Commit Graph

3544 Commits

Author SHA1 Message Date
Mădălin Ionel Patrașcu
5fb5af5658
gnu: Add r-amplican.
* gnu/packages/bioconductor.scm (r-amplican): New variable.
2022-12-12 15:50:28 +01:00
Mădălin Ionel Patrașcu
8363719476
gnu: Add r-harshlight.
* gnu/packages/bioconductor.scm (r-harshlight): New variable.
2022-12-12 15:37:15 +01:00
Mădălin Ionel Patrașcu
85d5ce4901
gnu: Add r-altcdfenvs.
* gnu/packages/bioconductor.scm (r-altcdfenvs): New variable.
2022-12-12 15:37:15 +01:00
Mădălin Ionel Patrașcu
97b36ca4d3
gnu: Add r-makecdfenv.
* gnu/packages/bioconductor.scm (r-makecdfenv): New variable.
2022-12-12 15:37:15 +01:00
Mădălin Ionel Patrașcu
a712c07d6a
gnu: Add r-metaneighbor.
* gnu/packages/bioconductor.scm (r-metaneighbor): New variable.
2022-12-01 11:41:05 +01:00
Ricardo Wurmus
cef2cbb295
gnu: r-biodb: Update to 1.6.1.
* gnu/packages/bioconductor.scm (r-biodb): Update to 1.6.1.
2022-11-30 11:28:48 +01:00
Ricardo Wurmus
95e62fb993
gnu: r-biocparallel: Update to 1.32.3.
* gnu/packages/bioconductor.scm (r-biocparallel): Update to 1.32.3.
2022-11-30 11:28:48 +01:00
Ricardo Wurmus
6b825d9cb9
gnu: r-alpine: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-alpine): Update to 1.24.0.
2022-11-30 11:28:44 +01:00
Ricardo Wurmus
08fb5279a5
gnu: r-nmf: Update to 0.25.
* gnu/packages/bioconductor.scm (r-nmf): Update to 0.25.
[propagated-inputs]: Remove r-pkgmaker; add r-codetools.
2022-11-29 15:27:20 +01:00
Ricardo Wurmus
059d38dc3f
gnu: Add r-glmgampoi.
* gnu/packages/bioconductor.scm (r-glmgampoi): New variable.
2022-11-28 11:23:49 +01:00
Ricardo Wurmus
c29d999a34
gnu: r-ancombc: Update to 2.0.1.
* gnu/packages/bioconductor.scm (r-ancombc): Update to 2.0.1.
[propagated-inputs]: Remove r-microbiome, r-nlme, and r-phyloseq; add r-cvxr, r-emmeans,
r-lme4, r-lmertest, r-mia, r-rngtools, r-s4vectors,
r-singlecellexperiment, r-summarizedexperiment, and
r-treesummarizedexperiment.
2022-11-24 18:02:15 +01:00
Ricardo Wurmus
139da51753
gnu: Add r-mia.
* gnu/packages/bioconductor.scm (r-mia): New variable.
2022-11-24 18:02:15 +01:00
Ricardo Wurmus
90d8ac279f
gnu: Add r-treesummarizedexperiment.
* gnu/packages/bioconductor.scm (r-treesummarizedexperiment): New variable.
2022-11-24 18:02:15 +01:00
Mădălin Ionel Patrașcu
8d3bd8e4b0
gnu: Add r-ancombc.
* gnu/packages/bioconductor.scm (r-ancombc): New variable.
2022-11-24 18:02:15 +01:00
Ricardo Wurmus
fa59a22140
gnu: r-aims: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-aims): Update to 1.30.0.
2022-11-24 15:36:18 +01:00
Mădălin Ionel Patrașcu
2e85d26ebb
gnu: Add r-aims.
* gnu/packages/bioconductor.scm (r-aims): New variable.
2022-11-24 15:35:38 +01:00
Ricardo Wurmus
6f39e16124
gnu: r-alevinqc: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-alevinqc): Update to 1.14.0.
2022-11-24 15:28:15 +01:00
Mădălin Ionel Patrașcu
5dc82a7f8b
gnu: Add r-alevinqc.
* gnu/packages/bioconductor.scm (r-alevinqc): New variable.
2022-11-24 15:22:28 +01:00
Ricardo Wurmus
610616d448
gnu: r-alphabeta: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-alphabeta): Update to 1.12.0.
2022-11-24 15:13:50 +01:00
Mădălin Ionel Patrașcu
6c7f0849c1
gnu: Add r-alphabeta.
* gnu/packages/bioconductor.scm (r-alphabeta): New variable.
2022-11-24 15:09:13 +01:00
Ricardo Wurmus
c706a0a2af
gnu: r-asafe: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-asafe): Update to 1.24.0.
2022-11-24 15:02:41 +01:00
Mădălin Ionel Patrașcu
01124e5a10
gnu: Add r-asafe.
* gnu/packages/bioconductor.scm (r-asafe): New variable.
2022-11-24 15:02:10 +01:00
Ricardo Wurmus
c2cba91ac9
gnu: r-arrayexpress: Update to 1.57.0.
* gnu/packages/bioconductor.scm (r-arrayexpress): Update to 1.57.0.
2022-11-24 14:54:41 +01:00
Mădălin Ionel Patrașcu
13e8930efb
gnu: Add r-arrayexpress.
* gnu/packages/bioconductor.scm (r-arrayexpress): New variable.
2022-11-24 14:53:09 +01:00
Ricardo Wurmus
f43a41d196
gnu: r-scuttle: Update to 1.8.1.
* gnu/packages/bioconductor.scm (r-scuttle): Update to 1.8.1.
2022-11-24 12:32:11 +01:00
Ricardo Wurmus
a2ad5b53bf
gnu: r-rgreat: Update to 2.0.2.
* gnu/packages/bioconductor.scm (r-rgreat): Update to 2.0.2.
2022-11-24 12:32:11 +01:00
Ricardo Wurmus
8bfac375aa
gnu: r-bioccheck: Update to 1.34.2.
* gnu/packages/bioconductor.scm (r-bioccheck): Update to 1.34.2.
2022-11-24 12:32:11 +01:00
Ricardo Wurmus
f9747ecc2c
gnu: r-dose: Update to 3.24.2.
* gnu/packages/bioconductor.scm (r-dose): Update to 3.24.2.
2022-11-24 12:32:10 +01:00
Ricardo Wurmus
a5ee462b7a
gnu: r-shortread: Update to 1.56.1.
* gnu/packages/bioconductor.scm (r-shortread): Update to 1.56.1.
2022-11-24 12:32:10 +01:00
Ricardo Wurmus
3bc54ddeab
gnu: r-chipseeker: Update to 1.34.1.
* gnu/packages/bioconductor.scm (r-chipseeker): Update to 1.34.1.
2022-11-24 12:32:10 +01:00
Ricardo Wurmus
d3696e71a9
gnu: r-deconvr: Update to 1.4.2.
* gnu/packages/bioconductor.scm (r-deconvr): Update to 1.4.2.
2022-11-24 12:32:10 +01:00
Ricardo Wurmus
04340b27ba
gnu: r-bambu: Update to 3.0.2.
* gnu/packages/bioconductor.scm (r-bambu): Update to 3.0.2.
2022-11-24 12:32:10 +01:00
zimoun
54afdb3de1
gnu: r-phyloseq: Update to 1.42.0.
* gnu/packages/bioconductor.scm (r-phyloseq): Update to 1.42.0.
2022-11-24 12:32:09 +01:00
zimoun
9988c60ea3
gnu: r-tximeta: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-tximeta): Update to 1.16.0.
2022-11-24 12:32:09 +01:00
zimoun
5140be4c81
gnu: r-tricycle: Update to 1.6.0.
* gnu/packages/bioconductor.scm (r-tricycle): Update to 1.6.0.
2022-11-24 12:32:09 +01:00
zimoun
7a33311bfd
gnu: r-tcgabiolinks: Update to 2.25.3.
* gnu/packages/bioconductor.scm (r-tcgabiolinks): Update to 2.25.3.
2022-11-24 12:32:09 +01:00
zimoun
dde0da5a95
gnu: r-biscuiteer: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-biscuiteer): Update to 1.12.0.
2022-11-24 12:32:09 +01:00
zimoun
926fe78f73
gnu: r-omnipathr: Update to 3.5.25.
* gnu/packages/bioconductor.scm (r-omnipathr): Update to 3.5.25.
[propagated-inputs]: Add r-rmarkdown and r-rvest.
2022-11-24 12:32:08 +01:00
zimoun
3f58454739
gnu: r-omicade4: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-omicade4): Update to 1.38.0.
2022-11-24 12:32:08 +01:00
zimoun
e524c12e06
gnu: r-dmrseq: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-dmrseq): Update to 1.18.0.
2022-11-24 12:32:08 +01:00
zimoun
95792cda89
gnu: r-dada2: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-dada2): Update to 1.26.0.
2022-11-24 12:32:08 +01:00
zimoun
c2c91d9dfe
gnu: r-bsseq: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-bsseq): Update to 1.34.0.
2022-11-24 12:32:08 +01:00
zimoun
3b8df103f7
gnu: r-biotmle: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-biotmle): Update to 1.22.0.
2022-11-24 12:32:08 +01:00
zimoun
3ed0a63106
gnu: r-biotip: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-biotip): Update to 1.12.0.
2022-11-24 12:32:08 +01:00
zimoun
f230df5f4f
gnu: r-bioqc: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-bioqc): Update to 1.26.0.
2022-11-24 12:32:07 +01:00
zimoun
219b98fee9
gnu: r-bionetstat: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-bionetstat): Update to 1.18.0.
2022-11-24 12:32:07 +01:00
zimoun
01fb7c35e7
gnu: r-bionet: Update to 1.58.0.
* gnu/packages/bioconductor.scm (r-bionet): Update to 1.58.0.
2022-11-24 12:32:07 +01:00
zimoun
1118d6e856
gnu: r-bionero: Update to 1.6.0.
* gnu/packages/bioconductor.scm (r-bionero): Update to 1.6.0.
2022-11-24 12:32:07 +01:00
zimoun
858d9ccd9b
gnu: r-biomvrcns: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-biomvrcns): Update to 1.38.0.
2022-11-24 12:32:07 +01:00
zimoun
c0412736d8
gnu: r-biomvcclass: Update to 1.66.0.
* gnu/packages/bioconductor.scm (r-biomvcclass): Update to 1.66.0.
2022-11-24 12:32:07 +01:00
zimoun
3879ddbdb9
gnu: r-mvcclass: Update to 1.72.0.
* gnu/packages/bioconductor.scm (r-mvcclass): Update to 1.72.0.
2022-11-24 12:32:07 +01:00
zimoun
4875f37cb6
gnu: r-biomformat: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-biomformat): Update to 1.26.0.
2022-11-24 12:32:06 +01:00
zimoun
ffd5e53e87
gnu: r-biodb: Update to 1.6.0.
* gnu/packages/bioconductor.scm (r-biodb): Update to 1.6.0.
2022-11-24 12:32:06 +01:00
zimoun
efc663040b
gnu: r-biocdockermanager: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-biocdockermanager): Update to 1.10.0.
2022-11-24 12:32:06 +01:00
zimoun
4fcf1f08ec
gnu: r-biocthis: Update to 1.8.1.
* gnu/packages/bioconductor.scm (r-biocthis): Update to 1.8.1.
2022-11-24 12:32:06 +01:00
zimoun
3aea2c40d8
gnu: r-basilisk: Update to 1.10.2.
* gnu/packages/bioconductor.scm (r-basilisk): Update to 1.10.2.
2022-11-24 12:32:06 +01:00
zimoun
f5a514b605
gnu: r-basilisk-utils: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-basilisk-utils): Update to 1.10.0.
2022-11-24 12:32:06 +01:00
zimoun
925642f837
gnu: r-dir-expiry: Update to 1.6.0.
* gnu/packages/bioconductor.scm (r-dir-expiry): Update to 1.6.0.
2022-11-24 12:32:06 +01:00
zimoun
727cd07d1a
gnu: r-genetclassifier: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-genetclassifier): Update to 1.38.0.
2022-11-24 12:32:05 +01:00
zimoun
dbaad2365a
gnu: r-minet: Update to 3.56.0.
* gnu/packages/bioconductor.scm (r-minet): Update to 3.56.0.
2022-11-24 12:32:05 +01:00
zimoun
8ba466faff
gnu: r-biobtreer: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-biobtreer): Update to 1.10.0.
2022-11-24 12:32:05 +01:00
zimoun
009ac4e3a9
gnu: r-bgeedb: Update to 2.24.0.
* gnu/packages/bioconductor.scm (r-bgeedb): Update to 2.24.0.
2022-11-24 12:32:05 +01:00
zimoun
3912f43996
gnu: r-bgeecall: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-bgeecall): Update to 1.14.0.
2022-11-24 12:32:05 +01:00
zimoun
81cea8424d
gnu: r-beclear: Update to 2.14.0.
* gnu/packages/bioconductor.scm (r-beclear): Update to 2.14.0.
[propagated-inputs]: Add r-ids.
2022-11-24 12:32:05 +01:00
zimoun
5604f64c34
gnu: r-megadepth: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-megadepth): Update to 1.8.0.
2022-11-24 12:32:05 +01:00
zimoun
3823aa40a3
gnu: r-ballgown: Update to 2.30.0.
* gnu/packages/bioconductor.scm (r-ballgown): Update to 2.30.0.
2022-11-24 12:32:04 +01:00
zimoun
3ca58a4ff3
gnu: r-guitar: Update to 2.14.0.
* gnu/packages/bioconductor.scm (r-guitar): Update to 2.14.0.
2022-11-24 12:32:04 +01:00
zimoun
5950a171ba
gnu: r-chromstar: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-chromstar): Update to 1.24.0.
2022-11-24 12:32:04 +01:00
zimoun
1ff0bc4e7b
gnu: r-snpstats: Update to 1.48.0.
* gnu/packages/bioconductor.scm (r-snpstats): Update to 1.48.0.
2022-11-24 12:32:04 +01:00
zimoun
ddc7edf0b3
gnu: r-pathview: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-pathview): Update to 1.38.0.
2022-11-24 12:32:04 +01:00
zimoun
1315c532de
gnu: r-ldblock: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-ldblock): Update to 1.28.0.
2022-11-24 12:32:04 +01:00
zimoun
db290bf5b9
gnu: r-kegggraph: Update to 1.58.0.
* gnu/packages/bioconductor.scm (r-kegggraph): Update to 1.58.0.
2022-11-24 12:32:04 +01:00
zimoun
b6e56ceeb9
gnu: r-gwascat: Update to 2.30.0.
* gnu/packages/bioconductor.scm (r-gwascat): Update to 2.30.0.
2022-11-24 12:32:03 +01:00
zimoun
5f3ff4f884
gnu: r-gviz: Update to 1.42.0.
* gnu/packages/bioconductor.scm (r-gviz): Update to 1.42.0.
2022-11-24 12:32:03 +01:00
zimoun
34867ac9cf
gnu: r-ggbio: Update to 1.46.0.
* gnu/packages/bioconductor.scm (r-ggbio): Update to 1.46.0.
2022-11-24 12:32:03 +01:00
zimoun
77f2aa3fa4
gnu: r-erma: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-erma): Update to 1.14.0.
2022-11-24 12:32:03 +01:00
zimoun
dbeb05e6a3
gnu: r-catalyst: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-catalyst): Update to 1.22.0.
2022-11-24 12:32:03 +01:00
zimoun
01e78296bc
gnu: r-msmstests: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-msmstests): Update to 1.36.0.
2022-11-24 12:32:03 +01:00
zimoun
5c6c7831d6
gnu: r-msmseda: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-msmseda): Update to 1.36.0.
2022-11-24 12:32:03 +01:00
zimoun
94a86e7e39
gnu: r-biocio: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-biocio): Update to 1.8.0.
2022-11-24 12:32:02 +01:00
zimoun
0640f750b4
gnu: r-msfeatures: Update to 1.6.0.
* gnu/packages/bioconductor.scm (r-msfeatures): Update to 1.6.0.
2022-11-24 12:32:02 +01:00
zimoun
b5a0d81448
gnu: r-mscoreutils: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-mscoreutils): Update to 1.10.0.
2022-11-24 12:32:02 +01:00
zimoun
377a9b2177
gnu: r-delayedmatrixstats: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-delayedmatrixstats): Update to 1.20.0.
2022-11-24 12:32:02 +01:00
zimoun
2dc26068eb
gnu: r-sparsematrixstats: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-sparsematrixstats): Update to 1.10.0.
2022-11-24 12:32:02 +01:00
zimoun
c73d3e9bad
gnu: r-scran: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-scran): Update to 1.26.0.
2022-11-24 12:32:02 +01:00
zimoun
14e3905c6e
gnu: r-scater: Update to 1.26.1.
* gnu/packages/bioconductor.scm (r-scater): Update to 1.26.1.
[propagated-inputs]: Add r-ggrastr, r-pheatmap, and r-uwot.
2022-11-24 12:32:02 +01:00
zimoun
3fa18b5504
gnu: r-scuttle: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-scuttle): Update to 1.8.0.
2022-11-24 12:32:01 +01:00
zimoun
54a67ddf86
gnu: r-singler: Update to 2.0.0.
* gnu/packages/bioconductor.scm (r-singler): Update to 2.0.0.
2022-11-24 12:32:01 +01:00
zimoun
d748ae3d00
gnu: r-singlecellexperiment: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-singlecellexperiment): Update to 1.20.0.
2022-11-24 12:32:01 +01:00
zimoun
64ccd0ff3c
gnu: r-chromvar: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-chromvar): Update to 1.20.0.
2022-11-24 12:32:01 +01:00
zimoun
5374b55b68
gnu: r-motifmatchr: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-motifmatchr): Update to 1.20.0.
2022-11-24 12:32:01 +01:00
zimoun
8b332d676d
gnu: r-maftools: Update to 2.14.0.
* gnu/packages/bioconductor.scm (r-maftools): Update to 2.14.0.
2022-11-24 12:32:01 +01:00
zimoun
21b32e45bd
gnu: r-tfbstools: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-tfbstools): Update to 1.36.0.
2022-11-24 12:32:00 +01:00
zimoun
6dc8ec0358
gnu: r-cner: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-cner): Update to 1.34.0.
2022-11-24 12:32:00 +01:00
zimoun
6dfa3f50b9
gnu: r-beachmat: Update to 2.14.0.
* gnu/packages/bioconductor.scm (r-beachmat): Update to 2.14.0.
2022-11-24 12:32:00 +01:00
zimoun
2a5fb31db9
gnu: r-rhdf5lib: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-rhdf5lib): Update to 1.20.0.
2022-11-24 12:32:00 +01:00
zimoun
9e45f2c183
gnu: r-hdf5array: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-hdf5array): Update to 1.26.0.
2022-11-24 12:32:00 +01:00
zimoun
ab92277de4
gnu: r-hitc: Update to 1.42.0.
* gnu/packages/bioconductor.scm (r-hitc): Update to 1.42.0.
2022-11-24 12:32:00 +01:00
zimoun
06c18fde52
gnu: r-fithic: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-fithic): Update to 1.24.0.
2022-11-24 12:31:59 +01:00
zimoun
65866be416
gnu: r-fishpond: Update to 2.4.0.
* gnu/packages/bioconductor.scm (r-fishpond): Update to 2.4.0.
2022-11-24 12:31:59 +01:00
zimoun
f074346f2c
gnu: r-rgraphviz: Update to 2.42.0.
* gnu/packages/bioconductor.scm (r-rgraphviz): Update to 2.42.0.
2022-11-24 12:31:59 +01:00
zimoun
96cd3b4bcf
gnu: r-s4vectors: Update to 0.36.0.
* gnu/packages/bioconductor.scm (r-s4vectors): Update to 0.36.0.
2022-11-24 12:31:59 +01:00
zimoun
4737a25691
gnu: r-preprocesscore: Update to 1.60.0.
* gnu/packages/bioconductor.scm (r-preprocesscore): Update to 1.60.0.
2022-11-24 12:31:59 +01:00
zimoun
a02007bd88
gnu: r-icens: Update to 1.70.0.
* gnu/packages/bioconductor.scm (r-icens): Update to 1.70.0.
2022-11-24 12:31:59 +01:00
zimoun
79c096cb2e
gnu: r-m3c: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-m3c): Update to 1.20.0.
2022-11-24 12:31:59 +01:00
zimoun
c705fcaaa5
gnu: r-rgreat: Update to 2.0.1.
* gnu/packages/bioconductor.scm (r-rgreat): Update to 2.0.1.
[propagated-inputs]: Add r-annotationdbi, r-circlize, r-digest, r-doparallel,
r-dt, r-foreach, r-genomeinfodb, r-genomicfeatures, r-globaloptions, r-go-db,
r-org-hs-eg-db, r-progress, r-rcolorbrewer, r-rcpp, r-s4vectors, r-shiny,
r-txdb-hsapiens-ucsc-hg19-knowngene, and r-txdb-hsapiens-ucsc-hg38-knowngene.
2022-11-24 12:31:59 +01:00
zimoun
4f3b6abb5f
gnu: r-pcatools: Update to 2.10.0.
* gnu/packages/bioconductor.scm (r-pcatools): Update to 2.10.0.
2022-11-24 12:31:58 +01:00
zimoun
29c12faa87
gnu: r-biodist: Update to 1.70.0.
* gnu/packages/bioconductor.scm (r-biodist): Update to 1.70.0.
2022-11-24 12:31:58 +01:00
zimoun
3e451b9415
gnu: r-biocworkflowtools: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-biocworkflowtools): Update to 1.24.0.
2022-11-24 12:31:58 +01:00
zimoun
ec4583b1d2
gnu: r-biocset: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-biocset): Update to 1.12.0.
2022-11-24 12:31:58 +01:00
zimoun
c1cff36f4c
gnu: r-biocpkgtools: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-biocpkgtools): Update to 1.16.0.
[propagated-inputs]: Remove r-tidyr and r-tidyselect.  Add r-rorcid.
2022-11-24 12:31:58 +01:00
zimoun
1a19353ae1
gnu: r-biocor: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-biocor): Update to 1.22.0.
2022-11-24 12:31:58 +01:00
zimoun
1eaf500dd6
gnu: r-bioconcotk: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-bioconcotk): Update to 1.18.0.
2022-11-24 12:31:58 +01:00
zimoun
5557dea898
gnu: r-multiassayexperiment: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-multiassayexperiment): Update to 1.24.0.
[propagated-inputs]: Add r-biocbaseutils and r-delayedarray.
2022-11-24 12:31:57 +01:00
zimoun
55c39e2947
gnu: r-grohmm: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-grohmm): Update to 1.32.0.
2022-11-24 12:31:57 +01:00
zimoun
9762908889
gnu: r-experimenthub: Update to 2.6.0.
* gnu/packages/bioconductor.scm (r-experimenthub): Update to 2.6.0.
2022-11-24 12:31:57 +01:00
zimoun
d87f979e28
gnu: r-biocviews: Update to 1.66.0.
* gnu/packages/bioconductor.scm (r-biocviews): Update to 1.66.0.
2022-11-24 12:31:57 +01:00
zimoun
dcb59af845
gnu: r-biocstyle: Update to 2.26.0.
* gnu/packages/bioconductor.scm (r-biocstyle): Update to 2.26.0.
2022-11-24 12:31:57 +01:00
zimoun
dfad35abc6
gnu: r-biocgraph: Update to 1.60.0.
* gnu/packages/bioconductor.scm (r-biocgraph): Update to 1.60.0.
2022-11-24 12:31:57 +01:00
zimoun
5f39d8aa86
gnu: r-bioccheck: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-bioccheck): Update to 1.34.0.
2022-11-24 12:31:57 +01:00
zimoun
712bce2124
gnu: r-ebarrays: Update to 2.62.0.
* gnu/packages/bioconductor.scm (r-ebarrays): Update to 2.62.0.
2022-11-24 12:31:57 +01:00
zimoun
0f7ac7b091
gnu: r-reactomepa: Update to 1.42.0.
* gnu/packages/bioconductor.scm (r-reactomepa): Update to 1.42.0.
[propagated-inputs]: Add r-gson.
2022-11-24 12:31:56 +01:00
zimoun
2cd3b14071
gnu: r-graphite: Update to 1.44.0.
* gnu/packages/bioconductor.scm (r-graphite): Update to 1.44.0.
[propagated-inputs]: Add r-purrr.
2022-11-24 12:31:56 +01:00
zimoun
828084b2cb
gnu: r-biobroom: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-biobroom): Update to 1.30.0.
2022-11-24 12:31:56 +01:00
zimoun
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gnu: r-bioassayr: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-bioassayr): Update to 1.36.0.
2022-11-24 12:31:56 +01:00
zimoun
4cf44682fb
gnu: r-fmcsr: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-fmcsr): Update to 1.40.0.
2022-11-24 12:31:56 +01:00
zimoun
8bbcb000c7
gnu: r-chemminer: Update to 3.50.0.
* gnu/packages/bioconductor.scm (r-chemminer): Update to 3.50.0.
2022-11-24 12:31:56 +01:00
zimoun
087322f6fa
gnu: r-bigpint: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-bigpint): Update to 1.14.0.
2022-11-24 12:31:56 +01:00
zimoun
dae60e1c1f
gnu: r-biggr: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-biggr): Update to 1.34.0.
2022-11-24 12:31:56 +01:00
zimoun
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gnu: r-hyperdraw: Update to 1.50.0.
* gnu/packages/bioconductor.scm (r-hyperdraw): Update to 1.50.0.
2022-11-24 12:31:55 +01:00
zimoun
7939489f80
gnu: r-hypergraph: Update to 1.70.0.
* gnu/packages/bioconductor.scm (r-hypergraph): Update to 1.70.0.
2022-11-24 12:31:55 +01:00
zimoun
4665e589d6
gnu: r-rsbml: Update to 2.56.0.
* gnu/packages/bioconductor.scm (r-rsbml): Update to 2.56.0.
2022-11-24 12:31:55 +01:00
zimoun
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gnu: r-bifet: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-bifet): Update to 1.18.0.
2022-11-24 12:31:55 +01:00
zimoun
002ef09276
gnu: r-bicare: Update to 1.56.0.
* gnu/packages/bioconductor.scm (r-bicare): Update to 1.56.0.
2022-11-24 12:31:55 +01:00
zimoun
02928ed15f
gnu: r-bhc: Update to 1.50.0.
* gnu/packages/bioconductor.scm (r-bhc): Update to 1.50.0.
2022-11-24 12:31:55 +01:00
zimoun
16e636eccb
gnu: r-bgx: Update to 1.64.0.
* gnu/packages/bioconductor.scm (r-bgx): Update to 1.64.0.
2022-11-24 12:31:55 +01:00
zimoun
ade1bef97a
gnu: r-bgmix: Update to 1.58.0.
* gnu/packages/bioconductor.scm (r-bgmix): Update to 1.58.0.
2022-11-24 12:31:55 +01:00
zimoun
fcde82ae09
gnu: r-acde: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-acde): Update to 1.28.0.
2022-11-24 12:31:54 +01:00
zimoun
5fed6cbcbc
gnu: r-acme: Update to 2.54.0.
* gnu/packages/bioconductor.scm (r-acme): Update to 2.54.0.
2022-11-24 12:31:54 +01:00
zimoun
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gnu: r-acgh: Update to 1.76.0.
* gnu/packages/bioconductor.scm (r-acgh): Update to 1.76.0.
2022-11-24 12:31:54 +01:00
zimoun
949b5f3ddb
gnu: r-ace: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-ace): Update to 1.16.0.
2022-11-24 12:31:54 +01:00
zimoun
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gnu: r-universalmotif: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-universalmotif): Update to 1.16.0.
2022-11-24 12:31:54 +01:00
zimoun
ba16a0a2ee
gnu: r-unifiedwmwqpcr: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-unifiedwmwqpcr): Update to 1.34.0.
2022-11-24 12:31:54 +01:00
zimoun
86eddd9e14
gnu: r-htqpcr: Update to 1.52.0.
* gnu/packages/bioconductor.scm (r-htqpcr): Update to 1.52.0.
2022-11-24 12:31:54 +01:00
zimoun
30bfeccabb
gnu: r-variancepartition: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-variancepartition): Update to 1.28.0.
2022-11-24 12:31:53 +01:00
zimoun
8a2f4b7192
gnu: r-variantfiltering: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-variantfiltering): Update to 1.34.0.
2022-11-24 12:31:53 +01:00
zimoun
827abdb960
gnu: r-wavcluster: Update to 2.32.0.
* gnu/packages/bioconductor.scm (r-wavcluster): Update to 2.32.0.
2022-11-24 12:31:53 +01:00
zimoun
d9b593d522
gnu: r-reqon: Update to 1.44.0.
* gnu/packages/bioconductor.scm (r-reqon): Update to 1.44.0.
2022-11-24 12:31:53 +01:00
zimoun
1f7c82bf0b
gnu: r-seqbias: Update to 1.46.0.
* gnu/packages/bioconductor.scm (r-seqbias): Update to 1.46.0.
2022-11-24 12:31:53 +01:00
zimoun
63b8d104dc
gnu: r-bigmelon: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-bigmelon): Update to 1.24.0.
2022-11-24 12:31:53 +01:00
zimoun
ba535c8148
gnu: r-gdsfmt: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-gdsfmt): Update to 1.34.0.
2022-11-24 12:31:52 +01:00
zimoun
1d03230dc8
gnu: r-watermelon: Update to 2.4.0.
* gnu/packages/bioconductor.scm (r-watermelon): Update to 2.4.0.
2022-11-24 12:31:52 +01:00
zimoun
d29b13e9be
gnu: r-roc: Update to 1.74.0.
* gnu/packages/bioconductor.scm (r-roc): Update to 1.74.0.
2022-11-24 12:31:52 +01:00
zimoun
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gnu: r-genie3: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-genie3): Update to 1.20.0.
2022-11-24 12:31:52 +01:00
zimoun
a6580915af
gnu: r-circrnaprofiler: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-circrnaprofiler): Update to 1.12.0.
2022-11-24 12:31:52 +01:00
zimoun
5adc9823f8
gnu: r-cicero: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-cicero): Update to 1.16.0.
2022-11-24 12:31:52 +01:00
zimoun
355400fff2
gnu: r-chicago: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-chicago): Update to 1.26.0.
2022-11-24 12:31:52 +01:00
zimoun
3857d2dd8d
gnu: r-rcistarget: Update to 1.17.0.
* gnu/packages/bioconductor.scm (r-rcistarget): Update to 1.17.0.
2022-11-24 12:31:51 +01:00
zimoun
3073f30b07
gnu: r-depecher: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-depecher): Update to 1.14.0.
2022-11-24 12:31:51 +01:00
zimoun
f80ad8d51b
gnu: r-mixomics: Update to 6.22.0.
* gnu/packages/bioconductor.scm (r-mixomics): Update to 6.22.0.
2022-11-24 12:31:51 +01:00
zimoun
6741cfad7c
gnu: r-flowsom: Update to 2.6.0.
* gnu/packages/bioconductor.scm (r-flowsom): Update to 2.6.0.
2022-11-24 12:31:51 +01:00
zimoun
90be8abee6
gnu: r-cytoml: Update to 2.10.0.
* gnu/packages/bioconductor.scm (r-cytoml): Update to 2.10.0.
2022-11-24 12:31:51 +01:00
zimoun
522e1136b6
gnu: r-opencyto: Update to 2.10.0.
* gnu/packages/bioconductor.scm (r-opencyto): Update to 2.10.0.
2022-11-24 12:31:51 +01:00
zimoun
2061e5af92
gnu: r-flowstats: Update to 4.10.0.
* gnu/packages/bioconductor.scm (r-flowstats): Update to 4.10.0.
2022-11-24 12:31:51 +01:00
zimoun
8a089e4e11
gnu: r-flowworkspace: Update to 4.10.0.
* gnu/packages/bioconductor.scm (r-flowworkspace): Update to 4.10.0.
2022-11-24 12:31:50 +01:00
zimoun
d029859dd2
gnu: r-rprotobuflib: Update to 2.10.0.
* gnu/packages/bioconductor.scm (r-rprotobuflib): Update to 2.10.0.
2022-11-24 12:31:50 +01:00
zimoun
223fb32492
gnu: r-flowclust: Update to 3.36.0.
* gnu/packages/bioconductor.scm (r-flowclust): Update to 3.36.0.
2022-11-24 12:31:50 +01:00
zimoun
22f8c5350e
gnu: r-flowviz: Update to 1.62.0.
* gnu/packages/bioconductor.scm (r-flowviz): Update to 1.62.0.
2022-11-24 12:31:50 +01:00
zimoun
ffe3bfa1ba
gnu: r-ggcyto: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-ggcyto): Update to 1.26.0.
2022-11-24 12:31:50 +01:00
zimoun
a87bcca9f2
gnu: r-ncdfflow: Update to 2.44.0.
* gnu/packages/bioconductor.scm (r-ncdfflow): Update to 2.44.0.
2022-11-24 12:31:50 +01:00
zimoun
59a3f6df90
gnu: r-flowmeans: Update to 1.58.0.
* gnu/packages/bioconductor.scm (r-flowmeans): Update to 1.58.0.
2022-11-24 12:31:49 +01:00
zimoun
c5130dfef1
gnu: r-flowcore: Update to 2.10.0.
* gnu/packages/bioconductor.scm (r-flowcore): Update to 2.10.0.
[propagated-inputs]: Remove r-rcpparmadillo; add r-cpp11.
2022-11-24 12:31:49 +01:00
zimoun
e6dc952cbb
gnu: r-cytolib: Update to 2.10.0.
* gnu/packages/bioconductor.scm (r-cytolib): Update to 2.10.0.
2022-11-24 12:31:49 +01:00
zimoun
944e48a861
gnu: r-consensusclusterplus: Update to 1.62.0.
* gnu/packages/bioconductor.scm (r-consensusclusterplus): Update to 1.62.0.
2022-11-24 12:31:49 +01:00
zimoun
9c3506a26c
gnu: r-rsubread: Update to 2.12.0.
* gnu/packages/bioconductor.scm (r-rsubread): Update to 2.12.0.
2022-11-24 12:31:49 +01:00
zimoun
2aaa3f4414
gnu: r-annotatr: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-annotatr): Update to 1.24.0.
2022-11-24 12:31:49 +01:00
zimoun
254acb7ddc
gnu: r-biosigner: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-biosigner): Update to 1.26.0.
2022-11-24 12:31:49 +01:00
zimoun
8772941e80
gnu: r-ropls: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-ropls): Update to 1.30.0.
[propagated-inputs]: Add r-plotly and r-ggplot2.
2022-11-24 12:31:48 +01:00
zimoun
812fd22ad3
gnu: r-multidataset: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-multidataset): Update to 1.26.0.
2022-11-24 12:31:48 +01:00
zimoun
df921b1f69
gnu: r-birewire: Update to 3.30.0.
* gnu/packages/bioconductor.scm (r-birewire): Update to 3.30.0.
2022-11-24 12:31:48 +01:00
zimoun
afd5dfff03
gnu: r-rqc: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-rqc): Update to 1.32.0.
2022-11-24 12:31:48 +01:00
zimoun
1a99e38e8d
gnu: r-quasr: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-quasr): Update to 1.38.0.
2022-11-24 12:31:48 +01:00
zimoun
a9dd4f8bd6
gnu: r-rhisat2: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-rhisat2): Update to 1.14.0.
2022-11-24 12:31:48 +01:00
zimoun
41e534e93a
gnu: r-sgseq: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-sgseq): Update to 1.32.0.
2022-11-24 12:31:48 +01:00
zimoun
0f6cd30c7a
gnu: r-rbowtie: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-rbowtie): Update to 1.38.0.
2022-11-24 12:31:48 +01:00
zimoun
b35b27b983
gnu: r-iclusterplus: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-iclusterplus): Update to 1.34.0.
2022-11-24 12:31:47 +01:00
zimoun
43b69b74d3
gnu: r-biocfilecache: Update to 2.6.0.
* gnu/packages/bioconductor.scm (r-biocfilecache): Update to 2.6.0.
2022-11-24 12:31:47 +01:00
zimoun
628ce9bf48
gnu: r-arrmnormalization: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-arrmnormalization): Update to 1.38.0.
2022-11-24 12:31:47 +01:00
zimoun
471040c5d1
gnu: r-progeny: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-progeny): Update to 1.20.0.
2022-11-24 12:31:47 +01:00
zimoun
42e093c575
gnu: r-rbowtie2: Update to 2.4.0.
* gnu/packages/bioconductor.scm (r-rbowtie2): Update to 2.4.0.
2022-11-24 12:31:47 +01:00
zimoun
f16c7d46cc
gnu: r-zfpkm: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-zfpkm): Update to 1.20.0.
2022-11-24 12:31:47 +01:00
zimoun
70e32fd0bf
gnu: r-zinbwave: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-zinbwave): Update to 1.20.0.
2022-11-24 12:31:47 +01:00
zimoun
36edd2b288
gnu: r-webbioc: Update to 1.70.0.
* gnu/packages/bioconductor.scm (r-webbioc): Update to 1.70.0.
2022-11-24 12:31:47 +01:00
zimoun
75ca7d19fd
gnu: r-widgettools: Update to 1.76.0.
* gnu/packages/bioconductor.scm (r-widgettools): Update to 1.76.0.
2022-11-24 12:31:46 +01:00
zimoun
57fec18eae
gnu: r-wiggleplotr: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-wiggleplotr): Update to 1.22.0.
2022-11-24 12:31:46 +01:00
zimoun
c7c004c36e
gnu: r-wrench: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-wrench): Update to 1.16.0.
2022-11-24 12:31:46 +01:00
zimoun
9daff45146
gnu: r-wppi: Update to 1.6.0.
* gnu/packages/bioconductor.scm (r-wppi): Update to 1.6.0.
2022-11-24 12:31:46 +01:00
zimoun
bcc13d3642
gnu: r-xcms: Update to 3.20.0.
* gnu/packages/bioconductor.scm (r-xcms): Update to 3.20.0.
2022-11-24 12:31:46 +01:00
zimoun
61edc0f206
gnu: r-massspecwavelet: Update to 1.64.0.
* gnu/packages/bioconductor.scm (r-massspecwavelet): Update to 1.64.0.
2022-11-24 12:31:46 +01:00
zimoun
275fda864a
gnu: r-roar: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-roar): Update to 1.34.0.
2022-11-24 12:31:46 +01:00