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Author SHA1 Message Date
Michael Rohleder
81ba7e6a45
gnu: mousepad: Update to 0.5.9. 
* gnu/packages/xfce.scm (mousepad): Update to 0.5.9.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-04-18 23:08:11 +02:00
Michael Rohleder
355982a3f5
gnu: orage: Update to 4.16.0. 
* gnu/packages/xfce.scm (orage): Update to 4.16.0.
[arguments]: Remove unneeded phase fix-build-with-libical3.
[native-inputs]: Add glib:bin for dbus-binding-tool.
[inputs]: Add dbus-glib for dbus support, libxfce4ui.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-04-18 23:07:55 +02:00
Felix Gruber
617d8a836f
gnu: Remove python-pyyaml-for-awscli. 
* gnu/packages/python-xyz.scm (python-pyyaml-for-awscli): Remove
  variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-04-18 23:02:39 +02:00
Felix Gruber
4810100db6
gnu: Remove python-botocore-for-awscli. 
* gnu/packages/python-xyz.scm (python-botocore-for-awscli): Remove
  variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-04-18 23:02:35 +02:00
Felix Gruber
7cf080aa71
gnu: awscli: Update to 1.22.90. 
* gnu/packages/python-web.scm (awscli): Update to 1.22.90.
[arguments] Use search-input-file to find groff.
[inputs]: Replace python-botocore-for-awscli with python-botocore.
Add groff.
[native-inputs]: Remove groff.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-04-18 23:02:29 +02:00
Felix Gruber
b0ec23afb7
gnu: python-jmespath: Update to 1.0.0. 
* gnu/packages/python-xyz.scm (python-jmespath): Update to 1.0.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-04-18 23:02:23 +02:00
Ludovic Courtès
5389c5ea57
gnu: nss-certs: Support cross-compilation. 
Reported by phodina <phodina@protonmail.com>.

* gnu/packages/certs.scm (nss-certs)[arguments]: In 'install' phase, do
not refer to '%output' when cross-compiling.
 2022-04-18 22:58:06 +02:00
Petr Hodina
902099a8c0
gnu: ntp: Support cross-compilation. 
* gnu/packages/ntp.scm (ntp)[arguments]: Add configuration flag.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2022-04-18 22:57:18 +02:00
Danny Milosavljevic
237d90a780
gnu: openjdk17: Make big cursors work. 
* gnu/packages/java.scm (openjdk17)[source]: Add patch.
 2022-04-18 12:59:04 +02:00
Danny Milosavljevic
aa01b37ef6
gnu: openjdk16: Make big cursors work. 
* gnu/packages/java.scm (openjdk16)[source]: Add patch.
 2022-04-18 12:59:04 +02:00
Danny Milosavljevic
f4dd7bf94e
gnu: openjdk15: Make big cursors work. 
* gnu/packages/patches/openjdk-15-xcursor-no-dynamic.patch: New file.
* gnu/local.mk (dist_patch_DATA):  Add it.
* gnu/packages/java.scm (openjdk15)[source]: Add it.
 2022-04-18 12:58:57 +02:00
jgart
b629b30269
gnu: Add cl-ipfs-api2. 
* gnu/packages/lisp-xyz.scm (cl-ipfs-api2, ecl-cl-ipfs-api2,
  sbcl-cl-ipfs-api2): New variables.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2022-04-18 09:26:36 +02:00
Leo Famulari
31f42393e8
gnu: Mutt: Update to 2.2.3 [fixes CVE-2022-1328]. 
https://gitlab.com/muttmua/mutt/-/issues/404

* gnu/packages/mail.scm (mutt): Update to 2.2.3.
 2022-04-18 00:24:01 -04:00
Greg Hogan
93f0b31a99
gnu: ccache: Update to 4.6. 
* gnu/packages/ccache.scm (ccache): Update to 4.6.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2022-04-17 17:59:23 +03:00
Raghav Gururajan
e5174200c4
gnu: gnucash: Update to 4.10. 
Variables gnucash and gnucash-docs have to be updated together.

* gnu/packages/gnucash.scm (gnucash)[version]: Update to 4.10.
(gnucash-docs)[version]: Update to 4.10.
[build-system]: Migrate from gnu to cmake.
[arguments]: Disable tests.
 2022-04-17 05:03:00 -04:00
Leo Famulari
0c89fe9e17
gnu: linux-libre 4.19: Update to 4.19.238. 
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.238.
(linux-libre-4.19-pristine-source): Update hash.
 2022-04-16 11:27:50 -04:00
Leo Famulari
d5adbf6c9f
gnu: linux-libre 5.4: Update to 5.4.189. 
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.189.
(linux-libre-5.4-pristine-source): Update hash.
 2022-04-16 11:27:44 -04:00
Guillaume Le Vaillant
7eb9176a6e
gnu: bitcoin-unlimited: Update to 1.10.0.0. 
* gnu/packages/finance.scm (bitcoin-unlimited): Update to 1.10.0.0.
  [arguments]: Update 'fix-tests' phase.
 2022-04-16 11:49:48 +02:00
Guillaume Le Vaillant
4bd3fdda63
gnu: electrum: Update to 4.2.1. 
* gnu/packages/finance.scm (electrum): Update to 4.2.1.
  [inputs]: Replace python-aiorpcx-0.18 by python-aiorpcx. Add zbar.
 2022-04-16 11:26:48 +02:00
Guillaume Le Vaillant
6be6ea4276
gnu: electron-cash: Update to 4.2.7. 
* gnu/packages/finance.scm (electron-cash): Update to 4.2.7.
 2022-04-16 11:12:17 +02:00
Dominic Martinez
6db5787120
gnu: emacs-message-view-patch: Update to 0.2.0-40bc2e5 
* gnu/packages/emacs-xyz (emacs-message-view-patch): Update it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-04-15 19:13:03 +02:00
Dominic Martinez
c6c0c985d3
gnu: emacs-mu4e-patch: Rename to emacs-message-view-patch 
The name was changed upstream to reflect that this extension works for both
mu4e and gnus.

* gnu/packages/emacs-xyz.scm (emacs-mu4e-patch): Deprecate it.
(emacs-message-view-patch): Renamed from emacs-mu4e-patch. Description,
synopsis, and inputs adjusted to reflect that mu4e is not required.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-04-15 19:13:03 +02:00
Michael Rohleder
6995d68435
gnu: xfce4-diskperf-plugin: Update to 2.7.0. 
* gnu/packages/xfce.scm (xfce4-diskperf-plugin): Update to 2.7.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-04-15 19:13:03 +02:00
Michael Rohleder
3b2ea81894
gnu: elementary-xfce-icon-theme: Update to 0.16. 
* gnu/packages/xfce.scm (elementary-xfce-icon-theme): Update to 0.16.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-04-15 19:13:02 +02:00
Zhu Zihao
0495819926
gnu: xfce4-terminal: Update to 1.0.0. 
* gnu/packages/xfce.scm (xfce4-terminal): Update to 1.0.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-04-15 19:13:02 +02:00
Vincent Prat
4ed02d571a
gnu: Add python-verspec. 
* gnu/packages/python.xyz.scm (python-verspec): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-04-15 19:13:02 +02:00
Vincent Prat
304c6b395c
gnu: Add python-shtab. 
* gnu/packages/python-xyz.scm (python-shtab): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-04-15 19:13:02 +02:00
Ludovic Courtès
6e174c4edd
gnu: shepherd: Support cross-compilation. 
Reported by phodina <phodina@protonmail.com>.

* gnu/packages/admin.scm (shepherd-0.9)[arguments]: New field.
[native-inputs]: Add GUILE-FIBERS-1.1.
 2022-04-15 19:13:02 +02:00
B. Wilson
35a1de1a4c
gnu: mblaze: Offer contrib executables. 
* gnu/packages/mail.scm (mblaze)[outputs, inputs]: New fields.
[arguments]: Add #:modules.  Add 'install-contrib' phase.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-04-15 19:13:02 +02:00
Chadwain Holness
ff3355dcbf
gnu: streamlink: Update to 3.2.0. 
* gnu/packages/video.scm (streamlink): Update to 3.2.0.
[inputs]: Add python-lxml and python-pycountry, remove python-iso3166 and python-iso639.
[arguments]<#:phases>{check}: Use pytest.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2022-04-15 19:13:01 +02:00
Ludovic Courtès
ee617c4800
gnu: python-lxml: Add 4.7.1. 
* gnu/packages/xml.scm (python-lxml-4.7): New variable.
 2022-04-15 19:13:01 +02:00
André A. Gomes
179a949e60
gnu: cl-nfiles: Update to 0.4.0. 
* gnu/packages/lisp-xyz.scm (sbcl-nfiles): Update to 0.4.0.
  [inputs]: Add sbcl-quri.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2022-04-15 17:09:03 +02:00
Efraim Flashner
53a8e8fd6c
gnu: python-hmmlearn: Remove cythonized file. 
* gnu/packages/machine-learning.scm (python-hmmlearn)[source]: Add
snippet to remove cythonized file.
 2022-04-15 02:11:03 +03:00
Efraim Flashner
ac5f070631
gnu: python-aiohttp: Remove cythonized files. 
* gnu/packages/python-web.scm (python-aiohttp)[source]: Add snippet to
remove cythonized files.
 2022-04-14 23:30:27 +03:00
Efraim Flashner
802c94034c
gnu: python-pywavelets: Remove cythonized files. 
* gnu/packages/python-xyz.scm (python-pywavelets)[source]: Add snippet
to remove cythonized files.
[native-inputs]: Add python-cython.
 2022-04-14 23:23:18 +03:00
Efraim Flashner
6083372f61
gnu: python-igraph: Update to 0.9.10. 
* gnu/packages/graph.scm (python-igraph): Update to 0.9.10.
 2022-04-14 22:57:49 +03:00
Efraim Flashner
d6a5bdf000
gnu: igraph: Update to 0.9.8. 
* gnu/packages/graph.scm (igraph): Update to 0.9.8.
 2022-04-14 22:57:06 +03:00
Efraim Flashner
7034746e15
gnu: scregseg: Remove cythonized file. 
* gnu/packages/bioinformatics.scm (scregseg)[source]: Add snippet to
remove cythonized file.
 2022-04-14 22:55:33 +03:00
Paul A. Patience
5059e7f01e
gnu: cl-py4cl: Update to 0.0.0-1.2f2a008. 
* gnu/packages/lisp-xyz.scm (sbcl-py4cl): Update to 0.0.0-1.2f2a008.
  [arguments]<#:phases>: Adjust substitutions to renamed files.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2022-04-14 20:31:59 +02:00
jgart
8f5b2f0693
gnu: Add emacs-org-modern. 
* gnu/packages/emacs-xyz.scm (emacs-org-modern): New variable.

Signed-off-by: Raghav Gururajan <rg@raghavgururajan.name>
 2022-04-14 11:34:03 -04:00
Paul A. Patience
0ddca9d682
gnu: Add cl-numpy-file-format. 
* gnu/packages/lisp-xyz.scm (cl-numpy-file-format, ecl-numpy-file-format,
  sbcl-numpy-file-format): New variables.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2022-04-14 16:33:52 +02:00
Foo Chuan Wei
0f6aaf2f62
gnu: cl-who: Update to 1.1.4-3.07dafe9. 
* gnu/packages/lisp-xyz.scm (sbcl-cl-who): Update to 1.1.4-3.07dafe9.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2022-04-14 16:33:52 +02:00
Leo Famulari
6bf6529792
gnu: linux-libre 5.10: Update to 5.10.111. 
* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.111.
(linux-libre-5.10-pristine-source): Update hash.
 2022-04-14 10:22:54 -04:00
Leo Famulari
0b20c8e071
gnu: linux-libre 5.15: Update to 5.15.34. 
* gnu/packages/linux.scm (linux-libre-5.15-version): Update to 5.15.34.
(linux-libre-5.15-pristine-source): Update hash.
 2022-04-14 10:22:54 -04:00
Leo Famulari
1b7f05f72c
gnu: linux-libre: Update to 5.16.20. 
* gnu/packages/linux.scm (linux-libre-5.16-version): Update to 5.16.20.
(linux-libre-5.16-pristine-source): Update hash.
 2022-04-14 10:22:54 -04:00
Leo Famulari
0a3fee824b
gnu: linux-libre 5.17: Update to 5.17.3. 
* gnu/packages/linux.scm (linux-libre-5.17-version): Update to 5.17.3.
(linux-libre-5.17-pristine-source): Update hash.
 2022-04-14 10:22:54 -04:00
Leo Famulari
aaf4b08c6b
gnu: Update linux-libre 5.17 configuration files. 
This option that adds new hardware support appeared after the 5.17 release.

* gnu/packages/aux-files/linux-libre/5.17-arm.conf,
gnu/packages/aux-files/linux-libre/5.17-arm64.conf,
gnu/packages/aux-files/linux-libre/5.17-i686.conf,
gnu/packages/aux-files/linux-libre/5.17-x86_64.conf: Enable support for Realtek
Ethernet switch chips.
 2022-04-14 10:22:54 -04:00
Mădălin Ionel Patrașcu
b0dd06bd0c
gnu: Add r-xcir. 
* gnu/packages/bioconductor.scm (r-xcir): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2022-04-14 14:53:17 +02:00
Ludovic Courtès
16372cb347
gnu: sundials: Remove input labels. 
* gnu/packages/maths.scm (sundials)[native-inputs, inputs]: Remove labels.
(sundials-openmpi)[inputs]: Remove labels.
 2022-04-14 14:48:21 +02:00
Ludovic Courtès
61bcd648ca
gnu: sundials: Update to 6.1.1. 
* gnu/packages/maths.scm (sundials): Update to 6.1.1.
[inputs]: Add PETSC.
(sundials-openmpi)[inputs]: Remove PETSC.
[arguments]: Remove now unnecessary flags.  Change "MPI_ENABLE" to "ENABLE_MPI".
 2022-04-14 14:48:21 +02:00
Ludovic Courtès
1f82602153
gnu: guile-fibers@1.1: Support cross-compilation. 
Fixes <https://issues.guix.gnu.org/54793>.
Reported by Mathieu Othacehe <othacehe@gnu.org>.

* gnu/packages/guile-xyz.scm (guile-fibers-1.1)[arguments]: Add
'support-cross-compilation' phase.
 2022-04-14 14:48:20 +02:00
Ricardo Wurmus
919cecd00b
gnu: r-illuminahumanmethylation450kanno-ilmn12-hg19: Move to annotation section. 
* gnu/packages/bioconductor.scm (r-illuminahumanmethylation450kanno-ilmn12-hg19):
Move this variable up to the annotation section.
 2022-04-14 13:38:30 +02:00
Ricardo Wurmus
03009f2a2b
gnu: r-snplocs-hsapiens-dbsnp144-grch37: Move to annotation section. 
* gnu/packages/bioconductor.scm (r-snplocs-hsapiens-dbsnp144-grch37): Move
this variable up to the annotation section.
 2022-04-14 13:37:23 +02:00
Ricardo Wurmus
c8a6e4abbc
gnu: r-chromvarmotifs: Move to (gnu packages bioinformatics). 
* gnu/packages/bioconductor.scm (r-chromvarmotifs): Move this variable from here...
* gnu/packages/bioinformatics.scm (r-chromvarmotifs): ...to here.
 2022-04-14 13:35:22 +02:00
Ricardo Wurmus
aafd0d2309
gnu: r-absseq: Move out of experiments section. 
* gnu/packages/bioconductor.scm (r-absseq): Move definition out of experiments
section.
 2022-04-14 13:34:11 +02:00
Ricardo Wurmus
ed3697c040
gnu: r-abarray: Move out of experiments section. 
* gnu/packages/bioconductor.scm (r-abarray): Move definition out of
experiments section.
 2022-04-14 13:32:52 +02:00
Ricardo Wurmus
67941709e2
gnu: r-aneufinder: Move to packages section. 
* gnu/packages/bioconductor.scm (r-aneufinder): Move this definition out of
the section for Bioconductor experiments packages.
 2022-04-14 13:31:33 +02:00
Mădălin Ionel Patrașcu
cab6657094
gnu: Add r-absseq. 
* gnu/packages/bioconductor.scm (r-absseq): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2022-04-14 13:29:48 +02:00
Mădălin Ionel Patrașcu
a436582124
gnu: Add r-abarray. 
* gnu/packages/bioconductor.scm (r-abarray): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2022-04-14 13:20:07 +02:00
Mădălin Ionel Patrașcu
1b2b1c30e2
gnu: Add r-acde. 
* gnu/packages/bioconductor.scm (r-acde): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2022-04-14 13:18:07 +02:00
Mădălin Ionel Patrașcu
dd9d26bce6
gnu: Add r-wppi. 
* gnu/packages/bioconductor.scm (r-wppi): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2022-04-14 12:47:24 +02:00
Mădălin Ionel Patrașcu
55be5fc400
gnu: Add r-acme. 
* gnu/packages/bioconductor.scm (r-acme): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2022-04-14 12:33:27 +02:00
Mădălin Ionel Patrașcu
08df30f232
gnu: Add r-acgh. 
* gnu/packages/bioconductor.scm (r-acgh): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2022-04-14 11:59:15 +02:00
Attila Lendvai
50046194a2
gnu: libfprint: Fix build, add python for the tests. 
* gnu/packages/freedesktop.scm (libfprint)[native-inputs]: Add python-minimal
as it's needed by the tests.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2022-04-14 11:54:11 +02:00
Mădălin Ionel Patrașcu
839241501a
gnu: Add r-ace. 
* gnu/packages/bioconductor.scm (r-ace): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2022-04-14 11:50:34 +02:00
Mădălin Ionel Patrașcu
7d990e775e
gnu: r-catalyst: Update description. 
* gnu/packages/bioconductor.scm (r-catalyst)[description]: Add Texinfo markup
and clarify a sentence.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2022-04-14 11:43:24 +02:00
Ricardo Wurmus
d85146c9df
gnu: r-tcgabiolinks: Update to 2.22.4. 
* gnu/packages/bioconductor.scm (r-tcgabiolinks): Update to 2.22.4.
 2022-04-14 11:29:40 +02:00
Ricardo Wurmus
5acc125305
gnu: r-omnipathr: Update to 3.2.8. 
* gnu/packages/bioconductor.scm (r-omnipathr): Update to 3.2.8.
 2022-04-14 11:29:40 +02:00
Ricardo Wurmus
2def20d3ae
gnu: r-bgeedb: Update to 2.20.1. 
* gnu/packages/bioconductor.scm (r-bgeedb): Update to 2.20.1.
 2022-04-14 11:29:40 +02:00
Ricardo Wurmus
c7cb92e494
gnu: r-gviz: Update to 1.38.4. 
* gnu/packages/bioconductor.scm (r-gviz): Update to 1.38.4.
 2022-04-14 11:29:40 +02:00
Ricardo Wurmus
3c7e190eea
gnu: r-catalyst: Update to 1.18.1. 
* gnu/packages/bioconductor.scm (r-catalyst): Update to 1.18.1.
 2022-04-14 11:29:40 +02:00
Ricardo Wurmus
3e07fbf32a
gnu: r-mscoreutils: Update to 1.6.2. 
* gnu/packages/bioconductor.scm (r-mscoreutils): Update to 1.6.2.
 2022-04-14 11:29:40 +02:00
Ricardo Wurmus
40735701a8
gnu: r-singler: Update to 1.8.1. 
* gnu/packages/bioconductor.scm (r-singler): Update to 1.8.1.
 2022-04-14 11:29:40 +02:00
Ricardo Wurmus
2a71a7b961
gnu: r-s4vectors: Update to 0.32.4. 
* gnu/packages/bioconductor.scm (r-s4vectors): Update to 0.32.4.
 2022-04-14 11:29:40 +02:00
Ricardo Wurmus
51ddaf48e8
gnu: r-experimenthub: Update to 2.2.1. 
* gnu/packages/bioconductor.scm (r-experimenthub): Update to 2.2.1.
 2022-04-14 11:29:39 +02:00
Ricardo Wurmus
c9e925d444
gnu: r-universalmotif: Update to 1.12.4. 
* gnu/packages/bioconductor.scm (r-universalmotif): Update to 1.12.4.
 2022-04-14 11:29:39 +02:00
Ricardo Wurmus
eadb1f53e9
gnu: r-variancepartition: Update to 1.24.1. 
* gnu/packages/bioconductor.scm (r-variancepartition): Update to 1.24.1.
[propagated-inputs]: Add r-aod, r-rdpack, and r-rhpcblasctl.
 2022-04-14 11:29:39 +02:00
Ricardo Wurmus
9950ed71fc
gnu: r-cytolib: Update to 2.6.2. 
* gnu/packages/bioconductor.scm (r-cytolib): Update to 2.6.2.
 2022-04-14 11:29:39 +02:00
Ricardo Wurmus
0861d4fff5
gnu: r-rsubread: Update to 2.8.2. 
* gnu/packages/bioconductor.scm (r-rsubread): Update to 2.8.2.
 2022-04-14 11:29:39 +02:00
Ricardo Wurmus
cb30400097
gnu: r-ropls: Update to 1.26.4. 
* gnu/packages/bioconductor.scm (r-ropls): Update to 1.26.4.
 2022-04-14 11:29:39 +02:00
Ricardo Wurmus
0c478f50f2
gnu: r-birewire: Update to 3.26.5. 
* gnu/packages/bioconductor.scm (r-birewire): Update to 3.26.5.
[propagated-inputs]: Remove r-tsne; add r-rtsne.
 2022-04-14 11:29:39 +02:00
Ricardo Wurmus
b446be46ba
gnu: r-biocfilecache: Update to 2.2.1. 
* gnu/packages/bioconductor.scm (r-biocfilecache): Update to 2.2.1.
 2022-04-14 11:29:39 +02:00
Ricardo Wurmus
5576a98b6a
gnu: r-massspecwavelet: Update to 1.60.1. 
* gnu/packages/bioconductor.scm (r-massspecwavelet): Update to 1.60.1.
 2022-04-14 11:29:39 +02:00
Ricardo Wurmus
6f2d89fb40
gnu: r-atacseqqc: Update to 1.18.1. 
* gnu/packages/bioconductor.scm (r-atacseqqc): Update to 1.18.1.
 2022-04-14 11:29:39 +02:00
Ricardo Wurmus
88ed3fc340
gnu: r-genomicscores: Update to 2.6.1. 
* gnu/packages/bioconductor.scm (r-genomicscores): Update to 2.6.1.
 2022-04-14 11:29:39 +02:00
Ricardo Wurmus
e129f579f5
gnu: r-clusterprofiler: Update to 4.2.2. 
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 4.2.2.
 2022-04-14 11:29:39 +02:00
Ricardo Wurmus
21037105ac
gnu: r-enrichplot: Update to 1.14.2. 
* gnu/packages/bioconductor.scm (r-enrichplot): Update to 1.14.2.
 2022-04-14 11:29:38 +02:00
Ricardo Wurmus
f8a38e8380
gnu: r-geoquery: Update to 2.62.2. 
* gnu/packages/bioconductor.scm (r-geoquery): Update to 2.62.2.
 2022-04-14 11:29:38 +02:00
Ricardo Wurmus
fe6a8b4338
gnu: r-karyoploter: Update to 1.20.3. 
* gnu/packages/bioconductor.scm (r-karyoploter): Update to 1.20.3.
 2022-04-14 11:29:38 +02:00
Ricardo Wurmus
84c0ec875c
gnu: r-destiny: Update to 3.8.1. 
* gnu/packages/bioconductor.scm (r-destiny): Update to 3.8.1.
[native-inputs]: Add r-knitr.
 2022-04-14 11:29:38 +02:00
Ricardo Wurmus
d625f52bca
gnu: r-chippeakanno: Update to 3.28.1. 
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.28.1.
 2022-04-14 11:29:38 +02:00
Ricardo Wurmus
f7d7ba3613
gnu: r-diffbind: Update to 3.4.11. 
* gnu/packages/bioconductor.scm (r-diffbind): Update to 3.4.11.
 2022-04-14 11:29:38 +02:00
Ricardo Wurmus
cf46f2c331
gnu: r-systempiper: Update to 2.0.8. 
* gnu/packages/bioconductor.scm (r-systempiper): Update to 2.0.8.
 2022-04-14 11:29:38 +02:00
Ricardo Wurmus
43053e08da
gnu: r-stringdb: Update to 2.6.5. 
* gnu/packages/bioconductor.scm (r-stringdb): Update to 2.6.5.
 2022-04-14 11:29:38 +02:00
Ricardo Wurmus
a3ddba54fd
gnu: r-slingshot: Update to 2.2.1. 
* gnu/packages/bioconductor.scm (r-slingshot): Update to 2.2.1.
 2022-04-14 11:29:38 +02:00
Ricardo Wurmus
6dad28d221
gnu: r-rhdf5: Update to 2.38.1. 
* gnu/packages/bioconductor.scm (r-rhdf5): Update to 2.38.1.
 2022-04-14 11:29:38 +02:00
Ricardo Wurmus
30027f837d
gnu: r-regioner: Update to 1.26.1. 
* gnu/packages/bioconductor.scm (r-regioner): Update to 1.26.1.
 2022-04-14 11:29:37 +02:00
Ricardo Wurmus
06d13cf4b0
gnu: r-msnbase: Update to 2.20.4. 
* gnu/packages/bioconductor.scm (r-msnbase): Update to 2.20.4.
 2022-04-14 11:29:37 +02:00
Ricardo Wurmus
e586613384
gnu: r-mutationalpatterns: Update to 3.4.1. 
* gnu/packages/bioconductor.scm (r-mutationalpatterns): Update to 3.4.1.
 2022-04-14 11:29:37 +02:00
Ricardo Wurmus
78f7de977a
gnu: r-limma: Update to 3.50.3. 
* gnu/packages/bioconductor.scm (r-limma): Update to 3.50.3.
 2022-04-14 11:29:37 +02:00