): Likewise.
* gnu/packages/java.scm (java-plexus-interpolation, antlr3): Likewise.
* gnu/packages/serialization.scm (yaml-cpp): Likewise.
* gnu/packages/version-control.scm (libgit2): Likewise.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-20 22:55:51 +02:00
Leo Famulari
7827032a7c
gnu: libvirt: Fix CVE-2017-1000256. 
* gnu/packages/patches/libvirt-CVE-2017-1000256.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/virtualization.scm (libvirt)[source]: Use it.
 2017-10-20 15:36:43 -04:00
Leo Famulari
48f8b07082
gnu: mysql: Update to 5.7.20. 
* gnu/packages/databases.scm (mysql): Update to 5.7.20.
 2017-10-20 15:36:42 -04:00
Leo Famulari
3890df5800
gnu: webkitgtk: Update to 2.18.1. 
* gnu/packages/webkit.scm (webkitgtk): Update to 2.18.1.
 2017-10-20 15:36:39 -04:00
Tobias Geerinckx-Rice
a6e70e1169
gnu: youtube-dl: Update to 2017.10.20. 
* gnu/packages/video.scm (youtube-dl): Update to 2017.10.20.
 2017-10-20 19:48:34 +02:00
Tobias Geerinckx-Rice
5a740d06b6
gnu: dovecot: Update to 2.2.33.2. 
* gnu/packages/mail.scm (dovecot): Update to 2.2.33.2.
 2017-10-20 19:48:34 +02:00
Tobias Geerinckx-Rice
fa9ac83ec4
gnu: ola: Build with protobuf@2. 
This follows up commit dd12d4aad0.

* gnu/packages/protobuf.scm (protobuf-2): New variable.
* gnu/packages/lighting.scm (ola)[propagated-inputs]: Use it.
 2017-10-20 19:48:33 +02:00
Tobias Geerinckx-Rice
77aa706ab6
gnu: font-hack: Update to 3.000. 
* gnu/packages/fonts.scm (font-hack): Update to 3.000.
[source]: Download from new account.
[license]: Explicitly list all licences.
 2017-10-20 19:48:33 +02:00
Julien Lepiller
c812f46058
gnu: Add aegisub. 
* gnu/packages/video.scm (aegisub): New variable.
 2017-10-20 19:41:57 +02:00
Julien Lepiller
6779ae27e6
gnu: Add ffms2. 
* gnu/packages/video.scm (aegisub): New variable.
 2017-10-20 19:41:34 +02:00