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freebsd-ports/biology
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Ade Lovett 3f651573ad Whoa there, boy, that's a mighty big commit y'all have there... 
Begin autotools sanitization sequence by requiring ports to explicitly
specify which version of {libtool,autoconf,automake} they need, erasing
the concept of a "system default".

For ports-in-waiting:

	USE_LIBTOOL=YES		->	USE_LIBTOOL_VER=13
	USE_AUTOCONF=YES	->	USE_AUTOCONF_VER=213
	USE_AUTOMAKE=YES	->	USE_AUTOMAKE_VER=14

Ports attempting to use the old style system after June 1st 2004 will be
sorely disappointed.
2004-03-14 06:17:56 +00:00
..
act Bump PORTREVISION on all ports that depend on gettext to aid with upgrading. 2004-02-04 05:21:48 +00:00
artemis Bump PORTREVISION on all ports that depend on gettext to aid with upgrading. 2004-02-04 05:21:48 +00:00
avida Maintainer reports being unable to look after this port any longer. 2004-03-07 00:18:27 +00:00
babel - Fix build on AMD64 2004-02-01 22:02:22 +00:00
biojava Add SIZE. 2004-01-27 20:51:07 +00:00
chemeq Bump PORTREVISION on all ports that depend on gettext to aid with upgrading. 2004-02-04 05:21:48 +00:00
clustalw
coalesce
crimap
deft
distribfold Update to 20040226 release 2004-02-27 00:01:02 +00:00
dna-qc BROKEN on alpha 5.x: does not compile 2004-02-23 03:54:36 +00:00
emboss Bump PORTREVISION on all ports that depend on gettext to aid with upgrading. 2004-02-04 05:21:48 +00:00
fasta
fasta3 BROKEN: Checksum mismatch 2004-02-21 19:31:10 +00:00
fastdnaml Bump PORTREVISION on all ports that depend on gettext to aid with upgrading. 2004-02-04 05:21:48 +00:00
flip Correct whitespace in COMMENT 2004-02-07 03:34:43 +00:00
fluctuate
garlic BROKEN: Checksum mismatch 2004-02-22 00:43:16 +00:00
genpak Bump PORTREVISION on all ports that depend on gettext to aid with upgrading. 2004-02-04 05:21:48 +00:00
gff2ps
gperiodic Bump PORTREVISION on all ports that depend on gettext to aid with upgrading. 2004-02-04 05:21:48 +00:00
grappa Bump PORTREVISION on all ports that depend on gettext to aid with upgrading. 2004-02-04 05:21:48 +00:00
hmmer
kinemage Use PLIST_FILES (bento-tested, marcus-reviewed). 2004-02-06 13:12:53 +00:00
L-Breeder Use PLIST_FILES (bento-tested, marcus-reviewed). 2004-02-06 13:12:53 +00:00
lamarc
libgenome Whoa there, boy, that's a mighty big commit y'all have there... 2004-03-14 06:17:56 +00:00
lsysexp Bump PORTREVISION on all ports that depend on gettext to aid with upgrading. 2004-02-04 05:21:48 +00:00
migrate BROKEN on alpha: Does not compile 2004-02-23 03:59:05 +00:00
molden
mopac Bump PORTREVISION on all ports that depend on gettext to aid with upgrading. 2004-02-04 05:21:48 +00:00
nab
ncbi-toolkit
nclever
ortep3
p5-AcePerl BROKEN on amd64 and ia64: Does not compile (missing -fPIC) 2004-03-07 13:00:02 +00:00
p5-bioperl Unmark as broken for 4.x; instead, mark as ignore for perl < 5.6. 2004-03-08 03:29:16 +00:00
paml
phylip - Update to 3.6.b 2004-01-31 16:06:24 +00:00
pkg
platon
povchem Insert "-l" into PATCH_ARGS, to cause the "patch" command to ignore 2004-03-09 00:17:05 +00:00
primer3 - Fix MASTER_SITES 2004-02-27 22:20:43 +00:00
psi88 BROKEN: Does not fetch 2004-02-21 21:48:55 +00:00
py-biopython Upgrade to 1.23. 2004-02-09 21:40:47 +00:00
pymol Bump PORTREVISION on all ports that depend on gettext to aid with upgrading. 2004-02-04 05:21:48 +00:00
rasmol Add SIZE. 2004-01-27 20:51:07 +00:00
recombine
ruby-bio
seaview - Update to version 2003.11.25 2004-01-29 10:09:29 +00:00
seqio
sim4 - Update to version 2003.09.21 2004-03-12 13:53:23 +00:00
spdbv
t_coffee Use the CPIO macro defined in bsd.port.mk. 2004-01-22 12:18:43 +00:00
tinker
treepuzzle Use PLIST_FILES (bento-tested, marcus-reviewed). 2004-02-06 13:12:53 +00:00
treeviewx - Update to version 0.4 2004-02-28 09:56:06 +00:00
tRNAscan-SE
wise
xdrawchem Bump PORTREVISION on all ports that depend on gettext to aid with upgrading. 2004-02-04 05:21:48 +00:00
xmolwt Bump PORTREVISION on all ports that depend on gettext to aid with upgrading. 2004-02-04 05:21:48 +00:00
Makefile