freebsd-ports/science
Antoine Brodin f0e7a56e4c MFH: r521744
Fix build with hdf5 1.10.6
2020-01-01 20:24:02 +00:00
..
2d-rewriter
abinit
afni
agrum science/agrum: fix build on powerpc64 elfv2 2019-12-22 18:08:07 +00:00
aircraft-datcom
ALPSCore
antioch
apbs
atom
atompaw
avogadro2
avogadrolibs
bagel
bddsolve
berkeleygw
bodr
brian
buddy
cdcl
cdf
cdo Update jasper to 2.0.16 2019-12-27 13:43:00 +00:00
cgnslib
cgribex Update jasper to 2.0.16 2019-12-27 13:43:00 +00:00
checkmol - Change LDPATH to FPC_LDPATH into lang/fpc/Makefile. It can be changed from 2019-12-31 15:11:18 +00:00
chemical-mime-data
chemps2
chemtool
chemtool-devel
chrono Undeprecate math/blaze and science/chrono per https://lists.freebsd.org/pipermail/svn-ports-head/2019-May/210482.html 2020-01-01 11:30:49 +00:00
clhep
clipper
code_saturne
colt
coordgenlibs
coot
cp2k
cp2k-data
crf++
dalton
datawarrior
dcl
devisor
dftbplus
dkh
dlib-cpp
dlpoly-classic
drawxtl
dvc
eccodes Update to 2.15.0 2019-12-30 16:57:07 +00:00
elk
epte
erd
erkale
erkale-pseudopotentials
esys-particle Mark science/esys-particle as BROKEN (not just on 13) 2019-12-30 14:15:34 +00:00
fastcap
fasthenry
fisicalab
fleur
fsom
fvcom
fvcom-mpi
gabedit
gamess-us
gchemutils Update to 0.10.46 and only keep one libgoffice version 2019-12-16 17:06:38 +00:00
gdma
getdp - Update to 3.3.0. 2019-12-22 02:28:57 +00:00
ghemical
ghmm
gnudatalanguage
gpaw-setups
gramps
grib_api
gromacs science/gromacs: Update 2019.4 -> 2019.5 2019-12-24 07:45:13 +00:00
gsmc
gtamsanalyzer
gwyddion Deprecate a few ports 2019-12-26 07:54:28 +00:00
h5utils
h5z-zfp
harminv
hdf
hdf5 Update to 1.10.6 2019-12-30 16:57:12 +00:00
hdf5-18
healpix
highfive
hypre
iboview
InsightToolkit
isaac-cfd
jdftx
jmol
jstrack
kalzium
kim-api
kst2
lammps
lamprop
latte
libaec
libccp4
libcint
libctl
libefp
libgeodecomp
libghemical
libgridxc
libint
libint2
libkml
liblinear
libmsym
liboglappth
libquantum
libssm
libsvm
libsvm-python
libvdwxc
libxc
liggghts
lm
luscus
madness Update devel/tbb to 2020.0 and bump dependent ports' revisions [1] 2019-12-26 16:25:22 +00:00
maeparser
massxpert
mbdyn
mcstas
mcstas-comps
mcxtrace
mcxtrace-comps
mdynamix
medit
meep
metaphysicl
minc2
mmdb2
mmtf-cpp
mol2ps - Change LDPATH to FPC_LDPATH into lang/fpc/Makefile. It can be changed from 2019-12-31 15:11:18 +00:00
molgif
molscript
molsketch
mpb
mpqc
msms
multiwfn
namd
ncnn science/ncnn: Update 20191113 -> 20191223 2019-12-24 07:25:08 +00:00
nest
netcdf
netcdf-cxx
netcdf-fortran
nifticlib
nwchem
nwchem-data
octopus
openbabel
openkim
openkim-models
openmx Resurrect ports depending on devel/openmp. 2020-01-01 11:46:08 +00:00
opensim-core
opensph
opsin
p5-Algorithm-SVMLight
p5-Chemistry-3DBuilder
p5-Chemistry-Bond-Find
p5-Chemistry-Canonicalize
p5-Chemistry-Elements
p5-Chemistry-File-MDLMol
p5-Chemistry-File-Mopac
p5-Chemistry-File-PDB
p5-Chemistry-File-SLN
p5-Chemistry-File-SMARTS
p5-Chemistry-File-SMILES
p5-Chemistry-File-VRML
p5-Chemistry-File-XYZ
p5-Chemistry-FormulaPattern
p5-Chemistry-InternalCoords
p5-Chemistry-Isotope
p5-Chemistry-MacroMol
p5-Chemistry-MidasPattern
p5-Chemistry-Mok
p5-Chemistry-Mol
p5-Chemistry-Pattern
p5-Chemistry-Reaction
p5-Chemistry-Ring
p5-Geo-BUFR
p5-Geo-Coordinates-Converter
p5-Geo-Coordinates-Converter-iArea
p5-Geo-ReadGRIB
p5-Geo-WebService-Elevation-USGS
p5-Mcstas-Tools
p5-PerlMol
p5-Physics-Unit
packmol
pagmo2 Update devel/tbb to 2020.0 and bump dependent ports' revisions [1] 2019-12-26 16:25:22 +00:00
paje
paraview
pcmsolver
PETSc
pnetcdf
psychopy Deprecate a few ports 2019-12-26 07:54:28 +00:00
pulseview
py-abipy
py-asdf Update to 2.5.0 2019-12-29 12:55:34 +00:00
py-ase science/py-ase: Update 3.18.1 -> 3.19.0 2019-12-27 06:46:45 +00:00
py-avogadrolibs
py-cdo
py-chainer
py-chainer-chemistry science/py-chainer-chemistry: Update 0.6.0 -> 0.7.0 2019-12-22 03:10:17 +00:00
py-chempy
py-coards
py-DendroPy
py-dlib
py-eccodes-python
py-geomet Add py-geomet 0.2.1 2019-12-29 12:46:17 +00:00
py-geometer
py-gpaw
py-GPy
py-GPyOpt
py-gsd
py-h5py
py-hcluster Deprecate a few ports 2019-12-26 07:54:28 +00:00
py-kinematics
py-lifelines
py-MDAnalysis
py-MDAnalysisTests
py-mdp
py-mlpy
py-mmtf-python
py-molmod
py-netCDF4
py-obspy
py-oddt science/py-oddt: Update 0.6 -> 0.7 2019-12-27 05:12:21 +00:00
py-OpenFermion
py-openpiv
py-paida
py-paramz
py-phono3py Resurrect ports depending on devel/openmp. 2020-01-01 11:46:08 +00:00
py-phonopy
py-pupynere
py-pyaixi
py-pydicom
py-PyFR Resurrect ports depending on devel/openmp. 2020-01-01 11:46:08 +00:00
py-pygeodesy
py-pymatgen
py-pymol
py-pyosf
py-PyQuante
py-pysal
py-pyteomics
py-pyteomics.biolccc Deprecate a few ports 2019-12-26 07:54:28 +00:00
py-qcelemental
py-qcengine
py-qspin
py-quantities
py-rmf
py-rmsd
py-ruffus
py-ScientificPython
py-scikit-fuzzy
py-scikit-learn - Update to 0.22 2019-12-17 13:09:33 +00:00
py-scikit-sparse
py-scimath
py-scipy
py-scoria
py-SimpleSpectral
py-spglib
py-tensorflow
py-tensorflow-estimator
py-veusz
py-ws2300
pybrain
pycdf Deprecate a few ports 2019-12-26 07:54:28 +00:00
pynn
qbox
qcl
qmcpack
quantum-espresso science/quantum-espresso: Update 6.4.1 -> 6.5 2019-12-31 19:32:59 +00:00
quantum-espresso-pseudopotentials
qwalk
R-cran-AMORE
R-cran-bayesm
R-cran-cmprsk
R-cran-DCluster
R-cran-e1071
R-cran-eco
R-cran-Epi
R-cran-epicalc
R-cran-etm
R-cran-fastICA
R-cran-kernlab
R-cran-snow
R-cran-som
R-cran-udunits2
rdkit
rmf MFH: r521744 2020-01-01 20:24:02 +00:00
rubygem-ai4r
rubygem-cdo
rubygem-rgeo
rubygem-rgeo-geojson
rubygem-rgeo-proj4
rubygem-rgeo-shapefile
rubygem-ruby-dcl
rubygem-ruby-netcdf
scidavis
siesta
sigrok-cli
sigrok-firmware
sigrok-firmware-fx2lafw
sigrok-firmware-utils
silo
simbody
simgrid
simint
simlib
simsmith
smoldyn
sparta
spglib
step
svmlight
szip
teem
tfel science/tfel: update to version 3.3 2019-12-21 19:53:14 +00:00
tinker
udunits
v_sim
vipster
vmd
voro++
wannier90
wwplot
wxmacmolplt
xcrysden
xdrawchem
xfce4-equake-plugin
yoda
Makefile Resurrect ports depending on devel/openmp. 2020-01-01 11:46:08 +00:00