e046d6d443
* gnu/packages/potassco.scm (python-telingo): Update to 2.1.3. [source]: Drop obsolete patch. * gnu/packages/patches/python-telingo-fix-comparison.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly.
615 lines
26 KiB
Scheme
615 lines
26 KiB
Scheme
;;; GNU Guix --- Functional package management for GNU
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;;; Copyright © 2022–2024 Liliana Marie Prikler <liliana.prikler@gmail.com>
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;;; Copyright © 2023 Simon Tournier <zimon.toutoune@gmail.com>
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;;; Copyright © 2023 David Elsing <david.elsing@posteo.net>
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;;; Copyright © 2024 Ricardo Wurmus <rekado@elephly.net>
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;;;
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;;; This file is part of GNU Guix.
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;;;
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;;; GNU Guix is free software; you can redistribute it and/or modify it
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;;; under the terms of the GNU General Public License as published by
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;;; the Free Software Foundation; either version 3 of the License, or (at
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;;; your option) any later version.
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;;;
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;;; GNU Guix is distributed in the hope that it will be useful, but
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;;; WITHOUT ANY WARRANTY; without even the implied warranty of
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;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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;;; GNU General Public License for more details.
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;;;
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;;; You should have received a copy of the GNU General Public License
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;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
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(define-module (gnu packages potassco)
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#:use-module ((guix licenses) #:prefix license:)
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#:use-module (gnu packages)
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#:use-module (guix gexp)
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#:use-module (guix packages)
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#:use-module (guix download)
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#:use-module (guix git-download)
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#:use-module (guix gexp)
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#:use-module (guix utils)
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#:use-module (guix build-system cmake)
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#:use-module (guix build-system emacs)
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#:use-module (guix build-system python)
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#:use-module (guix build-system pyproject)
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#:use-module (gnu packages bison)
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#:use-module (gnu packages check)
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#:use-module (gnu packages cpp)
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#:use-module (gnu packages graphviz)
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#:use-module (gnu packages libffi)
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#:use-module (gnu packages lua)
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#:use-module (gnu packages pkg-config)
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#:use-module (gnu packages python)
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#:use-module (gnu packages python-build)
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#:use-module (gnu packages python-web)
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#:use-module (gnu packages python-xyz)
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#:use-module (gnu packages re2c)
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#:use-module (gnu packages sphinx))
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(define-public libpotassco
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;; No public release, update together with clasp
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(let ((revision "2")
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(commit "69b677f026c53d5a0a794db17691a1eb8bce8c6b"))
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(package
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(name "libpotassco")
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(version (git-version "0.0" revision commit))
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(source (origin
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(method git-fetch)
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(uri (git-reference
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(url "https://github.com/potassco/libpotassco")
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(commit commit)))
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(file-name (git-file-name name version))
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(modules '((guix build utils)))
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(snippet
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#~(begin
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(delete-file "tests/catch.hpp")
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(substitute* (find-files "tests" "\\.cpp")
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(("\"catch.hpp\"") "<catch/catch.hpp>"))))
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(sha256
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(base32
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"1c69njg30dha1zy6j17gghjg3lgambz0pipxkgxadmrkvsb20z2k"))))
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(arguments
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`(#:configure-flags '("-DLIB_POTASSCO_BUILD_TESTS=on"
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"-DLIB_POTASSCO_INSTALL_LIB=on"
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"-DBUILD_SHARED_LIBS=on")
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#:phases
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(modify-phases %standard-phases
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(add-after 'unpack 'patch-cmake
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(lambda _
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(substitute* "CMakeLists.txt"
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;; clasp expects lowercase potassco and include directory is
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;; lowercase as well, so let's use that
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(("\"cmake/Potassco\"") "\"cmake/potassco\"")
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(("PotasscoConfig\\.cmake") "potassco-config.cmake")
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(("PotasscoConfigVersion\\.cmake")
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"potassco-config-version.cmake"))
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(rename-file "cmake/PotasscoConfig.cmake.in"
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"cmake/potassco-config.cmake.in"))))))
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(build-system cmake-build-system)
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(native-inputs (list catch2-1))
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(home-page "https://potassco.org/")
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(synopsis "Utility library for Potassco's projects")
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(description "@code{libpotassco} is a utility library providing functions
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and datatypes for
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@itemize
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@item parsing, writing, and converting logic programs in aspif and smodels
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format,
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@item passing information between a grounder and a solver,
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@item and defining and parsing command-line options and for creating
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command-line applications.
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@end itemize
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Furthermore, it comes with the tool @command{lpconvert} that converts either
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between aspif and smodels format or to a human-readable text format.")
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(license license:expat))))
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(define-public clasp
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(package
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(name "clasp")
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(version "3.3.10")
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(source (origin
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(method git-fetch)
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(uri (git-reference
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(url "https://github.com/potassco/clasp")
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(commit (string-append "v" version))))
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(file-name (git-file-name name version))
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(sha256
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(base32
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"0qap7rar8a5mkqz28n2hnvr4cfv5x0rh4zs3wdp919dw4d034chr"))))
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(build-system cmake-build-system)
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(arguments
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`(#:configure-flags '("-DCLASP_BUILD_TESTS=on"
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"-DCLASP_INSTALL_LIB=on"
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"-DCLASP_USE_LOCAL_LIB_POTASSCO=off"
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"-DBUILD_SHARED_LIBS=on")
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#:phases
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(modify-phases %standard-phases
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(add-after 'unpack 'patch-cmake
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(lambda _
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(substitute* "CMakeLists.txt"
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;; Use lowercase to be consistent with libpotassco
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(("\"cmake/Clasp\"") "\"cmake/clasp\"")
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(("ClaspConfig\\.cmake") "clasp-config.cmake")
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(("ClaspConfigVersion\\.cmake")
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"clasp-config-version.cmake"))
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(substitute* "cmake/ClaspConfig.cmake.in"
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(("find_package\\(Potassco") "find_package(potassco"))
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(rename-file "cmake/ClaspConfig.cmake.in"
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"cmake/clasp-config.cmake.in"))))))
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(inputs
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(list libpotassco))
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(home-page "https://potassco.org/")
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(synopsis "Answer set solver")
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(description "clasp is an answer set solver for (extended) normal and
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disjunctive logic programs. The primary algorithm of clasp relies on
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conflict-driven nogood learning, a technique that proved very successful for
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satisfiability checking (SAT).")
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(license license:expat)))
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(define-public clingo
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(package
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(name "clingo")
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(version "5.7.1")
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(source (origin
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(method git-fetch)
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(uri (git-reference
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(url "https://github.com/potassco/clingo")
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(commit (string-append "v" version))))
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(file-name (git-file-name name version))
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(modules '((guix build utils)))
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(snippet
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#~(begin
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(delete-file-recursively "clasp")
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(delete-file-recursively "libgringo/gen")
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(delete-file-recursively "third_party")))
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(sha256
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(base32
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"1mxl3gwx55sf2ifcb92mfy989c50yqpnq0d0r2mxdqr0riy40hjb"))))
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(build-system cmake-build-system)
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(arguments
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(list
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#:configure-flags #~`("-DCLINGO_BUILD_TESTS=on"
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"-DCLINGO_INSTALL_LIB=on"
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"-DCLINGO_BUILD_STATIC=off"
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"-DCLINGO_BUILD_SHARED=on"
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"-DCLINGO_USE_LOCAL_CLASP=off"
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"-DCLINGO_USE_LOCAL_CATCH=off")
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#:phases
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#~(modify-phases %standard-phases
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(add-after 'unpack 'patch-cmake
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(lambda _
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(substitute* "CMakeLists.txt"
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(("add_subdirectory\\(clasp\\)")
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"find_package(clasp REQUIRED)")
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(("add_subdirectory\\(third_party\\)")
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(string-append
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"find_package(tsl-hopscotch-map)\n"
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"find_package(tl-optional)\n"
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"find_package(mpark_variant)\n"
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"find_package(tsl-sparse-map)\n"
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"find_package(tsl-ordered-map)\n"
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"find_package(wide-integer)\n"
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"find_package(Catch2 3 REQUIRED)")))
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(substitute* "libclingo/CMakeLists.txt"
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(("\"cmake/Clingo\"") "\"cmake/clingo\"")
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(("ClingoConfig\\.cmake") "clingo-config.cmake")
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(("ClingoConfigVersion\\.cmake")
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"clingo-config-version.cmake"))
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(substitute* "libgringo/CMakeLists.txt"
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(("mpark::variant") "mpark_variant")
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(("math::wide_integer") "wide-integer::wide-integer"))
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(substitute* "cmake/ClingoConfig.cmake.in"
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(("find_package\\(Clasp") "find_package(clasp"))
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(rename-file "cmake/ClingoConfig.cmake.in"
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"cmake/clingo-config.cmake.in")))
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(add-after 'unpack 'skip-failing-tests
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(lambda _
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(with-directory-excursion "libclingo/tests"
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(substitute* "CMakeLists.txt"
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(("COMMAND test_clingo" all)
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(string-append all
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" -f "
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"\"${CMAKE_CURRENT_SOURCE_DIR}/good.txt\"")))
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(call-with-output-file "good.txt"
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(lambda (port)
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(for-each (lambda (test) (format port "~s~%" test))
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'("parse-ast-v2" "add-ast-v2" "build-ast-v2"
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"unpool-ast-v2" "parse_term"
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"propagator" "propgator-sequence-mining"
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"symbol" "visitor"))))))))))
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(inputs (list catch2-3 clasp libpotassco))
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(native-inputs (list bison re2c
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mpark-variant
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pkg-config
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tl-optional
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tsl-hopscotch-map
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tsl-ordered-map
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tsl-sparse-map
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wide-integer))
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(home-page "https://potassco.org/")
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(synopsis "Grounder and solver for logic programs")
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(description "Clingo computes answer sets for a given logic program.")
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(license license:expat)))
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(define-public clingo-dl
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(package
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(name "clingo-dl")
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(version "1.5.0")
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(source (origin
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(method git-fetch)
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(uri (git-reference
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(url "https://github.com/potassco/clingo-dl")
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(commit (string-append "v" version))))
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(file-name (git-file-name name version))
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(sha256
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(base32 "0vf51pgwgiac801gr6w5pnxb6wa0kacz09ncrcn25w5siz17g4si"))))
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(build-system cmake-build-system)
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(arguments (list #:tests? #f ; no tests
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#:configure-flags #~`("-DPYCLINGODL_ENABLE=off")))
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(inputs (list clingo))
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(home-page "https://github.com/potassco/clingo-dl")
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(synopsis "Solver for answer set programs modulo difference constraints")
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(description "Clingo-DL is an extension to Clingo that models constraints
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over difference logic.")
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(license license:expat)))
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(define-public plasp
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(package
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(name "plasp")
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(version "3.1.1")
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(source (origin
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(method git-fetch)
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(uri (git-reference
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(url "https://github.com/potassco/plasp")
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(commit (string-append "v" version))))
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(file-name (git-file-name name version))
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(sha256
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(base32 "123v1bjzh7yjwgcc5k55rkfz0lfl8ish5p3z8x3pn8k1svd50xal"))
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(patches (search-patches
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"plasp-fix-normalization.patch"
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"plasp-include-iostream.patch"))))
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(build-system cmake-build-system)
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(arguments
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(list #:tests? #f ; No ‘test’ target
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#:phases
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#~(modify-phases %standard-phases
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(replace 'install
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(lambda* (#:key outputs #:allow-other-keys)
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(copy-recursively "bin"
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(string-append (assoc-ref outputs "out")
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"/bin")))))))
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(inputs (list cxxopts mapbox-variant))
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(home-page "https://potassco.org/")
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(synopsis "ASP planning tools for PDDL")
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(description "@command{plasp} is a tool collection for planning in
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answer set programming. It supports a subset of PDDL 3.1 and SAS 3.")
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(license license:expat)))
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(define-public emacs-pasp-mode
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(let ((commit "59385eb0e8ebcfc8c11dd811fb145d4b0fa3cc92")
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(revision "1"))
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(package
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(name "emacs-pasp-mode")
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(version (git-version "0.1.0" revision commit))
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(source (origin
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(method git-fetch)
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(uri (git-reference
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(url "https://github.com/santifa/pasp-mode")
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(commit commit)))
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(file-name (git-file-name name version))
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(patches
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(search-patches "emacs-pasp-mode-quote-file-names.patch"))
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(sha256
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(base32
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"1ar4vws3izzmir7m870mccci620ns3c5j26dcmwaxavhgw45wcmf"))))
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(build-system emacs-build-system)
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(arguments
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(list
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#:phases
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#~(modify-phases %standard-phases
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(add-after 'unpack 'defconst-version
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(lambda _
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(emacs-batch-edit-file "pasp-mode.el"
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'(progn
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(search-forward-regexp "(defcustom pasp-mode-version")
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(forward-sexp)
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(kill-sexp)
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(backward-sexp)
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(beginning-of-line)
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(kill-sexp)
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(insert (format "(defconst emacs-pasp-version \"%s\" %s)"
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#$version (cadr kill-ring)))
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(basic-save-buffer)))))
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(add-after 'unpack 'hardcode-clingo
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(lambda* (#:key inputs #:allow-other-keys)
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(emacs-substitute-variables "pasp-mode.el"
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("pasp-clingo-path"
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(search-input-file inputs "/bin/clingo"))))))))
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(inputs (list clingo))
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(home-page "https://github.com/santifa/pasp-mode")
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(synopsis "Major mode for editing answer set programs")
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(description
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"This package provides a major mode for editing answer set programs,
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in particular ones that can be solved by @command{clingo}.")
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(license license:gpl3+))))
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(define-public (make-lua-clingo name lua)
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(package
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(inherit clingo)
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(name name)
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(version (package-version clingo)) ; for #$version in arguments
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(arguments
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(substitute-keyword-arguments (package-arguments clingo)
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((#:configure-flags flags #~'())
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#~(cons* "-DCLINGO_BUILD_WITH_LUA=yes"
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(string-append "-DLUACLINGO_INSTALL_DIR="
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#$output "/lib/lua/"
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#$(package-version lua))
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"-DCLINGO_USE_LIB=yes"
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#$flags))))
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(inputs (list clingo lua))
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(synopsis "Lua bindings for clingo")
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(description "This package provides Lua bindings to the clingo package,
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making it so that you can write @acronym{ASPs, Answer Set Programs} through
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Lua code.")))
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(define-public lua5.1-clingo (make-lua-clingo "lua5.1-clingo" lua-5.1))
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(define-public lua5.2-clingo (make-lua-clingo "lua5.2-clingo" lua-5.2))
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(define-public python-clingo
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(package
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(inherit clingo)
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(name "python-clingo")
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(version (package-version clingo)) ; for #$version in arguments
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(arguments
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(substitute-keyword-arguments (package-arguments clingo)
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((#:configure-flags flags #~'())
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#~(cons* "-DCLINGO_BUILD_WITH_PYTHON=pip"
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(string-append "-DCMAKE_MODULE_PATH="
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#$(this-package-native-input "python-scikit-build")
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"/lib/cmake/modules")
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"-DCLINGO_USE_LIB=yes"
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#$flags))
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((#:imported-modules _ '())
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`(,@%cmake-build-system-modules
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(guix build python-build-system)))
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((#:modules _ '())
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'((guix build cmake-build-system)
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((guix build python-build-system) #:prefix python:)
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(guix build utils)))
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((#:phases phases #~%standard-phases)
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#~(modify-phases #$phases
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(add-after 'unpack 'fix-failing-tests
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(lambda _
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(substitute* "libpyclingo/clingo/tests/test_conf.py"
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(("ctl\\.solve\\(on_statistics=on_statistics\\)" all)
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(string-append
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all
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"; self.skipTest(\"You shall not fail.\")")))))
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(add-after 'install 'install-distinfo
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(lambda* (#:key inputs outputs #:allow-other-keys)
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(with-directory-excursion (python:site-packages inputs outputs)
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(let ((dir (string-append "clingo-" #$version ".dist-info")))
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(mkdir-p dir)
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(call-with-output-file (string-append dir "/METADATA")
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(lambda (port)
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(format port "Metadata-Version: 1.1~%")
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(format port "Name: clingo~%")
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(format port "Version: ~a~%" #$version)))))))))))
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(inputs (list clingo python-wrapper))
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(propagated-inputs (list python-cffi))
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(native-inputs (modify-inputs (package-native-inputs clingo)
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(prepend python-scikit-build)))
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(synopsis "Python bindings for clingo")
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(description "This package provides Python bindings to the clingo package,
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making it so that you can write @acronym{ASPs, Answer Set Programs} through
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Python code.")))
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(define-public python-clingo-dl
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(package
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(inherit clingo-dl)
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(name "python-clingo-dl")
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(version (package-version clingo-dl))
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(arguments
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(list
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#:configure-flags
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#~(list "-DPYCLINGODL_ENABLE=pip"
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(string-append "-DCMAKE_MODULE_PATH="
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#$(this-package-native-input "python-scikit-build")
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"/lib/cmake/modules"))
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#:tests? #f
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#:imported-modules `(,@%cmake-build-system-modules
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(guix build python-build-system))
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#:modules '((guix build cmake-build-system)
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((guix build python-build-system) #:prefix python:)
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(guix build utils))
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#:phases
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#~(modify-phases %standard-phases
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(add-after 'install 'install-distinfo
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(lambda* (#:key inputs outputs #:allow-other-keys)
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(with-directory-excursion (python:site-packages inputs outputs)
|
||
(let ((dir (string-append "clingodl-" #$version ".dist-info")))
|
||
(mkdir-p dir)
|
||
(call-with-output-file (string-append dir "/METADATA")
|
||
(lambda (port)
|
||
(format port "Metadata-Version: 1.1~%")
|
||
(format port "Name: clingodl~%")
|
||
(format port "Version: ~a~%" #$version))))))))))
|
||
(inputs (modify-inputs (package-inputs clingo-dl)
|
||
(prepend python-wrapper)))
|
||
(propagated-inputs (list python-clingo python-cffi))
|
||
(native-inputs (modify-inputs (package-native-inputs clingo-dl)
|
||
(prepend python-scikit-build)))
|
||
(synopsis "Python bindings for clingo-dl")
|
||
(description "This package allows users to add the clingo-dl propagator
|
||
as a theory to clingo from Python code. It also supports running clingo-dl
|
||
directly from the python command line.")))
|
||
|
||
(define-public python-clorm
|
||
(package
|
||
(name "python-clorm")
|
||
(version "1.5.0")
|
||
(source (origin
|
||
(method git-fetch)
|
||
(uri (git-reference
|
||
(url "https://github.com/potassco/clorm")
|
||
(commit (string-append "v" version))))
|
||
(file-name (git-file-name name version))
|
||
(sha256
|
||
(base32
|
||
"1wbxniq60ph7bdaypcaahym7jxmlnm2zhrfmrgrk441i1iaida24"))))
|
||
(build-system pyproject-build-system)
|
||
(arguments
|
||
(list #:phases
|
||
#~(modify-phases %standard-phases
|
||
(add-before 'check 'fix-breaking-tests
|
||
(lambda _
|
||
;; noclingo tests rely on this being set
|
||
(setenv "CLORM_NOCLINGO" "1")
|
||
(delete-file "tests/test_mypy_query.py")
|
||
(substitute* "tests/test_clingo.py"
|
||
(("self\\.assertTrue\\(os_called\\)" all)
|
||
(string-append "# " all))))))))
|
||
(propagated-inputs (list python-clingo))
|
||
(native-inputs (list python-typing-extensions))
|
||
(home-page "https://potassco.org")
|
||
(synopsis "Object relational mapping to clingo")
|
||
(description "@acronym{Clorm, Clingo ORM} provides an @acronym{ORM,
|
||
Object Relational Mapping} interface to the @acronym{ASP, answer set
|
||
programming} solver clingo. Its goal is to make integration of clingo
|
||
into Python programs easier.")
|
||
(license license:expat)))
|
||
|
||
(define-public python-plingo
|
||
(package
|
||
(name "python-plingo")
|
||
(version "1.1.0")
|
||
(source (origin
|
||
(method git-fetch)
|
||
(uri (git-reference
|
||
(url "https://github.com/potassco/plingo")
|
||
(commit (string-append "v" version))))
|
||
(file-name (git-file-name name version))
|
||
(sha256
|
||
(base32
|
||
"0bdz755c6isp29layvzsw9c4kr12x7b5d8ip37ay3cl4dlq4bid3"))))
|
||
(build-system pyproject-build-system)
|
||
(arguments
|
||
(list #:phases
|
||
#~(modify-phases %standard-phases
|
||
(add-after 'install 'install-script
|
||
(lambda* (#:key outputs #:allow-other-keys)
|
||
(let ((script (string-append (assoc-ref outputs "out")
|
||
"/bin/plingo")))
|
||
(mkdir-p (dirname script))
|
||
(call-with-output-file script
|
||
(lambda (port)
|
||
(display "#!/usr/bin/env python\n" port)
|
||
(display "from plingo import main\n" port)
|
||
(display "main()\n" port)))
|
||
(chmod script #o755)
|
||
;; XXX: Does this cross-compile?
|
||
(patch-shebang script)))))))
|
||
(propagated-inputs (list python-clingo))
|
||
(home-page "https://potassco.org/")
|
||
(synopsis "Solve probabilistic logic programs")
|
||
(description "This package provides a system to solve probabilistic
|
||
logic programs with clingo. It can solve the reasoning tasks of finding
|
||
the most probable model as well as finding all models and their probabilities.")
|
||
(license license:expat)))
|
||
|
||
(define-public python-telingo
|
||
(package
|
||
(name "python-telingo")
|
||
(version "2.1.3")
|
||
(source (origin
|
||
(method git-fetch)
|
||
(uri (git-reference
|
||
(url "https://github.com/potassco/telingo")
|
||
(commit (string-append "v" version))))
|
||
(file-name (git-file-name name version))
|
||
(sha256
|
||
(base32
|
||
"1q6hlh4b5hsa4n5agvmfa9rhsxfd2g6kpl4b9kfccwbmf6dh51k6"))))
|
||
(build-system pyproject-build-system)
|
||
(propagated-inputs (list python-clingo))
|
||
(home-page "https://potassco.org/")
|
||
(synopsis "Solve dynamic temporal logic programs")
|
||
(description "This package provides a system to solve dynamic temporal
|
||
logic programs based on clingo.")
|
||
(license license:expat)))
|
||
|
||
(define-public python-clingraph
|
||
(package
|
||
(name "python-clingraph")
|
||
(version "1.1.2")
|
||
(source (origin
|
||
(method git-fetch)
|
||
(uri (git-reference
|
||
(url "https://github.com/potassco/clingraph")
|
||
(commit (string-append "v" version))))
|
||
(file-name (git-file-name name version))
|
||
(sha256
|
||
(base32
|
||
"16q54rkwr84byzy27795rl9z08kcyxsg7lfk017yr8p5axh9a9rr"))))
|
||
(build-system pyproject-build-system)
|
||
(inputs (list dot2tex graphviz))
|
||
(propagated-inputs (list python-clingo
|
||
python-clorm
|
||
python-graphviz
|
||
python-imageio
|
||
python-jinja2
|
||
python-jsonschema
|
||
python-networkx))
|
||
(native-inputs (list dot2tex graphviz python-pylint python-pytest))
|
||
(home-page "https://github.com/potassco/clingraph")
|
||
(synopsis "Visualizer for graphs defined as logic programs")
|
||
(description
|
||
"This package provides a clingo-based visualizer for graphs defined
|
||
as logic programs.")
|
||
(license license:expat)))
|
||
|
||
(define-public python-clinguin
|
||
(package
|
||
(name "python-clinguin")
|
||
(version "1.0.0-beta")
|
||
(source (origin
|
||
(method git-fetch)
|
||
(uri (git-reference
|
||
(url "https://github.com/potassco/clinguin")
|
||
(commit (string-append "v" version))))
|
||
(file-name (git-file-name name version))
|
||
(sha256
|
||
(base32
|
||
"032fnzxv6wl01sdq7n2k0ikajpmkg8ihjh5mck1mwjvmis8z16d4"))
|
||
(modules '((guix build utils)))
|
||
(snippet
|
||
#~(begin
|
||
(substitute* "setup.cfg"
|
||
;; Fun fact of the day
|
||
;; some typo squatter hosted
|
||
;; a package named tk
|
||
(("tk") "")
|
||
(("typing") "typing;python_version<\"3.5\""))))))
|
||
(build-system pyproject-build-system)
|
||
(propagated-inputs
|
||
(list python-clingo
|
||
python-clorm
|
||
python-clingraph
|
||
python-fastapi
|
||
python-httpx
|
||
python-nbconvert
|
||
python-nbformat
|
||
python-nbsphinx
|
||
python-networkx
|
||
python-pillow
|
||
python-pydantic
|
||
`(,python "tk")
|
||
python-sphinx-rtd-theme
|
||
python-traitlets
|
||
python-uvicorn))
|
||
(home-page "https://github.com/potassco/clingraph")
|
||
(synopsis "Clingo-based interactive UI")
|
||
(description "Clinguin is a graphical user interface toolkit for clingo,
|
||
which allows user interfaces to be specified entirely as a logic program.")
|
||
(license license:expat)))
|