To compile Rmd files to PDF with a Makefile
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#!/usr/bin/env make
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%.pdf: %.Rmd
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@R --quiet --file=make.R --args $<
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#!/usr/bin/env R
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# Render R markdown to PDF.
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# Invoke with:
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# > R -q -f make.R --args my_report.Rmd
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# load packages
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require(rmarkdown)
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# require a parameter naming file to render
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if (length(args) == 0) {
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stop("Error: missing file operand", call. = TRUE)
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} else {
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# read report to render from command line
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for (rmd in commandArgs(trailingOnly = TRUE)) {
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# render Rmd to PDF
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if ( grepl("\\.Rmd$", rmd) && file.exists(rmd)) {
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render(rmd, pdf_document())
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} else {
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print(paste("Ignoring: ", rmd))
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}
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}
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}
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