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- Upgrade math/eigen3 to 3.3.8;

Browse Source 
- Add some dependencies which might be detected by Find_Package but not registered;

- Bump PORTREVISION of consumers.

PR:		250833
Submitted by:	/me
Approved by:	tcberner@ (KDE / maintainer) + exp-run
This commit is contained in:
Thierry Thomas 2020-12-12 17:04:37 +00:00
parent a0e7003a17
commit 0b5864f66c
Notes: svn2git 2021-03-31 03:12:20 +00:00 
svn path=/head/; revision=557839
79 changed files with 265 additions and 110 deletions
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1
astro/kstars/Makefile
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@ -2,6 +2,7 @@
PORTNAME= kstars
DISTVERSION= 3.5.0
PORTREVISION= 1
PORTEPOCH= 1
CATEGORIES= astro kde
MASTER_SITES= KDE/stable/${PORTNAME}

2
audio/csound/Makefile
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@ -3,7 +3,7 @@
PORTNAME= csound
DISTVERSION= 6.14.0
PORTREVISION= 2
PORTREVISION= 3
CATEGORIES= audio lang
PATCH_SITES= https://github.com/csound/csound/commit/

2
audio/guitarix-lv2/Makefile
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@ -2,7 +2,7 @@
PORTNAME= guitarix
DISTVERSION= 0.40.0
PORTREVISION= 1
PORTREVISION= 2
CATEGORIES= audio
MASTER_SITES= SF/${PORTNAME}/${PORTNAME}/
PKGNAMESUFFIX= -lv2

2
biology/cufflinks/Makefile
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@ -3,7 +3,7 @@
PORTNAME= cufflinks
DISTVERSIONPREFIX= v
DISTVERSION= 2.2.1-89
PORTREVISION= 1
PORTREVISION= 2
DISTVERSIONSUFFIX= -gdc3b0cb
CATEGORIES= biology

2
biology/gcta/Makefile
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@ -2,7 +2,7 @@
PORTNAME= gcta
DISTVERSION= 1.26.0
PORTREVISION= 1
PORTREVISION= 2
CATEGORIES= biology
MASTER_SITES= https://cnsgenomics.com/software/gcta/pre_gcta/
DISTNAME= ${PORTNAME}_${PORTVERSION}_src

2
biology/gemma/Makefile
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@ -2,7 +2,7 @@
PORTNAME= gemma
DISTVERSION= 0.98.1
PORTREVISION= 5
PORTREVISION= 6
CATEGORIES= biology
MAINTAINER= jwb@FreeBSD.org

1
biology/iqtree/Makefile
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@ -3,6 +3,7 @@
PORTNAME= iqtree
DISTVERSIONPREFIX= v
DISTVERSION= 2.0.6
PORTREVISION= 1
CATEGORIES= biology
MAINTAINER= jrm@FreeBSD.org

2
cad/PrusaSlicer/Makefile
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@ -3,7 +3,7 @@
PORTNAME= PrusaSlicer
DISTVERSIONPREFIX= version_
DISTVERSION= 2.2.0
PORTREVISION= 7
PORTREVISION= 8
CATEGORIES= cad
MAINTAINER= teodorsigaev@gmail.com

1
cad/freecad/Makefile
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@ -2,6 +2,7 @@
PORTNAME= FreeCAD
DISTVERSION= 0.18.5
PORTREVISION= 1
# use these for bugfixes/snapshots
# DISTVERSION= 0.18-16093 # git rev-list --count
# DISTVERSIONSUFFIX= -g690774c0e

2
cad/ifcopenshell/Makefile
View File

@ -4,7 +4,7 @@ PORTNAME= ifcopenshell
DISTVERSIONPREFIX= v
DISTVERSION= 0.6.0
DISTVERSIONSUFFIX= b0
PORTREVISION= 1
PORTREVISION= 2
CATEGORIES= cad
DISTNAME= ${PORTNAME}-${DISTVERSION}

1
cad/openroad/Makefile
View File

@ -3,6 +3,7 @@
PORTNAME= openroad
DISTVERSIONPREFIX= v
DISTVERSION= 0.9.0-beta-637
PORTREVISION= 1
DISTVERSIONSUFFIX= -gc3706485
CATEGORIES= cad

2
cad/openscad-devel/Makefile
View File

@ -3,7 +3,7 @@
PORTNAME= openscad
PORTVERSION= 2020.01.04
PORTREVISION= 3
PORTREVISION= 4
#PORTREVISION= 1
CATEGORIES= cad
PKGNAMESUFFIX= -devel

2
cad/openscad/Makefile
View File

@ -3,7 +3,7 @@
PORTNAME= openscad
PORTVERSION= 2019.05.10
PORTREVISION= 7
PORTREVISION= 8
#PORTREVISION= 1
CATEGORIES= cad

1
devel/nextpnr/Makefile
View File

@ -2,6 +2,7 @@
PORTNAME= nextpnr
DISTVERSION= g20200804
PORTREVISION= 1
CATEGORIES= devel
MAINTAINER= manu@FreeBSD.org

2
editors/calligra/Makefile
View File

@ -2,7 +2,7 @@
PORTNAME= calligra
DISTVERSION= 3.2.1
PORTREVISION= 9
PORTREVISION= 10
CATEGORIES= editors kde
MASTER_SITES= KDE/stable/${PORTNAME}/${PORTVERSION}
DIST_SUBDIR= KDE/${PORTNAME}

2
games/leela-zero/Makefile
View File

@ -3,7 +3,7 @@
PORTNAME= leela-zero
DISTVERSIONPREFIX= v
DISTVERSION= 0.17
PORTREVISION= 8
PORTREVISION= 9
CATEGORIES= games
MAINTAINER= yuri@FreeBSD.org

2
graphics/colmap/Makefile
View File

@ -2,7 +2,7 @@
PORTNAME= colmap
DISTVERSION= 3.6
PORTREVISION= 1
PORTREVISION= 2
CATEGORIES= graphics
MAINTAINER= jbeich@FreeBSD.org

2
graphics/digikam/Makefile
View File

@ -2,7 +2,7 @@
PORTNAME= digikam
DISTVERSION= 7.1.0
PORTREVISION= 1
PORTREVISION= 2
CATEGORIES= graphics kde
MASTER_SITES= KDE/stable/${PORTNAME}/${PORTVERSION}
DIST_SUBDIR= KDE/digikam/${PORTVERSION}

2
graphics/instant-meshes/Makefile
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@ -3,7 +3,7 @@
PORTNAME= instant-meshes
DISTVERSION= 0.0-42
DISTVERSIONSUFFIX= -g4a083f4
PORTREVISION= 9
PORTREVISION= 10
CATEGORIES= graphics
MAINTAINER= greg@unrelenting.technology

2
graphics/krita/Makefile
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@ -2,7 +2,7 @@
PORTNAME= krita
DISTVERSION= 4.4.1
PORTREVISION= 3
PORTREVISION= 4
CATEGORIES= graphics kde
MASTER_SITES= KDE/stable/${PORTNAME}/${DISTVERSION}
DIST_SUBDIR= KDE/${PORTNAME}

1
graphics/mirtk/Makefile
View File

@ -3,6 +3,7 @@
PORTNAME= mirtk
DISTVERSIONPREFIX= v
DISTVERSION= 2.0.0-122
PORTREVISION= 1
DISTVERSIONSUFFIX= -g38210fa
CATEGORIES= graphics

2
graphics/movit/Makefile
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@ -2,7 +2,7 @@
PORTNAME= movit
PORTVERSION= 1.6.2
PORTREVISION= 2
PORTREVISION= 3
CATEGORIES= graphics
MASTER_SITES= http://${PORTNAME}.sesse.net/

2
graphics/open3d/Makefile
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@ -3,7 +3,7 @@
PORTNAME= Open3D
DISTVERSIONPREFIX= v
DISTVERSION= 0.2
PORTREVISION= 6
PORTREVISION= 7
CATEGORIES= graphics
MAINTAINER= yuri@FreeBSD.org

2
graphics/opencv-core/Makefile
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@ -1,7 +1,7 @@
# Created by: Martin Matuska <mm@FreeBSD.org>
# $FreeBSD$
PORTREVISION= 2
PORTREVISION= 3
PKGNAMESUFFIX= -${OCV_SLAVE}
COMMENT= OpenCV core libraries

2
graphics/opencv-java/Makefile
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@ -1,6 +1,6 @@
# $FreeBSD$
PORTREVISION= 3
PORTREVISION= 4
CATEGORIES= graphics java
PKGNAMESUFFIX= -${OCV_SLAVE}

2
graphics/opencv/Makefile
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@ -3,7 +3,7 @@
PORTNAME= opencv
PORTVERSION= 3.4.1
PORTREVISION= 36
PORTREVISION= 37
CATEGORIES= graphics
MAINTAINER= tcberner@FreeBSD.org

2
graphics/opengv/Makefile
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@ -2,7 +2,7 @@
PORTNAME= opengv
DISTVERSION= g20181024
PORTREVISION= 3
PORTREVISION= 4
CATEGORIES= graphics
MAINTAINER= yuri@FreeBSD.org

2
graphics/pcl-pointclouds/Makefile
View File

@ -3,7 +3,7 @@
PORTNAME= pcl
DISTVERSIONPREFIX= ${PORTNAME}-
DISTVERSION= 1.11.1
PORTREVISION= 1
PORTREVISION= 2
CATEGORIES= graphics math
PKGNAMESUFFIX= -pointclouds

2
graphics/py-open3d-python/Makefile
View File

@ -3,7 +3,7 @@
PORTNAME= open3d-python
DISTVERSIONPREFIX= v
DISTVERSION= 0.2
PORTREVISION= 4
PORTREVISION= 5
CATEGORIES= graphics
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}

2
graphics/py-opencv/Makefile
View File

@ -1,7 +1,7 @@
# Created by: Martin Matuska <mm@FreeBSD.org>
# $FreeBSD$
PORTREVISION= 5
PORTREVISION= 6
CATEGORIES= graphics python
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}

1
graphics/vpaint/Makefile
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@ -3,6 +3,7 @@
PORTNAME= vpaint
PORTVERSION= 1.7
PORTREVISION= 1
DISTVERSIONPREFIX= v
CATEGORIES= graphics

2
graphics/vv/Makefile
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@ -4,7 +4,7 @@ PORTNAME= vv
DISTVERSIONPREFIX= v
DISTVERSION= 1.4.0-383
DISTVERSIONSUFFIX= -g7a783a8b
PORTREVISION= 1
PORTREVISION= 2
CATEGORIES= graphics
MAINTAINER= yuri@FreeBSD.org

1
math/analitza/Makefile
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@ -2,6 +2,7 @@
PORTNAME= analitza
DISTVERSION= ${KDE_APPLICATIONS_VERSION}
PORTREVISION= 1
CATEGORIES= math education kde kde-applications
MAINTAINER= kde@FreeBSD.org

1
math/ceres-solver/Makefile
View File

@ -2,6 +2,7 @@
PORTNAME= ceres-solver
DISTVERSION= 2.0.0
PORTREVISION= 1
CATEGORIES= math
MAINTAINER= jbeich@FreeBSD.org

1
math/cgal/Makefile
View File

@ -3,6 +3,7 @@
PORTNAME= cgal
PORTVERSION= 5.0.2
PORTREVISION= 1
CATEGORIES= math
MASTER_SITES= https://github.com/${PORTNAME:tu}/${PORTNAME}/releases/download/releases/${DISTNAME}/
DISTNAME= ${PORTNAME:tu}-${PORTVERSION}

23
math/eigen3/Makefile
View File

@ -1,11 +1,9 @@
# $FreeBSD$
PORTNAME= eigen
DISTVERSION= 3.3.7
PORTVERSION= 3.3.8
CATEGORIES= math
MASTER_SITES= https://bitbucket.org/${PORTNAME}/${PORTNAME}/get/
DISTNAME= ${PORTVERSION}
DIST_SUBDIR= ${PORTNAME}
MASTER_SITES= https://gitlab.com/libeigen/eigen/-/archive/${PORTVERSION}/
MAINTAINER= kde@FreeBSD.org
COMMENT= Lightweight library for vector and matrix math
@ -15,11 +13,24 @@ LICENSE_COMB= multi
LICENSE_FILE_LGPL21= ${WRKSRC}/COPYING.LGPL
LICENSE_FILE_MPL20= ${WRKSRC}/COPYING.MPL2
CMAKE_ARGS= -DPKGCONFIG_INSTALL_DIR:PATH="${PREFIX}/libdata/pkgconfig"
CMAKE_ARGS= -DPKGCONFIG_INSTALL_DIR:PATH="libdata/pkgconfig"
USES= cmake tar:bzip2
NO_BUILD= yes
NO_ARCH= yes
WRKSRC= ${WRKDIR}/${PORTNAME}-${PORTNAME}-323c052e1731
OPTIONS_DEFINE= FULL
OPTIONS_DEFAULT=FULL
FULL_DESC= Add the support for math dependencies
FULL_CMAKE_ON= -DBLAS_DIR:PATH="${LOCALBASE}"
FULL_USES= blaslapack:openblas gl pkgconfig
FULL_USE= GL=gl glew glut
FULL_LIB_DEPENDS= libcholmod.so:math/suitesparse \
libsuperlu.so:math/superlu \
libadolc.so:math/adol-c \
libfftw3.so:math/fftw3 \
libmpfr.so:math/mpfr \
libgmp.so:math/gmp \
libboost_thread.so:devel/boost-libs
.include <bsd.port.mk>

6
math/eigen3/distinfo
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@ -1,3 +1,3 @@
TIMESTAMP = 1544905503
SHA256 (eigen/3.3.7.tar.bz2) = 9f13cf90dedbe3e52a19f43000d71fdf72e986beb9a5436dddcd61ff9d77a3ce
SIZE (eigen/3.3.7.tar.bz2) = 1665168
TIMESTAMP = 1604406672
SHA256 (eigen-3.3.8.tar.bz2) = 0215c6593c4ee9f1f7f28238c4e8995584ebf3b556e9dbf933d84feb98d5b9ef
SIZE (eigen-3.3.8.tar.bz2) = 1667794

31
math/eigen3/files/patch-Eigen_src_Core_products_Parallelizer.h Normal file
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@ -0,0 +1,31 @@
--- Eigen/src/Core/products/Parallelizer.h.orig 2020-10-05 11:24:15 UTC
+++ Eigen/src/Core/products/Parallelizer.h
@@ -132,8 +132,7 @@ void parallelize_gemm(const Functor& func, Index rows,
ei_declare_aligned_stack_constructed_variable(GemmParallelInfo<Index>,info,threads,0);
- int errorCount = 0;
- #pragma omp parallel num_threads(threads) reduction(+: errorCount)
+ #pragma omp parallel num_threads(threads)
{
Index i = omp_get_thread_num();
// Note that the actual number of threads might be lower than the number of request ones.
@@ -152,14 +151,11 @@ void parallelize_gemm(const Functor& func, Index rows,
info[i].lhs_start = r0;
info[i].lhs_length = actualBlockRows;
- EIGEN_TRY {
- if(transpose) func(c0, actualBlockCols, 0, rows, info);
- else func(0, rows, c0, actualBlockCols, info);
- } EIGEN_CATCH(...) {
- ++errorCount;
- }
+ if(transpose)
+ func(c0, actualBlockCols, 0, rows, info);
+ else
+ func(0, rows, c0, actualBlockCols, info);
}
- if (errorCount) EIGEN_THROW_X(Eigen::eigen_assert_exception());
#endif
}

11
math/eigen3/files/patch-test_CMakeLists.txt Normal file
View File

@ -0,0 +1,11 @@
--- test/CMakeLists.txt.orig 2020-10-05 11:24:15 UTC
+++ test/CMakeLists.txt
@@ -163,7 +163,7 @@ ei_add_test(constructor)
ei_add_test(linearstructure)
ei_add_test(integer_types)
ei_add_test(unalignedcount)
-if(NOT EIGEN_TEST_NO_EXCEPTIONS)
+if(NOT EIGEN_TEST_NO_EXCEPTIONS AND NOT EIGEN_TEST_OPENMP)
ei_add_test(exceptions)
endif()
ei_add_test(redux)

1
math/fcl/Makefile
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@ -3,6 +3,7 @@
PORTNAME= fcl
DISTVERSIONPREFIX= v
DISTVERSION= 0.6.1
PORTREVISION= 1
CATEGORIES= math
MAINTAINER= yuri@FreeBSD.org

1
math/fcl05/Makefile
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@ -2,6 +2,7 @@
PORTNAME= fcl
DISTVERSION= 0.5.0
PORTREVISION= 1
CATEGORIES= math
PKGNAMESUFFIX= 05

2
math/g2o/Makefile
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@ -3,7 +3,7 @@
PORTNAME= g2o
DISTVERSION= 20200410
DISTVERSIONSUFFIX= _git
PORTREVISION= 1
PORTREVISION= 2
CATEGORIES= math
MAINTAINER= yuri@FreeBSD.org

2
math/ignition-math/Makefile
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@ -2,7 +2,7 @@
PORTNAME= ignition-math
DISTVERSION= 6.0.0
PORTREVISION= 3
PORTREVISION= 4
CATEGORIES= math
MASTER_SITES= https://bitbucket.org/${BB_ACCOUNT}/${BB_PROJECT}/get/${BB_COMMIT}.tar.gz?dummy=/

2
math/libmesh/Makefile
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@ -4,7 +4,7 @@
PORTNAME= libmesh
DISTVERSIONPREFIX= v
DISTVERSION= 1.6.0
PORTREVISION= 1
PORTREVISION= 2
CATEGORIES= math
MAINTAINER= yuri@FreeBSD.org

1
math/libsemigroups/Makefile
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@ -3,6 +3,7 @@
PORTNAME= libsemigroups
PORTVERSION= 1.3.4
PORTREVISION= 1
DISTVERSIONPREFIX= v
CATEGORIES= math

1
math/moab/Makefile
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@ -2,6 +2,7 @@
PORTNAME= moab
DISTVERSION= 5.2.1
PORTREVISION= 1
CATEGORIES= math
MASTER_SITES= https://bitbucket.org/${BB_ACCOUNT}/${BB_PROJECT}/get/${BB_COMMIT}.tar.gz?dummy=/

1
math/openturns/Makefile
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@ -3,6 +3,7 @@
PORTNAME= openturns
DISTVERSIONPREFIX= v
DISTVERSION= 1.16
PORTREVISION= 1
CATEGORIES= math
MAINTAINER= yuri@FreeBSD.org

1
math/py-python-fcl/Makefile
View File

@ -2,6 +2,7 @@
PORTNAME= python-fcl
PORTVERSION= 0.0.12
PORTREVISION= 1
CATEGORIES= math python
MASTER_SITES= CHEESESHOP
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}

2
math/scilab/Makefile
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@ -3,7 +3,7 @@
PORTNAME= scilab
PORTVERSION= 6.1.0
PORTREVISION= 3
PORTREVISION= 4
CATEGORIES= math cad java
MASTER_SITES= https://www.scilab.org/download/${PORTVERSION}/
DISTFILES= ${DISTNAME}-src${EXTRACT_SUFX}

2
math/xlife++/Makefile
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@ -2,7 +2,7 @@
PORTNAME= xlife++
DISTVERSION= 2.0.1
PORTREVISION= 5
PORTREVISION= 6
CATEGORIES= math
MASTER_SITES= https://uma.ensta-paristech.fr/soft/XLiFE++/var/files/src/
DISTNAME= xlifepp-sources-v${DISTVERSION}-2018-05-09

1
misc/dartsim/Makefile
View File

@ -3,6 +3,7 @@
PORTNAME= dartsim
DISTVERSIONPREFIX= v
DISTVERSION= 6.9.4
PORTREVISION= 1
CATEGORIES= misc
MAINTAINER= yuri@FreeBSD.org

2
misc/ngraph/Makefile
View File

@ -4,7 +4,7 @@ PORTNAME= ngraph
DISTVERSIONPREFIX= v
DISTVERSION= 0.29.0-rc.0-345
DISTVERSIONSUFFIX= -g58b649aa6
PORTREVISION= 2
PORTREVISION= 3
CATEGORIES= misc # machine-learning
PKGNAMESUFFIX= -machine-learning-library

1
misc/ompl/Makefile
View File

@ -2,6 +2,7 @@
PORTNAME= ompl
DISTVERSION= 1.5.0
PORTREVISION= 1
CATEGORIES= misc comms
MAINTAINER= yuri@FreeBSD.org

1
misc/openmvg/Makefile
View File

@ -3,6 +3,7 @@
PORTNAME= openmvg
DISTVERSIONPREFIX= v
DISTVERSION= 1.6
PORTREVISION= 1
CATEGORIES= misc science
MAINTAINER= yuri@FreeBSD.org

2
misc/visp/Makefile
View File

@ -2,7 +2,7 @@
PORTNAME= visp
DISTVERSION= 3.3.0
PORTREVISION= 3
PORTREVISION= 4
CATEGORIES= misc
MASTER_SITES= http://gforge.inria.fr/frs/download.php/latestfile/475/

2
multimedia/mlt-qt5/Makefile
View File

@ -1,6 +1,6 @@
# $FreeBSD$
PORTREVISION= 0
PORTREVISION= 1
USES= qt:5 xorg
USE_CXXSTD= c++11

2
multimedia/mlt/Makefile
View File

@ -3,7 +3,7 @@
PORTNAME= mlt
DISTVERSIONPREFIX= v
DISTVERSION= 6.22.1
PORTREVISION= 1
PORTREVISION= 2
CATEGORIES?= multimedia
MAINTAINER= kde@FreeBSD.org

2
multimedia/py-mlt/Makefile
View File

@ -1,7 +1,7 @@
# Created by: Charlie Kester <corky1951@comcast.net>
# $FreeBSD$
PORTREVISION= 0
PORTREVISION= 1
CATEGORIES= multimedia python
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}

2
net-mgmt/metronome/Makefile
View File

@ -2,7 +2,7 @@
PORTNAME= metronome
DISTVERSION= 0.9.0
PORTREVISION= 11
PORTREVISION= 12
CATEGORIES= net-mgmt dns
MAINTAINER= krion@FreeBSD.org

2
science/ALPSCore/Makefile
View File

@ -3,7 +3,7 @@
PORTNAME= ALPSCore
DISTVERSIONPREFIX= v
DISTVERSION= 2.2.0
PORTREVISION= 12
PORTREVISION= 13
CATEGORIES= science
MAINTAINER= ports@FreeBSD.org

2
science/InsightToolkit/Makefile
View File

@ -4,7 +4,7 @@
PORTNAME= InsightToolkit
PORTVERSION= 5.0.1
DISTVERSIONPREFIX=v
PORTREVISION= 6
PORTREVISION= 7
CATEGORIES= science biology
MASTER_SITES= https://github.com/InsightSoftwareConsortium/ITK/releases/download/v5.0.1/:data
DISTFILES= InsightData-5.0.1.tar.gz:data

2
science/antioch/Makefile
View File

@ -4,7 +4,7 @@ PORTNAME= antioch
DISTVERSIONPREFIX= v
DISTVERSION= 0.4.0-156
DISTVERSIONSUFFIX= -g90ffa43
PORTREVISION= 8
PORTREVISION= 9
CATEGORIES= science
MAINTAINER= yuri@FreeBSD.org

1
science/avogadrolibs/Makefile
View File

@ -2,6 +2,7 @@
PORTNAME= avogadrolibs
DISTVERSION= 1.93.0
PORTREVISION= 1
CATEGORIES= science
PATCH_SITES= https://github.com/${GH_ACCOUNT}/${PORTNAME}/commit/

2
science/chrono/Makefile
View File

@ -2,7 +2,7 @@
PORTNAME= chrono
DISTVERSION= 5.0.1
PORTREVISION= 2
PORTREVISION= 3
CATEGORIES= science devel
PKGNAMESUFFIX= -physics-simulation-engine

42
science/gnudatalanguage/Makefile
View File

@ -2,9 +2,10 @@
# $FreeBSD$
PORTNAME= gnudatalanguage
PORTVERSION= 0.9.9
PORTVERSION= 1.0.0
PORTREVISION= 1
DISTVERSIONPREFIX= v
PORTREVISION= 16
DISTVERSIONSUFFIX= -rc.3
CATEGORIES= science lang
.if defined(BUILD_PYTHON_MODULE)
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
@ -16,8 +17,10 @@ COMMENT?= GDL, a free IDL compatible incremental compiler
LICENSE= GPLv2
LIB_DEPENDS+= libgeotiff.so:graphics/libgeotiff\
libexpat.so:textproc/expat2 \
libplplot.so:math/plplot \
libtiff.so:graphics/tiff \
libshp.so:devel/shapelib \
libpng.so:graphics/png \
libsz.so:science/szip \
libps.so:print/pslib \
@ -31,36 +34,29 @@ USES= cmake compiler:c++11-lang fortran ncurses pkgconfig readline \
USE_WX= 3.0+
USE_XORG= x11 sm ice xext
# On FreeBSD < 11 libc++ lacks support for sized delete operators.
# GCC dropped the builtin version of these operators in 6+ by
# defaulting to gnu++14. Force c++11 instead.
# For a more detailed discussion see:
# https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=219484
USE_CXXSTD= gnu++11
# Disable ncurses and readline from ports
# Disable ImageMagick (does'nt work with plplot because dynamic drivers
# are enabled by default)
# TODO: add a slave port for mpich
# TODO: create a port for Cmsvlib http://cow.physics.wisc.edu/~craigm/idl/down/cmsvlib.tar.gz
# TODO: create a port for Astron http://idlastro.gsfc.nasa.gov/ftp/astron.tar.gz
# TODO: create a port for TexToIdl http://physics.mnstate.edu/mcraig/textoidl/textoidl-2-1-2.tar
CMAKE_ARGS= -DREADLINEDIR:STRING="/usr" \
-DOPENMP:BOOL=NO \
-DNCURSESDIR:STRING="/usr"
-DNCURSESDIR:STRING="/usr" \
-DPYTHON:BOOL=NO
CPPFLAGS+= ${CFLAGS} -fno-inline -DNPY_NO_DEPRECATED_API -DNPY_1_7_API_VERSION
CXXFLAGS+= -std=gnu++11 -DACCEPT_USE_OF_DEPRECATED_PROJ_API_H=1
LDFLAGS+= -lpthread -L${LOCALBASE}/lib
TEST_TARGET= check
SLAVEDIRS= science/py-gnudatalanguage
# Upstream prefer GraphicsMagick over ImageMackick but ATM it fails
# see https://github.com/gnudatalanguage/gdl/issues/611
# + Python is broken on 1.0.0-rc2 See issue #757
#OPTIONS_DEFINE= EIGEN EXAMPLES FFTW GLPK GRAPHICSMAGICK GRIB HDF5 LIBPROJ4 MPI NETCDF PYTHON UDUNITS
#OPTIONS_DEFAULT=EIGEN FFTW GLPK GRAPHICSMAGICK GRIB HDF5 LIBPROJ4 NETCDF PYTHON UDUNITS
OPTIONS_DEFINE= EIGEN EXAMPLES FFTW GLPK IMAGEMAGICK GRIB HDF5 LIBPROJ4 MPI NETCDF PYTHON UDUNITS
OPTIONS_DEFAULT=EIGEN FFTW GLPK IMAGEMAGICK GRIB HDF5 LIBPROJ4 NETCDF PYTHON UDUNITS
OPTIONS_DEFINE= EIGEN EXAMPLES FFTW GLPK IMAGEMAGICK GRIB HDF5 LIBPROJ4 MPI NETCDF UDUNITS
OPTIONS_DEFAULT=EIGEN FFTW GLPK IMAGEMAGICK GRIB HDF5 LIBPROJ4 NETCDF UDUNITS
EIGEN_DESC= Eigen3 support (boost performance)
EIGEN_USES= eigen:3
@ -102,19 +98,19 @@ LIBPROJ4_CMAKE_ON= -DLIBPROJ4:BOOL=YES
LIBPROJ4_CMAKE_OFF= -DLIBPROJ4:BOOL=NO
MPI_LIB_DEPENDS= libmpich.so:net/mpich
MPI_CMAKE_ON= -DMPICH:BOOL=ON
MPI_CMAKE_OFF= -DMPICH:BOOL=OFF
MPI_CMAKE_ON= -DMPI:BOOL=ON
MPI_CMAKE_OFF= -DMPI:BOOL=OFF -DMPIDIR=/none
NETCDF_LIB_DEPENDS= libnetcdf.so:science/netcdf
NETCDF_CMAKE_ON= -DNETCDF:BOOL=YES -DHDF:BOOL=NO
NETCDF_CMAKE_OFF= -DNETCDF:BOOL=NO
PYTHON_USES= python:2.7
PYTHON_BUILD_DEPENDS= ${PYNUMPY}
PYTHON_RUN_DEPENDS= ${PYNUMPY} \
${PYTHON_PKGNAMEPREFIX}matplotlib2>0:math/py-matplotlib2@${PY_FLAVOR}
PYTHON_CMAKE_ON= -DPYTHON:BOOL=YES -DPYTHONVERSION:STRING="${PYTHON_VER}"
PYTHON_CMAKE_OFF= -DPYTHON:BOOL=NO
#PYTHON_USES= python:3.6+
#PYTHON_BUILD_DEPENDS= ${PYNUMPY}
#PYTHON_RUN_DEPENDS= ${PYNUMPY} \
# ${PYTHON_PKGNAMEPREFIX}matplotlib>0:math/py-matplotlib@${PY_FLAVOR}
#PYTHON_CMAKE_ON= -DPYTHON:BOOL=YES -DPYTHONVERSION:STRING="${PYTHON_VER}"
#PYTHON_CMAKE_OFF= -DPYTHON:BOOL=NO
# QHULL IS NOT NEEDED YET!
#QHULL_DESC= Enable Triangulate and Qhull support

6
science/gnudatalanguage/distinfo
View File

@ -1,3 +1,3 @@
TIMESTAMP = 1543867255
SHA256 (gnudatalanguage-gdl-v0.9.9_GH0.tar.gz) = ad5de3fec095a5c58b46338dcc7367d2565c093794ab1bbcf180bba1a712cf14
SIZE (gnudatalanguage-gdl-v0.9.9_GH0.tar.gz) = 4478934
TIMESTAMP = 1592584083
SHA256 (gnudatalanguage-gdl-v1.0.0-rc.3_GH0.tar.gz) = 0dc5c5a397d46002e763d24dba707f0aa55ba404062b4ba5d4c217af8a7da024
SIZE (gnudatalanguage-gdl-v1.0.0-rc.3_GH0.tar.gz) = 32650313

4
science/gnudatalanguage/files/patch-CMakeLists.txt
View File

@ -1,6 +1,6 @@
--- CMakeLists.txt.orig 2018-12-01 14:19:52 UTC
--- CMakeLists.txt.orig 2020-03-05 09:15:01 UTC
+++ CMakeLists.txt
@@ -1077,7 +1077,7 @@ if(NOT PYTHON_MODULE)
@@ -1104,7 +1104,7 @@ if(NOT PYTHON_MODULE)
endif(NOT PYTHON_MODULE)
install(FILES ${CMAKE_SOURCE_DIR}/AUTHORS ${CMAKE_SOURCE_DIR}/README DESTINATION ${CMAKE_INSTALL_PREFIX}/${GDL_DATA_DIR})

11
science/gnudatalanguage/files/patch-src__gshhs.cpp
View File

@ -1,11 +0,0 @@
--- src/gshhs.cpp.orig 2018-03-28 19:12:21 UTC
+++ src/gshhs.cpp
@@ -235,7 +235,7 @@ else
double ss = h.south * GSHHS_SCL;
double nn = h.north * GSHHS_SCL;
char source = (src == 1) ? 'W' : 'C'; // Either WVS or CIA (WDBII) pedigree
- if ( river ) source = tolower( (int) source ); // Lower case c means river-lake
+ if ( river ) source = std::tolower( (int) source ); // Lower case c means river-lake
int line = (h.area) ? 0 : 1; // Either Polygon (0) or Line (1) (if no area)

4
science/gnudatalanguage/files/patch-src_ssrfpack.c
View File

@ -1,6 +1,6 @@
--- src/ssrfpack.c.orig 2018-12-01 14:19:52 UTC
--- src/ssrfpack.c.orig 2020-03-05 09:15:01 UTC
+++ src/ssrfpack.c
@@ -11,6 +11,10 @@
@@ -15,6 +15,10 @@
# define sincos(x,s,c) (*s = sin(x), *c = cos(x))
#endif

125
science/gnudatalanguage/pkg-plist
View File

@ -1,7 +1,7 @@
bin/gdl
man/man1/gdl.1.gz
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/CMakeLists.txt
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/Makefile.am
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/LIST
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/README
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/Saturn.jpg
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/banner_for_testsuite.pro
@ -22,6 +22,7 @@ man/man1/gdl.1.gz
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/benchmark/benchmark_info_soft.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/benchmark/benchmark_plot_cartouche.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/benchmark/benchmark_svg.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/benchmark/compare_sort_algos.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/benchmark/plot_all_benchmark.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/benchmark/plot_basic_benchmarks.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/benchmark/print_basic_benchmarks.pro
@ -29,7 +30,7 @@ man/man1/gdl.1.gz
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/byte_array.h5
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/check_if_device_is_ok.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/check_save_restore.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/checks
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/cmake_install.cmake
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/cw_bgroup_broken.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/decomposed_return_values.sav
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/delvarrnew.pp.pro
@ -58,10 +59,26 @@ man/man1/gdl.1.gz
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/idl.xdr
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/image_test.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/indgen_sample.sav
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/interactive_tests/test_all_projs.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/interactive_tests/test_axis.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/interactive_tests/test_colors.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/interactive_tests/test_contour.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/interactive_tests/test_cursor.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/interactive_tests/test_deriv.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/interactive_tests/test_dialog_message.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/interactive_tests/test_get_kbrd.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/interactive_tests/test_map.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/interactive_tests/test_plotting_misc.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/interactive_tests/test_rk4.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/interactive_tests/test_surface_basic.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/interactive_tests/test_titles.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/interactive_tests/test_widgets.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/launchtest.c
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/libtest_ce.cpp
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/make_test_delvarrnew.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/nc_test.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/ob_xml_to_struct__define.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/obxml.xml
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/python/test-GDL.py
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/rnewtest.pp.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/rnewtest.pro
@ -73,7 +90,6 @@ man/man1/gdl.1.gz
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_arg_present.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_array_equal.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_array_indices.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_axis.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_base64.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_besel.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_binfmt.pro
@ -155,23 +171,18 @@ man/man1/gdl.1.gz
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_check_math.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_chisqr_cvf.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_clip.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_colors.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_colorsetup.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_common.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_congrid.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_constants.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_container.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_contour.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_convert_coord.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_convol.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_correlate.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_cursor.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_delvarrnew.pp.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_delvarrnew.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_deriv.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_device.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_diag_matrix.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_dialog_message.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_dicom.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_dilate.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_dims_of_arrays.pro
@ -192,6 +203,7 @@ man/man1/gdl.1.gz
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_file_info.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_file_lines.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_file_link.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_file_mkdir.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_file_move.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_file_search.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_file_test.pro
@ -205,11 +217,12 @@ man/man1/gdl.1.gz
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_fx_root.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_fz_roots.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_gammas.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_gaussian_function.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_gc.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_get_kbrd.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_get_lun.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_get_screen_size.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_gh00178.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_gh00716.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_greek_letters.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_grib.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_hash.pro
@ -242,7 +255,6 @@ man/man1/gdl.1.gz
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_make_array.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_make_dll.c
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_make_dll.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_map.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_map2.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_math_function_dim.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_matrix_multiply.pro
@ -252,6 +264,7 @@ man/man1/gdl.1.gz
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_modulo.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_moment.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_mpfit.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_mpi.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_multiroots.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_n_tags.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_nans_in_sort_and_median.pro
@ -276,12 +289,13 @@ man/man1/gdl.1.gz
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_plot_oo.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_plot_ranges.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_plot_usersym.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_plotting_misc.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_plotting_ranges.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_pmulti.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_pmulti_basic.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_point_lun.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_poly2d.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_poly_fit.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_polywarp.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_postscript.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_powell.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_product.pro
@ -292,29 +306,33 @@ man/man1/gdl.1.gz
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_python_module_0.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_python_module_1.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_python_module_2.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_qhull.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_qromb.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_qromo.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_random.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_read_jpeg.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_read_standard_images.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_readf.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_readf_with_crlf.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_reads.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_rebin.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_resolve_routine.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_restore.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_rk4.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_rounding.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_routine_dir.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_routine_filepath.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_routine_name.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_routine_names.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_same_name.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_save.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_save_restore.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_scope_varfetch.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_scope_varname.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_sem.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_simplex.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_size.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_skip_lun.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_smooth.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_sort.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_spawn_unit.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_spher_harm.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_spl_init.pro
@ -325,13 +343,13 @@ man/man1/gdl.1.gz
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_stregex.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_strmatch.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_strsplit.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_struct_assign.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_structures.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_suite.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_surface_basic.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_systime.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_tag_names.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_tic_toc.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_tiff.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_titles.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_total.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_triangulate.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_trisol.pro
@ -349,6 +367,7 @@ man/man1/gdl.1.gz
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_wordexp.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_wordexp_null_string.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_xdr.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_xmlsax.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_zeropoly.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/test_zip.pro
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/tiff/24bit_color.tif
@ -360,6 +379,11 @@ man/man1/gdl.1.gz
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/testsuite/try
%%DATADIR%%/AUTHORS
%%DATADIR%%/README
%%DATADIR%%/lib/CMprocedures/mpcurvefit.pro
%%DATADIR%%/lib/CMprocedures/mpfit.pro
%%DATADIR%%/lib/CMprocedures/mpfit2dpeak.pro
%%DATADIR%%/lib/CMprocedures/mpfitfun.pro
%%DATADIR%%/lib/CMprocedures/mpfitpeak.pro
%%DATADIR%%/lib/appleman.pro
%%DATADIR%%/lib/array_indices.pro
%%DATADIR%%/lib/bilinear.pro
@ -367,6 +391,7 @@ man/man1/gdl.1.gz
%%DATADIR%%/lib/chisqr_cvf.pro
%%DATADIR%%/lib/congrid.pro
%%DATADIR%%/lib/correlate.pro
%%DATADIR%%/lib/curvefit.pro
%%DATADIR%%/lib/cw_bgroup_donotuseyet.pro
%%DATADIR%%/lib/define_msgblk.pro
%%DATADIR%%/lib/define_msgblk_from_file.pro
@ -395,6 +420,7 @@ man/man1/gdl.1.gz
%%DATADIR%%/lib/errplot.pro
%%DATADIR%%/lib/escape_special_char.pro
%%DATADIR%%/lib/factorial.pro
%%DATADIR%%/lib/file_chmod.pro
%%DATADIR%%/lib/file_copy.pro
%%DATADIR%%/lib/file_expand_path.pro
%%DATADIR%%/lib/file_lines.pro
@ -404,12 +430,16 @@ man/man1/gdl.1.gz
%%DATADIR%%/lib/filepath.pro
%%DATADIR%%/lib/findex.pro
%%DATADIR%%/lib/findfile.pro
%%DATADIR%%/lib/gauss2dfit.pro
%%DATADIR%%/lib/gaussfit.pro
%%DATADIR%%/lib/gaussian_function.pro
%%DATADIR%%/lib/gdl_multimin_fdf.pro
%%DATADIR%%/lib/get_login_info.pro
%%DATADIR%%/lib/handle_create.pro
%%DATADIR%%/lib/handle_free.pro
%%DATADIR%%/lib/handle_info.pro
%%DATADIR%%/lib/handle_value.pro
%%DATADIR%%/lib/hanning.pro
%%DATADIR%%/lib/helpform.pro
%%DATADIR%%/lib/hist_2d.pro
%%DATADIR%%/lib/hist_equal.pro
@ -431,7 +461,22 @@ man/man1/gdl.1.gz
%%DATADIR%%/lib/lmgr.pro
%%DATADIR%%/lib/loadct.pro
%%DATADIR%%/lib/make_dll.pro
%%DATADIR%%/lib/map_clip_set.pro
%%DATADIR%%/lib/map/gdl_map_proj_init_common.pro
%%DATADIR%%/lib/map/gdl_set_map_limits.pro
%%DATADIR%%/lib/map/gdlcommon_mapprojections_common.pro
%%DATADIR%%/lib/map/gdldrawshapecompound.pro
%%DATADIR%%/lib/map/gdldrawshapefile.pro
%%DATADIR%%/lib/map/map_adjlon.pro
%%DATADIR%%/lib/map/map_clip_set.pro
%%DATADIR%%/lib/map/map_continents.pro
%%DATADIR%%/lib/map/map_grid.pro
%%DATADIR%%/lib/map/map_horizon.pro
%%DATADIR%%/lib/map/map_image.pro
%%DATADIR%%/lib/map/map_proj_info.pro
%%DATADIR%%/lib/map/map_proj_init.pro
%%DATADIR%%/lib/map/map_set.pro
%%DATADIR%%/lib/map/map_struct_append.pro
%%DATADIR%%/lib/map/merge_structs_mapset.pro
%%DATADIR%%/lib/matrix_multiply.pro
%%DATADIR%%/lib/meanabsdev.pro
%%DATADIR%%/lib/norm.pro
@ -448,6 +493,7 @@ man/man1/gdl.1.gz
%%DATADIR%%/lib/ploterr.pro
%%DATADIR%%/lib/poly.pro
%%DATADIR%%/lib/poly_area.pro
%%DATADIR%%/lib/poly_fit.pro
%%DATADIR%%/lib/polyfillv.pro
%%DATADIR%%/lib/polywarp.pro
%%DATADIR%%/lib/popd.pro
@ -468,6 +514,7 @@ man/man1/gdl.1.gz
%%DATADIR%%/lib/read_ascii.pro
%%DATADIR%%/lib/read_binary.pro
%%DATADIR%%/lib/read_bmp.pro
%%DATADIR%%/lib/read_csv.pro
%%DATADIR%%/lib/read_dicom.pro
%%DATADIR%%/lib/read_gif.pro
%%DATADIR%%/lib/read_image.pro
@ -478,11 +525,11 @@ man/man1/gdl.1.gz
%%DATADIR%%/lib/read_tiff.pro
%%DATADIR%%/lib/read_x11_bitmap.pro
%%DATADIR%%/lib/read_xwd.pro
%%DATADIR%%/lib/real_part.pro
%%DATADIR%%/lib/resolve_all.pro
%%DATADIR%%/lib/rot.pro
%%DATADIR%%/lib/rstrpos.pro
%%DATADIR%%/lib/showfont.pro
%%DATADIR%%/lib/sigma.pro
%%DATADIR%%/lib/skewness.pro
%%DATADIR%%/lib/skip_lun.pro
%%DATADIR%%/lib/standardize.pro
@ -503,14 +550,17 @@ man/man1/gdl.1.gz
%%DATADIR%%/lib/uniq.pro
%%DATADIR%%/lib/utilities/color2color.pro
%%DATADIR%%/lib/utilities/gdl_status.pro
%%DATADIR%%/lib/utilities/grab_on_internet.pro
%%DATADIR%%/lib/utilities/idlneturl__define.pro
%%DATADIR%%/lib/utilities/idlsysmonitorinfo__define.pro
%%DATADIR%%/lib/utilities/md5sum_check.pro
%%DATADIR%%/lib/utilities/path_add.pro
%%DATADIR%%/lib/utilities/path_remove.pro
%%DATADIR%%/lib/utilities/path_sep_add.pro
%%DATADIR%%/lib/utilities/path_show.pro
%%DATADIR%%/lib/utilities/read_ascii_basic.pro
%%DATADIR%%/lib/utilities/routine_name.pro
%%DATADIR%%/lib/utilities/wget_or_curl.pro
%%DATADIR%%/lib/value_locate.pro
%%DATADIR%%/lib/variance.pro
%%DATADIR%%/lib/widget_message.pro
@ -527,3 +577,44 @@ man/man1/gdl.1.gz
%%DATADIR%%/lib/xmanager.pro
%%DATADIR%%/lib/xregistered.pro
%%DATADIR%%/lib/zenity_check.pro
%%DATADIR%%/resource/maps/COPYRIGHTS
%%DATADIR%%/resource/maps/README
%%DATADIR%%/resource/maps/earth.jpg
%%DATADIR%%/resource/maps/high/continents_med.dbf
%%DATADIR%%/resource/maps/high/continents_med.shp
%%DATADIR%%/resource/maps/high/continents_med.shx
%%DATADIR%%/resource/maps/high/ne_10m_admin_0_boundary_lines_land.dbf
%%DATADIR%%/resource/maps/high/ne_10m_admin_0_boundary_lines_land.shp
%%DATADIR%%/resource/maps/high/ne_10m_admin_0_boundary_lines_land.shx
%%DATADIR%%/resource/maps/high/ne_10m_admin_1_states_provinces.dbf
%%DATADIR%%/resource/maps/high/ne_10m_admin_1_states_provinces.shp
%%DATADIR%%/resource/maps/high/ne_10m_admin_1_states_provinces.shx
%%DATADIR%%/resource/maps/high/ne_10m_admin_1_states_provinces_lines.dbf
%%DATADIR%%/resource/maps/high/ne_10m_admin_1_states_provinces_lines.shp
%%DATADIR%%/resource/maps/high/ne_10m_admin_1_states_provinces_lines.shx
%%DATADIR%%/resource/maps/high/ne_10m_lakes.dbf
%%DATADIR%%/resource/maps/high/ne_10m_lakes.shp
%%DATADIR%%/resource/maps/high/ne_10m_lakes.shx
%%DATADIR%%/resource/maps/high/ne_10m_rivers_lake_centerlines.dbf
%%DATADIR%%/resource/maps/high/ne_10m_rivers_lake_centerlines.shp
%%DATADIR%%/resource/maps/high/ne_10m_rivers_lake_centerlines.shx
%%DATADIR%%/resource/maps/low/continents.dbf
%%DATADIR%%/resource/maps/low/continents.shp
%%DATADIR%%/resource/maps/low/continents.shx
%%DATADIR%%/resource/maps/low/ne_110m_admin_0_boundary_lines_land.dbf
%%DATADIR%%/resource/maps/low/ne_110m_admin_0_boundary_lines_land.shp
%%DATADIR%%/resource/maps/low/ne_110m_admin_0_boundary_lines_land.shx
%%DATADIR%%/resource/maps/low/ne_110m_admin_1_states_provinces.dbf
%%DATADIR%%/resource/maps/low/ne_110m_admin_1_states_provinces.shp
%%DATADIR%%/resource/maps/low/ne_110m_admin_1_states_provinces.shx
%%DATADIR%%/resource/maps/low/ne_110m_admin_1_states_provinces_lines.dbf
%%DATADIR%%/resource/maps/low/ne_110m_admin_1_states_provinces_lines.shp
%%DATADIR%%/resource/maps/low/ne_110m_admin_1_states_provinces_lines.shx
%%DATADIR%%/resource/maps/low/ne_110m_lakes.dbf
%%DATADIR%%/resource/maps/low/ne_110m_lakes.shp
%%DATADIR%%/resource/maps/low/ne_110m_lakes.shx
%%DATADIR%%/resource/maps/low/ne_50m_rivers_lake_centerlines.dbf
%%DATADIR%%/resource/maps/low/ne_50m_rivers_lake_centerlines.shp
%%DATADIR%%/resource/maps/low/ne_50m_rivers_lake_centerlines.shx
%%DATADIR%%/resource/maps/projDefinitions.sav
%%DATADIR%%/resource/maps/projections.ods

1
science/lammps/Makefile
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@ -2,6 +2,7 @@
PORTNAME= lammps
PORTVERSION= ${GH_TAGNAME:C/(stable|patch)_([0-9]{1,2})([A-Z][a-z][a-z])([0-9]{4})/\4.\3.\2/S/Jan/01/S/Feb/02/S/Mar/03/S/Apr/04/S/May/05/S/Jun/06/S/Jul/07/S/Aug/08/S/Sep/09/S/Oct/10/S/Nov/11/S/Dec/12/}
PORTREVISION= 1
CATEGORIES= science
MAINTAINER= yuri@FreeBSD.org

2
science/openbabel/Makefile
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@ -3,7 +3,7 @@
PORTNAME= openbabel
PORTVERSION= 2.4.1
PORTREVISION= 5
PORTREVISION= 6
CATEGORIES= science
MASTER_SITES= SF

2
science/opensph/Makefile
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@ -3,7 +3,7 @@
PORTNAME= OpenSPH
DISTVERSIONPREFIX= v
DISTVERSION= g20190519
PORTREVISION= 2
PORTREVISION= 3
CATEGORIES= science
MAINTAINER= yuri@FreeBSD.org

1
science/pagmo2/Makefile
View File

@ -3,6 +3,7 @@
PORTNAME= pagmo2
DISTVERSIONPREFIX= v
DISTVERSION= 2.15.0-102
PORTREVISION= 1
DISTVERSIONSUFFIX= -gdecda188
CATEGORIES= science

1
science/py-avogadrolibs/Makefile
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@ -2,6 +2,7 @@
PORTNAME= avogadrolibs
DISTVERSION= 1.93.0
PORTREVISION= 1
CATEGORIES= science
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}

2
science/rdkit/Makefile
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@ -3,7 +3,7 @@
PORTNAME= rdkit
DISTVERSIONPREFIX= Release_
DISTVERSION= 2018_09_3
PORTREVISION= 6
PORTREVISION= 7
CATEGORIES= science
MAINTAINER= yuri@FreeBSD.org

1
science/step/Makefile
View File

@ -2,6 +2,7 @@
PORTNAME= step
DISTVERSION= ${KDE_APPLICATIONS_VERSION}
PORTREVISION= 1
CATEGORIES= science education kde kde-applications
MAINTAINER= kde@FreeBSD.org

1
science/votca/Makefile
View File

@ -3,6 +3,7 @@
PORTNAME= votca
DISTVERSIONPREFIX= v
DISTVERSION= 1.6.2
PORTREVISION= 1
CATEGORIES= science
MAINTAINER= yuri@FreeBSD.org

1
x11-toolkits/nanogui/Makefile
View File

@ -2,6 +2,7 @@
PORTNAME= nanogui
DISTVERSION= g20190922
PORTREVISION= 1
CATEGORIES= x11-toolkits
MAINTAINER= yuri@FreeBSD.org