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73485 Commits

Author SHA1 Message Date
Ricardo Wurmus
3d111f1430
gnu: Add r-zonebuilder. 
* gnu/packages/cran.scm (r-zonebuilder): New variable.
 2021-08-26 11:45:24 +02:00
Ricardo Wurmus
5e3199e37b
gnu: Add r-zooarch. 
* gnu/packages/cran.scm (r-zooarch): New variable.
 2021-08-26 11:45:15 +02:00
Ricardo Wurmus
1c8a0dbcaf
gnu: r-dismo: Remove commented input. 
* gnu/packages/cran.scm (r-dismo)[inputs]: Remove commented "java" input.
 2021-08-26 11:34:26 +02:00
Ricardo Wurmus
1c4b1a1f49
gnu: Add r-zooimage. 
* gnu/packages/cran.scm (r-zooimage): New variable.
 2021-08-26 11:25:22 +02:00
Ricardo Wurmus
9d56788e1c
gnu: Add r-mlearning. 
* gnu/packages/cran.scm (r-mlearning): New variable.
 2021-08-26 11:25:22 +02:00
Ricardo Wurmus
b28a60c02c
gnu: Add r-filehash. 
* gnu/packages/cran.scm (r-filehash): New variable.
 2021-08-26 11:25:22 +02:00
Ricardo Wurmus
738a48adb1
gnu: Add r-zoolog. 
* gnu/packages/cran.scm (r-zoolog): New variable.
 2021-08-26 11:25:22 +02:00
Ricardo Wurmus
7986f5cb3d
gnu: Add r-zoom. 
* gnu/packages/cran.scm (r-zoom): New variable.
 2021-08-26 11:25:22 +02:00
Ricardo Wurmus
7bc1b5a23d
gnu: Add r-zoomgroupstats. 
* gnu/packages/cran.scm (r-zoomgroupstats): New variable.
 2021-08-26 11:25:22 +02:00
Ricardo Wurmus
870fb5dc22
gnu: Add r-paws. 
* gnu/packages/cran.scm (r-paws): New variable.
 2021-08-26 11:25:22 +02:00
Ricardo Wurmus
499ffd579e
gnu: Add r-paws-compute. 
* gnu/packages/cran.scm (r-paws-compute): New variable.
 2021-08-26 11:25:22 +02:00
Ricardo Wurmus
c6849d2ca2
gnu: Add r-paws-storage. 
* gnu/packages/cran.scm (r-paws-storage): New variable.
 2021-08-26 11:25:21 +02:00
Ricardo Wurmus
b28cfb83e4
gnu: Add r-paws-database. 
* gnu/packages/cran.scm (r-paws-database): New variable.
 2021-08-26 11:25:21 +02:00
Ricardo Wurmus
478a889925
gnu: Add r-paws-networking. 
* gnu/packages/cran.scm (r-paws-networking): New variable.
 2021-08-26 11:25:21 +02:00
Ricardo Wurmus
16cc95c4e9
gnu: Add r-paws-management. 
* gnu/packages/cran.scm (r-paws-management): New variable.
 2021-08-26 11:25:21 +02:00
Ricardo Wurmus
322290ba13
gnu: Add r-paws-machine-learning. 
* gnu/packages/cran.scm (r-paws-machine-learning): New variable.
 2021-08-26 11:25:21 +02:00
Ricardo Wurmus
c7b913a535
gnu: Add r-paws-analytics. 
* gnu/packages/cran.scm (r-paws-analytics): New variable.
 2021-08-26 11:25:21 +02:00
Ricardo Wurmus
10139557f0
gnu: Add r-paws-security-identity. 
* gnu/packages/cran.scm (r-paws-security-identity): New variable.
 2021-08-26 11:25:21 +02:00
Ricardo Wurmus
6850d222e6
gnu: Add r-paws-application-integration. 
* gnu/packages/cran.scm (r-paws-application-integration): New variable.
 2021-08-26 11:25:21 +02:00
Ricardo Wurmus
a30b1ff444
gnu: Add r-paws-cost-management. 
* gnu/packages/cran.scm (r-paws-cost-management): New variable.
 2021-08-26 11:25:21 +02:00
Ricardo Wurmus
e1f7b3e8f9
gnu: Add r-paws-customer-engagement. 
* gnu/packages/cran.scm (r-paws-customer-engagement): New variable.
 2021-08-26 11:25:21 +02:00
Ricardo Wurmus
add144a0c4
gnu: Add r-paws-common. 
* gnu/packages/cran.scm (r-paws-common): New variable.
 2021-08-26 11:25:21 +02:00
Ricardo Wurmus
26cc1eafe7
gnu: Add r-zoon. 
* gnu/packages/cran.scm (r-zoon): New variable.
 2021-08-26 11:25:21 +02:00
Ricardo Wurmus
8b00e70558
gnu: Add r-dismo. 
* gnu/packages/cran.scm (r-dismo): New variable.
 2021-08-26 11:25:21 +02:00
Ricardo Wurmus
f8c88560db
gnu: Add r-rfigshare. 
* gnu/packages/cran.scm (r-rfigshare): New variable.
 2021-08-26 11:25:21 +02:00
Ricardo Wurmus
2f00425b4e
gnu: Add r-zra. 
* gnu/packages/cran.scm (r-zra): New variable.
 2021-08-26 11:25:21 +02:00
Ricardo Wurmus
fac893fa7f
gnu: Add r-zscorer. 
* gnu/packages/cran.scm (r-zscorer): New variable.
 2021-08-26 11:25:20 +02:00
Ricardo Wurmus
9f120e9150
gnu: Add r-ztpln. 
* gnu/packages/cran.scm (r-ztpln): New variable.
 2021-08-26 11:25:20 +02:00
Ricardo Wurmus
ed531c6cd9
gnu: Add r-distributionutils. 
* gnu/packages/cran.scm (r-distributionutils): New variable.
 2021-08-26 11:25:20 +02:00
Ricardo Wurmus
f4cb9563a3
gnu: Add r-ztree. 
* gnu/packages/cran.scm (r-ztree): New variable.
 2021-08-26 11:25:20 +02:00
Ricardo Wurmus
e5f360aa97
gnu: Add r-zzlite. 
* gnu/packages/cran.scm (r-zzlite): New variable.
 2021-08-26 11:25:20 +02:00
Nicolas Goaziou
c410001d21
gnu: wireshark: Update to 3.4.8. 
* gnu/packages/networking.scm (wireshark): Update to 3.4.8.
 2021-08-26 10:36:02 +02:00
Nicolas Goaziou
9483d10494
gnu: emacs-orgit: Update to 1.7.1. 
* gnu/packages/emacs-xyz.scm (emacs-orgit): Update to 1.7.1.
 2021-08-26 10:30:09 +02:00
Nicolas Goaziou
7ef00db933
gnu: emacs-moody: Update to 0.6.0. 
* gnu/packages/emacs-xyz.scm (emacs-moody): Update to 0.6.0.
 2021-08-26 10:28:55 +02:00
Nicolas Goaziou
71521c341f
gnu: emacs-keycast: Update to 1.1.1. 
* gnu/packages/emacs-xyz.scm (emacs-keycast): Update to 1.1.1.
 2021-08-26 10:27:50 +02:00
Nicolas Goaziou
f0b0d67341
gnu: emacs-htmlize: Update to 1.56. 
* gnu/packages/emacs-xyz.scm (emacs-htmlize): Update to 1.56.
 2021-08-26 10:26:42 +02:00
Nicolas Goaziou
e645194d80
gnu: emacs-envrc: Update to 0.4. 
* gnu/packages/emacs-xyz.scm (emacs-envrc): Update to 0.4.
[propagated-inputs]: Add emacs-inheritenv.
 2021-08-26 10:25:28 +02:00
Nicolas Goaziou
29b3c0898f
gnu: Add emacs-inheritenv. 
* gnu/packages/emacs-xyz.scm (emacs-inheritenv): New variable.
 2021-08-26 10:25:15 +02:00
Nicolas Goaziou
20ca345899
gnu: emacs-ebdb: Update to 0.8.2. 
* gnu/packages/emacs-xyz.scm (emacs-ebdb): Update to 0.8.2.
 2021-08-26 10:13:45 +02:00
Andrew Whatson
26878cb3d8
gnu: osinfo-db: Update to 20210809. 
Fixes failures when attempting to download some images in gnome-boxes.

* gnu/packages/virtualization.scm (osinfo-db): Update to 20210809.
 2021-08-25 22:00:08 +02:00
Simon South
49339d2e68
gnu: knot-resolver: Update to 5.4.1. 
* gnu/packages/dns.scm (knot-resolver): Update to 5.4.1.
 2021-08-25 21:54:47 +02:00
Marius Bakke
08660f7c88
gnu: ungoogled-chromium: Update to 92.0.4515.159-0.8164c91. 
* gnu/packages/chromium.scm (%chromium-version): Set to 92.0.4515.159.
(%ungoogled-revision): Set to 92.0.4515.159-1-8-g8164c91.
(%ungoogled-origin, ungoogled-chromium): Update hashes.
 2021-08-25 21:10:23 +02:00
Ricardo Wurmus
2f16659b40
gnu: Add r-ballgown. 
* gnu/packages/bioconductor.scm (r-ballgown): New variable.
 2021-08-25 12:30:33 +02:00
Ricardo Wurmus
f66759e0b2
gnu: Add ivar. 
* gnu/packages/bioinformatics.scm (ivar): New variable.
 2021-08-25 11:22:02 +02:00
Leo Famulari
ae3e6ba506
gnu: atop: Update to 2.6.0. 
* gnu/packages/admin.scm (atop): Update to 2.6.0.
 2021-07-27 12:34:57 -04:00
Efraim Flashner
5422920b9e
gnu: openssl: Update replacement to 1.1.1l [security fixes]. 
* gnu/packages/tls.scm (openssl)[replacement]: Replace with 1.1.1l.
(openssl-1.1.1k): Remove variable.
(openssl-1.1.1l): Add variable.
 2021-08-24 22:36:39 +03:00
Ricardo Wurmus
68b22a8541
gnu: r-delayedmatrixstats: Update to 1.14.2. 
* gnu/packages/bioconductor.scm (r-delayedmatrixstats): Update to 1.14.2.
 2021-08-24 12:28:13 +02:00
Ricardo Wurmus
26d6db11f0
gnu: r-sparsematrixstats: Update to 1.4.2. 
* gnu/packages/bioconductor.scm (r-sparsematrixstats): Update to 1.4.2.
 2021-08-24 12:28:13 +02:00
Ricardo Wurmus
b2316605e2
gnu: r-scuttle: Update to 1.2.1. 
* gnu/packages/bioconductor.scm (r-scuttle): Update to 1.2.1.
 2021-08-24 12:28:13 +02:00
Ricardo Wurmus
2897ad3178
gnu: r-beachmat: Update to 2.8.1. 
* gnu/packages/bioconductor.scm (r-beachmat): Update to 2.8.1.
 2021-08-24 12:28:13 +02:00
Ricardo Wurmus
da7e7c9de8
gnu: r-biocset: Update to 1.6.1. 
* gnu/packages/bioconductor.scm (r-biocset): Update to 1.6.1.
 2021-08-24 12:28:13 +02:00
Ricardo Wurmus
9ff9a4756d
gnu: r-universalmotif: Update to 1.10.2. 
* gnu/packages/bioconductor.scm (r-universalmotif): Update to 1.10.2.
 2021-08-24 12:28:13 +02:00
Ricardo Wurmus
0022f40462
gnu: r-clusterprofiler: Update to 4.0.4. 
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 4.0.4.
 2021-08-24 12:28:13 +02:00
Ricardo Wurmus
5543456ae9
gnu: r-dose: Update to 3.18.2. 
* gnu/packages/bioconductor.scm (r-dose): Update to 3.18.2.
 2021-08-24 12:28:13 +02:00
Ricardo Wurmus
1c23b99a3c
gnu: r-batchelor: Update to 1.8.1. 
* gnu/packages/bioconductor.scm (r-batchelor): Update to 1.8.1.
 2021-08-24 12:28:12 +02:00
Ricardo Wurmus
82d6774757
gnu: r-ggtree: Update to 3.0.3. 
* gnu/packages/bioconductor.scm (r-ggtree): Update to 3.0.3.
 2021-08-24 12:28:12 +02:00
Ricardo Wurmus
e4ad91eb3e
gnu: r-treeio: Update to 1.16.2. 
* gnu/packages/bioconductor.scm (r-treeio): Update to 1.16.2.
 2021-08-24 12:28:12 +02:00
Ricardo Wurmus
917f0def66
gnu: r-matrixgenerics: Update to 1.4.2. 
* gnu/packages/bioconductor.scm (r-matrixgenerics): Update to 1.4.2.
 2021-08-24 12:28:12 +02:00
Ricardo Wurmus
3ef4c12a49
gnu: r-chippeakanno: Update to 3.26.3. 
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.26.3.
 2021-08-24 12:28:12 +02:00
Ricardo Wurmus
33fedd371a
gnu: r-diffbind: Update to 3.2.5. 
* gnu/packages/bioconductor.scm (r-diffbind): Update to 3.2.5.
 2021-08-24 12:28:12 +02:00
Ricardo Wurmus
514454cc8f
gnu: r-structuralvariantannotation: Update to 1.8.2. 
* gnu/packages/bioconductor.scm (r-structuralvariantannotation): Update to 1.8.2.
[propagated-inputs]: Add r-genomeinfodb, r-iranges, r-s4vectors, and
r-summarizedexperiment.
 2021-08-24 12:28:12 +02:00
Ricardo Wurmus
1920e567a7
gnu: r-rtracklayer: Update to 1.52.1. 
* gnu/packages/bioconductor.scm (r-rtracklayer): Update to 1.52.1.
 2021-08-24 12:28:12 +02:00
Ricardo Wurmus
495c50c68d
gnu: r-limma: Update to 3.48.3. 
* gnu/packages/bioconductor.scm (r-limma): Update to 3.48.3.
 2021-08-24 12:28:12 +02:00
Ricardo Wurmus
3277c4e749
gnu: r-genomicfeatures: Update to 1.44.1. 
* gnu/packages/bioconductor.scm (r-genomicfeatures): Update to 1.44.1.
 2021-08-24 12:28:12 +02:00
Ricardo Wurmus
8df84bedf7
gnu: r-ensembldb: Update to 2.16.4. 
* gnu/packages/bioconductor.scm (r-ensembldb): Update to 2.16.4.
 2021-08-24 12:28:12 +02:00
Ricardo Wurmus
e46cf457bb
gnu: r-biostrings: Update to 2.60.2. 
* gnu/packages/bioconductor.scm (r-biostrings): Update to 2.60.2.
 2021-08-24 12:28:12 +02:00
Ricardo Wurmus
227579e84a
gnu: r-biomart: Update to 2.48.3. 
* gnu/packages/bioconductor.scm (r-biomart): Update to 2.48.3.
 2021-08-24 12:28:12 +02:00
Ricardo Wurmus
2a775745d7
gnu: r-xml: Update to 3.99-0.7. 
* gnu/packages/statistics.scm (r-xml): Update to 3.99-0.7.
 2021-08-24 12:28:12 +02:00
Ricardo Wurmus
871c81d0e6
gnu: r-rsqlite: Update to 2.2.8. 
* gnu/packages/statistics.scm (r-rsqlite): Update to 2.2.8.
 2021-08-24 12:28:12 +02:00
Ricardo Wurmus
e626540d41
gnu: r-rmarkdown: Update to 2.10. 
* gnu/packages/statistics.scm (r-rmarkdown): Update to 2.10.
 2021-08-24 12:28:12 +02:00
Ricardo Wurmus
5b7813fd09
gnu: r-readr: Update to 2.0.1. 
* gnu/packages/statistics.scm (r-readr): Update to 2.0.1.
 2021-08-24 12:28:11 +02:00
Ricardo Wurmus
ccdcb67353
gnu: r-r6: Update to 2.5.1. 
* gnu/packages/statistics.scm (r-r6): Update to 2.5.1.
 2021-08-24 12:28:11 +02:00
Ricardo Wurmus
54b95b640d
gnu: r-survival: Update to 3.2-12. 
* gnu/packages/statistics.scm (r-survival): Update to 3.2-12.
 2021-08-24 12:28:11 +02:00
Ricardo Wurmus
4f5328854f
gnu: r-keras: Update to 2.6.0. 
* gnu/packages/cran.scm (r-keras): Update to 2.6.0.
[propagated-inputs]: Add r-ellipsis and r-glue.
 2021-08-24 12:28:11 +02:00
Ricardo Wurmus
33317ba722
gnu: r-tensorflow: Update to 2.6.0. 
* gnu/packages/cran.scm (r-tensorflow): Update to 2.6.0.
[propagated-inputs]: Remove r-jsonlite; add r-tfautograph.
 2021-08-24 12:28:11 +02:00
Ricardo Wurmus
ed7d8e74e4
gnu: r-opencpu: Update to 2.2.5. 
* gnu/packages/cran.scm (r-opencpu): Update to 2.2.5.
 2021-08-24 12:28:11 +02:00
Ricardo Wurmus
224cb006f6
gnu: r-vroom: Update to 1.5.4. 
* gnu/packages/cran.scm (r-vroom): Update to 1.5.4.
 2021-08-24 12:28:11 +02:00
Ricardo Wurmus
18a887b767
gnu: r-textplot: Update to 0.2.0. 
* gnu/packages/cran.scm (r-textplot): Update to 0.2.0.
 2021-08-24 12:28:11 +02:00
Ricardo Wurmus
36a506586b
gnu: r-rjsonio: Update to 1.3-1.5. 
* gnu/packages/cran.scm (r-rjsonio): Update to 1.3-1.5.
 2021-08-24 12:28:11 +02:00
Ricardo Wurmus
5f95575b84
gnu: r-english: Update to 1.2-6. 
* gnu/packages/cran.scm (r-english): Update to 1.2-6.
 2021-08-24 12:28:11 +02:00
Ricardo Wurmus
1df8915a03
gnu: r-mlr3learners: Update to 0.5.0. 
* gnu/packages/cran.scm (r-mlr3learners): Update to 0.5.0.
[propagated-inputs]: Add r-checkmate.
 2021-08-24 12:28:11 +02:00
Ricardo Wurmus
f6e76ab262
gnu: r-mlr3: Update to 0.12.0. 
* gnu/packages/cran.scm (r-mlr3): Update to 0.12.0.
[propagated-inputs]: Remove r-digest; add r-future.
 2021-08-24 12:28:11 +02:00
Ricardo Wurmus
7dae9355fd
gnu: r-seurat: Update to 4.0.4. 
* gnu/packages/cran.scm (r-seurat): Update to 4.0.4.
 2021-08-24 12:28:11 +02:00
Ricardo Wurmus
0887bff472
gnu: r-infer: Update to 1.0.0. 
* gnu/packages/cran.scm (r-infer): Update to 1.0.0.
[propagated-inputs]: Add r-broom, r-generics, r-patchwork, and r-tidyr.
 2021-08-24 12:28:11 +02:00
Ricardo Wurmus
59bc5db72e
gnu: r-scatterpie: Update to 0.1.7. 
* gnu/packages/cran.scm (r-scatterpie): Update to 0.1.7.
[propagated-inputs]: Remove r-rvcheck; add r-ggfun.
 2021-08-24 12:28:11 +02:00
Ricardo Wurmus
d8cd4468e4
gnu: r-brms: Update to 2.16.0. 
* gnu/packages/cran.scm (r-brms): Update to 2.16.0.
[propagated-inputs]: Add r-posterior.
 2021-08-24 12:28:11 +02:00
Ricardo Wurmus
8a2f102fb4
gnu: r-rxnat: Update to 1.0.15. 
* gnu/packages/cran.scm (r-rxnat): Update to 1.0.15.
[propagated-inputs]: Remove r-dplyr.
 2021-08-24 12:28:10 +02:00
Ricardo Wurmus
9480d44b40
gnu: r-rlinsolve: Update to 0.3.2. 
* gnu/packages/cran.scm (r-rlinsolve): Update to 0.3.2.
 2021-08-24 12:28:10 +02:00
Ricardo Wurmus
01bcea4dcb
gnu: r-rsconnect: Update to 0.8.24. 
* gnu/packages/cran.scm (r-rsconnect): Update to 0.8.24.
 2021-08-24 12:28:10 +02:00
Ricardo Wurmus
50e345f1b1
gnu: r-packrat: Update to 0.7.0. 
* gnu/packages/cran.scm (r-packrat): Update to 0.7.0.
 2021-08-24 12:28:10 +02:00
Ricardo Wurmus
8804fe4f65
gnu: r-rpf: Update to 1.0.8. 
* gnu/packages/cran.scm (r-rpf): Update to 1.0.8.
 2021-08-24 12:28:10 +02:00
Ricardo Wurmus
33df0e388e
gnu: r-quanteda: Update to 3.1.0. 
* gnu/packages/cran.scm (r-quanteda): Update to 3.1.0.
 2021-08-24 12:28:10 +02:00
Ricardo Wurmus
b4b3ffb09e
gnu: r-tree: Update to 1.0-41. 
* gnu/packages/cran.scm (r-tree): Update to 1.0-41.
 2021-08-24 12:28:10 +02:00
Ricardo Wurmus
0ed48e1314
gnu: r-showtext: Update to 0.9-4. 
* gnu/packages/cran.scm (r-showtext): Update to 0.9-4.
 2021-08-24 12:28:10 +02:00
Ricardo Wurmus
a6ffecaf7b
gnu: r-sysfonts: Update to 0.8.5. 
* gnu/packages/cran.scm (r-sysfonts): Update to 0.8.5.
 2021-08-24 12:28:10 +02:00
Ricardo Wurmus
6b4e6deea6
gnu: r-terra: Update to 1.3-22. 
* gnu/packages/cran.scm (r-terra): Update to 1.3-22.
 2021-08-24 12:28:10 +02:00
Ricardo Wurmus
de3e5506da
gnu: r-dae: Update to 3.2-10. 
* gnu/packages/cran.scm (r-dae): Update to 3.2-10.
 2021-08-24 12:28:10 +02:00
Ricardo Wurmus
ae71a35b9b
gnu: r-ggplotify: Update to 0.0.9. 
* gnu/packages/cran.scm (r-ggplotify): Update to 0.0.9.
[propagated-inputs]: Remove r-rvcheck; add r-yulab-utils.
 2021-08-24 12:28:10 +02:00
Ricardo Wurmus
586c5df062
gnu: r-bookdown: Update to 0.23. 
* gnu/packages/cran.scm (r-bookdown): Update to 0.23.
[propagated-inputs]: Add r-jquerylib.
 2021-08-24 12:28:10 +02:00
Ricardo Wurmus
58a8e675ee
gnu: r-future-apply: Update to 1.8.1. 
* gnu/packages/cran.scm (r-future-apply): Update to 1.8.1.
 2021-08-24 12:28:10 +02:00
Ricardo Wurmus
4a7b76a62b
gnu: r-bigrquery: Update to 1.4.0. 
* gnu/packages/cran.scm (r-bigrquery): Update to 1.4.0.
[propagated-inputs]: Add r-lifecycle.
 2021-08-24 12:28:10 +02:00
Ricardo Wurmus
22f83fb615
gnu: r-rgl: Update to 0.107.14. 
* gnu/packages/cran.scm (r-rgl): Update to 0.107.14.
 2021-08-24 12:28:09 +02:00
Ricardo Wurmus
a618f77c95
gnu: r-gert: Update to 1.3.2. 
* gnu/packages/cran.scm (r-gert): Update to 1.3.2.
 2021-08-24 12:28:09 +02:00
Ricardo Wurmus
bc81012532
gnu: r-emmeans: Update to 1.6.3. 
* gnu/packages/cran.scm (r-emmeans): Update to 1.6.3.
 2021-08-24 12:28:09 +02:00
Ricardo Wurmus
bd7a0667bf
gnu: r-magick: Update to 2.7.3. 
* gnu/packages/cran.scm (r-magick): Update to 2.7.3.
 2021-08-24 12:28:09 +02:00
Ricardo Wurmus
16bb0355f2
gnu: r-argparse: Update to 2.0.4. 
* gnu/packages/cran.scm (r-argparse): Update to 2.0.4.
 2021-08-24 12:28:09 +02:00
Ricardo Wurmus
46439f6d65
gnu: r-insight: Update to 0.14.3. 
* gnu/packages/cran.scm (r-insight): Update to 0.14.3.
 2021-08-24 12:28:09 +02:00
Ricardo Wurmus
741f619982
gnu: r-rbibutils: Update to 2.2.3. 
* gnu/packages/cran.scm (r-rbibutils): Update to 2.2.3.
 2021-08-24 12:28:09 +02:00
Ricardo Wurmus
c34dd257ee
gnu: r-rgexf: Update to 0.16.2. 
* gnu/packages/cran.scm (r-rgexf): Update to 0.16.2.
[source]: Simplify snippet.
[arguments]: Remove trailing #t.
 2021-08-24 12:28:09 +02:00
Ricardo Wurmus
5c35a92d4b
gnu: r-later: Update to 1.3.0. 
* gnu/packages/cran.scm (r-later): Update to 1.3.0.
 2021-08-24 12:28:09 +02:00
Ricardo Wurmus
1b85d11650
gnu: r-tinytex: Update to 0.33. 
* gnu/packages/cran.scm (r-tinytex): Update to 0.33.
 2021-08-24 12:28:09 +02:00
Ricardo Wurmus
b7d47d7715
gnu: r-xfun: Update to 0.25. 
* gnu/packages/cran.scm (r-xfun): Update to 0.25.
 2021-08-24 12:28:09 +02:00
Ricardo Wurmus
442a26491b
gnu: r-bbmle: Update to 1.0.24. 
* gnu/packages/cran.scm (r-bbmle): Update to 1.0.24.
[native-inputs]: Add r-knitr.
 2021-08-24 12:28:09 +02:00
Ricardo Wurmus
630491f535
gnu: r-d3r: Update to 1.0.0. 
* gnu/packages/cran.scm (r-d3r): Update to 1.0.0.
[arguments]: Also replace d3.v7.js.
[native-inputs]: Add d3.v7.js.
 2021-08-24 12:28:09 +02:00
Ricardo Wurmus
d390bf650b
gnu: r-servr: Update to 0.23. 
* gnu/packages/cran.scm (r-servr): Update to 0.23.
 2021-08-24 12:28:09 +02:00
Ricardo Wurmus
ee5fc0a241
gnu: r-httpuv: Update to 1.6.2. 
* gnu/packages/cran.scm (r-httpuv): Update to 1.6.2.
[inputs]: Add zlib.
 2021-08-24 12:28:09 +02:00
Ricardo Wurmus
7285c1db53
gnu: r-reprex: Update to 2.0.1. 
* gnu/packages/cran.scm (r-reprex): Update to 2.0.1.
 2021-08-24 12:28:08 +02:00
Ricardo Wurmus
1eee39454b
gnu: r-ggpmisc: Update to 0.4.2-1. 
* gnu/packages/cran.scm (r-ggpmisc): Update to 0.4.2-1.
 2021-08-24 12:28:08 +02:00
Ricardo Wurmus
1a54a0b975
gnu: r-datawizard: Update to 0.2.0. 
* gnu/packages/cran.scm (r-datawizard): Update to 0.2.0.
[native-inputs]: Add r-knitr.
 2021-08-24 12:28:08 +02:00
Ricardo Wurmus
10b152ae15
gnu: r-cachem: Update to 1.0.6. 
* gnu/packages/cran.scm (r-cachem): Update to 1.0.6.
 2021-08-24 12:28:08 +02:00
Ricardo Wurmus
dc18d10cbc
gnu: Add r-tfautograph. 
* gnu/packages/cran.scm (r-tfautograph): New variable.
 2021-08-24 12:28:08 +02:00
Ricardo Wurmus
8239f1f8cf
gnu: Add r-posterior. 
* gnu/packages/cran.scm (r-posterior): New variable.
 2021-08-24 12:28:08 +02:00
Ricardo Wurmus
6ff48c64f1
gnu: Add r-distributional. 
* gnu/packages/cran.scm (r-distributional): New variable.
 2021-08-24 12:28:08 +02:00
Ricardo Wurmus
ffe8484d9d
gnu: Add r-ggfun. 
* gnu/packages/cran.scm (r-ggfun): New variable.
 2021-08-24 12:28:08 +02:00
Ricardo Wurmus
cabaa73f70
gnu: Add r-yulab-utils. 
* gnu/packages/cran.scm (r-yulab-utils): New variable.
 2021-08-24 12:28:08 +02:00
Ricardo Wurmus
14c3871720
gnu: r-with-tests: Update to 4.1.1. 
* gnu/packages/statistics.scm (r-with-tests): Update to 4.1.1.
 2021-08-24 12:28:04 +02:00
Nicolas Goaziou
5552104cd2
gnu: emacs-olivetti: Update to 2.0.2. 
* gnu/packages/emacs-xyz.scm (emacs-olivetti): Update to 2.0.2.
 2021-08-24 11:14:27 +02:00
Nicolas Goaziou
1a5c3f1af3
gnu: emacs-org-ref: Update to 2.0.0. 
* gnu/packages/emacs-xyz.scm (emacs-org-ref): Update to 2.0.0.
 2021-08-24 11:10:47 +02:00
Nicolas Goaziou
f04883d0ba
gnu: bat: Update to 0.18.3. 
* gnu/packages/rust-apps.scm (bat): Update to 0.18.3.
 2021-08-23 15:13:52 +02:00
Paul Garlick
d6c2fc3729
gnu: python-pygmsh: Update to 7.1.11. 
*gnu/packages/simulation.scm (python-pygmsh): Update to 7.1.11.
[source](snippet): Re-phrase comment.
 2021-08-23 12:39:43 +01:00
Nicolas Goaziou
efde98a443
gnu: emacs-elfeed-score: Update to 0.8.4. 
* gnu/packages/emacs-xyz.scm (emacs-elfeed-score): Update to 0.8.4.
 2021-08-23 08:55:58 +02:00
Nicolas Goaziou
0d3cf065ec
gnu: emacs-org-appear: Update to 0.2.4. 
* gnu/packages/emacs-xyz.scm (emacs-org-appear): Update to 0.2.4.
 2021-08-23 08:54:37 +02:00
Nicolas Goaziou
9adb69b089
gnu: python-duniterpy: Update to 1.0.0. 
* gnu/packages/finance.scm (python-duniterpy): Update to 1.0.0.
 2021-08-22 21:06:39 +02:00
Brice Waegeneire
9e3b68203c
gnu: openssh: Update to 8.7p1. 
* gnu/packages/ssh.scm (openssh): Update to 8.7p1.
 2021-08-22 09:24:33 +02:00
Pierre Langlois
847dfcdc29
gnu: mu: Update to 1.6.3. 
* gnu/packages/mail.scm (mu): Update to 1.6.3.
 2021-08-21 11:00:48 +01:00
Nicolas Goaziou
ac9fd0629b
gnu: emacs-undo-tree: Update to 0.8.1. 
* gnu/packages/emacs-xyz.scm (emacs-undo-tree): Update to 0.8.1.
[source]: Switch from GNU ELPA to Gitlab repository.
[propagated-inputs]: Add emacs-queue.
 2021-08-21 09:33:14 +02:00
Nicolas Goaziou
a328c4a6a9
gnu: emacs-org-roam: Update to 2.1.0. 
* gnu/packages/emacs-xyz.scm (emacs-org-roam): Update to 2.1.0.
 2021-08-21 09:27:11 +02:00
Nicolas Goaziou
ce2fd09ea6
gnu: emacs-org-mime: Update to 0.2.2. 
* gnu/packages/emacs-xyz.scm (emacs-org-mime): Update to 0.2.2.
 2021-08-21 09:25:15 +02:00
Nicolas Goaziou
de3cc38adf
gnu: emacs-elfeed-score: Update to 0.8.3. 
* gnu/packages/emacs-xyz.scm (emacs-elfeed-score): Update to 0.8.3.
 2021-08-21 09:23:08 +02:00
Nicolas Goaziou
15ba093ce3
gnu: emacs-ebdb: Update to 0.8.1. 
* gnu/packages/emacs-xyz.scm (emacs-ebdb): Update to 0.8.1.
 2021-08-21 09:20:35 +02:00
Maxime Devos
d548fa9144
gnu: appstream-glib: Fix failing tests. 
* gnu/packages/glib.scm (appstream-glib)[arguments]<#:phases>{set-home}: Add a
new phase 'set-home' for tests that want to write to $HOME.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2021-07-27 12:34:57 -04:00
pukkamustard
6d9d10ae3f
gnu: ocaml4.07-base: Remove unnecessary arguments. 
* gnu/packages/ocaml.scm (ocaml4.07-base): Remove unnecessary arguments.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2021-08-20 23:51:20 +02:00
pukkamustard
33a1ec29fa
guix: dune-build-system: Add a profile parameter. 
* guix/build-system/dune.scm: Add a profile parameter.
* guix/build/dune-build-system.scm (build): Use it.
* doc/guix.texi: Document it.
* gnu/packages/ocaml.scm: Remove profile being set from build flags.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2021-08-20 23:51:11 +02:00
Julien Lepiller
777ce14857
gnu: ocaml-dune: Update to 2.9.0. 
* gnu/packages/ocaml.scm (dune): Update to 2.9.0.
 2021-08-20 23:48:45 +02:00
Julien Lepiller
3d3807a022
gnu: opam: Update to 2.1.0. 
* gnu/packages/ocaml.scm (opam): Update to 2.1.0.
 2021-08-20 23:48:20 +02:00
Julien Lepiller
43c0be8c6a
gnu: ocaml-opam-file-format: Update to 2.1.3. 
* gnu/packages/ocaml.scm (ocaml-opam-file-format): Update to 2.1.3.
 2021-08-20 23:44:26 +02:00
Julien Lepiller
f916c82709
gnu: ocaml-markup: Update to 1.0.2. 
* gnu/packages/ocaml.scm (ocaml-markup): Update to 1.0.2.
 2021-08-20 23:43:22 +02:00
Leo Famulari
903b68cac5
gnu: GnuPG: Update to 2.2.29. 
* gnu/packages/gnupg.scm (gnupg): Update to 2.22.9.
 2021-07-27 12:34:57 -04:00
Leo Prikler
b7d1698f7f
gnu: minetest: move to minetest.scm. 
* gnu/packages/games.scm (minetest, minetest-data): Move from here...
* gnu/packages/minetest.scm (minetest, minetest-data): ... to here.
* guix/build-system/minetest.scm (default-minetest): Adjust accordingly.
 2021-08-20 13:37:32 +02:00
Leo Prikler
cd8df9aab2
gnu: minetest-mineclone: move to minetest.scm. 
* gnu/packages/games.scm (minetest-mineclone): Move from here...
* gnu/packages/minetest.scm (minetest-mineclone): ... to here.
 2021-08-20 12:45:56 +02:00
Maxime Devos
10fc3e37c6
gnu: Add minetest-homedecor-modpack. 
* gnu/packages/minetest.scm
  (minetest-homedecor-modpack): New variable.

Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
 2021-08-20 12:41:56 +02:00
Maxime Devos
948677b67e
gnu: Add minetest-mobs-animal. 
* gnu/packages/minetest.scm (minetest-mobs-animal): New variable.

Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
 2021-08-20 12:41:56 +02:00
Maxime Devos
03685ea2c2
gnu: Add minetest-mobs. 
* gnu/packages/minetest.scm (minetest-mobs): New variable.

Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
 2021-08-20 12:41:56 +02:00
Maxime Devos
958e7c851a
gnu: Add minetest-worldedit. 
* gnu/packages/minetest.scm (minetest-worldedit): New variable.

Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
 2021-08-20 12:41:56 +02:00
Maxime Devos
5e9aeab2f8
gnu: Add minetest-unified-inventory. 
* gnu/packages/minetest.scm
  (minetest-unified-inventory): New variable.

Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
 2021-08-20 12:41:56 +02:00
Maxime Devos
41f5f99b12
gnu: Add minetest-throwing-arrows. 
* gnu/packages/minetest.scm
  (minetest-throwing-arrows): New variable.

Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
 2021-08-20 12:41:56 +02:00
Maxime Devos
01c6973296
gnu: Add minetest-throwing. 
* gnu/packages/minetest.scm (minetest-throwing): New variable.

Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
 2021-08-20 12:41:55 +02:00
Maxime Devos
7479d8425c
gnu: Add minetest-technic. 
* gnu/packages/minetest.scm (minetest-technic): New variable.

Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
 2021-08-20 12:41:55 +02:00
Maxime Devos
facd787c2c
gnu: Add minetest-ethereal. 
* gnu/packages/minetest.scm (minetest-ethereal): New variable.

Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
 2021-08-20 12:41:55 +02:00
Maxime Devos
680131246f
gnu: Add minetest-coloredwood. 
* gnu/packages/minetest.scm (minetest-coloredwood): New variable.

Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
 2021-08-20 12:41:55 +02:00
Maxime Devos
4535a187cc
gnu: Add minetest-pipeworks. 
* gnu/packages/minetest.scm (minetest-pipeworks): New variable.

Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
 2021-08-20 12:41:55 +02:00
Maxime Devos
46a28e01b4
gnu: Add minetest-unifieddyes. 
* gnu/packages/minetest.scm (minetest-unifieddyes): New variable.

Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
 2021-08-20 12:41:55 +02:00
Maxime Devos
a471acd9d3
gnu: Add minetest-basic-materials. 
* gnu/packages/minetest.scm (minetest-basic-materials): New variable.

Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
 2021-08-20 12:41:54 +02:00
Maxime Devos
60a30d33f6
gnu: Add minetest-mesecons. 
* gnu/packages/minetest.scm (minetest-mesecons): New variable.

Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
 2021-08-20 12:41:54 +02:00
Maxime Devos
7b9d5b6ca0
gnu: minetest: New package module. 
Aside from the 'minetest-topic' procedure which will be used
for the 'home-page' field of some packages, this module is
currently empty.  The 'contentdb' importer defined in the
following patches will be used to populate this module.

* gnu/packages/minetest.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.

Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
 2021-08-20 12:41:53 +02:00
Maxime Devos
bb61100ee3
gnu: minetest: Search for mods in MINETEST_MOD_PATH. 
* gnu/packages/patches/minetest-add-MINETEST_MOD_PATH.patch: New file.
* gnu/packages/games.scm
  (minetest)[source]{patches}: Add it.
  (minetest)[native-search-paths]: Add "MINETEST_MOD_PATH".
* gnu/local.mk (dist_patch_DATA): Add the patch.

Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
 2021-08-20 12:41:30 +02:00
Maxime Devos
bfadab9177
gnu: minetest: Respect --without-tests. 
* gnu/packages/games.scm
  (minetest)[arguments]<#:phases>{check}: Use 'tests?' instead
  of ',(%current-target-system)'. Remove trailing #t.

Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
 2021-08-20 12:26:58 +02:00
Ricardo Wurmus
27952318a5
gnu: fastp: Update to 0.20.1. 
* gnu/packages/bioinformatics.scm (fastp): Update to 0.20.1.
[arguments]: Set PREFIX instead of BINDIR.
 2021-08-20 10:49:48 +02:00
Leo Famulari
343a0bb157
gnu: duperemove: Update to 0.11.3. 
* gnu/packages/disk.scm (duperemove): Update to 0.11.3.
 2021-07-27 12:34:56 -04:00
Leo Famulari
bf8ee37e73
gnu: linux-libre 5.4: Update to 5.4.142. 
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.142.
(linux-libre-5.4-pristine-source): Update hash.
 2021-07-27 12:35:01 -04:00
Leo Famulari
1bcd652cb9
gnu: linux-libre 5.10: Update to 5.10.60. 
* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.60.
(linux-libre-5.10-pristine-source): Update hash.
 2021-07-27 12:35:01 -04:00
Leo Famulari
0a32302df3
gnu: linux-libre: Update to 5.13.12. 
* gnu/packages/linux.scm (linux-libre-5.13-version): Update to 5.13.12.
(linux-libre-5.13-pristine-source): Update hash.
 2021-07-27 12:34:57 -04:00
Andrew Tropin
62eb249f8a
gnu: Add emacs-pcmpl-args. 
* gnu/packages/emacs-xyz.scm (emacs-pcmpl-args): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-08-18 19:07:50 +02:00
Xinglu Chen
9b2d2c6223
gnu: Add emacs-srfi. 
* gnu/packages/emacs-xyz.scm (emacs-srfi): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-08-18 19:04:50 +02:00
Xinglu Chen
503272077e
gnu: emacs-consult: Update to 0.11. 
* gnu/packages/emacs-xyz.scm (emacs-consult): Update to 0.11.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-08-18 18:52:59 +02:00
Nicolas Goaziou
fe98d35412
gnu: emacs-magit-gerrit: Update to 0.4. 
* gnu/packages/emacs-xyz.scm (emacs-magit-gerrit): Update to 0.4.
 2021-08-18 17:33:14 +02:00
Nicolas Goaziou
672739cc9d
gnu: emacs-org-re-reveal: Update to 3.10.0. 
* gnu/packages/emacs-xyz.scm (emacs-org-re-reveal): Update to 3.10.0.
 2021-08-18 17:29:41 +02:00
Vinicius Monego
75e7e4e71c
gnu: Add gcolor3. 
* gnu/packages/gnome.scm (gcolor3): New variable.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
 2021-08-18 19:50:49 +05:30
Arun Isaac
d31301dfe0
gnu: Add python-pyan3. 
* gnu/packages/python-xyz.scm (python-pyan3): New variable.
* gnu/packages/patches/python-pyan3-fix-absolute-path-bug.patch,
gnu/packages/patches/python-pyan3-fix-positional-arguments.patch: New files.
* gnu/local.mk: Register them.
 2021-08-18 19:27:58 +05:30
Brice Waegeneire
ea04295256
gnu: git: Hide CVEs from the linter. 
* gnu/packages/version-control.scm (git)[properties]: Set 'properties'
  field.
 2021-08-17 20:33:23 +02:00
Brice Waegeneire
a45d5a9478
gnu: git: Update to 2.33.0. 
* gnu/packages/version-control.scm (git): Update to 2.33.0.
 2021-08-17 20:01:45 +02:00
BonfaceKilz
5fbeb09f91
gnu: Add go-github-com-aswinkarthik-csvdiff. 
* gnu/packages/golang.scm (go-github-com-aswinkarthik-csvdiff): New variable.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
 2021-08-17 13:54:24 +05:30
BonfaceKilz
66cb568e31
gnu: Add go-github-com-oneofone-xxhash. 
* gnu/packages/golang.scm (go-github-com-oneofone-xxhash): New variable.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
 2021-08-17 13:50:12 +05:30
Danial Behzadi
f7094f5a42
gnu: tractor: Update to 3.12. 
* gnu/packages/tor.scm (tractor): Update to 3.12.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-08-17 10:27:31 +03:00
Oleg Pykhalov
b948ab8b56
services: slim: Add pam-gnupg support. 
* gnu/system/pam.scm (unix-pam-service): Add account and session PAM entries
for pam-gnupg.  Don't pass "#f" to "allow-root?" argument, because "lambda*"
already does this by default.
* doc/guix.texi (X Window): Document this.
* gnu/services/xorg.scm (<slim-configuration>)[gnupg?]: New record field.
(slim-pam-service): Pass "#:gnupg?" argument to "unix-pam-service".
 2021-08-17 01:10:25 +03:00
Oleg Pykhalov
ef4a931532
gnu: Add pam-gnupg. 
* gnu/packages/linux.scm (pam-gnupg): New variable.
 2021-08-17 01:10:25 +03:00
Tobias Geerinckx-Rice
43b7da5cb9
gnu: tor: Update to 0.4.6.7 [fixes CVE-2021-38385]. 
* gnu/packages/tor.scm (tor): Update to 0.4.6.7.
 2021-08-16 23:21:18 +02:00
Brice Waegeneire
a9eb969bb6
gnu: network-manager-applet: Update to 1.22.0. 
* gnu/packages/gnome.scm (network-manager-applet): Update to 1.22.0.
 2021-08-16 19:32:31 +02:00
Nicolas Goaziou
0fa49fd2a8
gnu: cataclysm-dda: Update to 0.F-1. 
* gnu/packages/games.scm (cataclysm-dda): Update to 0.F-1.
 2021-08-16 11:03:21 +02:00
Nicolas Goaziou
020a67489c
gnu: emacs-consult-notmuch: Update to 0.4. 
* gnu/packages/emacs-xyz.scm (emacs-consult-notmuch): Update to 0.4.
 2021-08-16 10:34:37 +02:00
Nicolas Goaziou
d2c1bf6b9a
gnu: emacs-olivetti: Update to 2.0.1. 
* gnu/packages/emacs-xyz.scm (emacs-olivetti): Update to 2.0.1.
 2021-08-16 10:30:23 +02:00
Nicolas Goaziou
acc41180ef
gnu: emacs-org-fragtog: Update to 0.4.0. 
* gnu/packages/emacs-xyz.scm (emacs-org-fragtog): Update to 0.4.0.
 2021-08-16 10:25:02 +02:00
Charles
5d2853f4b2
gnu: Add cl-yxorp-cli. 
* gnu/packages/lisp-xyz.scm (cl-yxorp-cli): New variable.

Co-authored-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-08-16 10:01:26 +02:00
Charles
6fcaf85337
gnu: Add cl-yxorp. 
* gnu/packages/lisp-xyz.scm (cl-yxorp, ecl-yxorp, sbcl-yxorp): New variables.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-08-16 09:34:03 +02:00
Leo Famulari
f80b377e10
gnu: linux-libre 4.4: Update to 4.4.281. 
* gnu/packages/linux.scm (linux-libre-4.4-version): Update to 4.4.281.
(linux-libre-4.4-pristine-source): Update hash.
 2021-07-27 12:35:01 -04:00
Leo Famulari
89f36c4119
gnu: linux-libre 4.9: Update to 4.9.280. 
* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.280.
(linux-libre-4.9-pristine-source): Update hash.
 2021-07-27 12:35:01 -04:00
Leo Famulari
91dc085cbe
gnu: linux-libre 4.14: Update to 4.14.244. 
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.244.
(linux-libre-4.14-pristine-source): Update hash.
 2021-07-27 12:35:01 -04:00
Leo Famulari
1332f8e9ab
gnu: linux-libre 4.19: Update to 4.19.204. 
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.204.
(linux-libre-4.19-pristine-source): Update hash.
 2021-07-27 12:35:00 -04:00
Leo Famulari
66680c59d9
gnu: linux-libre 5.4: Update to 5.4.141. 
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.141.
(linux-libre-5.4-pristine-source): Update hash.
 2021-07-27 12:35:00 -04:00
Leo Famulari
b6ff990f3d
gnu: linux-libre 5.10: Update to 5.10.59. 
* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.59.
(linux-libre-5.10-pristine-source): Update hash.
 2021-07-27 12:35:00 -04:00
Leo Famulari
b57f466711
gnu: linux-libre: Update to 5.13.11. 
* gnu/packages/linux.scm (linux-libre-5.13-version): Update to 5.13.11.
(linux-libre-5.13-pristine-source): Update hash.
 2021-07-27 12:34:57 -04:00
Leo Famulari
12099eac1b
gnu: OpenSSL 1.0.2: Hide this package. 
* gnu/packages/tls.scm (openssl-1.0): Wrap in 'hidden-package'.
 2021-07-27 12:34:57 -04:00
Giovanni Biscuolo
05effbbfc2
gnu: adb: Make compatible with OpenSSL 1.1. 
OpenSSL version 1.1 brought some API changes which broke the build here, fix
that by accessing rsa->n (and e) directly, using RSA_get0_key instead.

* gnu/packages/patches/adb-libssl_11-compatibility.patch: New file
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/android.scm (android-platform-system-core)[origin]: Use it.
(adb)[inputs]: Replace openssl-1.0 with openssl.
 2021-07-27 12:34:57 -04:00
Leo Famulari
ef9dc9efa4
gnu: Remove tlsdate. 
As discussed in <https://bugs.gnu.org/46602>, tlsdate does not support a
current release of OpenSSL.

* gnu/packages/ntp.scm (tlsdate): Remove variable.
 2021-07-27 12:34:57 -04:00
Leo Famulari
314ad6435c
gnu: Remove psyclpc. 
As discussed in <https://bugs.gnu.org/46602>, psyclpc does not support a
current release of OpenSSL.

* gnu/packages/messaging.scm (psyclpc): Remove variable.
 2021-07-27 12:34:57 -04:00
Leo Famulari
8e47a8e8a7
gnu: Remove eschalot. 
As discussed in <https://bugs.gnu.org/46602>, eschalot does not support
a current release of OpenSSL.

* gnu/packages/crypto.scm (eschalot): Remove variable.
 2021-07-27 12:34:57 -04:00
Leo Famulari
d89a529760
gnu: Remove cadaver. 
As discussed in <https://bugs.gnu.org/46602>, cadaver does not support a
current release of OpenSSL.

* gnu/packages/web.scm (cadaver): Remove variable.
 2021-07-27 12:34:56 -04:00
Leo Famulari
0652abcf3f
gnu: Remove pidentd. 
As discussed in <https://bugs.gnu.org/46602>, pidentd does not support a
current release of OpenSSL, and there does not seem to be any activity
upstream to improve that.

* gnu/packages/networking.scm (pidentd): Remove variable.
 2021-07-27 12:34:56 -04:00
Leo Famulari
d90bb7edca
gnu: Remove dillo. 
As discussed in <https://bugs.gnu.org/46602>, Dillo does not include a
supported implementation of TLS / HTTPS, and there does not seem to be
any activity upstream to improve that.

* gnu/packages/web-browsers.scm (dillo): Remove variable.
 2021-07-27 12:34:56 -04:00
Leo Famulari
8d80a70853
gnu: Syncthing: Update to 1.16.1. 
* gnu/packages/syncthing.scm (syncthing): Update to 1.16.1.
[arguments]: Adjust the custom install phase to upstream changes.
 2021-07-27 12:34:57 -04:00
Leo Famulari
a81dd42465
Revert "gnu: syncthing: Prepare for cross-compiling." 
This commit broke splitting the package into multiple outputs.

See <https://bugs.gnu.org/50071>.

This reverts commit b33f5d7ff0.
 2021-07-27 12:34:56 -04:00
Christopher Lemmer Webber
9455143907
Update copyright/name notices for Christine Lemmer-Webber. 
* doc/guix-cookbook.texi: Update copyright/name for Christine Lemmer-Webber.
* gnu/build/image.scm: Likewise.
* gnu/build/vm.scm: Likewise.
* gnu/packages/admin.scm: Likewise.
* gnu/packages/assembly.scm: Likewise.
* gnu/packages/audio.scm: Likewise.
* gnu/packages/backup.scm: Likewise.
* gnu/packages/check.scm: Likewise.
* gnu/packages/databases.scm: Likewise.
* gnu/packages/emacs-xyz.scm: Likewise.
* gnu/packages/finance.scm: Likewise.
* gnu/packages/gnupg.scm: Likewise.
* gnu/packages/guile-xyz.scm: Likewise.
* gnu/packages/guile.scm: Likewise.
* gnu/packages/haskell-xyz.scm: Likewise.
* gnu/packages/linux.scm: Likewise.
* gnu/packages/mail.scm: Likewise.
* gnu/packages/password-utils.scm: Likewise.
* gnu/packages/perl.scm: Likewise.
* gnu/packages/python-web.scm: Likewise.
* gnu/packages/python-xyz.scm: Likewise.
* gnu/packages/python.scm: Likewise.
* gnu/packages/sphinx.scm: Likewise.
* gnu/packages/ssh.scm: Likewise.
* gnu/packages/xdisorg.scm: Likewise.
* gnu/services/networking.scm: Likewise.
* gnu/system/vm.scm: Likewise.
 2021-08-15 14:15:37 -04:00
Leo Famulari
6ebba29503
gnu: gnuradio: Don't include QtWebKit in the dependency graph. 
* gnu/packages/radio.scm (gnuradio)[inputs]: Replace python-pyqt with
python-pyqt-without-qtwebkit.
 2021-07-27 12:34:57 -04:00
Efraim Flashner
3b60f6ffd8
gnu: exiv2: Enable tests. 
* gnu/packages/image.scm (exiv2)[arguments]: Don't skip tests. Add
test-target, configure-flags to enable tests.
[native-inputs]: Add googletest, python.
 2021-08-15 10:16:38 +03:00
Efraim Flashner
079b117a71
gnu: exiv2: Update to 0.27.4. 
* gnu/packages/image.scm (exiv2): Update to 0.27.4.
 2021-08-15 10:05:49 +03:00
Brice Waegeneire
e0feacfbad
gnu: ddcci-driver-linux: Update to 0.3.4. 
* gnu/packages/linux.scm (ddcci-driver-linux): Update to 0.3.4.
 2021-08-15 08:44:06 +02:00
Xinglu Chen
d65bcea6e3
gnu: Add emacs-ahg. 
* gnu/packages/emacs-xyz.scm (emacs-ahg): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-08-15 07:55:32 +02:00
Nicolas Goaziou
5058605d51
gnu: wob: Update to 0.12. 
* gnu/packages/xdisorg.scm (wob): Update to 0.12.
 2021-08-15 07:48:44 +02:00
Nicolas Goaziou
a5a8da3f23
gnu: emacs-editorconfig: Update to 0.8.2. 
* gnu/packages/emacs-xyz.scm (emacs-editorconfig): Update to 0.8.2.
 2021-08-15 07:47:29 +02:00
Nicolas Goaziou
ee467c853a
gnu: emacs-map: Update to 3.1. 
* gnu/packages/emacs-xyz.scm (emacs-map): Update to 3.1.
 2021-08-15 07:45:21 +02:00
Nicolas Goaziou
78007e12a2
gnu: emacs-auctex: Update to 13.0.13. 
* gnu/packages/emacs-xyz.scm (emacs-auctex): Update to 13.0.13.
 2021-08-15 07:45:12 +02:00
Leo Famulari
5e240e4d94
gnu: rtl8812au-aircrack-ng-linux-module: Update to 5.6.4.2-5.b8167e6. 
Fixes the build with linux-libre 5.12.

Reported by philipper905 on #guix.

* gnu/packages/linux.scm (rtl8812au-aircrack-ng-linux-module): Update to
5.6.4.2-5.b8167e6.
 2021-07-27 12:34:56 -04:00
Leo Famulari
6da9f44a87
gnu: linux-libre 4.19: Update to 4.19.203. 
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.203.
(linux-libre-4.19-pristine-source): Update hash.
 2021-07-27 12:35:03 -04:00
Leo Famulari
eb2a5115ec
gnu: linux-libre 5.4: Update to 5.4.140. 
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.140.
(linux-libre-5.4-pristine-source): Update hash.
 2021-07-27 12:35:03 -04:00
Leo Famulari
c4c1856dd2
gnu: linux-libre 5.10: Update to 5.10.58. 
* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.58.
(linux-libre-5.10-pristine-source): Update hash.
 2021-07-27 12:35:03 -04:00
Leo Famulari
a7ba5b6b47
gnu: linux-libre: Update to 5.13.10. 
* gnu/packages/linux.scm (linux-libre-5.13-version): Update to 5.13.10.
(linux-libre-5.13-pristine-source): Update hash.
 2021-07-27 12:34:58 -04:00
Danny Milosavljevic
a47ecef2f1
gnu: electrum: Add Ledger support. 
* gnu/packages/finance.scm (electrum)[inputs]: Add python-hidapi,
python-ledgerblue, python-btchip-python.
 2021-08-14 15:05:18 +02:00
Danny Milosavljevic
98b47af0ad
gnu: Add python-btchip-python. 
* gnu/packages/finance.scm (python-btchip-python): New variable.
 2021-08-14 15:05:12 +02:00
Mathieu Othacehe
c0e782f0da
gnu: linux-libre: Add perf probe support. 
* gnu/packages/aux-files/linux-libre/5.10-i686.conf: Enable
CONFIG_UPROBE_EVENTS option.
* gnu/packages/aux-files/linux-libre/5.10-x86_64.conf: Ditto.
* gnu/packages/aux-files/linux-libre/5.13-i686.conf: Ditto.
* gnu/packages/aux-files/linux-libre/5.13-x86_64.conf: Ditto.
* gnu/packages/aux-files/linux-libre/5.4-i686.conf: Ditto.
* gnu/packages/aux-files/linux-libre/5.4-x86_64.conf: Ditto.
 2021-08-14 14:31:59 +02:00
Guillaume Le Vaillant
8bd68bd220
gnu: Add gnss-sdr. 
* gnu/packages/radio.scm (gnss-sdr): New variable.
 2021-08-14 09:39:13 +02:00
Brice Waegeneire
bccfcef473
gnu: icecat: Add WebAuthn support. 
* gnu/packages/gnuzilla.scm (icecat)[inputs]: Add eudev.
[phases]: Add eudev to the wrapper.
 2021-08-13 20:57:40 +02:00
Sergei Trofimovich
ccbeb7ef0e
gnu: re2c: Update to 2.2. 
* gnu/packages/re2c.scm (re2c): Update to 2.2.
[native-inputs]: Add python.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
 2021-08-13 23:00:41 +05:30
Maxim Cournoyer
0bfbd2ac8b
gnu: opendht: Update to 2.3.0. 
* gnu/packages/networking.scm (opendht): Update to 2.3.0.
 2021-08-13 12:15:45 -04:00
Xinglu Chen
bd3a4db8cb
gnu: Add emacs-placeholder. 
* gnu/packages/emacs-xyz.scm (emacs-placeholder): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-08-13 15:53:33 +02:00
Xinglu Chen
90b4abe36e
gnu: Add emacs-epithet. 
* gnu/packages/emacs-xyz.scm (emacs-epithet): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-08-13 15:53:29 +02:00
Xinglu Chen
776346fcda
gnu: Add emacs-filladapt. 
* gnu/packages/emacs-xyz.scm (emacs-filladapt): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-08-13 15:51:53 +02:00
Nicolas Goaziou
338f34d879
gnu: emacs-projectile: Update to 2.5.0. 
* gnu/packages/emacs-xyz.scm (emacs-projectile): Update to 2.5.0.
 2021-08-13 15:32:34 +02:00
Nicolas Goaziou
f16e4d85dd
gnu: emacs-geiser: Update to 0.17. 
* gnu/packages/emacs-xyz.scm (emacs-geiser): Update to 0.17.
[arguments]<#:phases>: Fix a typo prior to generating the documentation.
 2021-08-13 15:30:37 +02:00
Ricardo Wurmus
a79ad5fce5
gnu: pigx-rnaseq: Update to 0.0.19. 
* gnu/packages/bioinformatics.scm (pigx-rnaseq): Update to 0.0.19.
 2021-08-13 15:23:39 +02:00
Nicolas Goaziou
2202909d17
gnu: emacs-find-file-in-project: Update to 6.1.1. 
* gnu/packages/emacs-xyz.scm (emacs-find-file-in-project): Update to 6.1.1.
 2021-08-13 15:21:37 +02:00
Nicolas Goaziou
c9bcf8f736
gnu: emacs-crux: Update to 0.4.0. 
* gnu/packages/emacs-xyz.scm (emacs-crux): Update to 0.4.0.
 2021-08-13 15:20:22 +02:00
Nicolas Goaziou
241eff01f7
gnu: emacs-ebib: Update to 2.32.2. 
* gnu/packages/emacs-xyz.scm (emacs-ebib): Update to 2.32.2.
 2021-08-13 14:31:43 +02:00
Nicolas Goaziou
6835d3e790
gnu: emacs-parsebib: Update to 3.0.1. 
* gnu/packages/emacs-xyz.scm (emacs-parsebib): Update to 3.0.1.
 2021-08-13 14:27:45 +02:00
Mathieu Othacehe
cfd2442488
services: cuirass: Reverse the no-publish logic. 
This is a follow-up of d128c6fd33.

* gnu/services/cuirass.scm (<cuirass-remote-server-configuration>)
[no-publish?]: Rename it to ...
[publish?]: ... this new field.
(cuirass-shepherd-service): Adapt it.
* doc/guix.texi (Cuirass remote building): Document it.
 2021-08-13 13:46:21 +02:00
Paul Garlick
2caf9eafb6
gnu: python-pygmesh: Update to 7.1.10. 
* gnu/packages/simulation.scm (python-pygmah): Update to 7.1.10.
[arguments]<#:phases>: Tests have moved to the 'tests' directory.
The test_readme.py file has been removed.
 2021-08-13 09:28:21 +01:00
Paul Garlick
74b82ecd0e
gnu: python-pygmsh: Change source to 'git-fetch'. 
* gnu/packages/simulation.scm (python-pygmsh)[source]: Change to
'git-fetch'.
 2021-08-13 09:28:21 +01:00
Paul Garlick
d56a29edb7
gnu: python-pygmsh: Update snippet for Gmsh > 4.7.0. 
The old field option name is not needed after commit
78595fe3650057f258109c6599f4bae1d0e72e (Gmsh 4.8.4).

* gnu/packages/simulation.scm (python-pygmsh)[source]: Remove
option name substitution.
 2021-08-13 09:28:20 +01:00
Leo Famulari
d87d6d6812
gnu: khal: Update to 0.10.4. 
* gnu/packages/calendar.scm (khal): Update to 0.10.4.
 2021-07-27 12:34:57 -04:00
Mathieu Othacehe
1872dce578
gnu: drones: Remove it. 
Remove this file as the ardupilot packages are broken for a long time and no
one complained.

* gnu/packages/drones.scm: Remove it.
* gnu/local.mk (GNU_SYSTEM_MODULES): Ditto.
 2021-08-12 19:39:20 +02:00
Mathieu Othacehe
8221cf8349
services: cuirass: Fix the substitute-urls argument. 
This is a follow-up of: 23b5b168ae.

* gnu/services/cuirass.scm (cuirass-remote-worker-shepherd-service): Fix it.
 2021-08-12 14:58:18 +02:00