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openbsd-ports/biology/py-biopython/Makefile

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bump for python dep
2009-03-11 04:07:56 -04:00
# $OpenBSD: Makefile,v 1.14 2009/03/11 08:07:56 espie Exp $
Import of py-biopython-1.24 The Biopython Project is an international association of developers of freely available Python tools for computational molecular biology. It is a distributed collaborative effort to develop Python libraries and applications which address the needs of current and future work in bioinformatics. ok sturm@.
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new-style MODULES, PLIST.
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SHARED_ONLY= Yes
remove surrounding quotes from COMMENT
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COMMENT= Python tools for computational molecular biology
Import of py-biopython-1.24 The Biopython Project is an international association of developers of freely available Python tools for computational molecular biology. It is a distributed collaborative effort to develop Python libraries and applications which address the needs of current and future work in bioinformatics. ok sturm@.
2004-05-07 04:57:15 -04:00
update to 1.44 from Will Maier (new MAINTAINER) ok merdely
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DISTNAME= biopython-1.44
bump for python dep
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PKGNAME= py-${DISTNAME}p1
Import of py-biopython-1.24 The Biopython Project is an international association of developers of freely available Python tools for computational molecular biology. It is a distributed collaborative effort to develop Python libraries and applications which address the needs of current and future work in bioinformatics. ok sturm@.
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CATEGORIES= biology
HOMEPAGE= http://www.biopython.org/
update to 1.44 from Will Maier (new MAINTAINER) ok merdely
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MAINTAINER= Will Maier <willmaier@ml1.net>
Import of py-biopython-1.24 The Biopython Project is an international association of developers of freely available Python tools for computational molecular biology. It is a distributed collaborative effort to develop Python libraries and applications which address the needs of current and future work in bioinformatics. ok sturm@.
2004-05-07 04:57:15 -04:00
# BSD-like
PERMIT_PACKAGE_CDROM= Yes
PERMIT_PACKAGE_FTP= Yes
PERMIT_DISTFILES_CDROM= Yes
PERMIT_DISTFILES_FTP= Yes
master site fixes
2006-07-13 03:43:40 -04:00
MASTER_SITES= ${HOMEPAGE}DIST/
Import of py-biopython-1.24 The Biopython Project is an international association of developers of freely available Python tools for computational molecular biology. It is a distributed collaborative effort to develop Python libraries and applications which address the needs of current and future work in bioinformatics. ok sturm@.
2004-05-07 04:57:15 -04:00
new-style MODULES, PLIST.
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MODULES= lang/python
change dependency to flavored python product ok simon@,mbalmer@
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PY_FLAVOR= python${MODPY_VERSION}
Import of py-biopython-1.24 The Biopython Project is an international association of developers of freely available Python tools for computational molecular biology. It is a distributed collaborative effort to develop Python libraries and applications which address the needs of current and future work in bioinformatics. ok sturm@.
2004-05-07 04:57:15 -04:00
update to 1.44 from Will Maier (new MAINTAINER) ok merdely
2008-01-11 21:00:24 -05:00
WANTLIB+= stdc++
MODPY_EXPAT_DEPENDS doesn't exist any longer. While here, update PLISTs, some WANTLIBs, some license markers and use MODPY_EGG_VERSION where it may help to keep future PLIST diffs smaller. help, nitpicking and ok jasper@, ok wcmaier@ note that print/py-reportlab/reportlab needs some more love.
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BUILD_DEPENDS= ::math/py-Numeric \
update to 1.44 from Will Maier (new MAINTAINER) ok merdely
2008-01-11 21:00:24 -05:00
::devel/swig
MODPY_EXPAT_DEPENDS doesn't exist any longer. While here, update PLISTs, some WANTLIBs, some license markers and use MODPY_EGG_VERSION where it may help to keep future PLIST diffs smaller. help, nitpicking and ok jasper@, ok wcmaier@ note that print/py-reportlab/reportlab needs some more love.
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RUN_DEPENDS= :py-mxDateTime-*-${PY_FLAVOR}:devel/py-mxDateTime,${PY_FLAVOR} \
Update to 1.41
2005-12-03 17:34:52 -05:00
:py-Numeric-*:math/py-Numeric \
:py-reportlab-*:print/py-reportlab/reportlab
Import of py-biopython-1.24 The Biopython Project is an international association of developers of freely available Python tools for computational molecular biology. It is a distributed collaborative effort to develop Python libraries and applications which address the needs of current and future work in bioinformatics. ok sturm@.
2004-05-07 04:57:15 -04:00
REGRESS_DEPENDS=${RUN_DEPENDS}
update to 1.44 from Will Maier (new MAINTAINER) ok merdely
2008-01-11 21:00:24 -05:00
CFLAGS+= -fPIC
- bring ed(1) to the rescue ; it looks like my latest "fix" was too late (I will now hide...) input by and ok pyr@
2007-10-19 04:38:24 -04:00
Import of py-biopython-1.24 The Biopython Project is an international association of developers of freely available Python tools for computational molecular biology. It is a distributed collaborative effort to develop Python libraries and applications which address the needs of current and future work in bioinformatics. ok sturm@.
2004-05-07 04:57:15 -04:00
post-install:
update to 1.44 from Will Maier (new MAINTAINER) ok merdely
2008-01-11 21:00:24 -05:00
${INSTALL_DATA_DIR} ${PREFIX}/share/doc/py-biopython/
${INSTALL_DATA_DIR} ${PREFIX}/share/examples/py-biopython/
${INSTALL_DATA} ${WRKSRC}/Doc/*.txt ${PREFIX}/share/doc/py-biopython/
cd ${WRKSRC}/Doc/examples; tar cf - * | \
tar xf - -C ${PREFIX}/share/examples/py-biopython
Import of py-biopython-1.24 The Biopython Project is an international association of developers of freely available Python tools for computational molecular biology. It is a distributed collaborative effort to develop Python libraries and applications which address the needs of current and future work in bioinformatics. ok sturm@.
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do-regress: fake
update to 1.44 from Will Maier (new MAINTAINER) ok merdely
2008-01-11 21:00:24 -05:00
@cd ${WRKSRC}/Tests && \
Import of py-biopython-1.24 The Biopython Project is an international association of developers of freely available Python tools for computational molecular biology. It is a distributed collaborative effort to develop Python libraries and applications which address the needs of current and future work in bioinformatics. ok sturm@.
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PYTHONPATH=${WRKINST}${MODPY_SITEPKG} \
Update to 1.41
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${MODPY_BIN} ./run_tests.py --no-gui
Import of py-biopython-1.24 The Biopython Project is an international association of developers of freely available Python tools for computational molecular biology. It is a distributed collaborative effort to develop Python libraries and applications which address the needs of current and future work in bioinformatics. ok sturm@.
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.include <bsd.port.mk>
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