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50319 Commits

Author SHA1 Message Date
Eric Brown
1b73fbdf5e
gnu: Add r-rserve. 
* gnu/packages/cran.scm (r-rserve): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2020-04-30 13:08:33 +02:00
Guillaume Le Vaillant
f03e5ca59f
gnu: gnuradio: Fix runtime python environment for plugins. 
* gnu/packages/radio.scm (gnuradio)[native-search-paths]: Add PYTHONPATH.
  [native-inputs]: Move python ...
  [inputs]: ... here.
 2020-04-30 10:09:15 +02:00
Mark H Weaver
89ea0415b3
gnu: linux-libre: Update to 5.4.36. 
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.36.
(linux-libre-5.4-pristine-source): Update hash.
 2020-04-29 22:13:56 -04:00
Mark H Weaver
09b87e503d
gnu: linux-libre@5.6: Update to 5.6.8. 
* gnu/packages/linux.scm (linux-libre-5.6-version): Update to 5.6.8.
(linux-libre-5.6-pristine-source): Update hash.
 2020-04-29 22:13:15 -04:00
Mark H Weaver
5bc78570b2
gnu: linux-libre@4.19: Update to 4.19.119. 
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.119.
(linux-libre-4.19-pristine-source): Update hash.
 2020-04-29 22:12:10 -04:00
Ricardo Wurmus
851a3a779a
gnu: python-hacking: Update to 1.1.0. 
* gnu/packages/openstack.scm (python-hacking): Update to 1.1.0.
[arguments]: Add "delete-broken-test" phase.
[propagated-inputs]: Replace python-flake8-2.5 with python-flake8-2.6.
 2020-04-30 00:05:15 +02:00
Ricardo Wurmus
7b0e0fd5a2
gnu: python-flake8-2.5: Update to 2.6.2. 
* gnu/packages/python-xyz.scm (python-flake8-2.5): Update to 2.6.2; rename
it...
(python-flake8-2.6): ...to this.
[arguments]: Add phase "use-later-pycodestyles", and move "check" phase after
"install".
[propagated-inputs]: Explicitly list python-pycodestyle, python-entrypoints,
python-pyflakes-1.2, and python-mccabe.
 2020-04-30 00:05:15 +02:00
Ricardo Wurmus
7fea8e076f
gnu: Remove python2-flake8-2.5. 
* gnu/packages/python-xyz.scm (python2-flake8-2.5): Remove variable.
(python-flake8-2.5)[properties]: Remove.
 2020-04-30 00:05:15 +02:00
Ricardo Wurmus
a655924009
gnu: Replace python-pyflakes-0.8.1 with python-pyflakes-1.2. 
* gnu/packages/python-xyz.scm (python-pyflakes-0.8.1): Remove variable.
(python-pyflakes-1.2): New variable.
* gnu/packages/openstack.scm (python-hacking)[propagated-inputs]: Replace
python-pyflakes-0.8.1 with python-pyflakes-1.2.
 2020-04-30 00:05:14 +02:00
Ricardo Wurmus
37130eccd2
gnu: Remove python2-pyflakes-0.8.1. 
* gnu/packages/python-xyz.scm (python2-pyflakes-0.8.1): Remove variable.
 2020-04-30 00:05:14 +02:00
Ricardo Wurmus
7e3ddb6904
gnu: Add python-cmd2. 
* gnu/packages/python-xyz.scm (python-cmd2): New variable.
 2020-04-30 00:05:14 +02:00
Ricardo Wurmus
88f8a7c610
gnu: Add python-voluptuous. 
* gnu/packages/python-xyz.scm (python-voluptuous): New variable.
 2020-04-30 00:05:14 +02:00
Ricardo Wurmus
ad2736717a
gnu: python-psutil: Update to 5.7.0. 
* gnu/packages/python-xyz.scm (python-psutil): Update to 5.7.0.
 2020-04-30 00:05:10 +02:00
Marcin Karpezo
fd65311cf4
gnu: Add sbcl-stumpwm-pass. 
* gnu/packages/wm.scm (sbcl-stumpwm-pass): New variable.

Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
 2020-04-30 00:25:15 +03:00
Leo Famulari
fb5bb6bd9e
gnu: Magic Wormhole: Update to 0.12.0. 
* gnu/packages/magic-wormhole.scm (magic-wormhole): Update to 0.12.0.
 2020-04-29 16:52:29 -04:00
Leo Famulari
718c8837f9
gnu: magic-wormhole-transit-relay: Update to 0.2.1. 
* gnu/packages/magic-wormhole.scm (magic-wormhole-transit-relay): Update to
0.2.1.
 2020-04-29 16:52:29 -04:00
Leo Famulari
c5c25b39eb
gnu: magic-wormhole-mailbox-server: Update to 0.4.1. 
* gnu/packages/magic-wormhole.scm (magic-wormhole-mailbox-server): Update to
0.4.1.
 2020-04-29 16:52:25 -04:00
Marcin Karpezo
e118837ede
gnu: Add aspell-dict-pl. 
* gnu/packages/aspell.scm (aspell-dict-pl): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-04-29 22:50:20 +03:00
Lars-Dominik Braun
b9d96ed773
gnu: python-tortoise-orm: Update to 0.16.7 [security fixes]. 
* gnu/packages/databases.scm (python-tortoise-orm)[source]: Update to 0.16.7.
[propagated-inputs]: Propagate python-ciso8601, which is required in setup.py.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2020-04-29 15:12:15 -04:00
Lars-Dominik Braun
510472f865
gnu: python-pypika: Update to 0.37.2. 
* gnu/packages/databases.scm (python-pypika): Update to 0.37.2.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2020-04-29 15:12:15 -04:00
Lars-Dominik Braun
4b800bff80
gnu: python-aiosqlite: Update to 0.12.0. 
* gnu/packages/databases.scm (python-aiosqlite): Update to 0.12.0.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2020-04-29 15:12:15 -04:00
Leo Famulari
f224a8bb79
gnu: OpenLDAP: Update to 2.4.50 [fixes CVE-2019-{13057,13565}]. 
* gnu/packages/openldap.scm (openldap)[replacement]: Use openldap-2.4.50.
(openldap/fixed): Replace with ...
(openldap-2.4.50): ... new variable.
* gnu/packages/patches/openldap-CVE-2020-12243.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2020-04-29 13:44:10 -04:00
Tobias Geerinckx-Rice
19987f5efe
gnu: foo2zjs: Update to 20200426. 
* gnu/packages/cups.scm (foo2zjs): Update to 20200426.
 2020-04-29 19:31:23 +02:00
Oleg Pykhalov
587ccf4c79
gnu: emacs-vterm: Update to 0-1.e63bd65. 
* gnu/packages/emacs-xyz.scm (emacs-vterm): Update to 0-1.e63bd65.
 2020-04-29 20:10:33 +03:00
pinoaffe
1cc9947a53
gnu: Add emacs-kakoune. 
* gnu/packages/emacs-xyz.scm (emacs-kakoune): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2020-04-29 16:33:35 +02:00
pinoaffe
6d25f29143
gnu: Add emacs-ryo-modal. 
* gnu/packages/emacs-xyz.scm (emacs-ryo-modal): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2020-04-29 16:29:53 +02:00
Masaya Tojo
373c0dc95c
gnu: Add emacs-twittering-mode. 
* gnu/packages/emacs-xyz.scm (emacs-twittering-mode): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2020-04-29 16:26:21 +02:00
Ricardo Wurmus
e9f93cd5f7
gnu: Add python-sphinx-autobuild. 
* gnu/packages/sphinx.scm (python-sphinx-autobuild): New variable.
 2020-04-29 13:46:07 +02:00
Ricardo Wurmus
ff5ca61d15
gnu: Add python-doc8. 
* gnu/packages/python-xyz.scm (python-doc8): New variable.
 2020-04-29 13:46:07 +02:00
Ricardo Wurmus
d0e0b865e1
gnu: Add python-livereload. 
* gnu/packages/python-web.scm (python-livereload): New variable.
 2020-04-29 13:46:07 +02:00
Ricardo Wurmus
d08782d16c
gnu: Add python-port-for. 
* gnu/packages/python-web.scm (python-port-for): New variable.
 2020-04-29 13:46:07 +02:00
Ricardo Wurmus
39a96b99fe
gnu: Add python-restructuredtext-lint. 
* gnu/packages/python-xyz.scm (python-restructuredtext-lint): New variable.
 2020-04-29 13:46:07 +02:00
Raghav Gururajan
27cb52a20b
gnu: gnome-calendar: Propagate evolution-data-server. 
* gnu/packages/gnome.scm (gnome-calendar)[inputs]: Move evolution-data-server
from here...
[propagated-inputs]: ...to here.

Fixes <https://bugs.gnu.org/40686>.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2020-04-29 13:29:16 +02:00
Ricardo Wurmus
e979cea905
gnu: Remove python2-ws4py-for-kaldi-gstreamer-server. 
* gnu/packages/python-web.scm (python2-ws4py-for-kaldi-gstreamer-server):
Remove variable.
 2020-04-29 13:29:16 +02:00
Ricardo Wurmus
1228c2abcf
gnu: kaldi-gstreamer-server: Update to 0-2.f68cab4. 
* gnu/packages/machine-learning.scm (kaldi-gstreamer-server): Update to
0-2.f68cab4.
[inputs]: Replace python-2 with python-wrapper, python2-pygobject with
python-pygobject, python2-pyyaml with python-pyyaml, and python2-tornado with
python-tornado; remove python2-ws4py-for-kaldi-gstreamer-server and
python2-futures.
 2020-04-29 13:29:16 +02:00
Brice Waegeneire
8fe681b9ff
gnu: Add edid-decode. 
* gnu/packages/hardware.scm (edid-decode): New variable.

Signed-off-by: Mathieu Othacehe <m.othacehe@gmail.com>
 2020-04-29 11:38:42 +02:00
Alexandros Theodotou
4f0f46e4af
gnu: zrythm: Update to 0.8.333. 
* gnu/packages/music.scm (zrythm): Update to 0.8.333.
[inputs]: Add new dependencies graphviz and gtksourceview.

Signed-off-by: Jakub Kądziołka <kuba@kadziolka.net>
 2020-04-29 10:58:05 +02:00
Paul Garlick
da6539d17b
gnu: ikiwiki: Update to 3.20200202.3. 
* gnu/packages/web.scm (ikiwiki): Update to 3.20200202.3.
 2020-04-29 09:37:15 +01:00
Paul Garlick
2933cdf88e
gnu: ikiwiki: Translate documentation. 
* gnu/packages/web.scm (ikiwiki)[inputs]: Add po4a.
[arguments]<#:phases>[patch-Makefile]: Rename to...
[arguments]<#:phases>[patch-Makefiles]: ...this.  Add build environment
paths to the PERL5LIB environment variable that is used by the 'po2wiki'
script.
 2020-04-29 09:37:14 +01:00
Paul Garlick
cf47084a88
gnu: ikiwiki: Add missing inputs. 
* gnu/packages/web.scm (ikiwiki)[inputs]: Add perl-authen-passphrase,
perl-file-mimeinfo, perl-mail-sendmail and perl-xml-twig.
 2020-04-29 09:37:13 +01:00
Paul Garlick
b7392ecbba
gnu: ikiwiki: Propagate some inputs. 
* gnu/packages/web.scm (ikiwiki)[inputs]: Move perl-html-parser,
perl-html-scrubber, perl-html-template, perl-json,
perl-text-markdown-discount, perl-uri and perl-yaml-libyaml to...
[propagated-inputs]: ...here.  New field.
 2020-04-29 09:37:12 +01:00
Paul Garlick
732ffac3bc
gnu: ikiwiki: Build perl inputs for target architecture. 
* gnu/packages/web.scm (ikiwiki)[native-inputs]: Move perl dependencies ...
[inputs]: ...to here.
 2020-04-29 09:37:11 +01:00
Paul Garlick
add3e168bb
gnu: ikiwiki: Fetch sources from git repository. 
* gnu/packages/web.scm (ikiwiki)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
[source](snippet): New field.
[arguments]<#:phases>[set-modification-times]: New phase.
 2020-04-29 09:36:29 +01:00
Guillaume Le Vaillant
cf480830e2
gnu: gnuradio: Fix search paths for third-party blocks. 
* gnu/packages/radio.scm (gnuradio)[native-search-paths]: Add definition of
  the GRC_BLOCKS_PATH variable.
 2020-04-29 10:23:23 +02:00
Guillaume Le Vaillant
f93eebbf9c
gnu: Add xnec2c. 
* gnu/packages/radio.scm (xnec2c): New variable.
 2020-04-29 01:17:37 +02:00
Christopher Baines
709ca6c982
gnu: libgc/static-libs: Mark it as hidden. 
* gnu/packages/bdw-gc.scm (libgc/static-libs)[properties] Set hidden? to #t.
 2020-04-28 22:54:36 +01:00
Ludovic Courtès
1797fe1321
gnu: guile-json: Update to 3.5.0. 
* gnu/packages/guile.scm (guile-json-3): Update to 3.5.0.
 2020-04-28 23:28:17 +02:00
Ludovic Courtès
ce0f1b1eef
gnu: guix: Update to 619f918. 
* gnu/packages/package-management.scm (guix): Update to 619f918.
 2020-04-28 23:28:17 +02:00
Efraim Flashner
0b25812872
gnu: openldap: Fix CVE-2020-12243. 
* gnu/packages/openldap.scm (openldap)[replacement]: New field.
(openldap/fixed): New variable.
* gnu/packages/patches/openldap-CVE-2020-12243.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
 2020-04-28 22:52:20 +03:00
Efraim Flashner
cd8c419722
gnu: valgrind: Update source uri. 
* gnu/packages/valgrind.scm (valgrind)[source]: Remove valgrind host,
add sourceware host.
[home-page]: Use https.
 2020-04-28 22:33:40 +03:00
Pierre Neidhardt
27112236ce
gnu: sbcl: Update to 2.0.4. 
* gnu/packages/lisp.scm (sbcl): Update to 2.0.4.
 2020-04-28 21:10:46 +02:00
Pierre Neidhardt
a84b7a4af5
gnu: sbcl-parenscript: Update to 2.7.1. 
* gnu/packages/lisp-xyz.scm (sbcl-parenscript): Update to 2.7.1.
 2020-04-28 21:10:46 +02:00
Diego Nicola Barbato
19e1f12ce4
gnu: emacs-telega: Test Emacs environment on startup. 
Print a more helpful error message when someone attempts to run Telega on an
incompatible Emacs (e.g a 32-bit Emacs without wide ints).

* gnu/packages/patches/emacs-telega-test-env.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/emacs-xyz.scm (emacs-telega)[source]: Use it.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-04-28 20:44:30 +03:00
Diego Nicola Barbato
a663b7040c
gnu: emacs-telega: Build with emacs-wide-int on 32-bit systems. 
Fixes <https://bugs.gnu.org/39406>.
Reported by <lmedeiros@riseup.net>.

* gnu/packages/emacs-xyz.scm (emacs-telega)[native-inputs]: Replace emacs with
emacs-wide-int on 32-bit systems.  This is needed because Telega requires
64-bit wide ints.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-04-28 20:44:30 +03:00
Diego Nicola Barbato
abbca232ca
gnu: Add emacs-wide-int. 
* gnu/packages/emacs.scm (emacs-wide-int): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-04-28 20:44:27 +03:00
Christopher Lemmer Webber
b2c1d4a273
gnu: Add emacs-magit-annex. 
* gnu/packages/emacs-xyz.scm (emacs-magit-annex): New variable.
 2020-04-28 12:30:41 -04:00
Alexandros Theodotou
ae0f26b8f4
gnu: lv2: Update to 1.18.0. 
* gnu/packages/audio.scm (lv2): Update to 1.18.0.

Signed-off-by: Jakub Kądziołka <kuba@kadziolka.net>
 2020-04-28 18:20:28 +02:00
Nicolas Goaziou
3b33e0e4ba
gnu: kakoune: Update to 2020.01.16. 
* gnu/packages/text-editors.scm (kakoune): Update to 2020.01.16.
 2020-04-28 18:18:44 +02:00
John Soo
9615c8511f
gnu: emacs-evil-org: Update to 1.0.2. 
* gnu/packages/emacs-xyz.scm (emacs-evil-org): Update to 1.0.2.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2020-04-28 17:30:50 +02:00
Joseph LaFreniere
f15d324afa
gnu: emacs-sx: Update to 20191229. 
* gnu/packages/emacs-xyz.scm (emacs-sx): Update to 20191229.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2020-04-28 17:29:51 +02:00
Joseph LaFreniere
b3d04190f4
gnu: Add emacs-toml-mode. 
* gnu/packages/emacs-xyz.scm (emacs-toml-mode): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2020-04-28 17:27:47 +02:00
Efraim Flashner
2f823fb493
gnu: libjpeg-turbo: Fix building on powerpc. 
* gnu/packages/image.scm (libjpeg-turbo)[arguments]: Add configure-flags
specific to powerpc to fix building and cross-building.
 2020-04-28 17:00:18 +03:00
Marius Bakke
587398d2a8
gnu: custom-gcc: Ensure #:modules are not overridden by the inherited GCC. 
This fixes a regression introduced in 56c833ea28
where the #:modules argument became ineffective.  Reported by Efraim Flashner
in <https://lists.gnu.org/archive/html/guix-devel/2020-04/msg00473.html>

* gnu/packages/gcc.scm (custom-gcc)[arguments]: Add #:modules through
SUBSTITUTE-KEYWORD-ARGUMENTS.
 2020-04-28 15:11:19 +02:00
Marius Bakke
a7a8337b28
gnu: artanis: Use guile2.2-readline. 
* gnu/packages/guile-xyz.scm (artanis)[propagated-inputs]: Change from
GUILE-READLINE to GUILE2.2-READLINE.
 2020-04-28 15:11:18 +02:00
Marius Bakke
085948fbfc
gnu: ungoogled-chromium: Update to 81.0.4044.129-0.c2a89fb [security fixes]. 
This fixes CVE-2020-6462 and CVE-2020-6461.

* gnu/packages/chromium.scm (%chromium-version): Set to 81.0.4044.129.
(%ungoogled-revision): Set to c2a89fb6b5b559c826796c811741fa8ed3e11de8.
(%chromium-origin, %ungoogled-origin): Update hashes.
 2020-04-28 14:38:38 +02:00
Ricardo Wurmus
545e12f40d
gnu: Add variant-tools. 
* gnu/packages/bioinformatics.scm (variant-tools): New variable.
 2020-04-28 12:23:28 +02:00
Ricardo Wurmus
0b2c883828
gnu: Add hdf5-blosc. 
* gnu/packages/maths.scm (hdf5-blosc): New variable.
 2020-04-28 12:23:28 +02:00
Ricardo Wurmus
9a2fcb6325
gnu: Add c-blosc. 
* gnu/packages/compression.scm (c-blosc): New variable.
 2020-04-28 12:23:28 +02:00
Boris A. Dekshteyn
83812f34d7
gnu: Add kbdd-0.7.1 
* gnu/packages/xdisorg.scm (kbdd): New variable.

Signed-off-by: Jakub Kądziołka <kuba@kadziolka.net>
 2020-04-28 11:51:06 +02:00
Pierre Neidhardt
8ac4be51de
gnu: ecl: Update to 20.4.24. 
* gnu/packages/lisp.scm (ecl): Update to 20.4.24.
[native-inputs]: Add texinfo to make the manual.
[license]: Set to lgpl2.1+.
 2020-04-28 11:47:46 +02:00
Pierre Neidhardt
143eaa82d6
gnu: sbcl-cl-cffi-gtk: Link source to parent to reduce closure size. 
* gnu/packages/lisp-xyz.scm (sbcl-cl-cffi-gtk)[arguments]: Replace source
  folder with link to the same folder in the sbcl-cl-cffi-gtk-glib dependency.
 2020-04-28 11:47:46 +02:00
Pierre Neidhardt
80d8c00c84
gnu: sbcl-cl-cffi-gtk-gdk: Link source to parent to reduce closure size. 
* gnu/packages/lisp-xyz.scm (sbcl-cl-cffi-gtk-gdk)[arguments]: Replace source
  folder with link to the same folder in the sbcl-cl-cffi-gtk-glib dependency.
 2020-04-28 11:47:45 +02:00
Pierre Neidhardt
2666a3361e
gnu: sbcl-cl-cffi-gtk-gdk-pixbuf: Link source to parent to reduce closure size. 
* gnu/packages/lisp-xyz.scm (sbcl-cl-cffi-gtk-gdk-pixbuf)[arguments]: Replace source
  folder with link to the same folder in the sbcl-cl-cffi-gtk-glib dependency.
 2020-04-28 11:47:45 +02:00
Pierre Neidhardt
d27f033f97
gnu: sbcl-cl-cffi-gtk-pango: Link source to parent to reduce closure size. 
* gnu/packages/lisp-xyz.scm (sbcl-cl-cffi-gtk-pango)[arguments]: Replace source
  folder with link to the same folder in the sbcl-cl-cffi-gtk-glib dependency.
 2020-04-28 11:47:45 +02:00
Pierre Neidhardt
8f46a9d67f
gnu: sbcl-cl-cffi-gtk-cairo: Link source to parent to reduce closure size. 
* gnu/packages/lisp-xyz.scm (sbcl-cl-cffi-gtk-cairo)[arguments]: Replace source
  folder with link to the same folder in the sbcl-cl-cffi-gtk-glib dependency.
 2020-04-28 11:47:45 +02:00
Pierre Neidhardt
6a7f366864
gnu: sbcl-cl-cffi-gtk-gio: Link source to parent to reduce closure size. 
* gnu/packages/lisp-xyz.scm (sbcl-cl-cffi-gtk-gio)[arguments]: Replace source
  folder with link to the same folder in the sbcl-cl-cffi-gtk-glib dependency.
 2020-04-28 11:47:45 +02:00
Pierre Neidhardt
eac71f54fe
gnu: sbcl-cl-cffi-gtk-gobject: Link source to parent to reduce closure size. 
* gnu/packages/lisp-xyz.scm (sbcl-cl-cffi-gtk-gobject)[arguments]: Replace source
  folder with link to the same folder in the sbcl-cl-cffi-gtk-glib dependency.
 2020-04-28 11:47:45 +02:00
Pierre Neidhardt
ef3cc2d883
gnu: Add emacs-trashed. 
* gnu/packages/emacs-xyz.scm (emacs-trashed): New variable.
 2020-04-28 11:47:45 +02:00
Guillaume Le Vaillant
62d45e463c
gnu: gnuradio-osmosdr: Add hackrf support. 
* gnu/packages/radio.scm (gnuradio-osmosdr)[inputs]: Add hackrf.
 2020-04-28 10:17:08 +02:00
Christopher Howard
79c4fb4f36
gnu: Add hackrf. 
* gnu/packages/radio.scm (hackrf): New variable.

Co-authored-by: Guillaume Le Vaillant <glv@posteo.net>
 2020-04-28 10:17:08 +02:00
Roel Janssen
0ae8505288
gnu: hpcguix-web: Use guile3.0-guix. 
* gnu/packages/web.scm (hpcguix-web): Update to latest revision and use
  guile3.0 inputs.
 2020-04-28 10:13:30 +02:00
Konrad Hinsen
d9e9a26176
gnu: python-scikit-learn: Make python-joblib a propagated input. 
* gnu/packages/machine-learning.scm (python-scikit-learn)
[native-inputs]: Move 'python-joblib' to ...
[propagated-inputs]: ... here.

Signed-off-by: Mathieu Othacehe <m.othacehe@gmail.com>
 2020-04-28 09:34:29 +02:00
Ricardo Wurmus
b3cf5f8601
gnu: gst-kaldi-nnet2-online: Update to 0-2.cb227ef. 
* gnu/packages/machine-learning.scm (gst-kaldi-nnet2-online): Update to
0-2.cb227ef.
 2020-04-28 08:44:04 +02:00
Ricardo Wurmus
0877b74f6e
gnu: kaldi: Update to 0-2.d4791c0. 
* gnu/packages/machine-learning.scm (kaldi): Update to 0-2.d4791c0.
 2020-04-28 08:44:04 +02:00
Ricardo Wurmus
9c726c485a
gnu: r-hdf5array: Update to 1.14.4. 
* gnu/packages/bioinformatics.scm (r-hdf5array): Update to 1.14.4.
 2020-04-28 08:44:04 +02:00
Ricardo Wurmus
cda0683295
gnu: r-seurat: Update to 3.1.5. 
* gnu/packages/bioinformatics.scm (r-seurat): Update to 3.1.5.
[propagated-inputs]: Remove r-metap.
 2020-04-28 08:44:04 +02:00
Ricardo Wurmus
ed720abc26
gnu: r-topicmodels: Update to 0.2-11. 
* gnu/packages/cran.scm (r-topicmodels): Update to 0.2-11.
 2020-04-28 08:44:04 +02:00
Ricardo Wurmus
1d9e71ed29
gnu: r-stopwords: Update to 2.0. 
* gnu/packages/cran.scm (r-stopwords): Update to 2.0.
[propagated-inputs]: Add r-desc and r-usethis.
 2020-04-28 08:44:04 +02:00
Ricardo Wurmus
2c439cae92
gnu: r-fda: Update to 5.1.4. 
* gnu/packages/cran.scm (r-fda): Update to 5.1.4.
 2020-04-28 08:44:04 +02:00
Ricardo Wurmus
e1fe5e9bed
gnu: r-abtest: Update to 0.2.1. 
* gnu/packages/cran.scm (r-abtest): Update to 0.2.1.
[propagated-inputs]: Add r-qgam; remove r-vgam.
 2020-04-28 08:44:04 +02:00
Ricardo Wurmus
169f9fe13a
gnu: Add r-qgam. 
* gnu/packages/cran.scm (r-qgam): New variable.
 2020-04-28 08:44:03 +02:00
Ricardo Wurmus
5ffe706b84
gnu: r-systemfonts: Update to 0.2.0. 
* gnu/packages/cran.scm (r-systemfonts): Update to 0.2.0.
[inputs]: Remove freetype.
[native-inputs]: Add r-knitr.
 2020-04-28 08:44:03 +02:00
Ricardo Wurmus
8165bf6d90
gnu: r-dalex: Update to 1.2.0. 
* gnu/packages/cran.scm (r-dalex): Update to 1.2.0.
[propagated-inputs]: Add r-ibreakdown and r-ingredients.
 2020-04-28 08:44:03 +02:00
Ricardo Wurmus
1816cb262c
gnu: r-rex: Update to 1.2.0. 
* gnu/packages/cran.scm (r-rex): Update to 1.2.0.
[propagated-inputs]: Remove r-magrittr.
[native-inputs]: Add r-knitr.
 2020-04-28 08:44:03 +02:00
Ricardo Wurmus
838ec254a0
gnu: r-optparse: Update to 1.6.6. 
* gnu/packages/cran.scm (r-optparse): Update to 1.6.6.
[native-inputs]: Add r-knitr.
 2020-04-28 08:44:03 +02:00
Ricardo Wurmus
bf4e440c19
gnu: r-sf: Update to 0.9-2. 
* gnu/packages/cran.scm (r-sf): Update to 0.9-2.
 2020-04-28 08:44:03 +02:00
Ricardo Wurmus
5123ec7858
gnu: r-future-apply: Update to 1.5.0. 
* gnu/packages/cran.scm (r-future-apply): Update to 1.5.0.
 2020-04-28 08:44:03 +02:00
Ricardo Wurmus
c6eb1fe616
gnu: r-etm: Update to 1.1. 
* gnu/packages/cran.scm (r-etm): Update to 1.1.
 2020-04-28 08:44:03 +02:00
Ricardo Wurmus
fbcbf8d586
gnu: r-future: Update to 1.17.0. 
* gnu/packages/cran.scm (r-future): Update to 1.17.0.
 2020-04-28 08:44:03 +02:00
Ricardo Wurmus
d62d838bf9
gnu: r-protviz: Update to 0.6.4. 
* gnu/packages/cran.scm (r-protviz): Update to 0.6.4.
 2020-04-28 08:44:03 +02:00