freebsd-ports/biology
Maho Nakata 10e9ee4f10 Backout previous change of PICFLAG, since
behaviour of -fPIC and -fpic are different.
Here is the comment form obrien:

--
"-fpic" is a [minor?] optimization for machines that can handle it:

  -fpic
    Generate position-independent code (PIC) suitable for use in a shared
    library, if supported for the target machine. Such code accesses all
    constant addresses through a global offset table (GOT). The dynamic
    loader resolves the GOT entries when the program starts (the dynamic
    loader is not part of GCC; it is part of the operating system). If
    the GOT size for the linked executable exceeds a machine-specific
    maximum size, you get an error message from the linker indicating
    that -fpic does not work; in that case, recompile with -fPIC instead.
    (These maximums are 16k on the m88k, 8k on the SPARC, and 32k on the
    m68k and RS/6000. The 386 has no such limit.)

  -fPIC
    If supported for the target machine, emit position-independent code,
    suitable for dynamic linking and avoiding any limit on the size of
    the global offset table. This option makes a difference on the m68k,
    m88k, and the SPARC.

Thanks to: obrien
2004-03-19 04:20:12 +00:00
..
act Bump PORTREVISION on all ports that depend on gettext to aid with upgrading. 2004-02-04 05:21:48 +00:00
artemis Bump PORTREVISION on all ports that depend on gettext to aid with upgrading. 2004-02-04 05:21:48 +00:00
avida SIZEify. 2004-03-17 18:29:46 +00:00
babel - Fix build on AMD64 2004-02-01 22:02:22 +00:00
biojava Add SIZE. 2004-01-27 20:51:07 +00:00
chemeq Bump PORTREVISION on all ports that depend on gettext to aid with upgrading. 2004-02-04 05:21:48 +00:00
clustalw
coalesce
crimap
deft
distribfold Update to 20040226 release 2004-02-27 00:01:02 +00:00
dna-qc BROKEN on alpha 5.x: does not compile 2004-02-23 03:54:36 +00:00
emboss Bump PORTREVISION on all ports that depend on gettext to aid with upgrading. 2004-02-04 05:21:48 +00:00
fasta
fasta3 BROKEN: Checksum mismatch 2004-02-21 19:31:10 +00:00
fastdnaml Bump PORTREVISION on all ports that depend on gettext to aid with upgrading. 2004-02-04 05:21:48 +00:00
flip Correct whitespace in COMMENT 2004-02-07 03:34:43 +00:00
fluctuate
garlic 1) Silent version up without changing the version number 2004-03-18 04:57:07 +00:00
genpak Bump PORTREVISION on all ports that depend on gettext to aid with upgrading. 2004-02-04 05:21:48 +00:00
gff2ps
gperiodic Bump PORTREVISION on all ports that depend on gettext to aid with upgrading. 2004-02-04 05:21:48 +00:00
grappa Bump PORTREVISION on all ports that depend on gettext to aid with upgrading. 2004-02-04 05:21:48 +00:00
hmmer
kinemage Use PLIST_FILES (bento-tested, marcus-reviewed). 2004-02-06 13:12:53 +00:00
L-Breeder Use PLIST_FILES (bento-tested, marcus-reviewed). 2004-02-06 13:12:53 +00:00
lamarc
libgenome Whoa there, boy, that's a mighty big commit y'all have there... 2004-03-14 06:17:56 +00:00
lsysexp Bump PORTREVISION on all ports that depend on gettext to aid with upgrading. 2004-02-04 05:21:48 +00:00
migrate BROKEN on alpha: Does not compile 2004-02-23 03:59:05 +00:00
molden
mopac Bump PORTREVISION on all ports that depend on gettext to aid with upgrading. 2004-02-04 05:21:48 +00:00
nab Add size data. 2004-03-18 02:52:47 +00:00
ncbi-toolkit
nclever
ortep3
p5-AcePerl BROKEN on amd64 and ia64: Does not compile (missing -fPIC) 2004-03-07 13:00:02 +00:00
p5-bioperl Add size data, approved by maintainers. 2004-03-18 18:01:13 +00:00
paml
phylip - Update to 3.6.b 2004-01-31 16:06:24 +00:00
pkg
platon
povchem Insert "-l" into PATCH_ARGS, to cause the "patch" command to ignore 2004-03-09 00:17:05 +00:00
primer3 - Fix MASTER_SITES 2004-02-27 22:20:43 +00:00
psi88 BROKEN: Does not fetch 2004-02-21 21:48:55 +00:00
py-biopython Upgrade to 1.23. 2004-02-09 21:40:47 +00:00
pymol Backout previous change of PICFLAG, since 2004-03-19 04:20:12 +00:00
rasmol Add SIZE. 2004-01-27 20:51:07 +00:00
recombine
ruby-bio
seaview - Update to version 2003.11.25 2004-01-29 10:09:29 +00:00
seqio
sim4 - Update to version 2003.09.21 2004-03-12 13:53:23 +00:00
spdbv
t_coffee
tinker
treepuzzle Use PLIST_FILES (bento-tested, marcus-reviewed). 2004-02-06 13:12:53 +00:00
treeviewx - Update to version 0.4 2004-02-28 09:56:06 +00:00
tRNAscan-SE
wise
xdrawchem SIZEify. 2004-03-17 18:29:46 +00:00
xmolwt Bump PORTREVISION on all ports that depend on gettext to aid with upgrading. 2004-02-04 05:21:48 +00:00
Makefile