provide input to crafty. This should allow package building to succeed
and has no negative consequences that I know of. It is not clear at
the moment why /dev/fd/3 is not present in the chroot'ed package building
environment, but I wanted to get a fix in before the DP1 ports freeze.
I arrived at this solution after helpful discussions with
<esoha@attbi.com>.
allowing to analyse several proteins at the same time. The proteins can be
superimposed in order to deduce structural alignments and compare their
active sites or any other relevant parts. Amino acid mutations, H-bonds,
angles and distances between atoms are easy to obtain thanks to the
intuitive graphic and menu interface.
Moreover, Swiss-PdbViewer is tightly linked to Swiss-Model, an automated
homology modelling server developped at Glaxo Welcome Experimental Research
in Geneva. Working with these two programs greatly reduces the amount of work
necessary to generate models, as it is possible to thread a protein primary
sequence onto a 3D template and get an immediate feedback of how well the
threaded protein will be accepted by the reference structure before
submitting a request to build missing loops and refine sidechain packing.
Swiss-PdbViewer can also read electron density maps, and provides various
tools to build into the density. In addition, various modelling tools are
integrated and command files for popular energy minimisation packages can be
generated.
Finally, as a special bonus, POV-Ray scenes can be generated from the
current view in order to make stunning ray-traced quality images.
WWW: http://www.expasy.ch/spdbv/
PR: 33902
Submitted by: chuynh@biolateral.com.au
XmHTML does not build: debug.c:113: initializer element is not constant
When trying to build XmHTML-1.1.7_1 on -current as of 7-JAN-2002, I got
the following error during build:
rm -f .libs/debug.lo
cc -O -pipe -DVERSION=1107 -DHAVE_REGEX_H -DHAVE_LIBJPEG -DHAVE_LIBPNG -DMotif -I. -I../include -I../include/common -I../../include -I../../include/common -I../../include/XmHTML -I/usr/X11R6/include -I/usr/local/include -c debug.c -fPIC -DPIC -o .libs/debug.lo
debug.c:113: initializer element is not constant
gmake[2]: *** [debug.o] Fehler 1
Strangely enough, the build continued without rebuilding the remaining
files of this directory. The make install aborted, of course, because
parts of the product had not been built.
(gmake problem)
PR: 34636
Submitted by: gwk@mscsoftware.com
Approved by: Lars.Koeller@Uni-Bielefeld.DE
The maintainer wasn't reachable by myself and by the submitter, so no
review/approval from him.
Approved by: steve
Submitted by: marius@alchemy.franken.de
When the databases/postgresql7 port was updated from postgresql-7.1.x to
postgresql-7.2, libpq-fe.h moved from PREFIX/include/pgsql to
PREFIX/include for reasons I can't figure out.
This applies a band-aid until I can get clarification from the postgresql
port maintainer <girgen@partitur.se>, but I think the port might be
"broken" in its placement of some header files.
Reported by: kris
