30 lines
648 B
Makefile
30 lines
648 B
Makefile
# $FreeBSD$
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PORTNAME= stacks
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DISTVERSION= 2.4
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CATEGORIES= biology perl5 python
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MASTER_SITES= http://catchenlab.life.illinois.edu/stacks/source/
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MAINTAINER= jwb@FreeBSD.org
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COMMENT= Software pipeline for building loci from short-read sequences
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LICENSE= GPLv2
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LICENSE_FILE= ${WRKSRC}/LICENSE
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USES= compiler:openmp gmake python shebangfix
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SHEBANG_FILES= scripts/*.pl scripts/*.py \
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scripts/stacks-integrate-alignments scripts/stacks-gdb
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GNU_CONFIGURE= yes
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LDFLAGS+= -lpthread
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.include <bsd.port.pre.mk>
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# Force newer GCC on platforms using GCC 4.2 as base
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.if ${CHOSEN_COMPILER_TYPE} == gcc
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USE_GCC= yes
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.endif
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.include <bsd.port.post.mk>
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