world download and run software to band together to make one of the largest
supercomputers in the world. Every computer makes the project closer to our
goals.
Folding@Home uses novel computational methods coupled to distributed computing,
to simulate problems thousands to millions of times more challenging than
previously achieved.
WWW: http://folding.standford.edu
PR: ports/101235
Submitted by: Yonatan <onatan@gmail.com>
o add data dir to have working port[1]
PR: 95121[1]
Submitted by: Sangwoo Shim <sangwoos at gmail.com>[1]
This commit is a result of hacks at the CodeFest Akihabara 2006 hosted by FSIJ.
protein similarities that plays a key role in many bioinformatics methods. It
contains about all currently published protein sequences and is continuously
updated.
The computational effort for keeping SIMAP up-to-date is constantly increasing.
Please help to update SIMAP by calculating protein similarities on your
computer.
WWW: http://boinc.bio.wzw.tum.de/boincsimap/
Quoting from www.ncbi.nlm.nih.gov/blast/blast_whatsnew.shtml
Major changes include:
blastall now uses the new engine by default, resulting
in significant performance improvements and enabling
query concatenation for all program types.
PR: ports/98570
Submitted by: maintainer
Approved by: lawrance (mentor, implict)
Approved by: tobez (implicit)
0.08 20/Feb/2006 15:14
Improved referential integrity between nodes,
taxa, and data.
Implemented Fastnexus parser
Node object silently implements Bio::Tree::NodeI
interface if BioPerl is installed
Tree object silently implements Bio::Tree::TreeI
interface if BioPerl is installed
Added convertor methods for XML and CIPRES
Implemented more Matrix methods
Implemented symbol tables in Bio::Phylo::Util::CONSTANT
Implemented visit method for listable objects
Implemented caching infrastructure for calculations
Changed object-model to inside-out arrays
Added Biodiversity measures code by Aki Mimoto
Moved constants and exceptions to Bio::Phylo::Util::*
Fixed memory leak due to circular references
- refine BROKEN to make portlint happier
- patch to use on Scalar::Util instead of WeakRef
- mark IGNORE under old perl which don't support weak reference
PR: 96656
Submitted by: leeym
Approved by: maintainer
bioinformatics applications. This allows various applications to be used
with common Bioperl objects.
WWW: http://bioperl.org/
PR: ports/93675
Submitted by: Mauricio Herrera Cuadra <mauricio@arareko.net>
bioinformatics applications. This allows various applications to be used
with common Bioperl objects.
WWW: http://bioperl.org/
PR: ports/93674
Submitted by: Mauricio Herrera Cuadra <mauricio@arareko.net>
