cpet/openbsd-ports
1
0
Fork 0
Code Issues Pull Requests Packages Projects Releases Wiki Activity

use MODPY_PEP517

Browse Source
This commit is contained in:
sthen 2022-09-10 21:52:11 +00:00
parent 6b85aa2a4e
commit d5f1ddc420
8 changed files with 353 additions and 31 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

2
biology/py-biopython/Makefile
View File

@ -16,7 +16,7 @@ PERMIT_PACKAGE = Yes
MODULES = lang/python
MODPY_PI = Yes
MODPY_SETUPTOOLS = Yes
MODPY_PEP517 = setuptools
FLAVORS = python3
FLAVOR = python3

2
biology/py-biopython/patches/patch-Tests_run_tests_py
View File

@ -1,7 +1,7 @@
Index: Tests/run_tests.py
--- Tests/run_tests.py.orig
+++ Tests/run_tests.py
@@ -150,13 +150,10 @@ def main(argv):
@@ -149,13 +149,10 @@ def main(argv):
# A. Because Martel may not be in ../build/lib.*
test_path = sys.path[0] or "."
source_path = os.path.abspath("%s/.." % test_path)

328
biology/py-biopython/pkg/PLIST
View File

@ -1,11 +1,11 @@
lib/python${MODPY_VERSION}/
lib/python${MODPY_VERSION}/site-packages/
lib/python${MODPY_VERSION}/site-packages/Bio/
lib/python${MODPY_VERSION}/site-packages/Bio/Affy/
lib/python${MODPY_VERSION}/site-packages/Bio/Affy/CelFile.py
lib/python${MODPY_VERSION}/site-packages/Bio/Affy/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/Affy/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/Affy/${MODPY_PYCACHE}CelFile.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Affy/${MODPY_PYCACHE}CelFile.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Affy/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Affy/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Align/
lib/python${MODPY_VERSION}/site-packages/Bio/Align/AlignInfo.py
@ -21,25 +21,38 @@ lib/python${MODPY_VERSION}/site-packages/Bio/Align/Applications/_Probcons.py
lib/python${MODPY_VERSION}/site-packages/Bio/Align/Applications/_TCoffee.py
lib/python${MODPY_VERSION}/site-packages/Bio/Align/Applications/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/Align/Applications/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/Align/Applications/${MODPY_PYCACHE}_ClustalOmega.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Align/Applications/${MODPY_PYCACHE}_ClustalOmega.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Align/Applications/${MODPY_PYCACHE}_Clustalw.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Align/Applications/${MODPY_PYCACHE}_Clustalw.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Align/Applications/${MODPY_PYCACHE}_Dialign.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Align/Applications/${MODPY_PYCACHE}_Dialign.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Align/Applications/${MODPY_PYCACHE}_MSAProbs.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Align/Applications/${MODPY_PYCACHE}_MSAProbs.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Align/Applications/${MODPY_PYCACHE}_Mafft.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Align/Applications/${MODPY_PYCACHE}_Mafft.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Align/Applications/${MODPY_PYCACHE}_Muscle.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Align/Applications/${MODPY_PYCACHE}_Muscle.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Align/Applications/${MODPY_PYCACHE}_Prank.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Align/Applications/${MODPY_PYCACHE}_Prank.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Align/Applications/${MODPY_PYCACHE}_Probcons.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Align/Applications/${MODPY_PYCACHE}_Probcons.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Align/Applications/${MODPY_PYCACHE}_TCoffee.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Align/Applications/${MODPY_PYCACHE}_TCoffee.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Align/Applications/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Align/Applications/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Align/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/Align/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/Align/${MODPY_PYCACHE}AlignInfo.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Align/${MODPY_PYCACHE}AlignInfo.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Align/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Align/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Align/_aligners.c
@so lib/python${MODPY_VERSION}/site-packages/Bio/Align/_aligners.${MODPY_PYC_MAGIC_TAG}so
lib/python${MODPY_VERSION}/site-packages/Bio/Align/substitution_matrices/
lib/python${MODPY_VERSION}/site-packages/Bio/Align/substitution_matrices/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/Align/substitution_matrices/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/Align/substitution_matrices/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Align/substitution_matrices/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Align/substitution_matrices/data/
lib/python${MODPY_VERSION}/site-packages/Bio/Align/substitution_matrices/data/BENNER22
@ -82,24 +95,37 @@ lib/python${MODPY_VERSION}/site-packages/Bio/AlignIO/PhylipIO.py
lib/python${MODPY_VERSION}/site-packages/Bio/AlignIO/StockholmIO.py
lib/python${MODPY_VERSION}/site-packages/Bio/AlignIO/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/AlignIO/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/AlignIO/${MODPY_PYCACHE}ClustalIO.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/AlignIO/${MODPY_PYCACHE}ClustalIO.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/AlignIO/${MODPY_PYCACHE}EmbossIO.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/AlignIO/${MODPY_PYCACHE}EmbossIO.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/AlignIO/${MODPY_PYCACHE}FastaIO.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/AlignIO/${MODPY_PYCACHE}FastaIO.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/AlignIO/${MODPY_PYCACHE}Interfaces.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/AlignIO/${MODPY_PYCACHE}Interfaces.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/AlignIO/${MODPY_PYCACHE}MafIO.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/AlignIO/${MODPY_PYCACHE}MafIO.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/AlignIO/${MODPY_PYCACHE}MauveIO.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/AlignIO/${MODPY_PYCACHE}MauveIO.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/AlignIO/${MODPY_PYCACHE}MsfIO.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/AlignIO/${MODPY_PYCACHE}MsfIO.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/AlignIO/${MODPY_PYCACHE}NexusIO.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/AlignIO/${MODPY_PYCACHE}NexusIO.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/AlignIO/${MODPY_PYCACHE}PhylipIO.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/AlignIO/${MODPY_PYCACHE}PhylipIO.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/AlignIO/${MODPY_PYCACHE}StockholmIO.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/AlignIO/${MODPY_PYCACHE}StockholmIO.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/AlignIO/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/AlignIO/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Alphabet/
lib/python${MODPY_VERSION}/site-packages/Bio/Alphabet/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/Alphabet/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/Alphabet/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Alphabet/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Application/
lib/python${MODPY_VERSION}/site-packages/Bio/Application/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/Application/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/Application/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Application/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Blast/
lib/python${MODPY_VERSION}/site-packages/Bio/Blast/Applications.py
@ -109,19 +135,27 @@ lib/python${MODPY_VERSION}/site-packages/Bio/Blast/ParseBlastTable.py
lib/python${MODPY_VERSION}/site-packages/Bio/Blast/Record.py
lib/python${MODPY_VERSION}/site-packages/Bio/Blast/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/Blast/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/Blast/${MODPY_PYCACHE}Applications.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Blast/${MODPY_PYCACHE}Applications.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Blast/${MODPY_PYCACHE}NCBIWWW.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Blast/${MODPY_PYCACHE}NCBIWWW.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Blast/${MODPY_PYCACHE}NCBIXML.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Blast/${MODPY_PYCACHE}NCBIXML.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Blast/${MODPY_PYCACHE}ParseBlastTable.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Blast/${MODPY_PYCACHE}ParseBlastTable.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Blast/${MODPY_PYCACHE}Record.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Blast/${MODPY_PYCACHE}Record.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Blast/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Blast/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/CAPS/
lib/python${MODPY_VERSION}/site-packages/Bio/CAPS/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/CAPS/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/CAPS/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/CAPS/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Cluster/
lib/python${MODPY_VERSION}/site-packages/Bio/Cluster/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/Cluster/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/Cluster/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Cluster/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
@so lib/python${MODPY_VERSION}/site-packages/Bio/Cluster/_cluster.${MODPY_PYC_MAGIC_TAG}so
lib/python${MODPY_VERSION}/site-packages/Bio/Cluster/cluster.c
@ -130,6 +164,7 @@ lib/python${MODPY_VERSION}/site-packages/Bio/Cluster/clustermodule.c
lib/python${MODPY_VERSION}/site-packages/Bio/Compass/
lib/python${MODPY_VERSION}/site-packages/Bio/Compass/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/Compass/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/Compass/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Compass/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Data/
lib/python${MODPY_VERSION}/site-packages/Bio/Data/CodonTable.py
@ -137,9 +172,13 @@ lib/python${MODPY_VERSION}/site-packages/Bio/Data/IUPACData.py
lib/python${MODPY_VERSION}/site-packages/Bio/Data/SCOPData.py
lib/python${MODPY_VERSION}/site-packages/Bio/Data/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/Data/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/Data/${MODPY_PYCACHE}CodonTable.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Data/${MODPY_PYCACHE}CodonTable.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Data/${MODPY_PYCACHE}IUPACData.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Data/${MODPY_PYCACHE}IUPACData.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Data/${MODPY_PYCACHE}SCOPData.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Data/${MODPY_PYCACHE}SCOPData.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Data/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Data/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Emboss/
lib/python${MODPY_VERSION}/site-packages/Bio/Emboss/Applications.py
@ -147,9 +186,13 @@ lib/python${MODPY_VERSION}/site-packages/Bio/Emboss/Primer3.py
lib/python${MODPY_VERSION}/site-packages/Bio/Emboss/PrimerSearch.py
lib/python${MODPY_VERSION}/site-packages/Bio/Emboss/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/Emboss/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/Emboss/${MODPY_PYCACHE}Applications.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Emboss/${MODPY_PYCACHE}Applications.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Emboss/${MODPY_PYCACHE}Primer3.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Emboss/${MODPY_PYCACHE}Primer3.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Emboss/${MODPY_PYCACHE}PrimerSearch.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Emboss/${MODPY_PYCACHE}PrimerSearch.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Emboss/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Emboss/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Entrez/
lib/python${MODPY_VERSION}/site-packages/Bio/Entrez/DTDs/
@ -406,7 +449,9 @@ lib/python${MODPY_VERSION}/site-packages/Bio/Entrez/XSDs/
lib/python${MODPY_VERSION}/site-packages/Bio/Entrez/XSDs/IPGReportSet.xsd
lib/python${MODPY_VERSION}/site-packages/Bio/Entrez/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/Entrez/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/Entrez/${MODPY_PYCACHE}Parser.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Entrez/${MODPY_PYCACHE}Parser.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Entrez/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Entrez/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/ExPASy/
lib/python${MODPY_VERSION}/site-packages/Bio/ExPASy/Enzyme.py
@ -415,11 +460,17 @@ lib/python${MODPY_VERSION}/site-packages/Bio/ExPASy/Prosite.py
lib/python${MODPY_VERSION}/site-packages/Bio/ExPASy/ScanProsite.py
lib/python${MODPY_VERSION}/site-packages/Bio/ExPASy/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/ExPASy/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/ExPASy/${MODPY_PYCACHE}Enzyme.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/ExPASy/${MODPY_PYCACHE}Enzyme.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/ExPASy/${MODPY_PYCACHE}Prodoc.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/ExPASy/${MODPY_PYCACHE}Prodoc.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/ExPASy/${MODPY_PYCACHE}Prosite.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/ExPASy/${MODPY_PYCACHE}Prosite.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/ExPASy/${MODPY_PYCACHE}ScanProsite.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/ExPASy/${MODPY_PYCACHE}ScanProsite.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/ExPASy/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/ExPASy/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/ExPASy/${MODPY_PYCACHE}cellosaurus.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/ExPASy/${MODPY_PYCACHE}cellosaurus.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/ExPASy/cellosaurus.py
lib/python${MODPY_VERSION}/site-packages/Bio/File.py
@ -428,16 +479,22 @@ lib/python${MODPY_VERSION}/site-packages/Bio/GenBank/Record.py
lib/python${MODPY_VERSION}/site-packages/Bio/GenBank/Scanner.py
lib/python${MODPY_VERSION}/site-packages/Bio/GenBank/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/GenBank/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/GenBank/${MODPY_PYCACHE}Record.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/GenBank/${MODPY_PYCACHE}Record.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/GenBank/${MODPY_PYCACHE}Scanner.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/GenBank/${MODPY_PYCACHE}Scanner.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/GenBank/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/GenBank/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/GenBank/${MODPY_PYCACHE}utils.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/GenBank/${MODPY_PYCACHE}utils.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/GenBank/utils.py
lib/python${MODPY_VERSION}/site-packages/Bio/Geo/
lib/python${MODPY_VERSION}/site-packages/Bio/Geo/Record.py
lib/python${MODPY_VERSION}/site-packages/Bio/Geo/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/Geo/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/Geo/${MODPY_PYCACHE}Record.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Geo/${MODPY_PYCACHE}Record.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Geo/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Geo/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Graphics/
lib/python${MODPY_VERSION}/site-packages/Bio/Graphics/BasicChromosome.py
@ -459,27 +516,46 @@ lib/python${MODPY_VERSION}/site-packages/Bio/Graphics/GenomeDiagram/_LinearDrawe
lib/python${MODPY_VERSION}/site-packages/Bio/Graphics/GenomeDiagram/_Track.py
lib/python${MODPY_VERSION}/site-packages/Bio/Graphics/GenomeDiagram/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/Graphics/GenomeDiagram/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/Graphics/GenomeDiagram/${MODPY_PYCACHE}_AbstractDrawer.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Graphics/GenomeDiagram/${MODPY_PYCACHE}_AbstractDrawer.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Graphics/GenomeDiagram/${MODPY_PYCACHE}_CircularDrawer.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Graphics/GenomeDiagram/${MODPY_PYCACHE}_CircularDrawer.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Graphics/GenomeDiagram/${MODPY_PYCACHE}_Colors.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Graphics/GenomeDiagram/${MODPY_PYCACHE}_Colors.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Graphics/GenomeDiagram/${MODPY_PYCACHE}_CrossLink.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Graphics/GenomeDiagram/${MODPY_PYCACHE}_CrossLink.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Graphics/GenomeDiagram/${MODPY_PYCACHE}_Diagram.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Graphics/GenomeDiagram/${MODPY_PYCACHE}_Diagram.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Graphics/GenomeDiagram/${MODPY_PYCACHE}_Feature.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Graphics/GenomeDiagram/${MODPY_PYCACHE}_Feature.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Graphics/GenomeDiagram/${MODPY_PYCACHE}_FeatureSet.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Graphics/GenomeDiagram/${MODPY_PYCACHE}_FeatureSet.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Graphics/GenomeDiagram/${MODPY_PYCACHE}_Graph.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Graphics/GenomeDiagram/${MODPY_PYCACHE}_Graph.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Graphics/GenomeDiagram/${MODPY_PYCACHE}_GraphSet.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Graphics/GenomeDiagram/${MODPY_PYCACHE}_GraphSet.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Graphics/GenomeDiagram/${MODPY_PYCACHE}_LinearDrawer.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Graphics/GenomeDiagram/${MODPY_PYCACHE}_LinearDrawer.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Graphics/GenomeDiagram/${MODPY_PYCACHE}_Track.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Graphics/GenomeDiagram/${MODPY_PYCACHE}_Track.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Graphics/GenomeDiagram/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Graphics/GenomeDiagram/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Graphics/KGML_vis.py
lib/python${MODPY_VERSION}/site-packages/Bio/Graphics/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/Graphics/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/Graphics/${MODPY_PYCACHE}BasicChromosome.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Graphics/${MODPY_PYCACHE}BasicChromosome.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Graphics/${MODPY_PYCACHE}ColorSpiral.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Graphics/${MODPY_PYCACHE}ColorSpiral.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Graphics/${MODPY_PYCACHE}Comparative.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Graphics/${MODPY_PYCACHE}Comparative.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Graphics/${MODPY_PYCACHE}DisplayRepresentation.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Graphics/${MODPY_PYCACHE}DisplayRepresentation.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Graphics/${MODPY_PYCACHE}Distribution.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Graphics/${MODPY_PYCACHE}Distribution.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Graphics/${MODPY_PYCACHE}KGML_vis.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Graphics/${MODPY_PYCACHE}KGML_vis.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Graphics/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Graphics/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/HMM/
lib/python${MODPY_VERSION}/site-packages/Bio/HMM/DynamicProgramming.py
@ -488,40 +564,54 @@ lib/python${MODPY_VERSION}/site-packages/Bio/HMM/Trainer.py
lib/python${MODPY_VERSION}/site-packages/Bio/HMM/Utilities.py
lib/python${MODPY_VERSION}/site-packages/Bio/HMM/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/HMM/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/HMM/${MODPY_PYCACHE}DynamicProgramming.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/HMM/${MODPY_PYCACHE}DynamicProgramming.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/HMM/${MODPY_PYCACHE}MarkovModel.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/HMM/${MODPY_PYCACHE}MarkovModel.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/HMM/${MODPY_PYCACHE}Trainer.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/HMM/${MODPY_PYCACHE}Trainer.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/HMM/${MODPY_PYCACHE}Utilities.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/HMM/${MODPY_PYCACHE}Utilities.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/HMM/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/HMM/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/KEGG/
lib/python${MODPY_VERSION}/site-packages/Bio/KEGG/Compound/
lib/python${MODPY_VERSION}/site-packages/Bio/KEGG/Compound/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/KEGG/Compound/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/KEGG/Compound/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/KEGG/Compound/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/KEGG/Enzyme/
lib/python${MODPY_VERSION}/site-packages/Bio/KEGG/Enzyme/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/KEGG/Enzyme/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/KEGG/Enzyme/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/KEGG/Enzyme/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/KEGG/Gene/
lib/python${MODPY_VERSION}/site-packages/Bio/KEGG/Gene/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/KEGG/Gene/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/KEGG/Gene/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/KEGG/Gene/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/KEGG/KGML/
lib/python${MODPY_VERSION}/site-packages/Bio/KEGG/KGML/KGML_parser.py
lib/python${MODPY_VERSION}/site-packages/Bio/KEGG/KGML/KGML_pathway.py
lib/python${MODPY_VERSION}/site-packages/Bio/KEGG/KGML/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/KEGG/KGML/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/KEGG/KGML/${MODPY_PYCACHE}KGML_parser.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/KEGG/KGML/${MODPY_PYCACHE}KGML_parser.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/KEGG/KGML/${MODPY_PYCACHE}KGML_pathway.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/KEGG/KGML/${MODPY_PYCACHE}KGML_pathway.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/KEGG/KGML/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/KEGG/KGML/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/KEGG/Map/
lib/python${MODPY_VERSION}/site-packages/Bio/KEGG/Map/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/KEGG/Map/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/KEGG/Map/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/KEGG/Map/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/KEGG/REST.py
lib/python${MODPY_VERSION}/site-packages/Bio/KEGG/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/KEGG/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/KEGG/${MODPY_PYCACHE}REST.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/KEGG/${MODPY_PYCACHE}REST.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/KEGG/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/KEGG/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/LogisticRegression.py
lib/python${MODPY_VERSION}/site-packages/Bio/MarkovModel.py
@ -529,13 +619,17 @@ lib/python${MODPY_VERSION}/site-packages/Bio/MaxEntropy.py
lib/python${MODPY_VERSION}/site-packages/Bio/Medline/
lib/python${MODPY_VERSION}/site-packages/Bio/Medline/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/Medline/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/Medline/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Medline/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/NMR/
lib/python${MODPY_VERSION}/site-packages/Bio/NMR/NOEtools.py
lib/python${MODPY_VERSION}/site-packages/Bio/NMR/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/NMR/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/NMR/${MODPY_PYCACHE}NOEtools.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/NMR/${MODPY_PYCACHE}NOEtools.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/NMR/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/NMR/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/NMR/${MODPY_PYCACHE}xpktools.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/NMR/${MODPY_PYCACHE}xpktools.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/NMR/xpktools.py
lib/python${MODPY_VERSION}/site-packages/Bio/NaiveBayes.py
@ -546,10 +640,15 @@ lib/python${MODPY_VERSION}/site-packages/Bio/Nexus/StandardData.py
lib/python${MODPY_VERSION}/site-packages/Bio/Nexus/Trees.py
lib/python${MODPY_VERSION}/site-packages/Bio/Nexus/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/Nexus/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/Nexus/${MODPY_PYCACHE}Nexus.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Nexus/${MODPY_PYCACHE}Nexus.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Nexus/${MODPY_PYCACHE}Nodes.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Nexus/${MODPY_PYCACHE}Nodes.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Nexus/${MODPY_PYCACHE}StandardData.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Nexus/${MODPY_PYCACHE}StandardData.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Nexus/${MODPY_PYCACHE}Trees.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Nexus/${MODPY_PYCACHE}Trees.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Nexus/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Nexus/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Nexus/cnexus.c
@so lib/python${MODPY_VERSION}/site-packages/Bio/Nexus/cnexus.${MODPY_PYC_MAGIC_TAG}so
@ -577,6 +676,7 @@ lib/python${MODPY_VERSION}/site-packages/Bio/PDB/Polypeptide.py
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/QCPSuperimposer/
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/QCPSuperimposer/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/PDB/QCPSuperimposer/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/QCPSuperimposer/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/QCPSuperimposer/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/QCPSuperimposer/qcprotmodule.c
@so lib/python${MODPY_VERSION}/site-packages/Bio/PDB/QCPSuperimposer/qcprotmodule.${MODPY_PYC_MAGIC_TAG}so
@ -591,41 +691,77 @@ lib/python${MODPY_VERSION}/site-packages/Bio/PDB/StructureBuilder.py
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/Superimposer.py
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}AbstractPropertyMap.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}AbstractPropertyMap.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}Atom.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}Atom.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}Chain.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}Chain.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}DSSP.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}DSSP.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}Dice.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}Dice.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}Entity.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}Entity.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}FragmentMapper.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}FragmentMapper.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}HSExposure.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}HSExposure.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}MMCIF2Dict.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}MMCIF2Dict.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}MMCIFParser.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}MMCIFParser.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}Model.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}Model.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}NACCESS.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}NACCESS.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}NeighborSearch.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}NeighborSearch.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}PDBExceptions.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}PDBExceptions.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}PDBIO.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}PDBIO.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}PDBList.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}PDBList.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}PDBParser.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}PDBParser.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}PICIO.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}PICIO.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}PSEA.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}PSEA.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}Polypeptide.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}Polypeptide.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}Residue.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}Residue.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}ResidueDepth.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}ResidueDepth.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}SASA.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}SASA.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}SCADIO.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}SCADIO.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}Selection.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}Selection.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}Structure.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}Structure.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}StructureAlignment.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}StructureAlignment.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}StructureBuilder.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}StructureBuilder.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}Superimposer.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}Superimposer.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}ic_data.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}ic_data.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}ic_rebuild.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}ic_rebuild.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}internal_coords.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}internal_coords.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}mmcifio.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}mmcifio.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}parse_pdb_header.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}parse_pdb_header.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}vectors.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/${MODPY_PYCACHE}vectors.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/ic_data.py
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/ic_rebuild.py
@ -637,8 +773,11 @@ lib/python${MODPY_VERSION}/site-packages/Bio/PDB/mmtf/
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/mmtf/DefaultParser.py
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/mmtf/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/PDB/mmtf/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/mmtf/${MODPY_PYCACHE}DefaultParser.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/mmtf/${MODPY_PYCACHE}DefaultParser.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/mmtf/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/mmtf/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/mmtf/${MODPY_PYCACHE}mmtfio.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/mmtf/${MODPY_PYCACHE}mmtfio.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/mmtf/mmtfio.py
lib/python${MODPY_VERSION}/site-packages/Bio/PDB/parse_pdb_header.py
@ -649,11 +788,15 @@ lib/python${MODPY_VERSION}/site-packages/Bio/Pathway/Rep/Graph.py
lib/python${MODPY_VERSION}/site-packages/Bio/Pathway/Rep/MultiGraph.py
lib/python${MODPY_VERSION}/site-packages/Bio/Pathway/Rep/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/Pathway/Rep/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/Pathway/Rep/${MODPY_PYCACHE}Graph.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Pathway/Rep/${MODPY_PYCACHE}Graph.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Pathway/Rep/${MODPY_PYCACHE}MultiGraph.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Pathway/Rep/${MODPY_PYCACHE}MultiGraph.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Pathway/Rep/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Pathway/Rep/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Pathway/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/Pathway/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/Pathway/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Pathway/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/Applications/
@ -662,9 +805,13 @@ lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/Applications/_Phyml.py
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/Applications/_Raxml.py
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/Applications/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/Applications/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/Applications/${MODPY_PYCACHE}_Fasttree.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/Applications/${MODPY_PYCACHE}_Fasttree.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/Applications/${MODPY_PYCACHE}_Phyml.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/Applications/${MODPY_PYCACHE}_Phyml.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/Applications/${MODPY_PYCACHE}_Raxml.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/Applications/${MODPY_PYCACHE}_Raxml.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/Applications/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/Applications/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/BaseTree.py
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/CDAO.py
@ -678,14 +825,23 @@ lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/NexusIO.py
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/PAML/
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/PAML/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/PAML/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/PAML/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/PAML/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/PAML/${MODPY_PYCACHE}_paml.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/PAML/${MODPY_PYCACHE}_paml.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/PAML/${MODPY_PYCACHE}_parse_baseml.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/PAML/${MODPY_PYCACHE}_parse_baseml.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/PAML/${MODPY_PYCACHE}_parse_codeml.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/PAML/${MODPY_PYCACHE}_parse_codeml.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/PAML/${MODPY_PYCACHE}_parse_yn00.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/PAML/${MODPY_PYCACHE}_parse_yn00.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/PAML/${MODPY_PYCACHE}baseml.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/PAML/${MODPY_PYCACHE}baseml.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/PAML/${MODPY_PYCACHE}chi2.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/PAML/${MODPY_PYCACHE}chi2.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/PAML/${MODPY_PYCACHE}codeml.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/PAML/${MODPY_PYCACHE}codeml.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/PAML/${MODPY_PYCACHE}yn00.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/PAML/${MODPY_PYCACHE}yn00.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/PAML/_paml.py
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/PAML/_parse_baseml.py
@ -700,21 +856,37 @@ lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/PhyloXMLIO.py
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/TreeConstruction.py
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/${MODPY_PYCACHE}BaseTree.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/${MODPY_PYCACHE}BaseTree.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/${MODPY_PYCACHE}CDAO.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/${MODPY_PYCACHE}CDAO.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/${MODPY_PYCACHE}CDAOIO.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/${MODPY_PYCACHE}CDAOIO.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/${MODPY_PYCACHE}Consensus.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/${MODPY_PYCACHE}Consensus.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/${MODPY_PYCACHE}NeXML.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/${MODPY_PYCACHE}NeXML.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/${MODPY_PYCACHE}NeXMLIO.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/${MODPY_PYCACHE}NeXMLIO.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/${MODPY_PYCACHE}Newick.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/${MODPY_PYCACHE}Newick.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/${MODPY_PYCACHE}NewickIO.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/${MODPY_PYCACHE}NewickIO.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/${MODPY_PYCACHE}NexusIO.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/${MODPY_PYCACHE}NexusIO.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/${MODPY_PYCACHE}PhyloXML.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/${MODPY_PYCACHE}PhyloXML.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/${MODPY_PYCACHE}PhyloXMLIO.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/${MODPY_PYCACHE}PhyloXMLIO.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/${MODPY_PYCACHE}TreeConstruction.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/${MODPY_PYCACHE}TreeConstruction.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/${MODPY_PYCACHE}_cdao_owl.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/${MODPY_PYCACHE}_cdao_owl.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/${MODPY_PYCACHE}_io.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/${MODPY_PYCACHE}_io.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/${MODPY_PYCACHE}_utils.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/${MODPY_PYCACHE}_utils.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/_cdao_owl.py
lib/python${MODPY_VERSION}/site-packages/Bio/Phylo/_io.py
@ -727,13 +899,19 @@ lib/python${MODPY_VERSION}/site-packages/Bio/PopGen/GenePop/FileParser.py
lib/python${MODPY_VERSION}/site-packages/Bio/PopGen/GenePop/LargeFileParser.py
lib/python${MODPY_VERSION}/site-packages/Bio/PopGen/GenePop/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/PopGen/GenePop/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/PopGen/GenePop/${MODPY_PYCACHE}Controller.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/PopGen/GenePop/${MODPY_PYCACHE}Controller.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/PopGen/GenePop/${MODPY_PYCACHE}EasyController.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/PopGen/GenePop/${MODPY_PYCACHE}EasyController.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/PopGen/GenePop/${MODPY_PYCACHE}FileParser.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/PopGen/GenePop/${MODPY_PYCACHE}FileParser.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/PopGen/GenePop/${MODPY_PYCACHE}LargeFileParser.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/PopGen/GenePop/${MODPY_PYCACHE}LargeFileParser.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/PopGen/GenePop/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/PopGen/GenePop/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/PopGen/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/PopGen/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/PopGen/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/PopGen/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Restriction/
lib/python${MODPY_VERSION}/site-packages/Bio/Restriction/PrintFormat.py
@ -741,9 +919,13 @@ lib/python${MODPY_VERSION}/site-packages/Bio/Restriction/Restriction.py
lib/python${MODPY_VERSION}/site-packages/Bio/Restriction/Restriction_Dictionary.py
lib/python${MODPY_VERSION}/site-packages/Bio/Restriction/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/Restriction/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/Restriction/${MODPY_PYCACHE}PrintFormat.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Restriction/${MODPY_PYCACHE}PrintFormat.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Restriction/${MODPY_PYCACHE}Restriction.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Restriction/${MODPY_PYCACHE}Restriction.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Restriction/${MODPY_PYCACHE}Restriction_Dictionary.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Restriction/${MODPY_PYCACHE}Restriction_Dictionary.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Restriction/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Restriction/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SCOP/
lib/python${MODPY_VERSION}/site-packages/Bio/SCOP/Cla.py
@ -754,24 +936,36 @@ lib/python${MODPY_VERSION}/site-packages/Bio/SCOP/Raf.py
lib/python${MODPY_VERSION}/site-packages/Bio/SCOP/Residues.py
lib/python${MODPY_VERSION}/site-packages/Bio/SCOP/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/SCOP/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/SCOP/${MODPY_PYCACHE}Cla.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SCOP/${MODPY_PYCACHE}Cla.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SCOP/${MODPY_PYCACHE}Des.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SCOP/${MODPY_PYCACHE}Des.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SCOP/${MODPY_PYCACHE}Dom.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SCOP/${MODPY_PYCACHE}Dom.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SCOP/${MODPY_PYCACHE}Hie.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SCOP/${MODPY_PYCACHE}Hie.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SCOP/${MODPY_PYCACHE}Raf.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SCOP/${MODPY_PYCACHE}Raf.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SCOP/${MODPY_PYCACHE}Residues.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SCOP/${MODPY_PYCACHE}Residues.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SCOP/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SCOP/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SVDSuperimposer/
lib/python${MODPY_VERSION}/site-packages/Bio/SVDSuperimposer/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/SVDSuperimposer/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/SVDSuperimposer/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SVDSuperimposer/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/BlastIO/
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/BlastIO/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/BlastIO/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/BlastIO/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/BlastIO/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/BlastIO/${MODPY_PYCACHE}blast_tab.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/BlastIO/${MODPY_PYCACHE}blast_tab.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/BlastIO/${MODPY_PYCACHE}blast_text.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/BlastIO/${MODPY_PYCACHE}blast_text.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/BlastIO/${MODPY_PYCACHE}blast_xml.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/BlastIO/${MODPY_PYCACHE}blast_xml.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/BlastIO/blast_tab.py
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/BlastIO/blast_text.py
@ -780,10 +974,15 @@ lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/BlatIO.py
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/ExonerateIO/
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/ExonerateIO/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/ExonerateIO/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/ExonerateIO/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/ExonerateIO/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/ExonerateIO/${MODPY_PYCACHE}_base.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/ExonerateIO/${MODPY_PYCACHE}_base.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/ExonerateIO/${MODPY_PYCACHE}exonerate_cigar.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/ExonerateIO/${MODPY_PYCACHE}exonerate_cigar.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/ExonerateIO/${MODPY_PYCACHE}exonerate_text.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/ExonerateIO/${MODPY_PYCACHE}exonerate_text.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/ExonerateIO/${MODPY_PYCACHE}exonerate_vulgar.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/ExonerateIO/${MODPY_PYCACHE}exonerate_vulgar.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/ExonerateIO/_base.py
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/ExonerateIO/exonerate_cigar.py
@ -793,17 +992,25 @@ lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/FastaIO.py
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/HHsuiteIO/
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/HHsuiteIO/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/HHsuiteIO/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/HHsuiteIO/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/HHsuiteIO/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/HHsuiteIO/${MODPY_PYCACHE}hhsuite2_text.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/HHsuiteIO/${MODPY_PYCACHE}hhsuite2_text.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/HHsuiteIO/hhsuite2_text.py
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/HmmerIO/
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/HmmerIO/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/HmmerIO/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/HmmerIO/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/HmmerIO/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/HmmerIO/${MODPY_PYCACHE}_base.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/HmmerIO/${MODPY_PYCACHE}_base.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/HmmerIO/${MODPY_PYCACHE}hmmer2_text.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/HmmerIO/${MODPY_PYCACHE}hmmer2_text.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/HmmerIO/${MODPY_PYCACHE}hmmer3_domtab.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/HmmerIO/${MODPY_PYCACHE}hmmer3_domtab.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/HmmerIO/${MODPY_PYCACHE}hmmer3_tab.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/HmmerIO/${MODPY_PYCACHE}hmmer3_tab.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/HmmerIO/${MODPY_PYCACHE}hmmer3_text.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/HmmerIO/${MODPY_PYCACHE}hmmer3_text.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/HmmerIO/_base.py
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/HmmerIO/hmmer2_text.py
@ -813,15 +1020,22 @@ lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/HmmerIO/hmmer3_text.py
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/InterproscanIO/
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/InterproscanIO/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/InterproscanIO/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/InterproscanIO/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/InterproscanIO/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/InterproscanIO/${MODPY_PYCACHE}interproscan_xml.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/InterproscanIO/${MODPY_PYCACHE}interproscan_xml.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/InterproscanIO/interproscan_xml.py
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/${MODPY_PYCACHE}BlatIO.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/${MODPY_PYCACHE}BlatIO.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/${MODPY_PYCACHE}FastaIO.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/${MODPY_PYCACHE}FastaIO.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/${MODPY_PYCACHE}_index.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/${MODPY_PYCACHE}_index.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/${MODPY_PYCACHE}_utils.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/${MODPY_PYCACHE}_utils.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/_index.py
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/_legacy/
@ -829,16 +1043,24 @@ lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/_legacy/NCBIStandalone.py
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/_legacy/ParserSupport.py
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/_legacy/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/_legacy/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/_legacy/${MODPY_PYCACHE}NCBIStandalone.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/_legacy/${MODPY_PYCACHE}NCBIStandalone.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/_legacy/${MODPY_PYCACHE}ParserSupport.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/_legacy/${MODPY_PYCACHE}ParserSupport.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/_legacy/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/_legacy/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/_model/
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/_model/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/_model/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/_model/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/_model/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/_model/${MODPY_PYCACHE}_base.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/_model/${MODPY_PYCACHE}_base.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/_model/${MODPY_PYCACHE}hit.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/_model/${MODPY_PYCACHE}hit.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/_model/${MODPY_PYCACHE}hsp.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/_model/${MODPY_PYCACHE}hsp.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/_model/${MODPY_PYCACHE}query.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/_model/${MODPY_PYCACHE}query.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/_model/_base.py
lib/python${MODPY_VERSION}/site-packages/Bio/SearchIO/_model/hit.py
@ -870,27 +1092,49 @@ lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/UniprotIO.py
lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/XdnaIO.py
lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/${MODPY_PYCACHE}AbiIO.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/${MODPY_PYCACHE}AbiIO.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/${MODPY_PYCACHE}AceIO.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/${MODPY_PYCACHE}AceIO.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/${MODPY_PYCACHE}FastaIO.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/${MODPY_PYCACHE}FastaIO.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/${MODPY_PYCACHE}GckIO.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/${MODPY_PYCACHE}GckIO.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/${MODPY_PYCACHE}IgIO.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/${MODPY_PYCACHE}IgIO.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/${MODPY_PYCACHE}InsdcIO.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/${MODPY_PYCACHE}InsdcIO.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/${MODPY_PYCACHE}Interfaces.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/${MODPY_PYCACHE}Interfaces.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/${MODPY_PYCACHE}NibIO.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/${MODPY_PYCACHE}NibIO.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/${MODPY_PYCACHE}PdbIO.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/${MODPY_PYCACHE}PdbIO.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/${MODPY_PYCACHE}PhdIO.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/${MODPY_PYCACHE}PhdIO.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/${MODPY_PYCACHE}PirIO.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/${MODPY_PYCACHE}PirIO.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/${MODPY_PYCACHE}QualityIO.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/${MODPY_PYCACHE}QualityIO.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/${MODPY_PYCACHE}SeqXmlIO.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/${MODPY_PYCACHE}SeqXmlIO.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/${MODPY_PYCACHE}SffIO.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/${MODPY_PYCACHE}SffIO.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/${MODPY_PYCACHE}SnapGeneIO.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/${MODPY_PYCACHE}SnapGeneIO.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/${MODPY_PYCACHE}SwissIO.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/${MODPY_PYCACHE}SwissIO.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/${MODPY_PYCACHE}TabIO.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/${MODPY_PYCACHE}TabIO.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/${MODPY_PYCACHE}TwoBitIO.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/${MODPY_PYCACHE}TwoBitIO.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/${MODPY_PYCACHE}UniprotIO.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/${MODPY_PYCACHE}UniprotIO.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/${MODPY_PYCACHE}XdnaIO.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/${MODPY_PYCACHE}XdnaIO.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/${MODPY_PYCACHE}_index.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/${MODPY_PYCACHE}_index.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/_index.py
lib/python${MODPY_VERSION}/site-packages/Bio/SeqIO/_twoBitIO.c
@ -906,14 +1150,23 @@ lib/python${MODPY_VERSION}/site-packages/Bio/SeqUtils/ProtParam.py
lib/python${MODPY_VERSION}/site-packages/Bio/SeqUtils/ProtParamData.py
lib/python${MODPY_VERSION}/site-packages/Bio/SeqUtils/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/SeqUtils/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/SeqUtils/${MODPY_PYCACHE}CheckSum.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SeqUtils/${MODPY_PYCACHE}CheckSum.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SeqUtils/${MODPY_PYCACHE}CodonUsage.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SeqUtils/${MODPY_PYCACHE}CodonUsage.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SeqUtils/${MODPY_PYCACHE}CodonUsageIndices.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SeqUtils/${MODPY_PYCACHE}CodonUsageIndices.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SeqUtils/${MODPY_PYCACHE}IsoelectricPoint.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SeqUtils/${MODPY_PYCACHE}IsoelectricPoint.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SeqUtils/${MODPY_PYCACHE}MeltingTemp.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SeqUtils/${MODPY_PYCACHE}MeltingTemp.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SeqUtils/${MODPY_PYCACHE}ProtParam.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SeqUtils/${MODPY_PYCACHE}ProtParam.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SeqUtils/${MODPY_PYCACHE}ProtParamData.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SeqUtils/${MODPY_PYCACHE}ProtParamData.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SeqUtils/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SeqUtils/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SeqUtils/${MODPY_PYCACHE}lcc.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SeqUtils/${MODPY_PYCACHE}lcc.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SeqUtils/lcc.py
lib/python${MODPY_VERSION}/site-packages/Bio/Sequencing/
@ -922,77 +1175,113 @@ lib/python${MODPY_VERSION}/site-packages/Bio/Sequencing/Applications/
lib/python${MODPY_VERSION}/site-packages/Bio/Sequencing/Applications/_Novoalign.py
lib/python${MODPY_VERSION}/site-packages/Bio/Sequencing/Applications/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/Sequencing/Applications/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/Sequencing/Applications/${MODPY_PYCACHE}_Novoalign.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Sequencing/Applications/${MODPY_PYCACHE}_Novoalign.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Sequencing/Applications/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Sequencing/Applications/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Sequencing/Applications/${MODPY_PYCACHE}_bwa.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Sequencing/Applications/${MODPY_PYCACHE}_bwa.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Sequencing/Applications/${MODPY_PYCACHE}_samtools.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Sequencing/Applications/${MODPY_PYCACHE}_samtools.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Sequencing/Applications/_bwa.py
lib/python${MODPY_VERSION}/site-packages/Bio/Sequencing/Applications/_samtools.py
lib/python${MODPY_VERSION}/site-packages/Bio/Sequencing/Phd.py
lib/python${MODPY_VERSION}/site-packages/Bio/Sequencing/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/Sequencing/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/Sequencing/${MODPY_PYCACHE}Ace.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Sequencing/${MODPY_PYCACHE}Ace.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Sequencing/${MODPY_PYCACHE}Phd.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Sequencing/${MODPY_PYCACHE}Phd.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Sequencing/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Sequencing/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SubsMat/
lib/python${MODPY_VERSION}/site-packages/Bio/SubsMat/FreqTable.py
lib/python${MODPY_VERSION}/site-packages/Bio/SubsMat/MatrixInfo.py
lib/python${MODPY_VERSION}/site-packages/Bio/SubsMat/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/SubsMat/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/SubsMat/${MODPY_PYCACHE}FreqTable.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SubsMat/${MODPY_PYCACHE}FreqTable.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SubsMat/${MODPY_PYCACHE}MatrixInfo.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SubsMat/${MODPY_PYCACHE}MatrixInfo.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SubsMat/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SubsMat/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SwissProt/
lib/python${MODPY_VERSION}/site-packages/Bio/SwissProt/KeyWList.py
lib/python${MODPY_VERSION}/site-packages/Bio/SwissProt/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/SwissProt/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/SwissProt/${MODPY_PYCACHE}KeyWList.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SwissProt/${MODPY_PYCACHE}KeyWList.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/SwissProt/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/SwissProt/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/TogoWS/
lib/python${MODPY_VERSION}/site-packages/Bio/TogoWS/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/TogoWS/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/TogoWS/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/TogoWS/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/UniGene/
lib/python${MODPY_VERSION}/site-packages/Bio/UniGene/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/UniGene/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/UniGene/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/UniGene/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/UniProt/
lib/python${MODPY_VERSION}/site-packages/Bio/UniProt/GOA.py
lib/python${MODPY_VERSION}/site-packages/Bio/UniProt/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/UniProt/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/UniProt/${MODPY_PYCACHE}GOA.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/UniProt/${MODPY_PYCACHE}GOA.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/UniProt/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/UniProt/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Wise/
lib/python${MODPY_VERSION}/site-packages/Bio/Wise/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/Wise/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/Wise/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Wise/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Wise/${MODPY_PYCACHE}dnal.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Wise/${MODPY_PYCACHE}dnal.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Wise/${MODPY_PYCACHE}psw.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/Wise/${MODPY_PYCACHE}psw.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/Wise/dnal.py
lib/python${MODPY_VERSION}/site-packages/Bio/Wise/psw.py
lib/python${MODPY_VERSION}/site-packages/Bio/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/${MODPY_PYCACHE}File.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/${MODPY_PYCACHE}File.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/${MODPY_PYCACHE}LogisticRegression.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/${MODPY_PYCACHE}LogisticRegression.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/${MODPY_PYCACHE}MarkovModel.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/${MODPY_PYCACHE}MarkovModel.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/${MODPY_PYCACHE}MaxEntropy.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/${MODPY_PYCACHE}MaxEntropy.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/${MODPY_PYCACHE}NaiveBayes.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/${MODPY_PYCACHE}NaiveBayes.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/${MODPY_PYCACHE}Seq.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/${MODPY_PYCACHE}Seq.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/${MODPY_PYCACHE}SeqFeature.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/${MODPY_PYCACHE}SeqFeature.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/${MODPY_PYCACHE}SeqRecord.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/${MODPY_PYCACHE}SeqRecord.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/${MODPY_PYCACHE}_utils.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/${MODPY_PYCACHE}_utils.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/${MODPY_PYCACHE}bgzf.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/${MODPY_PYCACHE}bgzf.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/${MODPY_PYCACHE}kNN.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/${MODPY_PYCACHE}kNN.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/${MODPY_PYCACHE}pairwise2.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/${MODPY_PYCACHE}pairwise2.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/_utils.py
lib/python${MODPY_VERSION}/site-packages/Bio/bgzf.py
lib/python${MODPY_VERSION}/site-packages/Bio/codonalign/
lib/python${MODPY_VERSION}/site-packages/Bio/codonalign/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/codonalign/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/codonalign/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/codonalign/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/codonalign/${MODPY_PYCACHE}chisq.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/codonalign/${MODPY_PYCACHE}chisq.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/codonalign/${MODPY_PYCACHE}codonalignment.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/codonalign/${MODPY_PYCACHE}codonalignment.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/codonalign/${MODPY_PYCACHE}codonseq.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/codonalign/${MODPY_PYCACHE}codonseq.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/codonalign/chisq.py
lib/python${MODPY_VERSION}/site-packages/Bio/codonalign/codonalignment.py
@ -1003,16 +1292,27 @@ lib/python${MODPY_VERSION}/site-packages/Bio/kNN.py
lib/python${MODPY_VERSION}/site-packages/Bio/motifs/
lib/python${MODPY_VERSION}/site-packages/Bio/motifs/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/motifs/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/motifs/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/motifs/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/motifs/${MODPY_PYCACHE}alignace.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/motifs/${MODPY_PYCACHE}alignace.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/motifs/${MODPY_PYCACHE}clusterbuster.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/motifs/${MODPY_PYCACHE}clusterbuster.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/motifs/${MODPY_PYCACHE}mast.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/motifs/${MODPY_PYCACHE}mast.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/motifs/${MODPY_PYCACHE}matrix.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/motifs/${MODPY_PYCACHE}matrix.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/motifs/${MODPY_PYCACHE}meme.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/motifs/${MODPY_PYCACHE}meme.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/motifs/${MODPY_PYCACHE}minimal.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/motifs/${MODPY_PYCACHE}minimal.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/motifs/${MODPY_PYCACHE}pfm.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/motifs/${MODPY_PYCACHE}pfm.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/motifs/${MODPY_PYCACHE}thresholds.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/motifs/${MODPY_PYCACHE}thresholds.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/motifs/${MODPY_PYCACHE}transfac.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/motifs/${MODPY_PYCACHE}transfac.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/motifs/${MODPY_PYCACHE}xms.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/motifs/${MODPY_PYCACHE}xms.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/motifs/_pwm.c
@so lib/python${MODPY_VERSION}/site-packages/Bio/motifs/_pwm.${MODPY_PYC_MAGIC_TAG}so
@ -1020,14 +1320,18 @@ lib/python${MODPY_VERSION}/site-packages/Bio/motifs/alignace.py
lib/python${MODPY_VERSION}/site-packages/Bio/motifs/applications/
lib/python${MODPY_VERSION}/site-packages/Bio/motifs/applications/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/motifs/applications/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/motifs/applications/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/motifs/applications/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/motifs/applications/${MODPY_PYCACHE}_xxmotif.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/motifs/applications/${MODPY_PYCACHE}_xxmotif.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/motifs/applications/_xxmotif.py
lib/python${MODPY_VERSION}/site-packages/Bio/motifs/clusterbuster.py
lib/python${MODPY_VERSION}/site-packages/Bio/motifs/jaspar/
lib/python${MODPY_VERSION}/site-packages/Bio/motifs/jaspar/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/motifs/jaspar/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/motifs/jaspar/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/motifs/jaspar/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/motifs/jaspar/${MODPY_PYCACHE}db.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/motifs/jaspar/${MODPY_PYCACHE}db.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/motifs/jaspar/db.py
lib/python${MODPY_VERSION}/site-packages/Bio/motifs/mast.py
@ -1042,8 +1346,11 @@ lib/python${MODPY_VERSION}/site-packages/Bio/pairwise2.py
lib/python${MODPY_VERSION}/site-packages/Bio/phenotype/
lib/python${MODPY_VERSION}/site-packages/Bio/phenotype/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/Bio/phenotype/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/Bio/phenotype/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/phenotype/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/phenotype/${MODPY_PYCACHE}phen_micro.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/phenotype/${MODPY_PYCACHE}phen_micro.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/phenotype/${MODPY_PYCACHE}pm_fitting.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/Bio/phenotype/${MODPY_PYCACHE}pm_fitting.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/Bio/phenotype/phen_micro.py
lib/python${MODPY_VERSION}/site-packages/Bio/phenotype/pm_fitting.py
@ -1054,17 +1361,22 @@ lib/python${MODPY_VERSION}/site-packages/BioSQL/DBUtils.py
lib/python${MODPY_VERSION}/site-packages/BioSQL/Loader.py
lib/python${MODPY_VERSION}/site-packages/BioSQL/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/BioSQL/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/BioSQL/${MODPY_PYCACHE}BioSeq.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/BioSQL/${MODPY_PYCACHE}BioSeq.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/BioSQL/${MODPY_PYCACHE}BioSeqDatabase.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/BioSQL/${MODPY_PYCACHE}BioSeqDatabase.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/BioSQL/${MODPY_PYCACHE}DBUtils.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/BioSQL/${MODPY_PYCACHE}DBUtils.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/BioSQL/${MODPY_PYCACHE}Loader.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/BioSQL/${MODPY_PYCACHE}Loader.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/BioSQL/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/BioSQL/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/biopython-${MODPY_EGG_VERSION}-py${MODPY_VERSION}.egg-info/
lib/python${MODPY_VERSION}/site-packages/biopython-${MODPY_EGG_VERSION}-py${MODPY_VERSION}.egg-info/PKG-INFO
lib/python${MODPY_VERSION}/site-packages/biopython-${MODPY_EGG_VERSION}-py${MODPY_VERSION}.egg-info/SOURCES.txt
lib/python${MODPY_VERSION}/site-packages/biopython-${MODPY_EGG_VERSION}-py${MODPY_VERSION}.egg-info/dependency_links.txt
lib/python${MODPY_VERSION}/site-packages/biopython-${MODPY_EGG_VERSION}-py${MODPY_VERSION}.egg-info/requires.txt
lib/python${MODPY_VERSION}/site-packages/biopython-${MODPY_EGG_VERSION}-py${MODPY_VERSION}.egg-info/top_level.txt
lib/python${MODPY_VERSION}/site-packages/biopython-${MODPY_EGG_VERSION}.dist-info/
lib/python${MODPY_VERSION}/site-packages/biopython-${MODPY_EGG_VERSION}.dist-info/LICENSE.rst
lib/python${MODPY_VERSION}/site-packages/biopython-${MODPY_EGG_VERSION}.dist-info/METADATA
lib/python${MODPY_VERSION}/site-packages/biopython-${MODPY_EGG_VERSION}.dist-info/RECORD
lib/python${MODPY_VERSION}/site-packages/biopython-${MODPY_EGG_VERSION}.dist-info/WHEEL
lib/python${MODPY_VERSION}/site-packages/biopython-${MODPY_EGG_VERSION}.dist-info/top_level.txt
share/doc/py-biopython/
share/doc/py-biopython/Tutorial.pdf
share/doc/py-biopython/biopdb_faq.pdf

5
converters/py-html2text/Makefile
View File

@ -3,7 +3,7 @@ COMMENT = HTML to markdown-formatted text converter
MODPY_EGG_VERSION = 2020.1.16
DISTNAME = html2text-${MODPY_EGG_VERSION}
PKGNAME = py-${DISTNAME}
REVISION = 1
REVISION = 2
CATEGORIES = converters
HOMEPAGE = http://alir3z4.github.io/html2text/
@ -14,8 +14,7 @@ PERMIT_PACKAGE = Yes
MODULES = lang/python
MODPY_PI = Yes
MODPY_SETUPTOOLS = Yes
MODPY_PYTEST = Yes
MODPY_PEP517 = setuptools
FLAVORS = python3
FLAVOR = python3

22
converters/py-html2text/pkg/PLIST
View File

@ -2,22 +2,30 @@
@pkgpath converters/py-html2text
bin/${MODPY_PY_PREFIX}html2text
lib/python${MODPY_VERSION}/site-packages/html2text/
lib/python${MODPY_VERSION}/site-packages/html2text-${MODPY_EGG_VERSION}-py${MODPY_VERSION}.egg-info/
lib/python${MODPY_VERSION}/site-packages/html2text-${MODPY_EGG_VERSION}-py${MODPY_VERSION}.egg-info/PKG-INFO
lib/python${MODPY_VERSION}/site-packages/html2text-${MODPY_EGG_VERSION}-py${MODPY_VERSION}.egg-info/SOURCES.txt
lib/python${MODPY_VERSION}/site-packages/html2text-${MODPY_EGG_VERSION}-py${MODPY_VERSION}.egg-info/dependency_links.txt
lib/python${MODPY_VERSION}/site-packages/html2text-${MODPY_EGG_VERSION}-py${MODPY_VERSION}.egg-info/entry_points.txt
lib/python${MODPY_VERSION}/site-packages/html2text-${MODPY_EGG_VERSION}-py${MODPY_VERSION}.egg-info/not-zip-safe
lib/python${MODPY_VERSION}/site-packages/html2text-${MODPY_EGG_VERSION}-py${MODPY_VERSION}.egg-info/top_level.txt
lib/python${MODPY_VERSION}/site-packages/html2text-${MODPY_EGG_VERSION}.dist-info/
lib/python${MODPY_VERSION}/site-packages/html2text-${MODPY_EGG_VERSION}.dist-info/AUTHORS.rst
lib/python${MODPY_VERSION}/site-packages/html2text-${MODPY_EGG_VERSION}.dist-info/COPYING
lib/python${MODPY_VERSION}/site-packages/html2text-${MODPY_EGG_VERSION}.dist-info/METADATA
lib/python${MODPY_VERSION}/site-packages/html2text-${MODPY_EGG_VERSION}.dist-info/RECORD
lib/python${MODPY_VERSION}/site-packages/html2text-${MODPY_EGG_VERSION}.dist-info/WHEEL
lib/python${MODPY_VERSION}/site-packages/html2text-${MODPY_EGG_VERSION}.dist-info/entry_points.txt
lib/python${MODPY_VERSION}/site-packages/html2text-${MODPY_EGG_VERSION}.dist-info/top_level.txt
lib/python${MODPY_VERSION}/site-packages/html2text/__init__.py
lib/python${MODPY_VERSION}/site-packages/html2text/__main__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/html2text/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/html2text/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/html2text/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/html2text/${MODPY_PYCACHE}__main__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/html2text/${MODPY_PYCACHE}__main__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/html2text/${MODPY_PYCACHE}cli.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/html2text/${MODPY_PYCACHE}cli.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/html2text/${MODPY_PYCACHE}config.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/html2text/${MODPY_PYCACHE}config.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/html2text/${MODPY_PYCACHE}elements.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/html2text/${MODPY_PYCACHE}elements.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/html2text/${MODPY_PYCACHE}typing.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/html2text/${MODPY_PYCACHE}typing.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/html2text/${MODPY_PYCACHE}utils.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/html2text/${MODPY_PYCACHE}utils.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/html2text/cli.py
lib/python${MODPY_VERSION}/site-packages/html2text/config.py

8
converters/py-num2words/Makefile
View File

@ -1,8 +1,9 @@
COMMENT = convert numbers to words
MODPY_EGG_VERSION = 0.5.11
DISTNAME = num2words-${MODPY_EGG_VERSION}
PKGNAME = py-${DISTNAME}
REVISION = 0
DISTNAME = num2words-${MODPY_EGG_VERSION}
PKGNAME = py-${DISTNAME}
CATEGORIES = converters
@ -17,8 +18,7 @@ FLAVORS = python3
FLAVOR = python3
MODPY_PI = Yes
MODPY_SETUPTOOLS = Yes
MODPY_PYTEST = Yes
MODPY_PEP517 = setuptools
# needs delegator.py
MODPY_PYTEST_ARGS = --ignore tests/test_cli.py

3
converters/py-vdf/Makefile
View File

@ -1,6 +1,7 @@
COMMENT = Library for working with Valve's VDF text format
MODPY_EGG_VERSION = 3.4
REVISION = 0
DISTNAME = vdf-${MODPY_EGG_VERSION}
PKGNAME = py-${DISTNAME}
CATEGORIES = converters
@ -11,7 +12,7 @@ PERMIT_PACKAGE = Yes
MODULES = lang/python
MODPY_PI = Yes
MODPY_SETUPTOOLS = Yes
MODPY_PEP517 = setuptools
FLAVORS = python3
FLAVOR = python3

14
converters/py-vdf/pkg/PLIST
View File

@ -1,12 +1,14 @@
lib/python${MODPY_VERSION}/site-packages/vdf/
lib/python${MODPY_VERSION}/site-packages/vdf-${MODPY_EGG_VERSION}-py${MODPY_VERSION}.egg-info/
lib/python${MODPY_VERSION}/site-packages/vdf-${MODPY_EGG_VERSION}-py${MODPY_VERSION}.egg-info/PKG-INFO
lib/python${MODPY_VERSION}/site-packages/vdf-${MODPY_EGG_VERSION}-py${MODPY_VERSION}.egg-info/SOURCES.txt
lib/python${MODPY_VERSION}/site-packages/vdf-${MODPY_EGG_VERSION}-py${MODPY_VERSION}.egg-info/dependency_links.txt
lib/python${MODPY_VERSION}/site-packages/vdf-${MODPY_EGG_VERSION}-py${MODPY_VERSION}.egg-info/top_level.txt
lib/python${MODPY_VERSION}/site-packages/vdf-${MODPY_EGG_VERSION}-py${MODPY_VERSION}.egg-info/zip-safe
lib/python${MODPY_VERSION}/site-packages/vdf-${MODPY_EGG_VERSION}.dist-info/
lib/python${MODPY_VERSION}/site-packages/vdf-${MODPY_EGG_VERSION}.dist-info/METADATA
lib/python${MODPY_VERSION}/site-packages/vdf-${MODPY_EGG_VERSION}.dist-info/RECORD
lib/python${MODPY_VERSION}/site-packages/vdf-${MODPY_EGG_VERSION}.dist-info/WHEEL
lib/python${MODPY_VERSION}/site-packages/vdf-${MODPY_EGG_VERSION}.dist-info/top_level.txt
lib/python${MODPY_VERSION}/site-packages/vdf-${MODPY_EGG_VERSION}.dist-info/zip-safe
lib/python${MODPY_VERSION}/site-packages/vdf/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/vdf/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/vdf/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/vdf/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/vdf/${MODPY_PYCACHE}vdict.${MODPY_PYC_MAGIC_TAG}${MODPY_PYOEXTENSION}
lib/python${MODPY_VERSION}/site-packages/vdf/${MODPY_PYCACHE}vdict.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/vdf/vdict.py