d0fed2f4df
Fixes a bug whereby ‘guix locate’ would pick the system database, then decide it’s too old, try to update it, and fail because it’s not writable by unprivileged users. Fixes <https://issues.guix.gnu.org/66612>. * guix/scripts/locate.scm (file-age): New procedure. (suitable-database): Add ‘age-update-threshold’ parameter and honor it. (guix-locate): Remove ‘file-age’. Pass ‘age-update-threshold’ to the ‘database’ option. Reported-by: Matt Wette <matt.wette@gmail.com>
669 lines
25 KiB
Scheme
669 lines
25 KiB
Scheme
;;; GNU Guix --- Functional package management for GNU
|
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;;; Copyright © 2022, 2023 Ludovic Courtès <ludo@gnu.org>
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;;; Copyright © 2023 Antoine R. Dumont <antoine.romain.dumont@gmail.com>
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;;;
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;;; This file is part of GNU Guix.
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;;;
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;;; GNU Guix is free software; you can redistribute it and/or modify it
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;;; under the terms of the GNU General Public License as published by
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;;; the Free Software Foundation; either version 3 of the License, or (at
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;;; your option) any later version.
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;;;
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;;; GNU Guix is distributed in the hope that it will be useful, but
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;;; WITHOUT ANY WARRANTY; without even the implied warranty of
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;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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;;; GNU General Public License for more details.
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;;;
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;;; You should have received a copy of the GNU General Public License
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;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
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(define-module (guix scripts locate)
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#:use-module ((guix config) #:select (%localstatedir))
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#:use-module (guix i18n)
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#:use-module ((guix ui)
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#:select (show-version-and-exit
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show-bug-report-information
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with-error-handling
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string->number*
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display-hint
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leave-on-EPIPE))
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#:use-module (guix diagnostics)
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#:use-module (guix scripts)
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#:use-module (sqlite3)
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#:use-module (ice-9 match)
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#:use-module (ice-9 format)
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#:use-module (guix store)
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#:use-module (guix monads)
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#:autoload (guix combinators) (fold2)
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#:autoload (guix grafts) (%graft?)
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#:autoload (guix store roots) (gc-roots)
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#:use-module (guix derivations)
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#:use-module (guix packages)
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#:use-module (guix profiles)
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#:autoload (guix progress) (progress-reporter/bar
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call-with-progress-reporter)
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#:use-module (guix sets)
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#:use-module ((guix utils) #:select (cache-directory))
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#:autoload (guix build utils) (find-files mkdir-p)
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#:autoload (gnu packages) (fold-packages)
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#:use-module (srfi srfi-1)
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#:use-module (srfi srfi-9)
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#:use-module (srfi srfi-37)
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#:use-module (srfi srfi-71)
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#:export (guix-locate))
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(define %db-schema-version
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;; Current database schema version.
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3)
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;; The following schema is the full schema at the `%db-schema-version`. It
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;; should be modified according to the development required and
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;; `%db-schema-version` should be bumped. If the schema needs modification
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;; across time, those should be changed directly in the full-schema and the
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;; incremental changes should be referenced as migration step below for the
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;; new `%db-schema-version` (for the existing dbs to know what to migrate).
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(define %db-schema
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"
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create table if not exists SchemaVersion (
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version integer primary key not null,
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date integer,
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store text not null, -- value of (%store-prefix)
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unique (version)
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);
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create table if not exists Packages (
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id integer primary key autoincrement not null,
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name text not null,
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version text not null,
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output text,
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unique (name, version) -- add uniqueness constraint
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);
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create table if not exists Directories (
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id integer primary key autoincrement not null,
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name text not null,
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package integer not null,
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foreign key (package) references Packages(id) on delete cascade,
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unique (name, package) -- add uniqueness constraint
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);
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create table if not exists Files (
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name text not null,
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basename text not null,
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directory integer not null,
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foreign key (directory) references Directories(id) on delete cascade
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unique (name, basename, directory) -- add uniqueness constraint
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);
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create index if not exists IndexFiles on Files(basename);")
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;; List of tuple ((version . sqlite schema migration script)). There should be
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;; as much version increments as step needed to migrate the db.
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(define schema-to-migrate '((1 . "
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create table if not exists SchemaVersion (
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version integer primary key not null,
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unique (version)
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);
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")
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(2 . "
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alter table SchemaVersion
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add column date date;
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")
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(3 . "
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alter table Packages
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add column output text;
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")))
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(define (call-with-database file proc)
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(let ((db (sqlite-open file)))
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(dynamic-wind
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(lambda () #t)
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(lambda ()
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(ensure-latest-database-schema db)
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(proc db))
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(lambda () (sqlite-close db)))))
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(define (ensure-latest-database-schema db)
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"Ensure DB follows the latest known version of the schema."
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(define (initialize)
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(sqlite-exec db %db-schema)
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(insert-version db %db-schema-version))
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(let ((version (false-if-exception (read-version db))))
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(cond ((not version)
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(initialize))
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((> version %db-schema-version)
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(initialize))
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(else
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(catch #t
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(lambda ()
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;; Migrate from the current version to the full migrated schema.
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;; This can raise sqlite-error if the db is not properly configured yet
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(let loop ((current version))
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(when (< current %db-schema-version)
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;; when the current db version is older than the current application
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(let* ((next (+ current 1))
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(migration (assoc-ref schema-to-migrate next)))
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(when migration
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(sqlite-exec db migration)
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(insert-version db next))
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(loop next)))))
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(lambda _
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;; Exception handler in case failure to read an inexisting db:
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;; fallback to bootstrap the schema.
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(initialize)))))))
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(define (last-insert-row-id db) ;XXX: copied from (guix store database)
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;; XXX: (sqlite3) currently lacks bindings for 'sqlite3_last_insert_rowid'.
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;; Work around that.
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(define stmt
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(sqlite-prepare db "SELECT last_insert_rowid();"
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#:cache? #t))
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(match (sqlite-fold cons '() stmt)
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((#(id)) id)
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(_ #f)))
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(define (insert-version db version)
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"Insert application VERSION into the DB."
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(define stmt-insert-version
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(sqlite-prepare db "\
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INSERT OR IGNORE INTO SchemaVersion(version, date, store)
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VALUES (:version, CURRENT_TIMESTAMP, :store);"
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#:cache? #t))
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(sqlite-exec db "begin immediate;")
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(sqlite-bind-arguments stmt-insert-version
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#:version version
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#:store (%store-prefix))
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(sqlite-fold (const #t) #t stmt-insert-version)
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(sqlite-exec db "commit;"))
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(define (read-version db)
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"Read the current application version from the DB."
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(define stmt-select-version (sqlite-prepare db "\
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SELECT version FROM SchemaVersion ORDER BY version DESC LIMIT 1;"
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#:cache? #f))
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(match (sqlite-fold cons '() stmt-select-version)
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((#(version))
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version)))
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(define user-database-file
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;; Default user database file name.
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(string-append (cache-directory #:ensure? #f)
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"/locate/db.sqlite"))
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(define system-database-file
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;; System-wide database file name.
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(string-append %localstatedir "/cache/guix/locate/db.sqlite"))
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(define (file-age stat)
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"Return the age of the file denoted by STAT in seconds."
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(- (current-time) (stat:mtime stat)))
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(define (suitable-database create? age-update-threshold)
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"Return a suitable database file. When CREATE? is true, the returned
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database will be opened for writing; otherwise, return the most recent one,
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user or system. Do not return the system database if it is older than
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AGE-UPDATE-THRESHOLD seconds."
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(if (zero? (getuid))
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system-database-file
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(if create?
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user-database-file
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(let ((system (stat system-database-file #f))
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(user (stat user-database-file #f)))
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(if user
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(if (and system
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(> (stat:mtime system) (stat:mtime user))
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(< (file-age system) age-update-threshold))
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system-database-file
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user-database-file)
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(if (and system
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(< (file-age system) age-update-threshold))
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system-database-file
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user-database-file))))))
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(define (clear-database db)
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"Drop packages and files from DB."
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(sqlite-exec db "BEGIN IMMEDIATE;")
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(sqlite-exec db "DELETE FROM Files;")
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(sqlite-exec db "DELETE FROM Directories;")
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(sqlite-exec db "DELETE FROM Packages;")
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(sqlite-exec db "COMMIT;")
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(sqlite-exec db "VACUUM;"))
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(define (print-statistics file)
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"Print statistics about the database in FILE."
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(define (count db table)
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(define stmt
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(sqlite-prepare
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db (string-append "SELECT COUNT(*) FROM " table ";")))
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(match (sqlite-fold cons '() stmt)
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((#(number)) number)))
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(call-with-database file
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(lambda (db)
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(format #t (G_ "schema version:\t~a~%")
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(read-version db))
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(format #t (G_ "number of packages:\t~9h~%")
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(count db "Packages"))
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(format #t (G_ "number of files:\t~9h~%")
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(count db "Files"))
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(format #t (G_ "database size:\t~9h MiB~%")
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(inexact->exact
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(round (/ (stat:size (stat file))
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(expt 2 20))))))))
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;;;
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;;; Indexing from local packages.
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;;;
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(define (insert-files db package version outputs directories)
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"Insert DIRECTORIES files belonging to VERSION PACKAGE (with OUTPUTS)."
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(define stmt-select-package
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(sqlite-prepare db "\
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SELECT id FROM Packages WHERE name = :name AND version = :version LIMIT 1;"
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#:cache? #t))
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(define stmt-insert-package
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(sqlite-prepare db "\
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INSERT OR IGNORE INTO Packages(name, version, output)
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VALUES (:name, :version, :output);"
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#:cache? #t))
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(define stmt-select-directory
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(sqlite-prepare db "\
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SELECT id FROM Directories WHERE package = :package;"
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#:cache? #t))
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(define stmt-insert-directory
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(sqlite-prepare db "\
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INSERT OR IGNORE INTO Directories(name, package) -- to avoid spurious writes
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VALUES (:name, :package);"
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#:cache? #t))
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(define stmt-insert-file
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(sqlite-prepare db "\
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INSERT OR IGNORE INTO Files(name, basename, directory)
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VALUES (:name, :basename, :directory);"
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#:cache? #t))
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(sqlite-exec db "begin immediate;")
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;; 1 record per output
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(for-each (lambda (output)
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(sqlite-reset stmt-insert-package)
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(sqlite-bind-arguments stmt-insert-package
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#:name package
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#:version version
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#:output output)
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(sqlite-fold (const #t) #t stmt-insert-package))
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outputs)
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(sqlite-bind-arguments stmt-select-package
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#:name package
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#:version version)
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(match (sqlite-fold cons '() stmt-select-package)
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((#(package-id))
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(for-each (lambda (directory)
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(define (strip file)
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(string-drop file (+ (string-length directory) 1)))
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;; If there's already a directory associated with PACKAGE-ID,
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;; not necessarily the same directory, skip it. That keeps
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;; the database slimmer at the expense of not recording
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;; variants of the same package; it also makes indexing
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;; faster.
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(sqlite-reset stmt-select-directory)
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(sqlite-bind-arguments stmt-select-directory
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#:package package-id)
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(when (null? (sqlite-fold cons '() stmt-select-directory))
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;; DIRECTORY is missing so insert it and traverse it.
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(sqlite-reset stmt-insert-directory)
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(sqlite-bind-arguments stmt-insert-directory
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#:name (store-path-base directory)
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#:package package-id)
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(sqlite-fold (const #t) #t stmt-insert-directory)
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(let ((directory-id (last-insert-row-id db)))
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(for-each (lambda (file)
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;; If DIRECTORY is a symlink, (find-files
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;; DIRECTORY) returns the DIRECTORY singleton.
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(unless (string=? file directory)
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(sqlite-reset stmt-insert-file)
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(sqlite-bind-arguments stmt-insert-file
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#:name (strip file)
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#:basename
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(basename file)
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#:directory
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directory-id)
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(sqlite-fold (const #t) #t stmt-insert-file)))
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(find-files directory)))))
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directories)))
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(sqlite-exec db "commit;"))
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(define (insert-package db package)
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"Insert all the files of PACKAGE into DB."
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(define stmt-select-package-output
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(sqlite-prepare db "\
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SELECT output FROM Packages WHERE name = :name AND version = :version"
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#:cache? #t))
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(define (known-outputs package)
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;; Return the list of outputs of PACKAGE already in DB.
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(sqlite-bind-arguments stmt-select-package-output
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#:name (package-name package)
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#:version (package-version package))
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(match (sqlite-fold cons '() stmt-select-package-output)
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((#(outputs ...)) outputs)
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(() '())))
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(with-monad %store-monad
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;; Since calling 'package->derivation' is expensive, do not call it if the
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;; outputs of PACKAGE at VERSION are already in DB.
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(munless (lset= string=?
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(known-outputs package)
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(package-outputs package))
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(mlet %store-monad ((drv (package->derivation package #:graft? #f)))
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(match (derivation->output-paths drv)
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(((labels . directories) ...)
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(when (every file-exists? directories)
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(insert-files
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db (package-name package) (package-version package) (package-outputs package)
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directories))
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(return #t)))))))
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(define (insert-packages-with-progress db packages insert-package)
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"Insert PACKAGES into DB with progress bar reporting, calling INSERT-PACKAGE
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for each package to insert."
|
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(let* ((count (length packages))
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(prefix (format #f (G_ "indexing ~h packages") count))
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(progress (progress-reporter/bar count prefix)))
|
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(call-with-progress-reporter progress
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(lambda (report)
|
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(for-each (lambda (package)
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(insert-package db package)
|
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(report))
|
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packages)))))
|
||
|
||
(define (index-packages-from-store-with-db db)
|
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"Index local store packages using DB."
|
||
(with-store store
|
||
(parameterize ((%graft? #f))
|
||
(define (insert-package-from-store db package)
|
||
(run-with-store store (insert-package db package)))
|
||
(let ((packages (fold-packages
|
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cons
|
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'()
|
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#:select? (lambda (package)
|
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(and (not (hidden-package? package))
|
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(not (package-superseded package))
|
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(supported-package? package))))))
|
||
(insert-packages-with-progress
|
||
db packages insert-package-from-store)))))
|
||
|
||
|
||
;;;
|
||
;;; Indexing from local profiles.
|
||
;;;
|
||
|
||
(define (all-profiles)
|
||
"Return the list of system profiles."
|
||
(delete-duplicates
|
||
(filter-map (lambda (root)
|
||
(if (file-exists? (string-append root "/manifest"))
|
||
root
|
||
(let ((root (string-append root "/profile")))
|
||
(and (file-exists? (string-append root "/manifest"))
|
||
root))))
|
||
(gc-roots))))
|
||
|
||
(define (profiles->manifest-entries profiles)
|
||
"Return deduplicated manifest entries across all PROFILES."
|
||
(let loop ((visited (set))
|
||
(profiles profiles)
|
||
(entries '()))
|
||
(match profiles
|
||
(()
|
||
entries)
|
||
((profile . rest)
|
||
(match (false-if-exception (profile-manifest profile))
|
||
(#f
|
||
;; PROFILE's manifest is unreadable for some reason such as an
|
||
;; unsupported version.
|
||
(loop visited rest entries))
|
||
(manifest
|
||
(let ((entries visited
|
||
(fold2 (lambda (entry lst visited)
|
||
(let ((item (manifest-entry-item entry)))
|
||
(if (set-contains? visited item)
|
||
(values lst visited)
|
||
(values (cons entry lst)
|
||
(set-insert item
|
||
visited)))))
|
||
entries
|
||
visited
|
||
(manifest-transitive-entries manifest))))
|
||
(loop visited rest entries))))))))
|
||
|
||
(define (insert-manifest-entry db entry)
|
||
"Insert a manifest ENTRY into DB."
|
||
(insert-files db (manifest-entry-name entry)
|
||
(manifest-entry-version entry)
|
||
(list (manifest-entry-output entry))
|
||
(list (manifest-entry-item entry)))) ;FIXME: outputs?
|
||
|
||
(define (index-packages-from-manifests-with-db db)
|
||
"Index packages entries into DB from the system manifests."
|
||
(info (G_ "traversing local profile manifests...~%"))
|
||
(let ((entries (profiles->manifest-entries (all-profiles))))
|
||
(insert-packages-with-progress db entries insert-manifest-entry)))
|
||
|
||
|
||
|
||
;;;
|
||
;;; Search.
|
||
;;;
|
||
|
||
(define-record-type <package-match>
|
||
(package-match name version output file)
|
||
package-match?
|
||
(name package-match-name)
|
||
(version package-match-version)
|
||
(output package-match-output)
|
||
(file package-match-file))
|
||
|
||
(define* (matching-packages db file #:key glob?)
|
||
"Return a list of <package-match> records, one for each package containing
|
||
FILE. When GLOB? is true, interpret FILE as a glob pattern."
|
||
(define match-stmt
|
||
(if glob?
|
||
"f.basename GLOB :file"
|
||
"f.basename = :file"))
|
||
|
||
(define lookup-stmt
|
||
(sqlite-prepare db (string-append "\
|
||
SELECT p.name, p.version, p.output, d.name, f.name
|
||
FROM Packages p
|
||
INNER JOIN Files f, Directories d
|
||
ON " match-stmt "
|
||
AND d.id = f.directory
|
||
AND p.id = d.package;")))
|
||
|
||
(define prefix
|
||
(match (sqlite-fold (lambda (value _) value)
|
||
#f
|
||
(sqlite-prepare db "SELECT store FROM SchemaVersion;"))
|
||
(#(prefix) prefix)))
|
||
|
||
(sqlite-bind-arguments lookup-stmt #:file file)
|
||
(sqlite-fold (lambda (result lst)
|
||
(match result
|
||
(#(package version output directory file)
|
||
(cons (package-match package version output
|
||
(string-append prefix "/"
|
||
directory "/" file))
|
||
lst))))
|
||
'() lookup-stmt))
|
||
|
||
(define (print-matching-results matches)
|
||
"Print the MATCHES matching results."
|
||
(for-each (lambda (result)
|
||
(let ((name (package-match-name result))
|
||
(version (package-match-version result))
|
||
(output (package-match-output result))
|
||
(file (package-match-file result)))
|
||
(format #t "~20a ~a~%"
|
||
(string-append name "@" version
|
||
(match output
|
||
("out" "")
|
||
(_ (string-append ":" output))))
|
||
file)))
|
||
matches))
|
||
|
||
|
||
;;;
|
||
;;; Options.
|
||
;;;
|
||
|
||
(define (show-help)
|
||
(display (G_ "Usage: guix locate [OPTIONS...] FILE...
|
||
Locate FILE and return the list of packages that contain it.\n"))
|
||
(display (G_ "
|
||
-g, --glob interpret FILE as a glob pattern"))
|
||
(display (G_ "
|
||
--stats display database statistics"))
|
||
(display (G_ "
|
||
-u, --update force a database update"))
|
||
(display (G_ "
|
||
--clear clear the database"))
|
||
(display (G_ "
|
||
--database=FILE store the database in FILE"))
|
||
(newline)
|
||
(display (G_ "
|
||
--method=METHOD use METHOD to select packages to index; METHOD can
|
||
be 'manifests' (fast) or 'store' (slower)"))
|
||
(newline)
|
||
(display (G_ "
|
||
-h, --help display this help and exit"))
|
||
(display (G_ "
|
||
-V, --version display version information and exit"))
|
||
(show-bug-report-information))
|
||
|
||
(define %options
|
||
(list (option '(#\h "help") #f #f
|
||
(lambda args (leave-on-EPIPE (show-help)) (exit 0)))
|
||
(option '(#\V "version") #f #f
|
||
(lambda (opt name arg result)
|
||
(show-version-and-exit "guix locate")))
|
||
(option '(#\g "glob") #f #f
|
||
(lambda (opt name arg result)
|
||
(alist-cons 'glob? #t result)))
|
||
(option '("stats") #f #f
|
||
(lambda (opt name arg result)
|
||
(alist-cons 'stats? #t result)))
|
||
(option '("database") #f #t
|
||
(lambda (opt name arg result)
|
||
(alist-cons 'database (const arg)
|
||
(alist-delete 'database result))))
|
||
(option '(#\u "update") #f #f
|
||
(lambda (opt name arg result)
|
||
(alist-cons 'update? #t result)))
|
||
(option '("clear") #f #f
|
||
(lambda (opt name arg result)
|
||
(alist-cons 'clear? #t result)))
|
||
(option '(#\m "method") #f #t
|
||
(lambda (opt name arg result)
|
||
(match arg
|
||
((or "manifests" "store")
|
||
(alist-cons 'method (string->symbol arg)
|
||
(alist-delete 'method result)))
|
||
(_
|
||
(leave (G_ "~a: unknown indexing method~%"))))))))
|
||
|
||
(define %default-options
|
||
`((database . ,suitable-database)
|
||
(method . manifests)))
|
||
|
||
|
||
;;;
|
||
;;; Entry point.
|
||
;;;
|
||
|
||
(define-command (guix-locate . args)
|
||
(category packaging)
|
||
(synopsis "search for packages providing a given file")
|
||
|
||
(define age-update-threshold
|
||
;; Time since database modification after which an update is triggered.
|
||
(* 2 30 (* 24 60 60)))
|
||
|
||
(define age-cleanup-threshold
|
||
;; Time since database modification after which it is cleared. This is to
|
||
;; avoid having stale info in the database and an endlessly growing
|
||
;; database.
|
||
(* 9 30 (* 24 60 60)))
|
||
|
||
(with-error-handling
|
||
(let* ((opts (parse-command-line args %options
|
||
(list %default-options)
|
||
#:build-options? #f
|
||
#:argument-handler
|
||
(lambda (arg result)
|
||
(alist-cons 'argument arg
|
||
result))))
|
||
(clear? (assoc-ref opts 'clear?))
|
||
(update? (assoc-ref opts 'update?))
|
||
(glob? (assoc-ref opts 'glob?))
|
||
(database ((assoc-ref opts 'database) update? age-update-threshold))
|
||
(method (assoc-ref opts 'method))
|
||
(files (reverse (filter-map (match-lambda
|
||
(('argument . arg) arg)
|
||
(_ #f))
|
||
opts))))
|
||
(define* (populate-database database clear?)
|
||
(mkdir-p (dirname database))
|
||
(call-with-database database
|
||
(lambda (db)
|
||
(when clear?
|
||
(clear-database db))
|
||
(match method
|
||
('manifests
|
||
(index-packages-from-manifests-with-db db))
|
||
('store
|
||
(index-packages-from-store-with-db db))
|
||
(_
|
||
(leave (G_ "~a: unknown indexing method~%") method))))))
|
||
|
||
;; Populate the database if needed.
|
||
(let* ((stat (stat database #f))
|
||
(age (and stat (file-age stat)))
|
||
(clear? (or clear?
|
||
(and age (>= age age-cleanup-threshold)))))
|
||
(when (or update? clear?
|
||
(not stat)
|
||
(>= age age-update-threshold))
|
||
(when clear?
|
||
(info (G_ "clearing database...~%")))
|
||
(info (G_ "indexing files from ~a...~%") (%store-prefix))
|
||
(populate-database database clear?)))
|
||
|
||
(if (assoc-ref opts 'stats?)
|
||
(print-statistics database)
|
||
(match (call-with-database database
|
||
(lambda (db)
|
||
(append-map (lambda (file)
|
||
(matching-packages db file
|
||
#:glob? glob?))
|
||
files)))
|
||
(()
|
||
(if (null? files)
|
||
(unless update?
|
||
(leave (G_ "no files to search for~%")))
|
||
(leave (N_ "file~{ '~a'~} not found in database '~a'~%"
|
||
"files~{ '~a'~} not found in database '~a'~%"
|
||
(length files))
|
||
files database)))
|
||
(matches
|
||
(leave-on-EPIPE
|
||
(print-matching-results matches))))))))
|