sthen
0876f6e643
REGRESS_DEPENDS=${RUN_DEPENDS}; no package change
2009-05-19 10:35:19 +00:00
jasper
5a08fd2f41
- update nutdb to 14.3
...
from benoit lecocq, with some tweaks
2009-04-02 13:24:30 +00:00
naddy
849955ef09
fix link order for static linking
2009-03-24 14:51:04 +00:00
espie
a59532691d
bump for python dep
2009-03-11 08:07:56 +00:00
kili
d6195c119a
MODPY_EXPAT_DEPENDS doesn't exist any longer.
...
While here, update PLISTs, some WANTLIBs, some license
markers and use MODPY_EGG_VERSION where it may help to
keep future PLIST diffs smaller.
help, nitpicking and ok jasper@, ok wcmaier@
note that print/py-reportlab/reportlab needs some more
love.
2009-01-03 21:27:25 +00:00
jasper
95a4c7ce27
- update nutdb to 14.0
2008-10-24 12:25:29 +00:00
sthen
1a9efa54ec
bump packages with Perl .so modules; the old ones don't work
...
with new perl and the package signature doesn't change, so we
have to do this ourselves to make pkg_add updates work.
ok simon@
2008-10-02 20:32:18 +00:00
jasper
13911bd3b9
- update emboss to the latest stable version, 6.0.1
2008-09-24 17:14:26 +00:00
jasper
ddfa68651b
- add p5-Bio-ASN1-EntrezGene
2008-09-24 13:37:27 +00:00
jasper
ddc0be8edf
import p5-Bio-ASN1-EntrezGene 1.091
...
Bio::ASN1::EntrezGene is a regular expression-based Perl Parser for NCBI
Entrez Gene genome databases
(http://www.ncbi.nih.gov/entrez/query.fcgi?db=gene ). It parses an
ASN.1-formatted Entrez Gene record and returns a data structure that
contains all data items from the gene record.
2008-09-24 13:36:21 +00:00
jasper
3f7b1e2bf1
- update AcePerl to 1.91
...
ok simon@
2008-09-23 20:57:20 +00:00
jasper
09d4dc6d7e
- update nutdb to 13.9
...
- update HOMEPAGE
- remove maintainer who has been inactive/unresponsive for years
2008-09-22 08:13:28 +00:00
jasper
ffb906e4e2
- update nutdb to 13.5
...
maintainer time-out.
2008-04-11 09:15:49 +00:00
jasper
1067ad1896
fix build on mips64.
...
no bump, because !mips64 packages didn't change, and mips64 didn't package.
ok mbalmer@ (some time ago)
2008-02-10 18:23:24 +00:00
okan
fc0db83b02
update to 1.44 from Will Maier (new MAINTAINER)
...
ok merdely
2008-01-12 02:00:24 +00:00
winiger
353c3a971f
change dependency to flavored python product
...
ok simon@,mbalmer@
2008-01-11 09:25:59 +00:00
bernd
c26229397e
emboss and pscan both install ${LOCALBASE}/bin/pscan.
...
Add @conflict markers.
2007-11-06 06:30:32 +00:00
ajacoutot
756427d1a0
- register egg-info file in PLIST
2007-11-02 10:10:11 +00:00
ajacoutot
137c1a3458
- bring ed(1) to the rescue ; it looks like my latest "fix" was too late
...
(I will now hide...)
input by and ok pyr@
2007-10-19 08:38:24 +00:00
ajacoutot
cb53492933
- oops, got bitten by CVS ; sorry about that
2007-10-19 06:44:36 +00:00
ajacoutot
064f8ab515
- really unbreak
...
noticed by Stephan Andre' <andres at msu dot edu>, thanks!
2007-10-18 20:56:59 +00:00
ajacoutot
da653f2cb9
- make it package again
...
- bump (new python version)
2007-10-18 15:22:15 +00:00
steven
cdb3268835
+emboss
2007-09-25 08:23:38 +00:00
steven
2f69c61a4a
initial import of EMBOSS 5.0.0
...
European Molecular Biology Open Software Suite
2007-09-25 08:23:02 +00:00
sthen
d2f4eba081
ace.pl(1) manpage is generated but useless; @comment it to avoid
...
"Couldn't find subject in old manpage /usr/local/man/man1/ace.pl.1
Unknown manpage type /usr/local/man/man1/ace.pl.1" at pkg_add.
P5ARCH is in base file sets anyway, remove from PLIST.
ok merdely@
2007-09-18 23:36:54 +00:00
simon
e9d64e5841
remove surrounding quotes from COMMENT
2007-09-15 21:32:05 +00:00
jasper
be202ef2f9
update nutdb to 12.5
2007-06-11 21:02:40 +00:00
espie
807b2c46da
shorten comment
2007-05-17 10:52:25 +00:00
espie
470294650d
base64 distinfo with SHA256
2007-04-05 15:37:40 +00:00
martynas
74afee703e
update to nutdb-12.4
...
ok steven@
2007-03-31 08:58:30 +00:00
jasper
85ee819f85
update nutdb to 12.3
2007-02-02 14:32:52 +00:00
jasper
b0fddd23c7
fix PKGNAME, noticed by Stuart Henderson
...
regen patch while there.
2007-01-31 13:43:27 +00:00
jasper
5a7554c2b7
update nutdb to 12.0
...
(no response from maintainer)
2006-11-30 17:38:27 +00:00
steven
26b92847b2
master site fixes
2006-07-13 07:43:40 +00:00
alek
215e64d3a2
Bump PKGNAME after recent python switch; regen PLIST
2006-06-03 09:23:14 +00:00
alek
440c0f2686
Fix build with python 2.4
...
problem spotted and ok steven@
2005-12-18 20:33:17 +00:00
alek
1d6d4168a4
Update to 1.41
2005-12-03 22:34:52 +00:00
bernd
f123e951b5
- Fix some file modes here as well.
...
- update-patches while I'm here
- bump PKGNAME
ok niallo@
2005-11-01 17:18:15 +00:00
xsa
2575f38933
job changed :-( so did work environment.
...
drop maintainership as I do not often use those anymore...
2005-10-25 18:37:14 +00:00
naddy
307564922b
add missing description
2005-05-26 21:18:46 +00:00
alek
260ce5cd00
Add WANTLIB marker
2005-03-11 17:01:28 +00:00
espie
e6da792b99
+bioperl
2005-03-03 01:42:56 +00:00
espie
c0e8fe3062
bioperl is a big suite of perl modules and scripts for bioinformatics:
...
sequence comparisons and interfaces to various biological databases.
2005-03-03 01:42:12 +00:00
espie
39123c1737
add AcePerl modules
2005-03-03 00:11:47 +00:00
espie
ceb9f444a3
ACEDB is an OO database specialized in genome issues,
...
AcePerl yields an interface to it.
2005-03-03 00:10:54 +00:00
naddy
1463a06ce3
update to 10.15; from maintainer Jon Trembley <jon@brain-box.net>
2005-02-07 17:34:23 +00:00
espie
86482b9616
fix build when biopython is already installed.
2005-01-16 14:26:19 +00:00
naddy
199c30b4ac
SIZE
2005-01-05 15:47:05 +00:00
sturm
a7022f3ea3
update to nutdb 10.12
...
new recipe-guess algorithm
from maintainer Jon Trembley <jon at brain-box.net>
2004-12-25 19:35:34 +00:00
xsa
cbe08f8a8a
Update to nutdb-10.11;
...
based on diff from MAINTAINER Jon Trembley <jon at brain-box dot net>
2004-12-05 11:52:17 +00:00
