biology/fasda: Fast and simple differential analysis
FASDA aims to provide a fast and simple differential analysis tool that just works and does not require any knowledge beyond basic Unix command-line skills. The code is written entirely in C to maximize efficiency and portability, and to provide a simple command-line user interface.
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SUBDIR += emboss
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SUBDIR += emboss
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SUBDIR += erminej
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SUBDIR += erminej
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SUBDIR += exonerate
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SUBDIR += exonerate
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SUBDIR += fasda
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SUBDIR += fasta
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SUBDIR += fasta
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SUBDIR += fasta3
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SUBDIR += fasta3
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SUBDIR += fastahack
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SUBDIR += fastahack
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PORTNAME= fasda
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DISTVERSION= 0.1.2
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CATEGORIES= biology
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MAINTAINER= jwb@FreeBSD.org
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COMMENT= Fast and simple differential analysis
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WWW= https://github.com/auerlab/fasda
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LICENSE= BSD2CLAUSE
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LICENSE_FILE= ${WRKSRC}/LICENSE
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LIB_DEPENDS= libxtend.so:devel/libxtend libbiolibc.so:biology/biolibc
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USES= localbase
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USE_GITHUB= yes
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GH_ACCOUNT= auerlab
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MAKE_ENV= VERSION=${PORTVERSION}
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INSTALL_TARGET= install-strip
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pre-build:
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cd ${WRKSRC} && make depend LOCALBASE=${LOCALBASE}
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.include <bsd.port.mk>
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TIMESTAMP = 1670865129
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SHA256 (auerlab-fasda-0.1.2_GH0.tar.gz) = ea6003795b462286d4b7ea11924f424cdea418a345ceeccd1a04d679edf2374e
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SIZE (auerlab-fasda-0.1.2_GH0.tar.gz) = 57295
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FASDA aims to provide a fast and simple differential analysis tool
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that just works and does not require any knowledge beyond basic Unix
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command-line skills. The code is written entirely in C to maximize
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efficiency and portability, and to provide a simple command-line user
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interface.
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bin/fasda
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libexec/fasda/abundance
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libexec/fasda/fold-change
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libexec/fasda/normalize
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libexec/fasda/pval-sim
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man/man1/fasda-abundance.1.gz
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man/man1/fasda-fold-change.1.gz
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man/man1/fasda-normalize.1.gz
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man/man1/fasda-pval-sim.1.gz
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man/man1/fasda.1.gz
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