Commit Graph

2002 Commits

Author SHA1 Message Date
Ricardo Wurmus
bcbd8b7921
gnu: Add r-mus-musculus.
* gnu/packages/bioconductor.scm (r-mus-musculus): New variable.
2021-09-07 14:47:56 +02:00
Ricardo Wurmus
aed1504837
gnu: Add r-biomformat.
* gnu/packages/bioconductor.scm (r-biomformat): New variable.
2021-09-07 12:16:47 +02:00
Ricardo Wurmus
48e300bd3f
gnu: Add r-biodb.
* gnu/packages/bioconductor.scm (r-biodb): New variable.
2021-09-07 12:16:41 +02:00
Ricardo Wurmus
2c8e3595e3
gnu: Add r-biocdockermanager.
* gnu/packages/bioconductor.scm (r-biocdockermanager): New variable.
2021-09-07 12:16:33 +02:00
Ricardo Wurmus
7ca0a0f0e7
gnu: Add r-biocthis.
* gnu/packages/bioconductor.scm (r-biocthis): New variable.
2021-09-07 12:08:17 +02:00
Ricardo Wurmus
fd5372e40f
gnu: Add r-basilisk.
* gnu/packages/bioconductor.scm (r-basilisk): New variable.
2021-09-07 12:08:13 +02:00
Ricardo Wurmus
dde984ca19
gnu: Add r-basilisk-utils.
* gnu/packages/bioconductor.scm (r-basilisk-utils): New variable.
2021-09-07 12:08:06 +02:00
Ricardo Wurmus
c9d545ab01
gnu: Add r-dir-expiry.
* gnu/packages/bioconductor.scm (r-dir-expiry): New variable.
2021-09-07 12:07:59 +02:00
Ricardo Wurmus
b76b47ebe4
gnu: Add r-genetclassifier.
* gnu/packages/bioconductor.scm (r-genetclassifier): New variable.
2021-09-07 12:01:25 +02:00
Ricardo Wurmus
e43c6d2e4a
gnu: Add r-minet.
* gnu/packages/bioconductor.scm (r-minet): New variable.
2021-09-07 12:01:16 +02:00
Ricardo Wurmus
5143f3852d
gnu: Add r-biobtreer.
* gnu/packages/bioconductor.scm (r-biobtreer): New variable.
2021-09-07 12:01:10 +02:00
Ricardo Wurmus
a59aee1330
gnu: Add r-bgeedb.
* gnu/packages/bioconductor.scm (r-bgeedb): New variable.
2021-09-07 12:01:03 +02:00
Ricardo Wurmus
26da032d5b
gnu: Add r-org-bt-eg-db.
* gnu/packages/bioconductor.scm (r-org-bt-eg-db): New variable.
2021-09-07 12:00:53 +02:00
Ricardo Wurmus
af81591375
gnu: Add r-bgeecall.
* gnu/packages/bioconductor.scm (r-bgeecall): New variable.
2021-09-07 11:44:33 +02:00
Ricardo Wurmus
62381dce86
gnu: Add r-beclear.
* gnu/packages/bioconductor.scm (r-beclear): New variable.
2021-09-07 11:44:33 +02:00
Ricardo Wurmus
816d52ba93
gnu: Add r-megadepth.
* gnu/packages/bioconductor.scm (r-megadepth): New variable.
2021-09-06 14:48:24 +02:00
Ricardo Wurmus
2f16659b40
gnu: Add r-ballgown.
* gnu/packages/bioconductor.scm (r-ballgown): New variable.
2021-08-25 12:30:33 +02:00
Ricardo Wurmus
68b22a8541
gnu: r-delayedmatrixstats: Update to 1.14.2.
* gnu/packages/bioconductor.scm (r-delayedmatrixstats): Update to 1.14.2.
2021-08-24 12:28:13 +02:00
Ricardo Wurmus
26d6db11f0
gnu: r-sparsematrixstats: Update to 1.4.2.
* gnu/packages/bioconductor.scm (r-sparsematrixstats): Update to 1.4.2.
2021-08-24 12:28:13 +02:00
Ricardo Wurmus
b2316605e2
gnu: r-scuttle: Update to 1.2.1.
* gnu/packages/bioconductor.scm (r-scuttle): Update to 1.2.1.
2021-08-24 12:28:13 +02:00
Ricardo Wurmus
2897ad3178
gnu: r-beachmat: Update to 2.8.1.
* gnu/packages/bioconductor.scm (r-beachmat): Update to 2.8.1.
2021-08-24 12:28:13 +02:00
Ricardo Wurmus
da7e7c9de8
gnu: r-biocset: Update to 1.6.1.
* gnu/packages/bioconductor.scm (r-biocset): Update to 1.6.1.
2021-08-24 12:28:13 +02:00
Ricardo Wurmus
9ff9a4756d
gnu: r-universalmotif: Update to 1.10.2.
* gnu/packages/bioconductor.scm (r-universalmotif): Update to 1.10.2.
2021-08-24 12:28:13 +02:00
Ricardo Wurmus
0022f40462
gnu: r-clusterprofiler: Update to 4.0.4.
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 4.0.4.
2021-08-24 12:28:13 +02:00
Ricardo Wurmus
5543456ae9
gnu: r-dose: Update to 3.18.2.
* gnu/packages/bioconductor.scm (r-dose): Update to 3.18.2.
2021-08-24 12:28:13 +02:00
Ricardo Wurmus
1c23b99a3c
gnu: r-batchelor: Update to 1.8.1.
* gnu/packages/bioconductor.scm (r-batchelor): Update to 1.8.1.
2021-08-24 12:28:12 +02:00
Ricardo Wurmus
82d6774757
gnu: r-ggtree: Update to 3.0.3.
* gnu/packages/bioconductor.scm (r-ggtree): Update to 3.0.3.
2021-08-24 12:28:12 +02:00
Ricardo Wurmus
e4ad91eb3e
gnu: r-treeio: Update to 1.16.2.
* gnu/packages/bioconductor.scm (r-treeio): Update to 1.16.2.
2021-08-24 12:28:12 +02:00
Ricardo Wurmus
917f0def66
gnu: r-matrixgenerics: Update to 1.4.2.
* gnu/packages/bioconductor.scm (r-matrixgenerics): Update to 1.4.2.
2021-08-24 12:28:12 +02:00
Ricardo Wurmus
3ef4c12a49
gnu: r-chippeakanno: Update to 3.26.3.
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.26.3.
2021-08-24 12:28:12 +02:00
Ricardo Wurmus
33fedd371a
gnu: r-diffbind: Update to 3.2.5.
* gnu/packages/bioconductor.scm (r-diffbind): Update to 3.2.5.
2021-08-24 12:28:12 +02:00
Ricardo Wurmus
514454cc8f
gnu: r-structuralvariantannotation: Update to 1.8.2.
* gnu/packages/bioconductor.scm (r-structuralvariantannotation): Update to 1.8.2.
[propagated-inputs]: Add r-genomeinfodb, r-iranges, r-s4vectors, and
r-summarizedexperiment.
2021-08-24 12:28:12 +02:00
Ricardo Wurmus
1920e567a7
gnu: r-rtracklayer: Update to 1.52.1.
* gnu/packages/bioconductor.scm (r-rtracklayer): Update to 1.52.1.
2021-08-24 12:28:12 +02:00
Ricardo Wurmus
495c50c68d
gnu: r-limma: Update to 3.48.3.
* gnu/packages/bioconductor.scm (r-limma): Update to 3.48.3.
2021-08-24 12:28:12 +02:00
Ricardo Wurmus
3277c4e749
gnu: r-genomicfeatures: Update to 1.44.1.
* gnu/packages/bioconductor.scm (r-genomicfeatures): Update to 1.44.1.
2021-08-24 12:28:12 +02:00
Ricardo Wurmus
8df84bedf7
gnu: r-ensembldb: Update to 2.16.4.
* gnu/packages/bioconductor.scm (r-ensembldb): Update to 2.16.4.
2021-08-24 12:28:12 +02:00
Ricardo Wurmus
e46cf457bb
gnu: r-biostrings: Update to 2.60.2.
* gnu/packages/bioconductor.scm (r-biostrings): Update to 2.60.2.
2021-08-24 12:28:12 +02:00
Ricardo Wurmus
227579e84a
gnu: r-biomart: Update to 2.48.3.
* gnu/packages/bioconductor.scm (r-biomart): Update to 2.48.3.
2021-08-24 12:28:12 +02:00
Ricardo Wurmus
1aceb93a6f
gnu: r-ldblock: Update to 1.22.1.
* gnu/packages/bioconductor.scm (r-ldblock): Update to 1.22.1.
2021-08-04 16:21:17 +02:00
Ricardo Wurmus
5909dd9e8e
gnu: r-roc: Update to 1.68.1.
* gnu/packages/bioconductor.scm (r-roc): Update to 1.68.1.
2021-08-04 16:21:16 +02:00
Ricardo Wurmus
b94c750e01
gnu: r-mixomics: Update to 6.16.3.
* gnu/packages/bioconductor.scm (r-mixomics): Update to 6.16.3.
2021-08-04 16:21:16 +02:00
Ricardo Wurmus
6da8e99c9c
gnu: r-gosemsim: Update to 2.18.1.
* gnu/packages/bioconductor.scm (r-gosemsim): Update to 2.18.1.
2021-08-04 16:21:12 +02:00
Ricardo Wurmus
75ec0fa243
gnu: Add r-tximeta.
* gnu/packages/bioconductor.scm (r-tximeta): New variable.
2021-08-04 13:04:04 +02:00
Ricardo Wurmus
ffb381856d
gnu: r-xcms: Update to 3.14.1.
* gnu/packages/bioconductor.scm (r-xcms): Update to 3.14.1.
2021-07-29 20:20:18 +02:00
Ricardo Wurmus
e06beb503c
gnu: r-reportingtools: Update to 2.32.1.
* gnu/packages/bioconductor.scm (r-reportingtools): Update to 2.32.1.
2021-07-29 20:20:15 +02:00
Ricardo Wurmus
a32241fcda
gnu: r-catalyst: Update to 1.16.2.
* gnu/packages/bioconductor.scm (r-catalyst): Update to 1.16.2.
2021-07-28 22:26:56 +02:00
Ricardo Wurmus
9d7eb480f8
gnu: r-mixomics: Update to 6.16.2.
* gnu/packages/bioconductor.scm (r-mixomics): Update to 6.16.2.
2021-07-28 22:26:56 +02:00
Ricardo Wurmus
d0d3637c92
gnu: r-rsubread: Update to 2.6.4.
* gnu/packages/bioconductor.scm (r-rsubread): Update to 2.6.4.
2021-07-28 22:26:56 +02:00
Ricardo Wurmus
8d9626dd7d
gnu: r-annotatr: Update to 1.18.1.
* gnu/packages/bioconductor.scm (r-annotatr): Update to 1.18.1.
2021-07-28 22:26:56 +02:00
Ricardo Wurmus
73fa220b43
gnu: r-motifbreakr: Update to 2.6.1.
* gnu/packages/bioconductor.scm (r-motifbreakr): Update to 2.6.1.
2021-07-28 22:26:55 +02:00
Ricardo Wurmus
336b110f69
gnu: r-scone: Update to 1.16.1.
* gnu/packages/bioconductor.scm (r-scone): Update to 1.16.1.
2021-07-28 22:26:55 +02:00
Ricardo Wurmus
fd0851ee97
gnu: r-chippeakanno: Update to 3.26.2.
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.26.2.
2021-07-28 22:26:55 +02:00
Ricardo Wurmus
acc62073be
gnu: r-ensembldb: Update to 2.16.3.
* gnu/packages/bioconductor.scm (r-ensembldb): Update to 2.16.3.
2021-07-28 22:26:55 +02:00
Tobias Geerinckx-Rice
5079aa2afd
gnu: r-structuralvariantannotation: Update to 1.8.1.
The previous 1.8.0 source tarball has vanished.

* gnu/packages/bioconductor.scm (r-structuralvariantannotation):
Update to 1.8.1.
[propagated-inputs]: Add r-genomicfeatures.
2021-07-25 19:39:11 +02:00
Ricardo Wurmus
4140b66837
gnu: r-gviz: Update to 1.36.2.
* gnu/packages/bioconductor.scm (r-gviz): Update to 1.36.2.
2021-07-10 21:35:29 +02:00
Ricardo Wurmus
564142d25e
gnu: r-catalyst: Update to 1.16.1.
* gnu/packages/bioconductor.scm (r-catalyst): Update to 1.16.1.
2021-07-10 21:35:29 +02:00
Ricardo Wurmus
c4ffceb0c2
gnu: r-rhdf5lib: Update to 1.14.2.
* gnu/packages/bioconductor.scm (r-rhdf5lib): Update to 1.14.2.
2021-07-10 21:35:29 +02:00
Ricardo Wurmus
e957d6c93b
gnu: r-bioconcotk: Update to 1.12.1.
* gnu/packages/bioconductor.scm (r-bioconcotk): Update to 1.12.1.
2021-07-10 21:35:29 +02:00
Ricardo Wurmus
1cbcf54204
gnu: r-biocstyle: Update to 2.20.2.
* gnu/packages/bioconductor.scm (r-biocstyle): Update to 2.20.2.
2021-07-10 21:35:29 +02:00
Ricardo Wurmus
23abd7b6b6
gnu: r-mixomics: Update to 6.16.1.
* gnu/packages/bioconductor.scm (r-mixomics): Update to 6.16.1.
2021-07-10 21:35:29 +02:00
Ricardo Wurmus
3d539883ca
gnu: r-rsubread: Update to 2.6.3.
* gnu/packages/bioconductor.scm (r-rsubread): Update to 2.6.3.
2021-07-10 21:35:29 +02:00
Ricardo Wurmus
a94d1e3b4c
gnu: r-annaffy: Update to 1.64.2.
* gnu/packages/bioconductor.scm (r-annaffy): Update to 1.64.2.
2021-07-10 21:35:29 +02:00
Ricardo Wurmus
344c901a4c
gnu: r-clusterprofiler: Update to 4.0.2.
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 4.0.2.
2021-07-10 21:35:29 +02:00
Ricardo Wurmus
a5e6826020
gnu: r-enrichplot: Update to 1.12.2.
* gnu/packages/bioconductor.scm (r-enrichplot): Update to 1.12.2.
2021-07-10 21:35:29 +02:00
Ricardo Wurmus
209642912d
gnu: r-dose: Update to 3.18.1.
* gnu/packages/bioconductor.scm (r-dose): Update to 3.18.1.
2021-07-10 21:35:29 +02:00
Ricardo Wurmus
072533f579
gnu: r-diffbind: Update to 3.2.4.
* gnu/packages/bioconductor.scm (r-diffbind): Update to 3.2.4.
2021-07-10 21:35:28 +02:00
Ricardo Wurmus
9496f34e23
gnu: r-systempiper: Update to 1.26.3.
* gnu/packages/bioconductor.scm (r-systempiper): Update to 1.26.3.
[propagated-inputs]: Add r-crayon and r-s4vectors.
2021-07-10 21:35:28 +02:00
Ricardo Wurmus
ea52ad7d4f
gnu: r-mzr: Update to 2.26.1.
* gnu/packages/bioconductor.scm (r-mzr): Update to 2.26.1.
2021-07-10 21:35:28 +02:00
Ricardo Wurmus
8936e45327
gnu: r-limma: Update to 3.48.1.
* gnu/packages/bioconductor.scm (r-limma): Update to 3.48.1.
2021-07-10 21:35:28 +02:00
Ricardo Wurmus
dfe8e5cca6
gnu: r-genomeinfodb: Update to 1.28.1.
* gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.28.1.
2021-07-10 21:35:28 +02:00
Ricardo Wurmus
fd00ed8ff8
gnu: r-ensembldb: Update to 2.16.2.
* gnu/packages/bioconductor.scm (r-ensembldb): Update to 2.16.2.
2021-07-10 21:35:28 +02:00
Ricardo Wurmus
3c60e8d5e5
gnu: r-edaseq: Update to 2.26.1.
* gnu/packages/bioconductor.scm (r-edaseq): Update to 2.26.1.
2021-07-10 21:35:28 +02:00
Ricardo Wurmus
f8d7d07679
gnu: r-biocparallel: Update to 1.26.1.
* gnu/packages/bioconductor.scm (r-biocparallel): Update to 1.26.1.
2021-07-10 21:35:28 +02:00
Ricardo Wurmus
03c9d86432
gnu: r-biomart: Update to 2.48.2.
* gnu/packages/bioconductor.scm (r-biomart): Update to 2.48.2.
2021-07-10 21:35:28 +02:00
Ricardo Wurmus
74bfaf92db
gnu: r-annotationhub: Update to 3.0.1.
* gnu/packages/bioconductor.scm (r-annotationhub): Update to 3.0.1.
2021-07-10 21:35:28 +02:00
Ricardo Wurmus
4aa90cb4b3
gnu: Add r-cistopic-next.
* gnu/packages/bioconductor.scm (r-cistopic-next): New variable.
2021-06-29 12:28:44 +02:00
Ricardo Wurmus
4fb2b5cef8
gnu: r-cistopic: Update to 2.1.0.
* gnu/packages/bioconductor.scm (r-cistopic): Update to 2.1.0.
2021-06-28 19:23:49 +02:00
Ricardo Wurmus
c44271445a
gnu: r-monocle3: Update to 1.0.0.
* gnu/packages/bioconductor.scm (r-monocle3): Update to 1.0.0.
[propagated-inputs]: Add r-batchelor, r-leidenbase, and r-rsample.
2021-06-21 17:53:26 +02:00
Ricardo Wurmus
7209beb694
gnu: Add r-leidenbase.
* gnu/packages/bioconductor.scm (r-leidenbase): New variable.
2021-06-21 17:53:26 +02:00
Ricardo Wurmus
a41bddd29d
gnu: Add r-batchelor.
* gnu/packages/bioconductor.scm (r-batchelor): New variable.
2021-06-21 17:53:26 +02:00
Ricardo Wurmus
278e1c090e
gnu: Add r-residualmatrix.
* gnu/packages/bioconductor.scm (r-residualmatrix): New variable.
2021-06-21 17:53:26 +02:00
Ricardo Wurmus
111aa862ec
gnu: r-monocle3: Add missing input.
* gnu/packages/bioconductor.scm (r-monocle3)[propagated-inputs]: Add
r-assertthat.
2021-06-21 17:53:25 +02:00
Ricardo Wurmus
ef5468ff0e
gnu: Add r-chicago.
* gnu/packages/bioconductor.scm (r-chicago): New variable.
2021-06-17 14:57:47 +02:00
Ricardo Wurmus
88d8b4ece0
gnu: r-gviz: Update to 1.36.1.
* gnu/packages/bioconductor.scm (r-gviz): Update to 1.36.1.
2021-06-17 14:25:36 +02:00
Ricardo Wurmus
45f1e079a5
gnu: r-scater: Update to 1.20.1.
* gnu/packages/bioconductor.scm (r-scater): Update to 1.20.1.
2021-06-17 14:25:36 +02:00
Ricardo Wurmus
06fb533c28
gnu: r-rhdf5lib: Update to 1.14.1.
* gnu/packages/bioconductor.scm (r-rhdf5lib): Update to 1.14.1.
2021-06-17 14:25:36 +02:00
Ricardo Wurmus
e4c2155263
gnu: r-biocstyle: Update to 2.20.1.
* gnu/packages/bioconductor.scm (r-biocstyle): Update to 2.20.1.
2021-06-17 14:25:36 +02:00
Ricardo Wurmus
46178051d5
gnu: r-enrichplot: Update to 1.12.1.
* gnu/packages/bioconductor.scm (r-enrichplot): Update to 1.12.1.
2021-06-17 14:25:36 +02:00
Ricardo Wurmus
c5b7ade1c6
gnu: r-biocsingular: Update to 1.8.1.
* gnu/packages/bioconductor.scm (r-biocsingular): Update to 1.8.1.
2021-06-17 14:25:36 +02:00
Ricardo Wurmus
79b67d2f54
gnu: r-diffbind: Update to 3.2.2.
* gnu/packages/bioconductor.scm (r-diffbind): Update to 3.2.2.
2021-06-17 14:25:36 +02:00
Ricardo Wurmus
005d3d4058
gnu: r-biostrings: Update to 2.60.1.
* gnu/packages/bioconductor.scm (r-biostrings): Update to 2.60.1.
2021-06-17 14:25:36 +02:00
Ricardo Wurmus
495a9cff6d
gnu: r-biomart: Update to 2.48.1.
* gnu/packages/bioconductor.scm (r-biomart): Update to 2.48.1.
[propagated-inputs]: Add r-xml2.
2021-06-17 14:25:36 +02:00
Ricardo Wurmus
49e8978452
gnu: r-annotationdbi: Update to 1.54.1.
* gnu/packages/bioconductor.scm (r-annotationdbi): Update to 1.54.1.
2021-06-17 14:25:36 +02:00
Ricardo Wurmus
8f12002f6e
gnu: r-sushi: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-sushi): Update to 1.30.0.
2021-06-05 09:12:58 +02:00
Ricardo Wurmus
abe7628a05
gnu: r-guitar: Update to 2.8.0.
* gnu/packages/bioconductor.scm (r-guitar): Update to 2.8.0.
2021-06-05 09:12:58 +02:00
Ricardo Wurmus
3a5642d72e
gnu: r-chromstar: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-chromstar): Update to 1.18.0.
2021-06-05 09:12:58 +02:00
Ricardo Wurmus
3e2052e7da
gnu: r-snpstats: Update to 1.42.0.
* gnu/packages/bioconductor.scm (r-snpstats): Update to 1.42.0.
2021-06-05 09:12:58 +02:00
Ricardo Wurmus
8fa5a4d753
gnu: r-pathview: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-pathview): Update to 1.32.0.
2021-06-05 09:12:58 +02:00
Ricardo Wurmus
b4cea45e7c
gnu: r-ldblock: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-ldblock): Update to 1.22.0.
2021-06-05 09:12:58 +02:00
Ricardo Wurmus
2860208c42
gnu: r-kegggraph: Update to 1.52.0.
* gnu/packages/bioconductor.scm (r-kegggraph): Update to 1.52.0.
[propagated-inputs]: Add r-rgraphviz.
2021-06-05 09:12:58 +02:00
Ricardo Wurmus
a06d13be09
gnu: r-gwascat: Update to 2.24.0.
* gnu/packages/bioconductor.scm (r-gwascat): Update to 2.24.0.
[propagated-inputs]: Add r-annotationhub.
2021-06-05 09:12:58 +02:00
Ricardo Wurmus
bdfa1178b9
gnu: r-gviz: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-gviz): Update to 1.36.0.
2021-06-05 09:12:57 +02:00
Ricardo Wurmus
46b7d19dcc
gnu: r-ggbio: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-ggbio): Update to 1.40.0.
2021-06-05 09:12:57 +02:00
Ricardo Wurmus
bd6d0007d9
gnu: r-erma: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-erma): Update to 1.8.0.
2021-06-05 09:12:57 +02:00
Ricardo Wurmus
8ad54dc134
gnu: r-catalyst: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-catalyst): Update to 1.16.0.
2021-06-05 09:12:57 +02:00
Ricardo Wurmus
2fe8673263
gnu: r-msmstests: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-msmstests): Update to 1.30.0.
2021-06-05 09:12:57 +02:00
Ricardo Wurmus
e501608db3
gnu: r-msmseda: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-msmseda): Update to 1.30.0.
2021-06-05 09:12:57 +02:00
Ricardo Wurmus
b5a387745a
gnu: r-biocio: Update to 1.2.0.
* gnu/packages/bioconductor.scm (r-biocio): Update to 1.2.0.
[propagated-inputs]: Remove r-genomicranges and r-rcurl.
2021-06-05 09:12:57 +02:00
Ricardo Wurmus
aaf095825b
gnu: r-mscoreutils: Update to 1.4.0.
* gnu/packages/bioconductor.scm (r-mscoreutils): Update to 1.4.0.
[propagated-inputs]: Add r-clue.
2021-06-05 09:12:57 +02:00
Ricardo Wurmus
47e291df84
gnu: r-delayedmatrixstats: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-delayedmatrixstats): Update to 1.14.0.
[propagated-inputs]: Remove r-biocparallel and r-hdf5array.
2021-06-05 09:12:57 +02:00
Ricardo Wurmus
360477c202
gnu: r-sparsematrixstats: Update to 1.4.0.
* gnu/packages/bioconductor.scm (r-sparsematrixstats): Update to 1.4.0.
2021-06-05 09:12:57 +02:00
Ricardo Wurmus
015ba64bc0
gnu: r-scran: Update to 1.20.1.
* gnu/packages/bioconductor.scm (r-scran): Update to 1.20.1.
[propagated-inputs]: Remove r-biocneighbors; add r-metapod.
2021-06-05 09:12:57 +02:00
Ricardo Wurmus
d9755a22f6
gnu: r-scater: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-scater): Update to 1.20.0.
[propagated-inputs]: Add r-beachmat, r-rcolorbrewer, and r-rtsne.
2021-06-05 09:12:57 +02:00
Ricardo Wurmus
851894f8da
gnu: r-scuttle: Update to 1.2.0.
* gnu/packages/bioconductor.scm (r-scuttle): Update to 1.2.0.
2021-06-05 09:12:57 +02:00
Ricardo Wurmus
b21a73c00b
gnu: r-singlecellexperiment: Update to 1.14.1.
* gnu/packages/bioconductor.scm (r-singlecellexperiment): Update to 1.14.1.
[propagated-inputs]: Add r-delayedarray and r-genomicranges.
2021-06-05 09:12:57 +02:00
Ricardo Wurmus
71e392966a
gnu: r-chromvar: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-chromvar): Update to 1.14.0.
2021-06-05 09:12:56 +02:00
Ricardo Wurmus
56a2dcfdc7
gnu: r-motifmatchr: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-motifmatchr): Update to 1.14.0.
2021-06-05 09:12:56 +02:00
Ricardo Wurmus
0b6b42b6c4
gnu: r-tfbstools: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-tfbstools): Update to 1.30.0.
2021-06-05 09:12:56 +02:00
Ricardo Wurmus
a92a277873
gnu: r-cner: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-cner): Update to 1.28.0.
2021-06-05 09:12:56 +02:00
Ricardo Wurmus
370d020e88
gnu: r-beachmat: Update to 2.8.0.
* gnu/packages/bioconductor.scm (r-beachmat): Update to 2.8.0.
[propagated-inputs]: Add r-rcpp.
2021-06-05 09:12:56 +02:00
Ricardo Wurmus
dbb929bf4a
gnu: r-hitc: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-hitc): Update to 1.36.0.
2021-06-05 09:12:56 +02:00
Ricardo Wurmus
914bd41da9
gnu: r-fithic: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-fithic): Update to 1.18.0.
2021-06-05 09:12:56 +02:00
Ricardo Wurmus
64b03c66ad
gnu: r-rgraphviz: Update to 2.36.0.
* gnu/packages/bioconductor.scm (r-rgraphviz): Update to 2.36.0.
2021-06-05 09:12:56 +02:00
Ricardo Wurmus
5565b8bada
gnu: r-s4vectors: Update to 0.30.0.
* gnu/packages/bioconductor.scm (r-s4vectors): Update to 0.30.0.
2021-06-05 09:12:56 +02:00
Ricardo Wurmus
a78daaa572
gnu: r-preprocesscore: Update to 1.54.0.
* gnu/packages/bioconductor.scm (r-preprocesscore): Update to 1.54.0.
2021-06-05 09:12:56 +02:00
Ricardo Wurmus
a9f203ba6c
gnu: r-icens: Update to 1.64.0.
* gnu/packages/bioconductor.scm (r-icens): Update to 1.64.0.
2021-06-05 09:12:56 +02:00
Ricardo Wurmus
3b19239c0f
gnu: r-m3c: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-m3c): Update to 1.14.0.
2021-06-05 09:12:56 +02:00
Ricardo Wurmus
06dd2fd625
gnu: r-rgreat: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-rgreat): Update to 1.24.0.
2021-06-05 09:12:56 +02:00
Ricardo Wurmus
5d611d3f15
gnu: r-pcatools: Update to 2.4.0.
* gnu/packages/bioconductor.scm (r-pcatools): Update to 2.4.0.
2021-06-05 09:12:55 +02:00
Ricardo Wurmus
db46064043
gnu: r-biodist: Update to 1.64.0.
* gnu/packages/bioconductor.scm (r-biodist): Update to 1.64.0.
2021-06-05 09:12:55 +02:00
Ricardo Wurmus
36f51f8afe
gnu: r-biocworkflowtools: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-biocworkflowtools): Update to 1.18.0.
2021-06-05 09:12:55 +02:00
Ricardo Wurmus
e828fa21bb
gnu: r-biocset: Update to 1.6.0.
* gnu/packages/bioconductor.scm (r-biocset): Update to 1.6.0.
2021-06-05 09:12:55 +02:00
Ricardo Wurmus
e9e4f65dc1
gnu: r-biocpkgtools: Update to 1.10.1.
* gnu/packages/bioconductor.scm (r-biocpkgtools): Update to 1.10.1.
[propagated-inputs]: Remove r-rappdirs.
2021-06-05 09:12:55 +02:00
Ricardo Wurmus
2023951c8e
gnu: r-biocor: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-biocor): Update to 1.16.0.
2021-06-05 09:12:55 +02:00
Ricardo Wurmus
4faded238e
gnu: r-bioconcotk: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-bioconcotk): Update to 1.12.0.
2021-06-05 09:12:55 +02:00
Ricardo Wurmus
e7b465e81b
gnu: r-multiassayexperiment: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-multiassayexperiment): Update to 1.18.0.
2021-06-05 09:12:55 +02:00
Ricardo Wurmus
37f824c5e7
gnu: r-grohmm: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-grohmm): Update to 1.26.0.
2021-06-05 09:12:55 +02:00
Ricardo Wurmus
28613e1000
gnu: r-experimenthub: Update to 2.0.0.
* gnu/packages/bioconductor.scm (r-experimenthub): Update to 2.0.0.
2021-06-05 09:12:55 +02:00
Ricardo Wurmus
1e2c0e824c
gnu: r-biocviews: Update to 1.60.0.
* gnu/packages/bioconductor.scm (r-biocviews): Update to 1.60.0.
2021-06-05 09:12:55 +02:00
Ricardo Wurmus
6513592747
gnu: r-biocstyle: Update to 2.20.0.
* gnu/packages/bioconductor.scm (r-biocstyle): Update to 2.20.0.
2021-06-05 09:12:55 +02:00
Ricardo Wurmus
cd9af2379d
gnu: r-biocgraph: Update to 1.54.0.
* gnu/packages/bioconductor.scm (r-biocgraph): Update to 1.54.0.
2021-06-05 09:12:55 +02:00
Ricardo Wurmus
834a6dbaab
gnu: r-ebarrays: Update to 2.56.0.
* gnu/packages/bioconductor.scm (r-ebarrays): Update to 2.56.0.
2021-06-05 09:12:55 +02:00
Ricardo Wurmus
f218b9b216
gnu: r-reactomepa: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-reactomepa): Update to 1.36.0.
2021-06-05 09:12:55 +02:00
Ricardo Wurmus
a95a14c0cc
gnu: r-graphite: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-graphite): Update to 1.38.0.
[native-inputs]: Add r-knitr.
2021-06-05 09:12:55 +02:00
Ricardo Wurmus
dc2878754c
gnu: r-biobroom: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-biobroom): Update to 1.24.0.
2021-06-05 09:12:55 +02:00
Ricardo Wurmus
7c990fbcb3
gnu: r-bioassayr: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-bioassayr): Update to 1.30.0.
2021-06-05 09:12:54 +02:00
Ricardo Wurmus
02ec364cf6
gnu: r-chemminer: Update to 3.44.0.
* gnu/packages/bioconductor.scm (r-chemminer): Update to 3.44.0.
2021-06-05 09:12:54 +02:00
Ricardo Wurmus
8a8f200703
gnu: r-bigpint: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-bigpint): Update to 1.8.0.
2021-06-05 09:12:54 +02:00
Ricardo Wurmus
90eb7ae1a9
gnu: r-biggr: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-biggr): Update to 1.28.0.
2021-06-05 09:12:54 +02:00
Ricardo Wurmus
302929da31
gnu: r-hyperdraw: Update to 1.44.0.
* gnu/packages/bioconductor.scm (r-hyperdraw): Update to 1.44.0.
2021-06-05 09:12:54 +02:00
Ricardo Wurmus
d51885812f
gnu: r-hypergraph: Update to 1.64.0.
* gnu/packages/bioconductor.scm (r-hypergraph): Update to 1.64.0.
2021-06-05 09:12:54 +02:00
Ricardo Wurmus
92f5efa65d
gnu: r-rsbml: Update to 2.50.0.
* gnu/packages/bioconductor.scm (r-rsbml): Update to 2.50.0.
[inputs]: Remove zlib.
2021-06-05 09:12:54 +02:00
Ricardo Wurmus
58b8ed9f08
gnu: r-bifet: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-bifet): Update to 1.12.0.
2021-06-05 09:12:54 +02:00
Ricardo Wurmus
49403e8241
gnu: r-bicare: Update to 1.50.0.
* gnu/packages/bioconductor.scm (r-bicare): Update to 1.50.0.
2021-06-05 09:12:54 +02:00
Ricardo Wurmus
3c64554bbc
gnu: r-bhc: Update to 1.44.0.
* gnu/packages/bioconductor.scm (r-bhc): Update to 1.44.0.
2021-06-05 09:12:54 +02:00
Ricardo Wurmus
bacd432cb1
gnu: r-bgx: Update to 1.58.0.
* gnu/packages/bioconductor.scm (r-bgx): Update to 1.58.0.
2021-06-05 09:12:54 +02:00
Ricardo Wurmus
51d637a32d
gnu: r-bgmix: Update to 1.52.0.
* gnu/packages/bioconductor.scm (r-bgmix): Update to 1.52.0.
2021-06-05 09:12:54 +02:00
Ricardo Wurmus
e4087ae9c9
gnu: r-universalmotif: Update to 1.10.1.
* gnu/packages/bioconductor.scm (r-universalmotif): Update to 1.10.1.
[propagated-inputs]: Remove r-ggseqlogo and r-rdpack.
2021-06-05 09:12:54 +02:00
Ricardo Wurmus
56ec3a6fb9
gnu: r-unifiedwmwqpcr: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-unifiedwmwqpcr): Update to 1.28.0.
2021-06-05 09:12:54 +02:00
Ricardo Wurmus
58f2abfbce
gnu: r-htqpcr: Update to 1.46.0.
* gnu/packages/bioconductor.scm (r-htqpcr): Update to 1.46.0.
2021-06-05 09:12:54 +02:00
Ricardo Wurmus
2ca9f4fe9b
gnu: r-variancepartition: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-variancepartition): Update to 1.22.0.
2021-06-05 09:12:54 +02:00
Ricardo Wurmus
27e06000b1
gnu: r-variantfiltering: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-variantfiltering): Update to 1.28.0.
2021-06-05 09:12:54 +02:00
Ricardo Wurmus
7a287bc670
gnu: r-timeseriesexperiment: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-timeseriesexperiment): Update to 1.10.0.
2021-06-05 09:12:53 +02:00
Ricardo Wurmus
99496a17f5
gnu: r-wavcluster: Update to 2.26.0.
* gnu/packages/bioconductor.scm (r-wavcluster): Update to 2.26.0.
2021-06-05 09:12:53 +02:00
Ricardo Wurmus
66e45a9f1f
gnu: r-reqon: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-reqon): Update to 1.38.0.
2021-06-05 09:12:53 +02:00
Ricardo Wurmus
0615d394c9
gnu: r-seqbias: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-seqbias): Update to 1.40.0.
2021-06-05 09:12:53 +02:00
Ricardo Wurmus
988337d87b
gnu: r-bigmelon: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-bigmelon): Update to 1.18.0.
2021-06-05 09:12:53 +02:00
Ricardo Wurmus
0cc4deb017
gnu: r-gdsfmt: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-gdsfmt): Update to 1.28.0.
2021-06-05 09:12:53 +02:00
Ricardo Wurmus
d0c36449d2
gnu: r-watermelon: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-watermelon): Update to 1.36.0.
2021-06-05 09:12:53 +02:00
Ricardo Wurmus
125ffdf788
gnu: r-roc: Update to 1.68.0.
* gnu/packages/bioconductor.scm (r-roc): Update to 1.68.0.
2021-06-05 09:12:53 +02:00
Ricardo Wurmus
bb3ef4894b
gnu: r-genie3: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-genie3): Update to 1.14.0.
[propagated-inputs]: Add r-dplyr.
2021-06-05 09:12:53 +02:00
Ricardo Wurmus
d37ae38d19
gnu: r-circrnaprofiler: Update to 1.6.0.
* gnu/packages/bioconductor.scm (r-circrnaprofiler): Update to 1.6.0.
2021-06-05 09:12:53 +02:00
Ricardo Wurmus
cec7972759
gnu: r-cicero: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-cicero): Update to 1.10.0.
2021-06-05 09:12:53 +02:00
Ricardo Wurmus
f9049add35
gnu: r-rcistarget: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-rcistarget): Update to 1.12.0.
[propagated-inputs]: Add r-arrow, r-dplyr, r-genomeinfodb, r-genomicranges, and r-tibble.
2021-06-05 09:12:53 +02:00
Ricardo Wurmus
9c0b691a29
gnu: r-depecher: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-depecher): Update to 1.8.0.
2021-06-05 09:12:53 +02:00
Ricardo Wurmus
480dcf3038
gnu: r-mixomics: Update to 6.16.0.
* gnu/packages/bioconductor.scm (r-mixomics): Update to 6.16.0.
2021-06-05 09:12:53 +02:00
Ricardo Wurmus
9ed2ec5bff
gnu: r-flowsom: Update to 2.0.0.
* gnu/packages/bioconductor.scm (r-flowsom): Update to 2.0.0.
[propagated-inputs]: Remove r-tsne; add r-colorramps, r-dplyr, r-ggforce, r-ggnewscale,
r-ggplot2, r-ggpointdensity, r-ggpubr, r-ggrepel, r-magrittr,
r-pheatmap, r-rlang, r-rtsne, r-scattermore, and r-tidyr.
2021-06-05 09:12:53 +02:00
Ricardo Wurmus
53c041713a
gnu: r-opencyto: Update to 2.4.0.
* gnu/packages/bioconductor.scm (r-opencyto): Update to 2.4.0.
2021-06-05 09:12:53 +02:00
Ricardo Wurmus
6489371b80
gnu: r-flowstats: Update to 4.4.0.
* gnu/packages/bioconductor.scm (r-flowstats): Update to 4.4.0.
2021-06-05 09:12:53 +02:00
Ricardo Wurmus
a1557adfcf
gnu: r-rprotobuflib: Update to 2.4.0.
* gnu/packages/bioconductor.scm (r-rprotobuflib): Update to 2.4.0.
[arguments]: Adjust build phase "unpack-bundled-sources".
2021-06-05 09:12:52 +02:00
Ricardo Wurmus
c474b4784e
gnu: r-flowclust: Update to 3.30.0.
* gnu/packages/bioconductor.scm (r-flowclust): Update to 3.30.0.
2021-06-05 09:12:52 +02:00
Ricardo Wurmus
57a41cd789
gnu: r-flowviz: Update to 1.56.0.
* gnu/packages/bioconductor.scm (r-flowviz): Update to 1.56.0.
2021-06-05 09:12:52 +02:00
Ricardo Wurmus
417b4108bc
gnu: r-ggcyto: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-ggcyto): Update to 1.20.0.
2021-06-05 09:12:52 +02:00
Ricardo Wurmus
5e49dfd00e
gnu: r-flowmeans: Update to 1.52.0.
* gnu/packages/bioconductor.scm (r-flowmeans): Update to 1.52.0.
2021-06-05 09:12:52 +02:00
Ricardo Wurmus
19855b595c
gnu: r-flowcore: Update to 2.4.0.
* gnu/packages/bioconductor.scm (r-flowcore): Update to 2.4.0.
2021-06-05 09:12:52 +02:00
Ricardo Wurmus
4299d97756
gnu: r-consensusclusterplus: Update to 1.56.0.
* gnu/packages/bioconductor.scm (r-consensusclusterplus): Update to 1.56.0.
2021-06-05 09:12:52 +02:00
Ricardo Wurmus
6a7589de24
gnu: r-flowutils: Update to 1.56.0.
* gnu/packages/bioconductor.scm (r-flowutils): Update to 1.56.0.
2021-06-05 09:12:52 +02:00
Ricardo Wurmus
db56495f39
gnu: r-rsubread: Update to 2.6.1.
* gnu/packages/bioconductor.scm (r-rsubread): Update to 2.6.1.
2021-06-05 09:12:52 +02:00
Ricardo Wurmus
758c1cd3c2
gnu: r-annotatr: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-annotatr): Update to 1.18.0.
2021-06-05 09:12:52 +02:00
Ricardo Wurmus
28472b62d3
gnu: r-biosigner: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-biosigner): Update to 1.20.0.
2021-06-05 09:12:52 +02:00
Ricardo Wurmus
3501292721
gnu: r-ropls: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-ropls): Update to 1.24.0.
2021-06-05 09:12:52 +02:00
Ricardo Wurmus
3d9b6386fa
gnu: r-multidataset: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-multidataset): Update to 1.20.0.
2021-06-05 09:12:52 +02:00
Ricardo Wurmus
f9c306eb01
gnu: r-birewire: Update to 3.24.0.
* gnu/packages/bioconductor.scm (r-birewire): Update to 3.24.0.
2021-06-05 09:12:52 +02:00
Ricardo Wurmus
ec78a01db3
gnu: r-rqc: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-rqc): Update to 1.26.0.
2021-06-05 09:12:52 +02:00
Ricardo Wurmus
f039c22c97
gnu: r-quasr: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-quasr): Update to 1.32.0.
[propagated-inputs]: Remove r-genomicalignments and r-rhisat2.
2021-06-05 09:12:52 +02:00
Ricardo Wurmus
274b1e2e16
gnu: r-rhisat2: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-rhisat2): Update to 1.8.0.
2021-06-05 09:12:52 +02:00
Ricardo Wurmus
eca0820c77
gnu: r-sgseq: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-sgseq): Update to 1.26.0.
2021-06-05 09:12:51 +02:00
Ricardo Wurmus
0e74fff5eb
gnu: r-rbowtie: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-rbowtie): Update to 1.32.0.
2021-06-05 09:12:51 +02:00
Ricardo Wurmus
69295659be
gnu: r-iclusterplus: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-iclusterplus): Update to 1.28.0.
2021-06-05 09:12:51 +02:00
Ricardo Wurmus
46fc0334ff
gnu: r-biocfilecache: Update to 2.0.0.
* gnu/packages/bioconductor.scm (r-biocfilecache): Update to 2.0.0.
[propagated-inputs]: Add r-filelock.
2021-06-05 09:12:51 +02:00
Ricardo Wurmus
1dce605505
gnu: r-arrmnormalization: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-arrmnormalization): Update to 1.32.0.
2021-06-05 09:12:51 +02:00
Ricardo Wurmus
7cf4911aa2
gnu: r-progeny: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-progeny): Update to 1.14.0.
2021-06-05 09:12:51 +02:00
Ricardo Wurmus
25ba2d38a1
gnu: r-rbowtie2: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-rbowtie2): Update to 1.14.0.
2021-06-05 09:12:51 +02:00
Ricardo Wurmus
6145252f1a
gnu: r-zfpkm: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-zfpkm): Update to 1.14.0.
2021-06-05 09:12:51 +02:00
Ricardo Wurmus
fc400d10c0
gnu: r-zinbwave: Update to 1.14.1.
* gnu/packages/bioconductor.scm (r-zinbwave): Update to 1.14.1.
2021-06-05 09:12:51 +02:00
Ricardo Wurmus
34137c2145
gnu: r-webbioc: Update to 1.64.0.
* gnu/packages/bioconductor.scm (r-webbioc): Update to 1.64.0.
2021-06-05 09:12:51 +02:00
Ricardo Wurmus
3a7ad7fb8a
gnu: r-widgettools: Update to 1.70.0.
* gnu/packages/bioconductor.scm (r-widgettools): Update to 1.70.0.
2021-06-05 09:12:51 +02:00
Ricardo Wurmus
e91b4088f2
gnu: r-wiggleplotr: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-wiggleplotr): Update to 1.16.0.
2021-06-05 09:12:51 +02:00
Ricardo Wurmus
2da5ef4c55
gnu: r-wrench: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-wrench): Update to 1.10.0.
2021-06-05 09:12:51 +02:00
Ricardo Wurmus
d463b4006d
gnu: r-xcms: Update to 3.14.0.
* gnu/packages/bioconductor.scm (r-xcms): Update to 3.14.0.
2021-06-05 09:12:51 +02:00
Ricardo Wurmus
ef30a43ec7
gnu: r-massspecwavelet: Update to 1.58.0.
* gnu/packages/bioconductor.scm (r-massspecwavelet): Update to 1.58.0.
2021-06-05 09:12:51 +02:00
Ricardo Wurmus
48737e92e4
gnu: r-roar: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-roar): Update to 1.28.0.
2021-06-05 09:12:51 +02:00
Ricardo Wurmus
4a9e3d2fbe
gnu: r-yarn: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-yarn): Update to 1.18.0.
2021-06-05 09:12:51 +02:00
Ricardo Wurmus
8d6a721a94
gnu: r-quantro: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-quantro): Update to 1.26.0.
2021-06-05 09:12:51 +02:00
Ricardo Wurmus
a72006c9b0
gnu: r-gcrma: Update to 2.64.0.
* gnu/packages/bioconductor.scm (r-gcrma): Update to 2.64.0.
2021-06-05 09:12:50 +02:00
Ricardo Wurmus
995c43885e
gnu: r-yapsa: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-yapsa): Update to 1.18.0.
2021-06-05 09:12:50 +02:00
Ricardo Wurmus
774e916736
gnu: r-somaticsignatures: Update to 2.28.0.
* gnu/packages/bioconductor.scm (r-somaticsignatures): Update to 2.28.0.
2021-06-05 09:12:50 +02:00
Ricardo Wurmus
79469116bd
gnu: r-gtrellis: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-gtrellis): Update to 1.24.0.
2021-06-05 09:12:50 +02:00
Ricardo Wurmus
9866a9b984
gnu: r-yamss: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-yamss): Update to 1.18.0.
2021-06-05 09:12:50 +02:00
Ricardo Wurmus
3e1c585523
gnu: r-ebimage: Update to 4.34.0.
* gnu/packages/bioconductor.scm (r-ebimage): Update to 4.34.0.
2021-06-05 09:12:50 +02:00
Ricardo Wurmus
7238b33185
gnu: r-aucell: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-aucell): Update to 1.14.0.
2021-06-05 09:12:50 +02:00
Ricardo Wurmus
51e7e0145b
gnu: r-allelicimbalance: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-allelicimbalance): Update to 1.30.0.
2021-06-05 09:12:50 +02:00
Ricardo Wurmus
0cef014f7c
gnu: r-annotationtools: Update to 1.66.0.
* gnu/packages/bioconductor.scm (r-annotationtools): Update to 1.66.0.
2021-06-05 09:12:50 +02:00
Ricardo Wurmus
77a1c4a6aa
gnu: r-abaenrichment: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-abaenrichment): Update to 1.22.0.
2021-06-05 09:12:50 +02:00
Ricardo Wurmus
b7f6999ee4
gnu: r-gofuncr: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-gofuncr): Update to 1.12.0.
2021-06-05 09:12:50 +02:00
Ricardo Wurmus
2357a732e5
gnu: r-atacseqqc: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-atacseqqc): Update to 1.16.0.
2021-06-05 09:12:50 +02:00
Ricardo Wurmus
4627fefcdc
gnu: r-genomicscores: Update to 2.4.0.
* gnu/packages/bioconductor.scm (r-genomicscores): Update to 2.4.0.
2021-06-05 09:12:50 +02:00
Ricardo Wurmus
6e762d2f5a
gnu: r-motifstack: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-motifstack): Update to 1.36.0.
2021-06-05 09:12:50 +02:00
Ricardo Wurmus
1390f426db
gnu: r-motifbreakr: Update to 2.6.0.
* gnu/packages/bioconductor.scm (r-motifbreakr): Update to 2.6.0.
2021-06-05 09:12:50 +02:00
Ricardo Wurmus
b532b80afb
gnu: r-motifdb: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-motifdb): Update to 1.34.0.
2021-06-05 09:12:49 +02:00
Ricardo Wurmus
f16dcdc1bf
gnu: r-rgadem: Update to 2.40.0.
* gnu/packages/bioconductor.scm (r-rgadem): Update to 2.40.0.
2021-06-05 09:12:49 +02:00
Ricardo Wurmus
2ace8e39c9
gnu: r-bacon: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-bacon): Update to 1.20.0.
2021-06-05 09:12:49 +02:00
Ricardo Wurmus
33bf7b57b1
gnu: r-abseqr: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-abseqr): Update to 1.10.0.
2021-06-05 09:12:49 +02:00
Ricardo Wurmus
822024e6f9
gnu: r-a4: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-a4): Update to 1.40.0.
2021-06-05 09:12:49 +02:00
Ricardo Wurmus
76fb2de29b
gnu: r-a4base: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-a4base): Update to 1.40.0.
2021-06-05 09:12:49 +02:00
Ricardo Wurmus
1217dab2e2
gnu: r-a4reporting: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-a4reporting): Update to 1.40.0.
2021-06-05 09:12:49 +02:00
Ricardo Wurmus
751b4904b0
gnu: r-a4preproc: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-a4preproc): Update to 1.40.0.
2021-06-05 09:12:49 +02:00
Ricardo Wurmus
319d9dcfb2
gnu: r-a4classif: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-a4classif): Update to 1.40.0.
2021-06-05 09:12:49 +02:00
Ricardo Wurmus
2aad8aa075
gnu: r-a4core: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-a4core): Update to 1.40.0.
2021-06-05 09:12:49 +02:00
Ricardo Wurmus
387c023105
gnu: r-annaffy: Update to 1.63.1.
* gnu/packages/bioconductor.scm (r-annaffy): Update to 1.63.1.
[propagated-inputs]: Add r-biocmanager.
2021-06-05 09:12:49 +02:00
Ricardo Wurmus
ad3b03d6ad
gnu: r-mlinterfaces: Update to 1.72.0.
* gnu/packages/bioconductor.scm (r-mlinterfaces): Update to 1.72.0.
[propagated-inputs]: Add r-magrittr.
2021-06-05 09:12:49 +02:00
Ricardo Wurmus
2a7532cca8
gnu: r-clusterexperiment: Update to 2.12.0.
* gnu/packages/bioconductor.scm (r-clusterexperiment): Update to 2.12.0.
[propagated-inputs]: Remove r-rspectra; add r-biocsingular.
2021-06-05 09:12:49 +02:00
Ricardo Wurmus
2b4c784b2b
gnu: r-clusterprofiler: Update to 4.0.0.
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 4.0.0.
2021-06-05 09:12:49 +02:00
Ricardo Wurmus
8b0dc8e39c
gnu: r-enrichplot: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-enrichplot): Update to 1.12.0.
[propagated-inputs]: Add r-ggtree.
2021-06-05 09:12:49 +02:00
Ricardo Wurmus
ca136dd70a
gnu: r-dose: Update to 3.18.0.
* gnu/packages/bioconductor.scm (r-dose): Update to 3.18.0.
2021-06-05 09:12:49 +02:00
Ricardo Wurmus
c8bec0d962
gnu: r-fgsea: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-fgsea): Update to 1.18.0.
2021-06-05 09:12:49 +02:00
Ricardo Wurmus
1bfe5c274f
gnu: r-sigpathway: Update to 1.60.0.
* gnu/packages/bioconductor.scm (r-sigpathway): Update to 1.60.0.
2021-06-05 09:12:48 +02:00
Ricardo Wurmus
dda291540b
gnu: r-anota: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-anota): Update to 1.40.0.
2021-06-05 09:12:48 +02:00
Ricardo Wurmus
376d9dd825
gnu: r-gosemsim: Update to 2.18.0.
* gnu/packages/bioconductor.scm (r-gosemsim): Update to 2.18.0.
2021-06-05 09:12:48 +02:00
Ricardo Wurmus
faf60162a3
gnu: r-heatplus: Update to 3.0.0.
* gnu/packages/bioconductor.scm (r-heatplus): Update to 3.0.0.
2021-06-05 09:12:48 +02:00