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Author SHA1 Message Date
Foo Chuan Wei
a5185d9b64
gnu: Add cl-routes. 
* gnu/packages/lisp-xyz.scm (cl-routes, ecl-routes, sbcl-routes):
  New variables.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-11-19 10:48:41 +01:00
Foo Chuan Wei
002e8bac4b
gnu: Add cl-pileup. 
* gnu/packages/lisp-xyz.scm (cl-pileup, ecl-pileup, sbcl-pileup):
  New variables.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-11-19 10:48:41 +01:00
Foo Chuan Wei
641e3d1288
gnu: Add cl-path-parse. 
* gnu/packages/lisp-xyz.scm (cl-path-parse, ecl-path-parse,
  sbcl-path-parse): New variables.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-11-19 10:48:41 +01:00
Foo Chuan Wei
a35debac97
gnu: Add cl-genhash. 
* gnu/packages/lisp-xyz.scm (cl-genhash, ecl-genhash, sbcl-genhash):
  New variables.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-11-19 10:48:41 +01:00
jgart
c7caeb33d6
gnu: jgmenu: Update to 4.4.0. 
* gnu/packages/xdisorg.scm (jgmenu): Update to 4.4.0.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-11-19 10:48:41 +01:00
Nicolas Goaziou
8dfab10152
gnu: emacs-toc-org: Update to 1.2.0. 
* gnu/packages/emacs-xyz.scm (emacs-toc-org): Update to 1.2.0.
 2021-11-19 10:35:03 +01:00
Lars-Dominik Braun
2a3ca2696b
gnu: Add r-desctools. 
* gnu/packages/statistics.scm (r-desctools): New variable.
 2021-11-19 10:05:08 +01:00
Lars-Dominik Braun
146ca5cd2f
gnu: Add r-exact. 
* gnu/packages/statistics.scm (r-exact): New variable.
 2021-11-19 10:05:08 +01:00
Lars-Dominik Braun
3199b96b2e
gnu: Add r-gld. 
* gnu/packages/statistics.scm (r-gld): New variable.
 2021-11-19 10:05:08 +01:00
Lars-Dominik Braun
6750e5a6e0
gnu: Add r-lmom. 
* gnu/packages/statistics.scm (r-lmom): New variable.
 2021-11-19 10:04:59 +01:00
Nicolas Goaziou
59a22fcc91
gnu: emacs-modus-themes: Update to 1.7.0. 
* gnu/packages/emacs-xyz.scm (emacs-modus-themes): Update to 1.7.0.
 2021-11-19 09:51:13 +01:00
Julien Lepiller
188e3e2e68
gnu: ocaml4.07-merlin: Remove package. 
* gnu/packages/ocaml.scm (ocaml4.07-merlin): Remove package.
 2021-11-19 04:04:46 +01:00
Julien Lepiller
9d662021ae
gnu: ocaml-jst-config: Update to 0.14.1. 
* gnu/packages/ocaml.scm (ocaml-jst-config): Update to 0.14.1.
 2021-11-19 04:03:45 +01:00
Julien Lepiller
eb9fa94cca
gnu: ocaml-base: Update to 0.14.1. 
* gnu/packages/ocaml.scm (ocaml-base): Update to 0.14.1.
 2021-11-19 03:51:16 +01:00
Julien Lepiller
78c930e617
gnu: ocaml-lwt-react: Update to 1.1.4. 
* gnu/packages/ocaml.scm (ocaml-lwt-react): Update to 1.1.4.
 2021-11-19 03:29:43 +01:00
Julien Lepiller
4c8714d406
gnu: ocaml-lwt: Update to 5.4.2. 
* gnu/packages/ocaml.scm (ocaml-lwt): Update to 5.4.2.
 2021-11-19 03:26:35 +01:00
Julien Lepiller
fff3185995
gnu: dune: Update to 2.9.1. 
* gnu/packages/ocaml.scm (dune): Update to 2.9.1.
 2021-11-19 02:54:00 +01:00
Leo Famulari
794f5a05f7
gnu: linux-libre 5.4: Update to 5.4.160. 
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.160.
(linux-libre-5.4-pristine-source): Update hash.
 2021-11-18 20:05:15 -05:00
Leo Famulari
2198d47723
gnu: linux-libre: Update to 5.14.19. 
* gnu/packages/linux.scm (linux-libre-5.14-version): Update to 5.14.19.
(linux-libre-5.14-pristine-source, deblob-scripts-5.14): Update hashes.
 2021-11-18 20:05:09 -05:00
Julien Lepiller
2f1f2ac1e9
gnu: ocaml-alcotest: Update to 1.5.0. 
* gnu/packages/ocaml.scm (ocaml-alcotest): Update to 1.5.0.
 2021-11-19 00:29:53 +01:00
Julien Lepiller
08326f3d62
gnu: Add gplates. 
* gnu/packages/geo.scm (gplates): New variable.
 2021-11-19 00:02:05 +01:00
Julien Lepiller
5012281765
gnu: ocaml-ocp-index: Update to 1.3.2. 
* gnu/packages/ocaml.scm (ocaml-ocp-index): Update to 1.3.2.
 2021-11-18 23:48:50 +01:00
Jacob Hrbek
92d6f17dfd
gnu: Add shell2batch. 
* gnu/packages/crates-io.scm (shell2batch): New variable.
* gnu/packages/patches/rust-shell2batch-lint-fix.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2021-11-18 23:35:37 +01:00
Vagrant Cascadian
a8eea7a51e
gnu: qtltools: Fix typo. 
* gnu/packages/bioinformatics.scm (qtltools)[description]: Switch from "allows
  to go" to "allows going".
 2021-11-18 14:20:07 -08:00
Vagrant Cascadian
b23d7aa880
gnu: r-bgeecall: Fix typo. 
* gnu/packages/bioconductor.scm (r-bgeecall)[description]: Switch from "allows
  to generate" to "allows generating".
 2021-11-18 14:20:03 -08:00
Vagrant Cascadian
de0a3b578e
gnu: python-ueberzug: Fix typo. 
* gnu/packages/python-xyz.scm (python-ueberzug)[description]: Use "draws"
  instead of "allows to draw".
 2021-11-18 14:19:59 -08:00
Vagrant Cascadian
6fc80d9d4c
gnu: r-msfeatures: Fix typos. 
* gnu/packages/bioconductor.scm (r-msfeatures)[description]: Switch from
  "allows to" to "can be used" and from "allows to aggregate" to "allows
  aggregating".
 2021-11-18 14:19:54 -08:00
Julien Lepiller
b1acfb676a
gnu: ocaml-ssl: Update to 0.5.10. 
* gnu/packages/ocaml.scm (ocaml-ssl): Update to 0.5.10.
 2021-11-18 23:17:08 +01:00
Efraim Flashner
dcc4028c0e
gnu: irrlicht: Update home-page. 
* gnu/packages/games.scm (irrlicht)[home-page]: Update to new home-page.
 2021-11-18 21:13:23 +02:00
Ricardo Wurmus
93b2ce1197
gnu: r-tximeta: Update to 1.12.3. 
* gnu/packages/bioconductor.scm (r-tximeta): Update to 1.12.3.
 2021-11-18 13:18:01 +00:00
Ricardo Wurmus
6a5e5bb9e2
gnu: r-biodb: Update to 1.2.1. 
* gnu/packages/bioconductor.scm (r-biodb): Update to 1.2.1.
 2021-11-18 13:18:01 +00:00
Ricardo Wurmus
13f8140290
gnu: r-chromstar: Update to 1.20.2. 
* gnu/packages/bioconductor.scm (r-chromstar): Update to 1.20.2.
 2021-11-18 13:18:00 +00:00
Ricardo Wurmus
34d17d5f62
gnu: r-scran: Update to 1.22.1. 
* gnu/packages/bioconductor.scm (r-scran): Update to 1.22.1.
 2021-11-18 13:18:00 +00:00
Ricardo Wurmus
0f72bdada5
gnu: r-hdf5array: Update to 1.22.1. 
* gnu/packages/bioconductor.scm (r-hdf5array): Update to 1.22.1.
 2021-11-18 13:18:00 +00:00
Ricardo Wurmus
ddb9d228b4
gnu: r-s4vectors: Update to 0.32.2. 
* gnu/packages/bioconductor.scm (r-s4vectors): Update to 0.32.2.
 2021-11-18 13:18:00 +00:00
Ricardo Wurmus
ef5bbc3416
gnu: r-biocset: Update to 1.8.1. 
* gnu/packages/bioconductor.scm (r-biocset): Update to 1.8.1.
 2021-11-18 13:18:00 +00:00
Ricardo Wurmus
3cfeeace83
gnu: r-biocpkgtools: Update to 1.12.2. 
* gnu/packages/bioconductor.scm (r-biocpkgtools): Update to 1.12.2.
 2021-11-18 13:17:59 +00:00
Ricardo Wurmus
6350413325
gnu: r-mixomics: Update to 6.18.0. 
* gnu/packages/bioconductor.scm (r-mixomics): Update to 6.18.0.
 2021-11-18 13:17:59 +00:00
Ricardo Wurmus
a03c84244d
gnu: r-rsubread: Update to 2.8.1. 
* gnu/packages/bioconductor.scm (r-rsubread): Update to 2.8.1.
 2021-11-18 13:17:59 +00:00
Ricardo Wurmus
d30d9c6001
gnu: r-geoquery: Update to 2.62.1. 
* gnu/packages/bioconductor.scm (r-geoquery): Update to 2.62.1.
[propagated-inputs]: Add r-r-utils.
 2021-11-18 13:17:59 +00:00
Ricardo Wurmus
f4b108d872
gnu: r-icobra: Update to 1.22.1. 
* gnu/packages/bioconductor.scm (r-icobra): Update to 1.22.1.
 2021-11-18 13:17:58 +00:00
Ricardo Wurmus
7e9a13d789
gnu: r-ggtree: Update to 3.2.1. 
* gnu/packages/bioconductor.scm (r-ggtree): Update to 3.2.1.
 2021-11-18 13:17:58 +00:00
Ricardo Wurmus
e52eb93765
gnu: r-treeio: Update to 1.18.1. 
* gnu/packages/bioconductor.scm (r-treeio): Update to 1.18.1.
 2021-11-18 13:17:58 +00:00
Ricardo Wurmus
34ba8b256b
gnu: r-systempiper: Update to 2.0.1. 
* gnu/packages/bioconductor.scm (r-systempiper): Update to 2.0.1.
 2021-11-18 13:17:58 +00:00
Ricardo Wurmus
6b1375d3af
gnu: r-msnbase: Update to 2.20.1. 
* gnu/packages/bioconductor.scm (r-msnbase): Update to 2.20.1.
 2021-11-18 13:17:58 +00:00
Ricardo Wurmus
f917fa4e50
gnu: r-ensembldb: Update to 2.18.2. 
* gnu/packages/bioconductor.scm (r-ensembldb): Update to 2.18.2.
 2021-11-18 13:17:57 +00:00
Ricardo Wurmus
30038c5738
gnu: r-chipseeker: Update to 1.30.2. 
* gnu/packages/bioconductor.scm (r-chipseeker): Update to 1.30.2.
 2021-11-18 13:17:57 +00:00
Ricardo Wurmus
443ed83bc3
gnu: r-annotationdbi: Update to 1.56.2. 
* gnu/packages/bioconductor.scm (r-annotationdbi): Update to 1.56.2.
 2021-11-18 13:17:57 +00:00
Nicolas Goaziou
039c3848c3
gnu: wireshark: Update to 3.4.10. 
* gnu/packages/networking.scm (wireshark): Update to 3.4.10.
 2021-11-18 09:18:41 +01:00
Nicolas Goaziou
f4aa543f74
gnu: emacs-elfeed-score: Update to 1.2.0. 
* gnu/packages/emacs-xyz.scm (emacs-elfeed-score): Update to 1.2.0.
 2021-11-18 09:13:22 +01:00
zimoun
7537ec816f
gnu: coq-stdpp: Adjust '#:make-flags'. 
* gnu/packages/coq.scm (coq-stdpp)[arguments]<#:make-flags>: Set install
destination.
<#:phases>: Remove replace 'install.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2021-11-18 04:30:41 +01:00
zimoun
4423caece6
gnu: coq-equations: Adjust '#:make-flags'. 
* gnu/packages/coq.scm (coq-equations)[arguments]<#:make-flags>: Set install
destination.
<#:phases>: Remove replace 'install.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2021-11-18 04:25:38 +01:00
zimoun
5d7d64ff85
gnu: coq-autosubst: Adjust '#:make-flags'. 
* gnu/packages/coq.scm (coq-autosubst)[arguments]<#:make-flags>: Set install
destination.
<#:phases>: Remove replace 'install.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2021-11-18 04:22:21 +01:00
zimoun
7b93c6d777
gnu: coq-mathcomp: Adjust '#:make-flags'. 
* gnu/packages/coq.scm (coq-mathcomp)[arguments]<#:make-flags>: Set install
destination.
<#:phases>: Remove replace 'install.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2021-11-18 04:08:08 +01:00
zimoun
2d60af4d6d
gnu: Add coq-semantics. 
* gnu/packages/coq.scm (coq-semantics): New variable.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2021-11-18 04:08:00 +01:00
Vagrant Cascadian
e930d4a747
gnu: perl-tie-handle-offset: Fix typo. 
* gnu/packages/perl.scm (perl-tie-handle-offset)[description]: Fix "This
  module" typo.
 2021-11-17 17:46:13 -08:00
Vagrant Cascadian
67900b9555
gnu: perl-business-ismn: Fix typo. 
* gnu/packages/perl.scm (perl-business-ismn)[description]: Fix "This module"
  typo.
 2021-11-17 17:46:05 -08:00
Vagrant Cascadian
e52032ac1d
gnu: perl-business-issn: Fix typo. 
* gnu/packages/perl.scm (perl-business-issn)[description]: Fix "This module"
  typo.
 2021-11-17 17:46:01 -08:00
Vagrant Cascadian
f4f93b38aa
gnu: perl-business-isbn: Fix typo. 
* gnu/packages/perl.scm (perl-business-isbn)[description]: Fix "This module"
  typo.
 2021-11-17 17:45:53 -08:00
Vagrant Cascadian
8f6ac12fe4
gnu: perl-test-dir: Fix typo. 
* gnu/packages/perl-check.scm (perl-test-dir)[description]: Fix "This module"
  typo.
 2021-11-17 17:45:49 -08:00
Vagrant Cascadian
e782bb901b
gnu: python-sgmllib3k: Fix typo. 
* gnu/packages/python-xyz.scm (python-sgmllib3k)[description]: Fix "This
  package" typo.
 2021-11-17 17:45:45 -08:00
Vagrant Cascadian
fb1cd494d7
gnu: rust-fever-api-0.2: Fix typo. 
* gnu/packages/crates-io.scm (rust-fever-api-0.2)[description]: Fix "This
  package" typo.
 2021-11-17 17:45:38 -08:00
Vagrant Cascadian
747403aca5
gnu: perl-test-nowarnings: Fix typo. 
* gnu/packages/perl-check.scm (perl-test-nowarnings)[description]: Fix "This
  module" typo.
 2021-11-17 17:45:21 -08:00
Tobias Geerinckx-Rice
407594d21b
gnu: foo2zjs: Use archived home page. 
* gnu/packages/cups.scm (foo2zjs)[home-page]: Link to the Web Archive'd
URL.
 2021-11-18 01:12:21 +01:00
Tobias Geerinckx-Rice
90c524c94e
gnu: sg3-utils: Omit static library. 
* gnu/packages/scsi.scm (sg3-utils)[arguments]: Add "--disable-static"
to #:configure-flags.
 2021-11-18 01:12:15 +01:00
Tobias Geerinckx-Rice
f41fbda9db
gnu: sg3-utils: Update to 1.47. 
* gnu/packages/scsi.scm (sg3-utils): Update to 1.47.
 2021-11-18 01:08:30 +01:00
Marius Bakke
e3f70c947f
gnu: ungoogled-chromium: Update to 96.0.4664.45-0. 
* gnu/packages/chromium.scm (%preserved-third-party-files): Adjust for M96.
(%chromium-version): Set to 96.0.4664.45.
(%ungoogled-origin, ungoogled-chromium): Update hashes.
 2021-11-17 23:57:52 +01:00
Marius Bakke
b432cd1189
gnu: libtorrent-rasterbar: Update to 1.2.14. 
* gnu/packages/bittorrent.scm (libtorrent-rasterbar): Update to 1.2.14.
[source](uri): Adjust tag name.
[build-system]: Change to CMAKE-BUILD-SYSTEM.
[arguments]: Adjust accordingly.  Override the check phase to fake the time
for one test, and disable another.
[native-inputs]: Add LIBFAKETIME.
 2021-11-17 23:57:52 +01:00
Foo Chuan Wei
94fbcf7b78
gnu: Add rcs-blame. 
* gnu/packages/version-control.scm (rcs-blame): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-11-17 23:05:59 +01:00
Foo Chuan Wei
b737607c54
gnu: rcs: Install rcsfreeze. 
* gnu/packages/version-control.scm (rcs): Install rcsfreeze.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-11-17 23:05:58 +01:00
Josselin Poiret
7c4142628a
gnu: system: Improve location of some configuration warnings. 
* gnu/bootloader.scm (%warn-target-field-deprecation): Remove it.
* gnu/bootloader.scm (warn-target-field-deprecation): Use
define-with-syntax-properties.
* gnu/system.scm (ensure-setuid-program-list): Ditto.  Also rename the
'location' variable to 'properties'.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-11-17 23:05:58 +01:00
Philip McGrath
cb768f3860
gnu: tidy-html: Update to 5.8.0. 
* gnu/packages/web.scm (tidy-html): Update to 5.8.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-11-17 23:05:58 +01:00
Michael Rohleder
609066e996
gnu: xfce4-whiskermenu-plugin: Update to 2.6.1. 
* gnu/packages/xfce.scm (xfce4-whiskermenu-plugin): Update to 2.6.1.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-11-17 23:05:57 +01:00
Michael Rohleder
7fe5742e03
gnu: ristretto: Update to 0.12.0. 
* gnu/packages/xfce.scm (ristretto): Update to 0.12.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-11-17 23:05:57 +01:00
Michael Rohleder
538a755341
gnu: xfce4-cpugraph-plugin: Update to 1.2.5. 
* gnu/packages/xfce.scm (xfce4-cpugraph-plugin): Update to 1.2.5.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-11-17 23:05:57 +01:00
jgart
5a6af48408
gnu: shellcheck: Update to 0.8.0. 
* gnu/packages/haskell-apps.scm (shellcheck): Update to 0.8.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-11-17 23:05:57 +01:00
Xinglu Chen
77483d6b61
gnu: perl-inline-c: Patch paths to ‘make’. 
* gnu/packages/perl.scm (perl-inline-c)[arguments]<#:phases>{patch-paths}: New
  phase.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-11-17 23:05:57 +01:00
Alexey Abramov
4ace645506
services: docker: Add 'environment-variables' configuration field. 
* gnu/services/docker.scm (docker-configuration):  Add the field
(docker-shepherd-service): Pass the list of defined variables to
make-forkexec-constructor.
* doc/guix.texi (Miscellaneous Services): Update doc.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-11-17 23:05:56 +01:00
Vagrant Cascadian
6bffa13040
gnu: perl-log-message: Fix typo. 
* gnu/packages/perl.scm (perl-log-message)[description]: Correctly use "lets
  you".
 2021-11-17 13:29:35 -08:00
Nicolas Goaziou
ee98b30a69
gnu: emacs-eldev: Update to 0.10. 
* gnu/packages/emacs-xyz.scm (emacs-eldev): Update to 0.10.
[arguments]: Enable some tests, disable some others.  Remove #t at the end of phases.
 2021-11-17 22:12:26 +01:00
Vagrant Cascadian
b066c9b03d
gnu: home: services: Fix typo. 
* gnu/home/services.scm (compute-on-first-login-script): Fix spelling of
  "appropriate".
 2021-11-17 12:55:24 -08:00
Ricardo Wurmus
30474f25d0
gnu: python-numcodecs: Unbundle c-blosc. 
* gnu/packages/python-xyz.scm (python-numcodecs)[source]: Add snippet to
remove bundled c-blosc sources and pre-built Cython files.
[arguments]: Add build phase 'disable-avx2 and 'unbundle; replace 'check phase
to run pytest; disable tests.
[inputs]: Add c-blosc, lz4, zlib, and zstd.
[native-inputs]: Add python-cython.
 2021-11-17 20:45:58 +00:00
Ricardo Wurmus
7850856591
gnu: c-blosc: Build with external libraries and without AVX2. 
* gnu/packages/compression.scm (c-blosc)[inputs]: Add lz4, snappy, zlib, and
zstd.
[arguments]: Disable building with AVX2 instructions; prefer our compression
packages over bundled sources.
 2021-11-17 20:45:54 +00:00
phodina
41c8ee1b50
gnu: font-adobe-source-code-pro: Update to 2.032R-ro-1.052R-it-1.012R-VAR. 
* gnu/packages/fonts (font-adobe-source-code-pro): Update to
2.032R-ro-1.052R-it-1.012R-VAR.
[commit]: Adjust version rewriting regexp accordingly.

Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
 2021-11-17 18:11:40 +01:00
Vivien Kraus
948137b62a
gnu: Add emacs-vala-mode. 
* gnu/packages/emacs-xyz (emacs-vala-mode): New variable.

Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
 2021-11-17 18:01:19 +01:00
Efraim Flashner
99084abd80
gnu: xfig: Update to 3.2.8b. 
* gnu/packages/xfig.scm (xfig): Update to 3.2.8b.
[native-inputs]: Add ghostscript.
 2021-11-17 17:48:18 +02:00
Nicolas Goaziou
c3931a5454
gnu: fet: Update to 6.2.2. 
* gnu/packages/education.scm (fet): Update to 6.2.2.
 2021-11-17 15:06:30 +01:00
Nicolas Goaziou
8ae8c327dd
gnu: emacs-csharp-mode: Update to 1.1.0. 
* gnu/packages/emacs-xyz.scm (emacs-csharp-mode): Update to 1.1.0.
 2021-11-17 15:00:53 +01:00
Nicolas Goaziou
d14f006355
gnu: emacs-vertico: Update to 0.16. 
* gnu/packages/emacs-xyz.scm (emacs-vertico): Update to 0.16.
 2021-11-17 14:59:33 +01:00
Nicolas Goaziou
9f6f05aa7b
gnu: emacs-corfu: Update to 0.15. 
* gnu/packages/emacs-xyz.scm (emacs-corfu): Update to 0.15.
 2021-11-17 14:54:40 +01:00
Ricardo Wurmus
aad93806ac
gnu: python-hnswlib: Disable native optimizations. 
* gnu/packages/python-xyz.scm (python-hnswlib)[arguments]: Add build phase
'disable-native-optimization.
 2021-11-17 11:00:02 +00:00
Pierre Neidhardt
4eb7ec53dd
gnu: sbcl-cl-tld: Update to 20211117. 
* gnu/packages/lisp-xyz.scm (sbcl-cl-tld): Update to 20211117.
 2021-11-17 09:36:33 +01:00
Efraim Flashner
62e707d67c
gnu: julia: Update to 1.6.3. 
* gnu/packages/julia.scm (julia): Update to 1.6.3.
 2021-11-17 08:45:22 +02:00
Tobias Geerinckx-Rice
02a67810e5
gnu: git: Update to 2.34.0. 
* gnu/packages/version-control.scm (git): Update to 2.34.0.
 2021-11-17 00:45:48 +01:00
jgart
6ed2c5e2a4
gnu: fennel: Update to 1.0.0. 
* gnu/packages/lua.scm (fennel): Update to 1.0.0.
[origin]: Remove unneeded snippet.
[arguments]: Remove custom 'patch-lua-calls, 'install-manpage phases.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-11-16 21:04:58 +02:00
Jelle Licht
eb4edd7fde
gnu: emacs-flymake-kondor: Update to 0.1.1-0.389b513. 
* gnu/packages/emacs-xyz.scm (emacs-flymake-kondor): Update to 0.1.1-0.389b513.
[propagated-inputs]: Remove emacs-flymake-quickdef.
 2021-11-16 17:36:20 +01:00
Ludovic Courtès
7dce1df34b
gnu: Add texlive-xifthen. 
* gnu/packages/tex.scm (texlive-xifthen): New variable.
 2021-11-16 16:59:52 +01:00
Greg Hogan
912cb917b8
gnu: aws-sdk-cpp: Enable text-to-speech library. 
* gnu/packages/cpp.scm (aws-sdk-cpp)[inputs]: Add pulseaudio dependency
so that text-to-speech library is included in the build.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-11-16 16:59:52 +01:00
Greg Hogan
14f540593b
gnu: aws-checksums: Replace patch. 
* gnu/packages/c.scm (aws-checksums): Replace patch.
[arguments]: Fix CMAKE_PREFIX_PATH.
[source]: Remove patch.
* gnu/packages/patches/aws-checksums-cmake-prefix.patch:
Delete file.
* gnu/local.mk: Remove it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-11-16 16:59:52 +01:00
Greg Hogan
963ebbc62c
gnu: aws-c-event-stream: Replace patch. 
* gnu/packages/c.scm (aws-c-event-stream): Replace patch.
[arguments]: Fix CMAKE_PREFIX_PATH.
[source]: Remove patch.
* gnu/packages/patches/aws-c-event-stream-cmake-prefix.patch:
Delete file.
* gnu/local.mk: Remove it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-11-16 16:59:52 +01:00
Greg Hogan
c769b8c2b5
gnu: aws-sdk-cpp: Update to 1.9.136. 
* gnu/packages/cpp.scm (aws-sdk-cpp): Update to 1.9.136.
[arguments]: Fix CMAKE_PREFIX_PATH.
[source]: Remove patches.
* gnu/packages/patches/aws-sdk-cpp-cmake-prefix.patch,
gnu/packages/patches/aws-sdk-cpp-disable-network-tests.patch,
gnu/packages/patches/aws-sdk-cpp-disable-werror.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-11-16 16:59:51 +01:00
Greg Hogan
37db6db284
gnu: aws-crt-cpp: Update to 0.17.1. 
* gnu/packages/c.scm (aws-crt-cpp): Update to 0.17.1.
[arguments]: Fix CMAKE_PREFIX_PATH, disable network tests.
[source]: Remove patches.
* gnu/packages/patches/aws-crt-cpp-cmake-prefix.patch,
gnu/packages/patches/aws-crt-cpp-disable-networking-tests.patch:
Delete files.
* gnu/local.mk: Remove them.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-11-16 16:59:51 +01:00
Greg Hogan
d5c9f52a37
gnu: aws-c-mqtt: Replace patch. 
* gnu/packages/c.scm (aws-c-mqtt): Replace patch.
[arguments]: Fix CMAKE_PREFIX_PATH.
[source]: Remove patch.
* gnu/packages/patches/aws-c-mqtt-cmake-prefix.patch: Delete file.
* gnu/local.mk: Remove it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-11-16 16:59:51 +01:00
Greg Hogan
2d61354788
gnu: aws-c-s3: Update to 0.1.26. 
* gnu/packages/c.scm (aws-c-s3): Update to 0.1.26.
[arguments]: Fix CMAKE_PREFIX_PATH, disable network tests.
[source]: Remove patches.
* gnu/packages/patches/aws-c-s3-cmake-prefix.patch,
gnu/packages/patches/aws-c-s3-disable-networking-tests.patch:
Delete files.
* gnu/local.mk: Remove them.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-11-16 16:59:51 +01:00
Greg Hogan
05be89ac5b
gnu: aws-c-auth: Update to 0.6.4. 
* gnu/packages/c.scm (aws-c-auth): Update to 0.6.4.
[arguments]: Fix CMAKE_PREFIX_PATH, disable network tests.
[source]: Add and remove patches.
* gnu/packages/patches/aws-c-auth-install-private-headers.patch:
New file.
* gnu/packages/patches/aws-c-auth-cmake-prefix.patch,
gnu/packages/patches/aws-c-auth-disable-networking-tests.patch:
Delete files.
* gnu/local.mk: Add and remove them.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-11-16 16:59:51 +01:00
Greg Hogan
cff8a12a0a
gnu: aws-c-compression: Update to 0.2.14. 
* gnu/packages/c.scm (aws-c-compression): Update to 0.2.14.
[arguments]: Fix CMAKE_PREFIX_PATH.
[source]: Remove patch.
* gnu/packages/patches/aws-c-compression-cmake-prefix.patch:
Delete file.
* gnu/local.mk: Remove it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-11-16 16:59:51 +01:00
Greg Hogan
1a0ed46097
gnu: aws-c-http: Update to 0.6.7. 
* gnu/packages/c.scm (aws-c-http): Update to 0.6.7.
[arguments]: Fix CMAKE_PREFIX_PATH, disable network tests.
[source]: Remove patches.
* gnu/packages/patches/aws-c-http-cmake-prefix.patch,
gnu/packages/patches/aws-c-http-disable-networking-tests.patch:
Delete files.
* gnu/local.mk: Remove them.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-11-16 16:59:50 +01:00
Greg Hogan
4ff5cd6b06
gnu: aws-c-cal: Update to 0.5.12. 
* gnu/packages/c.scm (aws-c-cal): Update to 0.5.12.
[arguments]: Fix CMAKE_PREFIX_PATH.
[source]: Remove patch.
* gnu/packages/patches/aws-c-cal-cmake-prefix.patch: Delete file.
* gnu/local.mk: Remove it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-11-16 16:59:50 +01:00
Greg Hogan
2a32dedfbf
gnu: aws-c-io: Update to 0.10.9. 
* gnu/packages/c.scm (aws-c-io): Update to 0.10.9.
[arguments]: Fix CMAKE_PREFIX_PATH, disable network tests.
[source]: Remove patches.
* gnu/packages/patches/aws-c-io-cmake-prefix.patch,
gnu/packages/patches/aws-c-io-disable-networking-tests.patch:
Delete files.
* gnu/local.mk: Remove them.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-11-16 16:59:50 +01:00
Greg Hogan
5715a07af3
gnu: aws-c-common: Update to 0.6.11. 
* gnu/packages/c.scm (aws-c-common): Update to 0.6.11.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-11-16 16:59:50 +01:00
Greg Hogan
cf48bf8607
gnu: s2n: Update to 1.1.0. 
* gnu/packages/tls.scm (s2n): Update to 1.1.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-11-16 16:59:50 +01:00
Ludovic Courtès
206f2693fd
gnu: guix: Update to 9bbbac6. 
* gnu/packages/package-management.scm (guix): Update to 9bbbac6.
 2021-11-16 16:59:50 +01:00
Julien Lepiller
0a9a00b34c
gnu: pplacer: Fix build. 
* gnu/packages/bioinformatics.scm (pplacer): Add missing input.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-11-16 15:43:51 +02:00
Julien Lepiller
fd9b7f8376
gnu: ocaml4.07-odoc: Fix inputs. 
* gnu/packages/ocaml.scm (ocaml4.07-odoc): Fix inputs.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-11-16 15:43:51 +02:00
Julien Lepiller
6347ac8e40
gnu: Add ocaml4.07-bisect-ppx. 
* gnu/packages/ocaml.scm (ocaml4.07-bisect-ppx): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-11-16 15:43:51 +02:00
Julien Lepiller
c10ba562be
gnu: ocaml-lwt: Remove unneeded input. 
* gnu/packages/ocaml.scm (ocaml-lwt)[native-inputs]: Remove
ocaml-bisect-ppx.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-11-16 15:43:51 +02:00
Julien Lepiller
b531ba4304
gnu: Add ocaml4.07-alcotest. 
* gnu/packages/ocaml.scm (ocaml4.07-alcotest): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-11-16 15:43:51 +02:00
Julien Lepiller
8000fc4fa0
gnu: Add ocaml4.07-re. 
* gnu/packages/ocaml.scm (ocaml4.07-re): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-11-16 15:43:51 +02:00
Ludovic Courtès
9bbbac6783
gnu: Add texlive-latex-textpos. 
* gnu/packages/tex.scm (texlive-latex-textpos): New variable.
 2021-11-16 14:38:02 +01:00
Ludovic Courtès
e699eb3bcc
gnu: Add texlive-translator. 
* gnu/packages/tex.scm (texlive-translator): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2021-11-16 14:38:02 +01:00
Ludovic Courtès
c322d97832
home: services: bash: Emit 'extra-content' first again. 
Fixes a regression introduced in
4b96998292 that would less to a
'tests/guix-home.sh' failure.

* gnu/home/services/shells.scm (add-bash-configuration)[file-if-not-empty]:
Move EXTRA-CONTENT first.
 2021-11-16 14:38:01 +01:00
Ludovic Courtès
e5d8302b2c
home: services: Fix typo. 
Reinstates 4dcec60fa6, minus the
regression it introduced.

* gnu/home/services.scm (compute-on-first-login-script): Use
'program-file', not 'gexp->script'.
 2021-11-16 14:37:34 +01:00
Vivien Kraus
b4b2bbf4fb
services: openssh: Collect all keys for all users. 
Fixes <https://issues.guix.gnu.org/51487>

* gnu/services/ssh.scm (extend-openssh-authorized-keys): ensure that no key is forgotten.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2021-11-16 14:34:28 +01:00
Efraim Flashner
b2f8186590
Revert "home-services: Demonadify 'on-first-login' handling." 
This commit breaks building guix home
guix home: error: reference to invalid output 'out' of derivation \
    '/gnu/store/86zc4rijsswmfqnaq8rwixcxjl2zyl1c-on-first-login.drv'

This reverts commit 4dcec60fa6.
 2021-11-16 15:31:07 +02:00
Jean-Baptiste Volatier
546f8537aa
gnu: Add julia-sundials-jull 
* gnu/packages/julia-jll.scm (julia-sundials-jll): New variable.
* gnu/packages/maths.scm (sundials-julia): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-11-16 15:16:44 +02:00
Efraim Flashner
e9a5fb7ad9
Revert "gnu: Add cl-https-everywhere." 
With thanks to jlicht on IRC:
sbcl-package->cl-source-package assumes all inputs are packages
which isn't the case here.

This reverts commit e31d48d8db.
 2021-11-16 15:06:54 +02:00
Efraim Flashner
11446953ba
gnu: julia-pycall: Update to 1.92.5. 
* gnu/packages/julia-xyz.scm (julia-pycall): Update to 1.92.5.
 2021-11-16 14:40:03 +02:00
Jean-Baptiste Volatier
3af351a7de
build-system/julia: Enable Julia Pkg to find installed packages. 
Julia's built-in package manager (Pkg) looks for packages in
JULIA_DEPOT_PATH/packages/PACKAGENAME/XXXX, where XXXX is a string
encoding package UUID and SHA1 of files.  The link-depot phase creates
a link at the correct location to allow Pkg to find packages that were
already installed by Guix.

* guix/build/julia-build-system.scm (link-depot): New phase.
(%package-path): Modified package path from packages/ to loadpath/.
(project.toml->uuid): New procedure, retrive package uuid from TOML file.
(precompile, check): Adjust to the change in paths.
(%standard-phases): Add link-depot phase.
(julia-build): Add julia-package-uuid keyword.
* guix/build-system/julia.scm (julia-build): Also use the
julia-package-uuid keyword.
* gnu/packages/julia-jll.scm (julia-bzip2-jll, julia-cairo-jll,
julia-compilersupportlibraries-jll, julia-expat-jll, julia-ffmpeg-jll,
julia-fontconfig-jll, julia-freetype2-jll, julia-fribidi-jll,
julia-gettext-jll, julia-glib-jll, julia-gr-jll, julia-gumbo-jll,
julia-imagemagick-jll, julia-jllwrappers-jll, julia-jpegturbo-jll,
julia-lame-jll, julia-libass-jll, julia-libfdk-aac-jll,
julia-libffi-jll, julia-libgcrypt-jll, julia-libglvnd-jll,
julia-libgpg-error-jll, juli-libiconv-jll, julia-libmount-jll,
julia-libpng-jll, julia-libsass-jll, julia-libtiff-jll,
julia-libuuid-jll, julia-libvorbis-jll, julia-lzo-jll,
julia-mbedtls-jll, julia-ogg-jll, julia-openspecfun-jll,
julia-openssl-jll, julia-opus-jll, julia-pcre-jll, julia-pixman-jll,
julia-qt5base-jll, julia-wayland-jll, julia-wayland-protocols-jll,
julia-x264-jll, julia-x265-jll, julia-xkbcommon-jll, julia-xml2-jll,
julia-xorg-libpthread-stubs-jll, julia-xorg-libx11-jll,
julia-xorg-libxau-jll, julia-xorg-libxcb-jll, julia-xorg-libxcursor-jll,
julia-xorg-libxdmcp-jll, julia-xorg-libxext-jll,
julia-xorg-libxfixes-jll, julia-xorg-libxi-jll,
julia-xorg-libxinerama-jll, julia-xorg-libxkbfile-jll,
julia-xorg-libxrandr-jll, julia-xorg-libxrender-jll,
julia-xorg-xcb-util-jll, julia-xorg-xcb-util-keysyms-jll,
julia-xorg-xcb-util-renderutil-jll, julia-xorg-xcb-util-wm-jll,
julia-xorg-xkbcomp-jll, julia-xorg-xkeyboard-config-jll,
julia-xorg-xtrans-jll, julia-xslt-jll, julia-zlib-jll, julia-zstd-jll)
[argument]: Adjust the order of the phases to the change in the
julia-build-system.
* gnu/packages/julia-xyz.scm (julia-bufferedstreams, julia-calculus,
julia-dataframes, julia-datavalues, julia-distances, julia-documenter,
julia-dualnumbers, julia-ellipsisnotation, julia-expronicon,
julia-fileio, julia-fixedpointnumbers, julia-functionwrappers,
julia-fuzzycompletions, julia-genericlinearalgebra, julia-genericschur,
julia-geometrybasics, julia-imagemagick, julia-infinity,
julia-matrixfactorizations, julia-media, julia-missings, julia-nnlib,
julia-optimtestproblems, julia-orderedcollections, julia-prettytables,
julia-pycall, julia-quadmath, julia-safetests, julia-stackviews)
[arguments]: Correct paths to reflect change of %package-path modify
order of phases as link-depot needs to run on an unmodified src
directory add package-name-uuid keyword argument to packages without
Project.toml file.
* gnu/packages/julia.scm (julia)[native-search-paths]: Correct paths to
reflect change of %package-path modify order of phases as link-depot
needs to run on an unmodified src directory.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-11-16 14:39:51 +02:00
Pierre Neidhardt
e31d48d8db
gnu: Add cl-https-everywhere. 
* gnu/packages/lisp-xyz.scm (cl-https-everywhere, sbcl-cl-https-everywhere):
New variables.
 2021-11-16 12:51:45 +01:00
Pierre Neidhardt
2d55463053
gnu: Add vernacular. 
* gnu/packages/lisp-xyz.scm (cl-vernacular, sbcl-vernacular): New variables.
 2021-11-16 12:51:45 +01:00
Pierre Neidhardt
f1dd327996
gnu: Add fxml. 
* gnu/packages/lisp-xyz.scm (cl-fxml, sbcl-fxml): New variables.
 2021-11-16 12:51:45 +01:00
Pierre Neidhardt
3ddfe4c1a0
gnu: Add xpath. 
* gnu/packages/lisp-xyz.scm (cl-xpath, sbcl-xpath): New variables.
 2021-11-16 12:51:45 +01:00
Pierre Neidhardt
e37bb39971
gnu: Add overlord. 
* gnu/packages/lisp-xyz.scm (cl-overlord, sbcl-overlord): New variables.
 2021-11-16 12:51:45 +01:00
Pierre Neidhardt
3f6953b54e
gnu: Add cxml-rng. 
* gnu/packages/lisp-xyz.scm (cl-cxml-rng, sbcl-cxml-rng): New variables.
 2021-11-16 12:51:45 +01:00
Pierre Neidhardt
d0c3efb78a
gnu: Add bit-smasher. 
* gnu/packages/lisp-xyz.scm (cl-bit-smasher, ecl-bit-smasher, sbcl-bit-smasher): New variables.
 2021-11-16 12:51:44 +01:00
Pierre Neidhardt
de28e45e0f
gnu: Add cl-base58. 
* gnu/packages/lisp-xyz.scm (cl-base58, ecl-cl-base58, sbcl-cl-base58): New variables.
 2021-11-16 12:51:44 +01:00
Pierre Neidhardt
6366aaf7cc
gnu: Add exit-hooks. 
* gnu/packages/lisp-xyz.scm (cl-exit-hooks, ecl-exit-hooks, sbcl-exit-hooks):
New variables.
 2021-11-16 12:47:00 +01:00
Pierre Neidhardt
462bb6cca8
gnu: Add cl-strftime. 
* gnu/packages/lisp-xyz.scm (cl-strftime, ecl-cl-strftime, sbcl-cl-strftime):
New variables.
 2021-11-16 12:46:59 +01:00
Pierre Neidhardt
342f3de742
gnu: Add sbcl-cl-tld. 
* gnu/packages/lisp-xyz.scm (sbcl-cl-tld): New variable.
 2021-11-16 12:46:59 +01:00
Pierre Neidhardt
66cfc6ad12
gnu: sbcl-cl-webkit: Update to 3.2.0. 
* gnu/packages/lisp-xyz.scm (sbcl-cl-webkit): Update to 3.2.0.
 2021-11-16 12:46:59 +01:00
Pierre Neidhardt
95a0f249ab
gnu: sbcl-cmd: Update to 20211009. 
* gnu/packages/lisp-xyz.scm (sbcl-cmd): Update to 20211009.
 2021-11-16 12:46:59 +01:00
Tobias Geerinckx-Rice
122396075f
services: cups: Update default timeouts. 
Upstream raised these back in 2019 with CUPS 2.3.0.

* gnu/services/cups.scm (<cups-configuration>): Raise default
‘multiple-operation-timeout’ and ‘timeout’ from 300 to 900 seconds.
* doc/guix.texi (Printing Services): Adjust accordingly.
 2021-11-16 01:15:04 +01:00
Christopher Baines
db5907138c
gnu: guix-build-coordinator: Update to 0-37.200ffe7. 
* gnu/packages/package-management.scm (guix-build-coordinator): Update to
0-37.200ffe7.
 2021-11-15 21:49:21 +00:00
Jelle Licht
63915955e2
gnu: libuv-for-node: Update to 1.42.0. 
* gnu/packages/libevent.scm (libuv-for-node): Update to 1.42.0.
 2021-11-15 22:43:24 +01:00
Jelle Licht
f3cd70ff8c
gnu: node-lts: Update to 14.18.1 [security fixes]. 
* gnu/packages/node.scm (node-lts): Update to 14.18.1.
[native-inputs]: Replace c-ares with c-ares-for-node.
[inputs]: Replace c-ares with c-ares-for-node.

Includes fixes for CVE-2021-22918, CVE-2021-22930, CVE-2021-22931,
CVE-2021-22939, and CVE-2021-22940.
 2021-11-15 22:43:24 +01:00
Jelle Licht
cae7c3f389
gnu: llhttp-bootstrap: Update to 2.1.4 [security-fixes]. 
* gnu/packages/node.scm (llhttp-bootstrap): Update to 2.1.4.

Includes fixes for CVE-2021-22959 and CVE-2021-22960.
 2021-11-15 22:43:23 +01:00
Jelle Licht
ecbf59abad
gnu: Add c-ares-for-node. 
* gnu/packages/adns.scm (c-ares-for-node): New variable.

Co-authored-by: Marius Bakke <marius@gnu.org>
 2021-11-15 22:43:23 +01:00
Jelle Licht
a69076e792
gnu: node: Add cpe-name. 
* gnu/packages/node.scm (node)[properties]: Add cpe-name.
 2021-11-15 22:43:23 +01:00
Lenny Händler
847f2ae859
gnu: taskwarrior: Update to 2.6.1. 
* gnu/packages/task-management.scm (taskwarrior): Update to 2.6.1.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-11-15 22:26:50 +01:00
Nicolas Goaziou
ae14076578
gnu: emacs-helm: Update to 3.8.1. 
* gnu/packages/emacs-xyz.scm (emacs-helm): Update to 3.8.1.
 2021-11-15 21:43:39 +01:00