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openbsd-ports/biology/py-biopython/Makefile

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convert to new style depends zap default spec that are not needed convert libspecs as well convert p* to REVISION. No package changes
2010-11-14 19:22:45 -05:00
# $OpenBSD: Makefile,v 1.17 2010/11/15 00:22:49 espie Exp $
Import of py-biopython-1.24 The Biopython Project is an international association of developers of freely available Python tools for computational molecular biology. It is a distributed collaborative effort to develop Python libraries and applications which address the needs of current and future work in bioinformatics. ok sturm@.
2004-05-07 04:57:15 -04:00
Update to 1.50, fix email, use MODPY_EGG_VERSION, clean DEPENDS, regen patches.
2009-06-02 00:48:32 -04:00
SHARED_ONLY= Yes
COMMENT= Python tools for computational molecular biology
Import of py-biopython-1.24 The Biopython Project is an international association of developers of freely available Python tools for computational molecular biology. It is a distributed collaborative effort to develop Python libraries and applications which address the needs of current and future work in bioinformatics. ok sturm@.
2004-05-07 04:57:15 -04:00
Update to 1.50, fix email, use MODPY_EGG_VERSION, clean DEPENDS, regen patches.
2009-06-02 00:48:32 -04:00
MODPY_EGG_VERSION= 1.50
DISTNAME= biopython-${MODPY_EGG_VERSION}
Bump revision after python's default change.
2010-08-30 12:48:31 -04:00
REVISION = 0
Update to 1.50, fix email, use MODPY_EGG_VERSION, clean DEPENDS, regen patches.
2009-06-02 00:48:32 -04:00
CATEGORIES= biology
Import of py-biopython-1.24 The Biopython Project is an international association of developers of freely available Python tools for computational molecular biology. It is a distributed collaborative effort to develop Python libraries and applications which address the needs of current and future work in bioinformatics. ok sturm@.
2004-05-07 04:57:15 -04:00
Update to 1.50, fix email, use MODPY_EGG_VERSION, clean DEPENDS, regen patches.
2009-06-02 00:48:32 -04:00
HOMEPAGE= http://www.biopython.org/
Import of py-biopython-1.24 The Biopython Project is an international association of developers of freely available Python tools for computational molecular biology. It is a distributed collaborative effort to develop Python libraries and applications which address the needs of current and future work in bioinformatics. ok sturm@.
2004-05-07 04:57:15 -04:00
Update to 1.50, fix email, use MODPY_EGG_VERSION, clean DEPENDS, regen patches.
2009-06-02 00:48:32 -04:00
MAINTAINER= Will Maier <wcmaier@openbsd.org>
update to 1.44 from Will Maier (new MAINTAINER) ok merdely
2008-01-11 21:00:24 -05:00
Import of py-biopython-1.24 The Biopython Project is an international association of developers of freely available Python tools for computational molecular biology. It is a distributed collaborative effort to develop Python libraries and applications which address the needs of current and future work in bioinformatics. ok sturm@.
2004-05-07 04:57:15 -04:00
# BSD-like
PERMIT_PACKAGE_CDROM= Yes
PERMIT_PACKAGE_FTP= Yes
PERMIT_DISTFILES_CDROM= Yes
PERMIT_DISTFILES_FTP= Yes
master site fixes
2006-07-13 03:43:40 -04:00
MASTER_SITES= ${HOMEPAGE}DIST/
Import of py-biopython-1.24 The Biopython Project is an international association of developers of freely available Python tools for computational molecular biology. It is a distributed collaborative effort to develop Python libraries and applications which address the needs of current and future work in bioinformatics. ok sturm@.
2004-05-07 04:57:15 -04:00
new-style MODULES, PLIST.
2004-08-03 07:18:02 -04:00
MODULES= lang/python
Import of py-biopython-1.24 The Biopython Project is an international association of developers of freely available Python tools for computational molecular biology. It is a distributed collaborative effort to develop Python libraries and applications which address the needs of current and future work in bioinformatics. ok sturm@.
2004-05-07 04:57:15 -04:00
update to 1.44 from Will Maier (new MAINTAINER) ok merdely
2008-01-11 21:00:24 -05:00
WANTLIB+= stdc++
convert to new style depends zap default spec that are not needed convert libspecs as well convert p* to REVISION. No package changes
2010-11-14 19:22:45 -05:00
BUILD_DEPENDS= devel/swig \
math/py-numpy
RUN_DEPENDS= math/py-numpy \
print/py-reportlab/reportlab
Import of py-biopython-1.24 The Biopython Project is an international association of developers of freely available Python tools for computational molecular biology. It is a distributed collaborative effort to develop Python libraries and applications which address the needs of current and future work in bioinformatics. ok sturm@.
2004-05-07 04:57:15 -04:00
REGRESS_DEPENDS=${RUN_DEPENDS}
update to 1.44 from Will Maier (new MAINTAINER) ok merdely
2008-01-11 21:00:24 -05:00
CFLAGS+= -fPIC
- bring ed(1) to the rescue ; it looks like my latest "fix" was too late (I will now hide...) input by and ok pyr@
2007-10-19 04:38:24 -04:00
Import of py-biopython-1.24 The Biopython Project is an international association of developers of freely available Python tools for computational molecular biology. It is a distributed collaborative effort to develop Python libraries and applications which address the needs of current and future work in bioinformatics. ok sturm@.
2004-05-07 04:57:15 -04:00
post-install:
update to 1.44 from Will Maier (new MAINTAINER) ok merdely
2008-01-11 21:00:24 -05:00
${INSTALL_DATA_DIR} ${PREFIX}/share/doc/py-biopython/
${INSTALL_DATA_DIR} ${PREFIX}/share/examples/py-biopython/
${INSTALL_DATA} ${WRKSRC}/Doc/*.txt ${PREFIX}/share/doc/py-biopython/
cd ${WRKSRC}/Doc/examples; tar cf - * | \
tar xf - -C ${PREFIX}/share/examples/py-biopython
Import of py-biopython-1.24 The Biopython Project is an international association of developers of freely available Python tools for computational molecular biology. It is a distributed collaborative effort to develop Python libraries and applications which address the needs of current and future work in bioinformatics. ok sturm@.
2004-05-07 04:57:15 -04:00
do-regress: fake
update to 1.44 from Will Maier (new MAINTAINER) ok merdely
2008-01-11 21:00:24 -05:00
@cd ${WRKSRC}/Tests && \
Import of py-biopython-1.24 The Biopython Project is an international association of developers of freely available Python tools for computational molecular biology. It is a distributed collaborative effort to develop Python libraries and applications which address the needs of current and future work in bioinformatics. ok sturm@.
2004-05-07 04:57:15 -04:00
PYTHONPATH=${WRKINST}${MODPY_SITEPKG} \
Update to 1.50, fix email, use MODPY_EGG_VERSION, clean DEPENDS, regen patches.
2009-06-02 00:48:32 -04:00
${MODPY_BIN} ./run_tests.py
Import of py-biopython-1.24 The Biopython Project is an international association of developers of freely available Python tools for computational molecular biology. It is a distributed collaborative effort to develop Python libraries and applications which address the needs of current and future work in bioinformatics. ok sturm@.
2004-05-07 04:57:15 -04:00
.include <bsd.port.mk>
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