.. |
2d-rewriter
|
|
|
abinit
|
|
|
afni
|
science/afni: update to 20.3.03
|
2020-12-10 14:21:22 +00:00 |
agrum
|
science/agrum: Update 0.18.1 -> 0.18.2
|
2020-11-13 07:14:41 +00:00 |
aircraft-datcom
|
|
|
ALPSCore
|
- Upgrade math/eigen3 to 3.3.8;
|
2020-12-12 17:04:37 +00:00 |
antioch
|
- Upgrade math/eigen3 to 3.3.8;
|
2020-12-12 17:04:37 +00:00 |
apbs
|
|
|
atompaw
|
|
|
avogadro2
|
|
|
avogadrolibs
|
- Upgrade math/eigen3 to 3.3.8;
|
2020-12-12 17:04:37 +00:00 |
axom
|
New port: science/axom: Infrastructure for development of multi-physics applications and tools
|
2020-10-09 03:42:21 +00:00 |
bagel
|
|
|
bddsolve
|
|
|
berkeleygw
|
Mark BROKEN on i386 and GCC 10:
|
2020-11-17 21:37:49 +00:00 |
bodr
|
|
|
buddy
|
|
|
cdcl
|
|
|
cdf
|
|
|
cdk
|
|
|
cdo
|
graphics/proj: Update to 7.2.0
|
2020-11-18 05:27:28 +00:00 |
cgnslib
|
Upgrade to v4.1.2 and add a test target.
|
2020-09-13 09:26:10 +00:00 |
cgribex
|
|
|
checkmol
|
- Bump PORTREVISION. fpc was updated to 3.2.0
|
2020-11-25 03:13:18 +00:00 |
chemical-mime-data
|
Prefer graphics/ligvrsvg2-rust over graphics/librsvg2
|
2020-11-09 17:08:12 +00:00 |
chemps2
|
|
|
chemtool
|
science/chemtool: Update dependency transfig:print/transfig -> fig2dev:print/fig2dev
|
2020-10-18 17:53:03 +00:00 |
chemtool-devel
|
science/chemtool-devel: replace transfig with fig2dev
|
2020-10-18 20:10:56 +00:00 |
chrono
|
- Upgrade math/eigen3 to 3.3.8;
|
2020-12-12 17:04:37 +00:00 |
clhep
|
|
|
clipper
|
|
|
code_saturne
|
Update PyQt5 to 5.15.2, sip to 5.5.0, py-qtbuilder to 1.6.0 and py-qt5-sip to 12.8.1
|
2020-12-15 17:56:00 +00:00 |
colt
|
|
|
conduit
|
science/conduit: Update 0.5.1 -> 0.6.0
|
2020-11-03 19:57:57 +00:00 |
coordgenlibs
|
science/coordgenlibs: Update 1.4.1 -> 1.4.2
|
2020-10-14 08:11:18 +00:00 |
cp2k
|
|
|
cp2k-data
|
|
|
crf++
|
Clean up some things
|
2020-09-24 08:50:25 +00:00 |
dalton
|
science/dalton: Update 2018.2 -> 2020.0
|
2020-11-16 02:14:25 +00:00 |
dcl
|
|
|
devisor
|
|
|
dftbplus
|
Add workaround for new failure with Fortran GCC 10 frontend:
|
2020-11-17 22:28:16 +00:00 |
dkh
|
|
|
dlib-cpp
|
science/dlib-cpp: Build shared library instead of static one.
|
2020-11-03 08:03:19 +00:00 |
dlpoly-classic
|
Mark as BROKEN with GCC 10:
|
2020-11-17 21:34:30 +00:00 |
drawxtl
|
|
|
dvc
|
Fix build post-r547793.
|
2020-09-09 15:24:00 +00:00 |
eccodes
|
Update to 2.19.1
|
2020-11-21 09:18:19 +00:00 |
elk
|
Add workaround for new failure with Fortran GCC 10 frontend:
|
2020-11-17 22:32:32 +00:00 |
elmerfem
|
- Upgrade cad/opencascade to 7.5.0
|
2020-11-14 17:25:20 +00:00 |
epte
|
|
|
erd
|
|
|
ergo
|
|
|
erkale
|
math/armadillo: Update to 10.1.1
|
2020-10-29 22:30:44 +00:00 |
erkale-pseudopotentials
|
|
|
fastcap
|
|
|
fasthenry
|
|
|
fastjet
|
|
|
fisicalab
|
Add education virtual category
|
2020-11-20 07:16:06 +00:00 |
fsom
|
|
|
fvcom
|
|
|
fvcom-mpi
|
|
|
gabedit
|
science/gabedit: Update 2.5.1-061218 -> 2.5.1-300720; Fix build on 13
|
2020-09-20 22:12:22 +00:00 |
gamess-us
|
|
|
gchemutils
|
|
|
gdma
|
|
|
getdp
|
|
|
ghemical
|
|
|
ghmm
|
|
|
gnudatalanguage
|
- Upgrade math/eigen3 to 3.3.8;
|
2020-12-12 17:04:37 +00:00 |
gpaw-setups
|
|
|
gramps
|
Prefer graphics/ligvrsvg2-rust over graphics/librsvg2
|
2020-11-09 17:08:12 +00:00 |
grib_api
|
|
|
gromacs
|
science/gromacs: Turn the option FLOAT to OFF by default
|
2020-12-18 05:40:05 +00:00 |
gsmc
|
|
|
gtamsanalyzer
|
|
|
h5utils
|
|
|
h5z-zfp
|
|
|
harminv
|
|
|
hdf
|
Add workaround for Fortran frontend to GCC 10.
|
2020-11-17 22:21:03 +00:00 |
hdf5
|
|
|
hdf5-18
|
|
|
healpix
|
|
|
hepmc3
|
science/hepmc3: Update 3.2.2 -> 3.2.3
|
2020-12-17 04:23:50 +00:00 |
highfive
|
|
|
hypre
|
science/hypre: Update 2.19.0 -> 2.20.0
|
2020-09-25 19:01:00 +00:00 |
iboview
|
|
|
InsightToolkit
|
- Upgrade math/eigen3 to 3.3.8;
|
2020-12-12 17:04:37 +00:00 |
isaac-cfd
|
|
|
jdftx
|
|
|
jmol
|
science/jmol: Update 14.31.17 -> 14.31.18
|
2020-11-20 00:05:29 +00:00 |
jstrack
|
|
|
kalzium
|
Update KDE Applications to 20.12
|
2020-12-11 19:18:03 +00:00 |
kim-api
|
science/kim-api: Update 2.2.0 -> 2.2.1
|
2020-12-14 05:31:14 +00:00 |
kst2
|
Force to rebuild after math/matio update
|
2020-09-26 16:30:14 +00:00 |
lammps
|
science/lammps: The KIM option isn't broken any more after the latest update of science/kim-api
|
2020-12-14 07:52:51 +00:00 |
lamprop
|
|
|
latte
|
Do not include bsd.port.mk twice
|
2020-12-08 09:30:36 +00:00 |
libaec
|
Use the release tag instead of commit hash
|
2020-10-10 07:44:37 +00:00 |
libccp4
|
Add education virtual category
|
2020-11-20 07:16:06 +00:00 |
libcint
|
science/libcint: Update 4.0.5 -> 4.0.6
|
2020-11-16 03:30:33 +00:00 |
libctl
|
science/libctl: Update to 4.5.0
|
2020-10-31 15:59:08 +00:00 |
libefp
|
|
|
libgeodecomp
|
Modify cad/scotch to support int64.
|
2020-12-09 19:29:19 +00:00 |
libghemical
|
|
|
libgridxc
|
science/libgridxc: Unbreak build by disabling the option that breaks
|
2020-10-13 05:55:28 +00:00 |
libint
|
|
|
libint2
|
|
|
libkml
|
|
|
liblinear
|
Update to 2.42
|
2020-11-08 17:11:37 +00:00 |
libmsym
|
|
|
liboglappth
|
|
|
libquantum
|
|
|
libssm
|
|
|
libsvm
|
|
|
libsvm-python
|
|
|
libvdwxc
|
|
|
libxc
|
|
|
liggghts
|
|
|
luscus
|
science/luscus: Fix build on 13
|
2020-09-21 16:24:03 +00:00 |
madness
|
|
|
maeparser
|
science/maeparser: Update 1.2.3 -> 1.2.4
|
2020-10-14 08:15:26 +00:00 |
massxpert
|
|
|
mbdyn
|
Add workaround for new failure with Fortran GCC 10 frontend:
|
2020-11-17 22:36:02 +00:00 |
mcstas
|
|
|
mcstas-comps
|
|
|
mcxtrace
|
|
|
mcxtrace-comps
|
|
|
mdynamix
|
Add workaround for new failure with Fortran GCC 10 frontend:
|
2020-11-17 22:37:32 +00:00 |
medit
|
|
|
metaphysicl
|
|
|
minc2
|
|
|
mmdb2
|
|
|
mmtf-cpp
|
|
|
mol2ps
|
- Bump PORTREVISION. fpc was updated to 3.2.0
|
2020-11-25 03:13:18 +00:00 |
molgif
|
|
|
molscript
|
|
|
molsketch
|
|
|
mpb
|
science/mpb: Update to 1.11.1
|
2020-10-31 16:00:18 +00:00 |
mpqc
|
|
|
msms
|
|
|
multiwfn
|
|
|
namd
|
|
|
nest
|
science/nest: Update 2.20.0 -> 2.20.1
|
2020-12-06 09:22:22 +00:00 |
netcdf
|
|
|
netcdf-cxx
|
|
|
netcdf-fortran
|
|
|
nifticlib
|
|
|
nwchem
|
science/nwchem: Update 7.0.1 -> 7.0.2
|
2020-10-15 06:41:02 +00:00 |
nwchem-data
|
science/nwchem-data: Update 7.0.1 -> 7.0.2
|
2020-10-14 08:19:21 +00:00 |
octopus
|
Add workaround for new failure with Fortran GCC 10 frontend:
|
2020-11-17 22:39:17 +00:00 |
openbabel
|
- Upgrade math/eigen3 to 3.3.8;
|
2020-12-12 17:04:37 +00:00 |
openkim
|
|
|
openkim-models
|
|
|
opensim-core
|
|
|
opensph
|
- Upgrade math/eigen3 to 3.3.8;
|
2020-12-12 17:04:37 +00:00 |
opsin
|
|
|
p5-Algorithm-SVMLight
|
|
|
p5-Chemistry-3DBuilder
|
|
|
p5-Chemistry-Bond-Find
|
|
|
p5-Chemistry-Canonicalize
|
|
|
p5-Chemistry-Elements
|
|
|
p5-Chemistry-File-MDLMol
|
|
|
p5-Chemistry-File-Mopac
|
|
|
p5-Chemistry-File-PDB
|
|
|
p5-Chemistry-File-SLN
|
|
|
p5-Chemistry-File-SMARTS
|
|
|
p5-Chemistry-File-SMILES
|
|
|
p5-Chemistry-File-VRML
|
|
|
p5-Chemistry-File-XYZ
|
|
|
p5-Chemistry-FormulaPattern
|
|
|
p5-Chemistry-InternalCoords
|
|
|
p5-Chemistry-Isotope
|
|
|
p5-Chemistry-MacroMol
|
|
|
p5-Chemistry-MidasPattern
|
|
|
p5-Chemistry-Mok
|
|
|
p5-Chemistry-Mol
|
|
|
p5-Chemistry-Pattern
|
|
|
p5-Chemistry-Reaction
|
|
|
p5-Chemistry-Ring
|
|
|
p5-Geo-BUFR
|
|
|
p5-Geo-Coordinates-Converter
|
|
|
p5-Geo-Coordinates-Converter-iArea
|
|
|
p5-Geo-WebService-Elevation-USGS
|
|
|
p5-Mcstas-Tools
|
|
|
p5-PerlMol
|
|
|
p5-Physics-Unit
|
|
|
packmol
|
|
|
pagmo2
|
- Upgrade math/eigen3 to 3.3.8;
|
2020-12-12 17:04:37 +00:00 |
paje
|
|
|
pcmsolver
|
science/pcmsolver: Update 1.2.3 -> 1.3.0
|
2020-12-03 10:49:31 +00:00 |
PETSc
|
Rescue PETSc by upgrading to 3.14.1, and thus switch to Python 3.x.
|
2020-12-16 16:19:30 +00:00 |
plumed
|
science/plumed: Update 2.6.1 -> 2.6.2
|
2020-10-28 01:33:14 +00:00 |
pnetcdf
|
|
|
pulseview
|
|
|
py-abipy
|
|
|
py-asdf
|
Move devel/py-semantic_version to devel/py-semantic-version
|
2020-12-05 13:47:27 +00:00 |
py-ase
|
science/py-ase: Update 3.20.0 -> 3.20.1
|
2020-09-05 06:05:19 +00:00 |
py-avogadrolibs
|
- Upgrade math/eigen3 to 3.3.8;
|
2020-12-12 17:04:37 +00:00 |
py-cdo
|
|
|
py-chainer
|
science/py-chainer: Update 7.2.0 -> 7.7.0
|
2020-11-14 17:05:49 +00:00 |
py-chainer-chemistry
|
|
|
py-chempy
|
science/py-chempy: Update 0.7.12 -> 0.8.1
|
2020-12-06 22:32:36 +00:00 |
py-coards
|
|
|
py-DendroPy
|
|
|
py-dlib
|
|
|
py-eccodes
|
Add py-eccodes 1.0.0 (copied from py-eccodes-python)
|
2020-12-19 20:04:12 +00:00 |
py-eccodes-python
|
Update to 0.9.9
|
2020-11-15 18:05:48 +00:00 |
py-geolinks
|
|
|
py-geomet
|
Update to 0.2.1.post1
|
2020-11-15 18:05:52 +00:00 |
py-geometer
|
|
|
py-geometric
|
Unbreak bulk -a
|
2020-09-19 14:15:42 +00:00 |
py-gpaw
|
science/py-gpaw: Update 1.5.2 -> 20.10.0
|
2020-11-14 08:17:55 +00:00 |
py-GPy
|
|
|
py-GPyOpt
|
|
|
py-gsd
|
science/py-gsd: Update 2.3.0 -> 2.4.0
|
2020-11-15 19:36:20 +00:00 |
py-h5json
|
|
|
py-h5py
|
|
|
py-kim-query
|
|
|
py-kinematics
|
Update to 0.1.7
|
2020-11-15 18:05:57 +00:00 |
py-kliff
|
|
|
py-liac-arff
|
Update to 2.5.0
|
2020-09-05 10:10:15 +00:00 |
py-lifelines
|
Unbreak bulk -a
|
2020-09-19 14:15:42 +00:00 |
py-MDAnalysis
|
|
|
py-MDAnalysisTests
|
|
|
py-mdp
|
|
|
py-mmtf-python
|
|
|
py-molmod
|
|
|
py-moltemplate
|
science/py-moltemplate: Update 2.19.0 -> 2.19.1
|
2020-11-05 21:56:15 +00:00 |
py-netCDF4
|
|
|
py-netcdf-flattener
|
Add py-netcdf-flattener 1.2.0
|
2020-12-10 21:28:22 +00:00 |
py-obspy
|
Unbreak bulk -a
|
2020-09-19 14:15:42 +00:00 |
py-oddt
|
|
|
py-OpenFermion
|
Unbreak bulk -a
|
2020-09-19 14:15:42 +00:00 |
py-openpiv
|
science/py-openpiv: update to 0.22.3
|
2020-09-28 21:18:16 +00:00 |
py-paida
|
|
|
py-paramz
|
|
|
py-phono3py
|
Unbreak bulk -a
|
2020-09-19 14:15:42 +00:00 |
py-phonopy
|
science/py-phonopy: Update 2.8.0 -> 2.8.1
|
2020-10-12 04:37:49 +00:00 |
py-pupynere
|
|
|
py-pyaixi
|
Update to 1.0.4.post1
|
2020-11-15 18:06:01 +00:00 |
py-pycsw
|
|
|
py-pydicom
|
- Update to 2.1.2
|
2020-12-12 00:54:58 +00:00 |
py-PyFR
|
|
|
py-pygeodesy
|
Update to 20.10.30
|
2020-11-15 18:06:06 +00:00 |
py-pygeometa
|
|
|
py-pygmo2
|
science/py-pygmo2: Update 2.15.0-121 -> 2.15.0-139
|
2020-09-19 19:55:21 +00:00 |
py-pymatgen
|
|
|
py-pymol
|
|
|
py-pyosf
|
|
|
py-pysal
|
Convert REINPLACE_CMD to patch file
|
2020-12-13 14:43:46 +00:00 |
py-pyteomics
|
Update to 4.4.0
|
2020-11-21 09:20:52 +00:00 |
py-qcelemental
|
science/py-qcelemental: Update 0.16.0 -> 0.17.0
|
2020-10-04 19:57:16 +00:00 |
py-qcengine
|
science/py-qcengine: Update 0.16.0 -> 0.17.0
|
2020-10-04 19:57:59 +00:00 |
py-qspin
|
Add education virtual category
|
2020-11-20 07:16:06 +00:00 |
py-quantities
|
|
|
py-rmf
|
|
|
py-rmsd
|
science/py-rmsd: Update 1.3.2 -> 1.4
|
2020-11-11 06:00:50 +00:00 |
py-ruffus
|
|
|
py-scikit-fuzzy
|
Unbreak bulk -a
|
2020-09-19 14:15:42 +00:00 |
py-scikit-learn
|
|
|
py-scikit-optimize
|
Update to 0.8.1
|
2020-09-06 15:37:09 +00:00 |
py-scikit-sparse
|
|
|
py-scimath
|
Unbreak bulk -a
|
2020-10-20 07:02:56 +00:00 |
py-scipy
|
|
|
py-scoria
|
|
|
py-segyio
|
science/py-segyio: Update 1.9.4 -> 1.9.5
|
2020-12-17 20:36:00 +00:00 |
py-SimpleSpectral
|
|
|
py-spglib
|
|
|
py-tensorflow
|
devel/icu: update to 68.1
|
2020-11-03 00:56:26 +00:00 |
py-veusz
|
Update PyQt5 to 5.15.2, sip to 5.5.0, py-qtbuilder to 1.6.0 and py-qt5-sip to 12.8.1
|
2020-12-15 17:56:00 +00:00 |
pybrain
|
|
|
pynn
|
|
|
qbox
|
science/qbox: Update 1.72.2 -> 1.72.3
|
2020-12-15 06:01:05 +00:00 |
qcl
|
|
|
qiskit-aer
|
devel/libfmt: Update to 7.0.3
|
2020-09-07 21:19:41 +00:00 |
qmcpack
|
science/qmcpack: Update 3.9.2 -> 3.10.0
|
2020-11-13 05:10:06 +00:00 |
quantum-espresso
|
science/quantum-espresso: Update 6.6 -> 6.7.0
|
2020-12-03 20:51:28 +00:00 |
quantum-espresso-pseudopotentials
|
|
|
qwalk
|
|
|
R-cran-AMORE
|
|
|
R-cran-bayesm
|
|
|
R-cran-cmprsk
|
|
|
R-cran-DCluster
|
|
|
R-cran-e1071
|
- Update to 1.7-4
|
2020-10-17 14:19:29 +00:00 |
R-cran-eco
|
|
|
R-cran-Epi
|
- Update to 2.42
|
2020-11-10 11:37:03 +00:00 |
R-cran-epicalc
|
|
|
R-cran-etm
|
- Update to 1.1.1
|
2020-09-09 08:59:47 +00:00 |
R-cran-FAdist
|
|
|
R-cran-fastICA
|
|
|
R-cran-kernlab
|
|
|
R-cran-snow
|
|
|
R-cran-som
|
|
|
R-cran-udunits2
|
|
|
rdkit
|
science/rdkit: Update 2018.09.3 -> 2020.09.3
|
2020-12-13 22:00:58 +00:00 |
rmf
|
|
|
rubygem-ai4r
|
|
|
rubygem-cdo
|
|
|
rubygem-rgeo
|
Update to 2.2.0
|
2020-11-21 09:43:54 +00:00 |
rubygem-rgeo-geojson
|
|
|
rubygem-rgeo-proj4
|
graphics/proj: Update to 7.2.0
|
2020-11-18 05:27:28 +00:00 |
rubygem-rgeo-shapefile
|
Update to 3.0.0
|
2020-09-05 21:35:09 +00:00 |
rubygem-ruby-dcl
|
|
|
rubygem-ruby-netcdf
|
|
|
scidavis
|
Update Qt/PySide2 to 5.15.2 / PyQt to 5.15.1 / SIP to 5.4.0
|
2020-12-08 20:03:07 +00:00 |
segyio
|
science/segyio: Update 1.9.4 -> 1.9.5
|
2020-12-17 20:35:23 +00:00 |
siesta
|
Add workaround for new failure with Fortran GCC 10 frontend:
|
2020-11-17 22:40:45 +00:00 |
sigrok-cli
|
|
|
sigrok-firmware
|
|
|
sigrok-firmware-fx2lafw
|
|
|
sigrok-firmware-utils
|
|
|
silo
|
science/silo: Backport of patches from Debian to support Python 3
|
2020-09-27 11:32:55 +00:00 |
simbody
|
|
|
simgrid
|
science/simgrid: add libunwind to dependencies on powerpc64
|
2020-09-12 19:19:49 +00:00 |
simint
|
|
|
simlib
|
|
|
simsmith
|
|
|
smoldyn
|
science/smoldyn: fix build on GCC architectures
|
2020-11-03 20:46:52 +00:00 |
sparta
|
|
|
spglib
|
|
|
step
|
- Upgrade math/eigen3 to 3.3.8;
|
2020-12-12 17:04:37 +00:00 |
svmlight
|
|
|
szip
|
|
|
teem
|
|
|
tfel
|
Upgrade to 3.4.0
|
2020-12-13 14:48:11 +00:00 |
tfel-edf
|
Add a work-around for gfortran10 (different operand types).
|
2020-12-04 10:44:04 +00:00 |
tinker
|
science/tinker: Update 8.8.1 -> 8.8.3
|
2020-11-10 22:54:52 +00:00 |
udunits
|
|
|
v_sim
|
|
|
vipster
|
devel/libfmt: Update to 7.0.3
|
2020-09-07 21:19:41 +00:00 |
vmd
|
|
|
voro++
|
|
|
votca
|
science/votca: Update 1.6.2 -> 1.6.3
|
2020-12-18 05:40:58 +00:00 |
wannier90
|
|
|
wwplot
|
|
|
wxmacmolplt
|
|
|
xcrysden
|
science/xcrysden: Fix build on 13 by adding -fcommon
|
2020-09-21 00:45:07 +00:00 |
xdrawchem
|
|
|
xfce4-equake-plugin
|
|
|
xtb
|
science/xtb: update to 6.3.3
|
2020-09-20 21:19:02 +00:00 |
yoda
|
science/yoda: Update 1.8.4 -> 1.8.5
|
2020-12-06 20:30:15 +00:00 |
Makefile
|
Add py-eccodes 1.0.0 (copied from py-eccodes-python)
|
2020-12-19 20:04:12 +00:00 |