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Ricardo Wurmus 914bd41da9
gnu: r-fithic: Update to 1.18.0. 
* gnu/packages/bioconductor.scm (r-fithic): Update to 1.18.0.
2021-06-05 09:12:56 +02:00
..
aux-files
gnu: linux-libre: Update to 5.12.5.
2021-05-21 11:40:12 -04:00
patches
gnu: amule: Update to 2.3.3.
2021-06-03 18:23:39 +02:00
abduco.scm
…
abiword.scm
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accessibility.scm
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acct.scm
…
acl.scm
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ada.scm
…
admin.scm
gnu: isc-dhcp: Update home page.
2021-05-29 16:09:48 +02:00
adns.scm
…
agda.scm
…
aidc.scm
…
algebra.scm
gnu: giac: Update to 1.7.0-9.
2021-05-21 17:23:01 +02:00
android.scm
…
animation.scm
gnu: lightspark: Update to 0.8.4.1.
2021-05-27 18:20:35 +02:00
anthy.scm
…
antivirus.scm
…
apl.scm
…
apr.scm
…
arcan.scm
…
aspell.scm
gnu: ispell: Update to 3.4.03.
2021-06-02 15:40:03 +02:00
assembly.scm
…
astronomy.scm
gnu: gnuastro: Update to 0.15.
2021-05-31 09:44:47 +03:00
attr.scm
…
audio.scm
gnu: libopenmpt: Update to 0.5.9.
2021-05-27 18:20:35 +02:00
augeas.scm
…
authentication.scm
…
autogen.scm
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autotools.scm
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avahi.scm
…
avr.scm
…
axoloti.scm
gnu: axoloti-runtime: Patch firmware Makefile.
2021-05-30 14:51:04 +02:00
backup.scm
gnu: disarchive: Fix build when cross-compiling.
2021-05-17 23:27:40 -04:00
base.scm
…
bash.scm
…
batik.scm
…
bdw-gc.scm
…
benchmark.scm
gnu: intel-mpi-benchmarks: Remove top-level reference to 'openmpi'.
2021-05-28 11:36:02 +02:00
bioconductor.scm
gnu: r-fithic: Update to 1.18.0.
2021-06-05 09:12:56 +02:00
bioinformatics.scm
gnu: pigx-rnaseq: Update to 0.0.13.
2021-06-05 09:12:39 +02:00
bison.scm
…
bittorrent.scm
…
boost.scm
…
bootloaders.scm
…
bootstrap.scm
…
browser-extensions.scm
…
build-tools.scm
…
busybox.scm
…
c.scm
gnu: PackCC: Update to 1.5.0.
2021-05-18 22:23:48 +02:00
calcurse.scm
…
calendar.scm
…
ccache.scm
…
cdrom.scm
…
cedille.scm
…
certs.scm
…
check.scm
gnu: Fix erroneous uses of 'package/inherit'.
2021-05-23 17:49:56 +02:00
chemistry.scm
…
chez.scm
…
chicken.scm
…
chromium.scm
gnu: ungoogled-chromium: Update to 91.0.4472.77-0.6802c88.
2021-06-01 20:21:54 +02:00
ci.scm
gnu: ci: Use 'inputs' in build phases instead of '%build-inputs'.
2021-06-04 13:34:37 +02:00
cinnamon.scm
…
clojure.scm
…
cluster.scm
gnu: libraft: Update to 0.10.1
2021-05-28 11:36:03 +02:00
cmake.scm
…
cobol.scm
…
code.scm
gnu: universal-ctags: Update to 5.9.20210509.0.
2021-05-18 22:23:48 +02:00
commencement.scm
…
compression.scm
gnu: libjcat: Update to 0.1.8.
2021-05-29 16:09:49 +02:00
compton.scm
…
configuration-management.scm
…
conky.scm
…
connman.scm
…
convmv.scm
…
cook.scm
…
coq.scm
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cpio.scm
…
cpp.scm
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cppi.scm
…
cran.scm
gnu: Add r-arrow.
2021-06-05 09:12:39 +02:00
crates-graphics.scm
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crates-gtk.scm
…
crates-io.scm
gnu: rust-regex-1: Update to 1.5.4.
2021-06-03 14:24:35 +02:00
cross-base.scm
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crypto.scm
gnu: libolm: Update to 3.2.3.
2021-05-29 16:09:49 +02:00
cryptsetup.scm
gnu: cryptsetup: Rewrite synopsis & description.
2021-05-30 15:13:40 +02:00
cups.scm
…
curl.scm
gnu: curl: Update to 7.77.0 [fixes CVE-2021-{22897,22898,22901}].
2021-06-02 23:13:16 -04:00
cvassistant.scm
…
cybersecurity.scm
…
cyrus-sasl.scm
…
databases.scm
gnu: redis: Update to 6.2.4 [security fixes].
2021-06-02 00:54:39 -04:00
datamash.scm
…
datastructures.scm
…
dav.scm
…
dbm.scm
…
dc.scm
…
debian.scm
…
debug.scm
…
dejagnu.scm
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dhall.scm
…
dico.scm
…
dictionaries.scm
gnu: ding: Use 'inputs' in build phases instead of '%build-inputs'.
2021-06-04 13:34:54 +02:00
diffoscope.scm
gnu: diffoscope: Update to 175.
2021-05-23 22:39:14 +02:00
digest.scm
…
direct-connect.scm
…
disk.scm
gnu: hddtemp: Update to 0.4.3.
2021-05-23 22:39:13 +02:00
display-managers.scm
…
distributed.scm
…
django.scm
gnu: python-django@2.2: Update to 2.2.24 [fixes CVE-2021-33203, CVE-2021-33571].
2021-06-02 17:05:55 +02:00
djvu.scm
…
dlang.scm
gnu: Fix build for ldc.
2021-05-21 18:05:07 +02:00
dns.scm
gnu: unbound: Enable DoH support.
2021-06-01 20:21:54 +02:00
docbook.scm
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docker.scm
…
documentation.scm
gnu: asciidoc: Remove Python 2 variant.
2021-05-18 22:23:49 +02:00
drones.scm
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dunst.scm
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dvtm.scm
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easyrpg.scm
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ebook.scm
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ed.scm
…
education.scm
gnu: Add kanatest.
2021-05-25 12:11:18 +02:00
efi.scm
…
electronics.scm
…
elf.scm
…
elixir.scm
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elm.scm
…
emacs-xyz.scm
gnu: emacs-calibredb: Update to 2.10.0.
2021-06-03 21:13:23 +02:00
emacs.scm
gnu: emacs: Support console mice.
2021-05-29 16:09:48 +02:00
embedded.scm
gnu: fc-host-tools: Make installation path patcher more self-maintaining.
2021-05-18 15:55:12 +02:00
emulators.scm
gnu: retroarch: Update to 1.9.4.
2021-06-02 12:53:09 +02:00
enchant.scm
…
engineering.scm
gnu: kicad: Fix ngspice support.
2021-05-20 23:45:15 +02:00
enlightenment.scm
…
entr.scm
gnu: entr: Update to 4.9.
2021-05-27 14:41:04 -04:00
erlang.scm
…
esolangs.scm
…
fabric-management.scm
gnu: ucx: Restore (and adapt) ioctl fallback patch.
2021-05-22 16:04:59 +02:00
fcitx5.scm
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fcitx.scm
…
figlet.scm
…
file-systems.scm
gnu: Add udftools.
2021-06-02 15:40:03 +02:00
file.scm
…
finance.scm
gnu: monero-gui: Update to 0.17.2.2.
2021-05-15 12:04:31 +02:00
firmware.scm
…
flashing-tools.scm
…
flex.scm
…
fltk.scm
gnu: fltk: Update to 1.3.6.
2021-06-03 18:23:39 +02:00
fonts.scm
gnu: Remove font-ubuntu.
2021-06-03 08:29:04 +02:00
fontutils.scm
…
forth.scm
…
fpga.scm
gnu: nvc: Update to 1.5.1.
2021-05-23 21:56:21 +02:00
freedesktop.scm
…
freeipmi.scm
gnu: freeipmi: Update to 1.6.8.
2021-05-23 22:39:14 +02:00
fribidi.scm
…
ftp.scm
gnu: filezilla: Update to 3.54.1.
2021-05-23 21:56:20 +02:00
fvwm.scm
…
game-development.scm
gnu: ois: Update to 1.5.1.
2021-05-23 21:56:20 +02:00
games.scm
gnu: pioneer: Build with model files.
2021-06-02 21:38:32 +02:00
gawk.scm
…
gcal.scm
…
gcc.scm
gnu: gcc-9: Update to 9.4.0.
2021-06-01 20:54:06 +03:00
gd.scm
…
gdb.scm
…
genealogy.scm
…
genimage.scm
…
geo.scm
…
gettext.scm
…
ghostscript.scm
…
gimp.scm
…
gkrellm.scm
…
gl.scm
…
glib.scm
gnu: perl-net-dbus: Update to 1.2.0.
2021-05-19 22:40:13 +03:00
gnome-xyz.scm
…
gnome.scm
gnu: komikku: Update to 0.29.0.
2021-06-03 21:46:48 +02:00
gnu-doc.scm
…
gnu-pw-mgr.scm
…
gnucash.scm
gnu: aqbanking: Update to 6.3.0.
2021-05-26 15:08:00 -04:00
gnunet.scm
…
gnupg.scm
…
gnustep.scm
…
gnuzilla.scm
gnu: icecat: Update to 78.11.0-guix0-preview1 [fixes CVE-2021-29967].
2021-06-02 04:28:52 -04:00
gobby.scm
…
golang.scm
…
gperf.scm
…
gpodder.scm
…
gps.scm
…
graph.scm
gnu: Add python-graph-tool.
2021-05-15 19:18:46 +02:00
graphics.scm
gnu: autotrace: Prepare for GLib 2.68 and later.
2021-05-22 17:14:17 +02:00
graphviz.scm
gnu: Graphviz: Fix CVE-2020-18032.
2021-05-15 17:04:01 -04:00
groff.scm
…
groovy.scm
…
gsasl.scm
…
gstreamer.scm
…
gtk.scm
gnu: perl-cairo: Update to 1.109.
2021-05-18 23:07:46 +03:00
guile-wm.scm
…
guile-xyz.scm
gnu: Add guile-drmaa.
2021-05-29 23:14:25 +02:00
guile.scm
gnu: Fix erroneous uses of 'package/inherit'.
2021-05-23 17:49:56 +02:00
gv.scm
…
gxmessage.scm
…
hardware.scm
gnu: memtester: Update to 4.5.1.
2021-06-02 12:53:10 +02:00
haskell-apps.scm
…
haskell-check.scm
…
haskell-crypto.scm
…
haskell-web.scm
…
haskell-xyz.scm
…
haskell.scm
…
heads.scm
…
hexedit.scm
…
hugs.scm
…
hunspell.scm
…
hurd.scm
gnu: Remove unneeded import.
2021-05-17 23:59:58 +02:00
hyperledger.scm
…
i2p.scm
gnu: i2pd: Allow skipping tests.
2021-05-25 09:07:53 +03:00
ibus.scm
…
icu4c.scm
gnu: icu4c: Add 69.1.
2021-06-01 20:21:54 +02:00
idris.scm
…
idutils.scm
…
image-processing.scm
gnu: vtk: Wrap python modules.
2021-06-01 10:19:48 +01:00
image-viewers.scm
…
image.scm
gnu: libavif: Update to 0.9.1.
2021-06-02 12:53:09 +02:00
imagemagick.scm
…
inklingreader.scm
…
inkscape.scm
…
installers.scm
…
ipfs.scm
…
irc.scm
…
iso-codes.scm
…
jami.scm
gnu: jami-gnome: Include phases from the glib-or-gtk-build-system.
2021-05-28 09:48:15 -04:00
java-compression.scm
…
java-graphics.scm
…
java-maths.scm
…
java.scm
…
javascript.scm
…
jemalloc.scm
…
jose.scm
gnu: jose: Update to 11.
2021-05-18 16:37:22 +02:00
jrnl.scm
…
julia-jll.scm
gnu: Add julia-qt5base-jll.
2021-05-30 12:55:57 +03:00
julia-xyz.scm
gnu: Add julia-prettytables.
2021-05-31 12:54:49 +03:00
julia.scm
…
jupyter.scm
…
kawa.scm
…
kde-frameworks.scm
…
kde-internet.scm
…
kde-multimedia.scm
…
kde-pim.scm
…
kde-plasma.scm
…
kde-systemtools.scm
…
kde-utils.scm
…
kde.scm
…
kerberos.scm
…
key-mon.scm
…
kodi.scm
…
language.scm
…
ld-wrapper.in
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lean.scm
…
lego.scm
…
less.scm
…
lesstif.scm
…
libbsd.scm
…
libcanberra.scm
…
libdaemon.scm
…
libedit.scm
…
libevent.scm
…
libffcall.scm
…
libffi.scm
…
libftdi.scm
…
libidn.scm
…
libphidget.scm
…
libreoffice.scm
gnu: libetonyek: Update to 0.1.10.
2021-05-23 22:39:15 +02:00
libsigsegv.scm
…
libunistring.scm
…
libunwind.scm
…
libusb.scm
…
license.scm
…
lighting.scm
…
linphone.scm
…
linux.scm
gnu: linux-libre 4.4: Update to 4.4.271.
2021-06-03 22:41:01 -04:00
lirc.scm
…
lisp-xyz.scm
gnu: sbcl-nibbles: Update to 0.14-2.dad2524.
2021-06-04 10:59:50 +02:00
lisp.scm
gnu: sbcl: Update to 2.1.5.
2021-06-01 12:01:24 +02:00
llvm.scm
gnu: llvm-7: Update to 7.1.0.
2021-06-01 22:50:47 +03:00
logging.scm
…
logo.scm
…
loko.scm
…
lout.scm
…
lsof.scm
…
lua.scm
…
lxde.scm
…
lxqt.scm
gnu: Update lxqt home-page for all lxqt packages.
2021-05-29 20:16:51 +02:00
m4.scm
…
machine-learning.scm
…
magic-wormhole.scm
…
mail.scm
gnu: abook: Fix typo in description.
2021-05-23 22:39:13 +02:00
make-bootstrap.scm
…
man.scm
…
markup.scm
gnu: md4c: Update to 0.4.8.
2021-05-23 22:39:15 +02:00
marst.scm
…
mastodon.scm
…
mate.scm
…
maths.scm
gnu: Add frama-c.
2021-06-02 03:10:12 +02:00
matrix.scm
…
maven-parent-pom.scm
…
maven.scm
…
mc.scm
gnu: mc: Order inputs alphabetically.
2021-05-29 16:09:48 +02:00
mcrypt.scm
…
medical.scm
…
mercury.scm
…
mes.scm
gnu: nyacc: Update to 1.04.0.
2021-05-29 07:23:04 +02:00
messaging.scm
gnu: gajim-omemo: Update to 2.7.14.
2021-06-03 23:35:12 -04:00
microcom.scm
…
mingw.scm
…
moe.scm
…
monitoring.scm
gnu: hostscope: Add 'release-monitoring-url' property.
2021-05-28 23:04:44 +02:00
mono.scm
…
moreutils.scm
…
motti.scm
…
mp3.scm
…
mpd.scm
gnu: mpd: Update to 0.22.8.
2021-05-27 18:20:34 +02:00
mpi.scm
…
mtools.scm
gnu: mtools: Update to 4.0.29.
2021-06-03 18:23:38 +02:00
multiprecision.scm
…
music.scm
gnu: musescore: Add missing QML imports.
2021-06-01 18:52:48 +02:00
musl.scm
…
nano.scm
…
ncdu.scm
…
ncurses.scm
…
netpbm.scm
…
nettle.scm
…
networking.scm
gnu: amule: Use HTTPS home page.
2021-06-03 18:23:39 +02:00
nfs.scm
…
nickle.scm
…
nicotine.scm
…
nim.scm
…
ninja.scm
…
node-xyz.scm
…
node.scm
…
noweb.scm
…
nss.scm
…
ntp.scm
gnu: ntp: Prepare for GCC 10.
2021-05-22 16:04:58 +02:00
nutrition.scm
…
nvi.scm
…
ocaml.scm
…
ocr.scm
…
onc-rpc.scm
…
openbox.scm
…
opencl.scm
…
opencog.scm
…
openkinect.scm
…
openldap.scm
…
openpgp.scm
…
openstack.scm
…
orange.scm
…
orpheus.scm
…
ots.scm
…
package-management.scm
maint: Require Guile 3.0.
2021-06-01 23:26:07 +02:00
pantheon.scm
…
parallel.scm
gnu: xjobs: Add 'release-monitoring-url' property.
2021-05-28 23:04:44 +02:00
pascal.scm
…
password-utils.scm
…
patchutils.scm
…
pciutils.scm
…
pcre.scm
…
pdf.scm
…
pem.scm
…
pep.scm
gnu: java-pep-adapter 2.1.23.
2021-05-31 10:45:54 +02:00
perl6.scm
…
perl-check.scm
…
perl-compression.scm
gnu: perl-archive-extract: Update to 0.88.
2021-05-18 23:07:08 +03:00
perl-maths.scm
…
perl-web.scm
gnu: perl-mojolicious: Update to 9.17.
2021-05-19 22:49:33 +03:00
perl.scm
gnu: Add perl-bsd-resource.
2021-05-27 11:24:44 +02:00
phabricator.scm
…
photo.scm
…
php.scm
gnu: php: Update to 7.4.20.
2021-06-03 18:23:39 +02:00
piet.scm
…
pkg-config.scm
…
plotutils.scm
…
poedit.scm
…
polkit.scm
…
popt.scm
…
presentation.scm
…
pretty-print.scm
…
printers.scm
…
profiling.scm
…
prolog.scm
…
protobuf.scm
gnu: Fix erroneous uses of 'package/inherit'.
2021-05-23 17:49:56 +02:00
pth.scm
…
pulseaudio.scm
…
pumpio.scm
…
pure.scm
…
purescript.scm
…
pv.scm
…
python-build.scm
…
python-check.scm
gnu: Add python-tappy.
2021-05-17 22:55:33 -04:00
python-compression.scm
…
python-crypto.scm
…
python-science.scm
gnu: python-vedo: Make pkg-config a native input.
2021-06-02 10:27:59 +01:00
python-web.scm
gnu: Add python-google.
2021-05-31 09:21:45 +02:00
python-xyz.scm
gnu: python-anndata: Update to 0.7.6.
2021-06-04 23:51:24 +02:00
python.scm
gnu: net-snmp: Omit static library.
2021-05-30 11:53:00 +02:00
qt.scm
gnu: Add qcustomplot.
2021-05-19 08:55:51 +02:00
racket.scm
gnu: Break up import loop between (gnu packages racket) and (gnu packages chez).
2021-05-29 22:12:48 +02:00
radio.scm
gnu: wfview: Update to 1.0.
2021-06-04 13:50:52 +02:00
ragel.scm
…
rails.scm
…
raspberry-pi.scm
…
ratpoison.scm
…
rcm.scm
…
rdesktop.scm
…
rdf.scm
…
re2c.scm
gnu: re2c: Update to 2.1.1.
2021-05-15 23:17:33 +03:00
readline.scm
gnu: rlwrap: Fix single-quotation in Texinfo.
2021-05-30 11:52:59 +02:00
rednotebook.scm
…
regex.scm
…
robotics.scm
…
rpc.scm
…
rrdtool.scm
…
rsync.scm
gnu: Add rsync 3.2.3.
2021-05-25 16:32:52 -04:00
ruby.scm
…
rush.scm
…
rust-apps.scm
gnu: rust-cbindgen@0.17: Update to 0.19.0.
2021-06-01 17:59:34 +02:00
rust.scm
gnu: Add Rust 1.52.1.
2021-05-19 18:32:02 +02:00
sagemath.scm
…
samba.scm
…
sawfish.scm
…
scanner.scm
…
scheme.scm
…
screen.scm
…
scribus.scm
…
scsi.scm
…
sdl.scm
gnu: guile-sdl2: Update to 0.6.0.
2021-05-15 10:14:48 +02:00
search.scm
…
security-token.scm
gnu: yubikey-personalization: Fix build with GCC 10.
2021-05-18 22:23:48 +02:00
selinux.scm
…
sequoia.scm
gnu: pep-engine: Update to 2.1.34.
2021-05-31 10:45:53 +02:00
serialization.scm
…
serveez.scm
…
shells.scm
gnu: oil: Update to 0.8.11.
2021-05-29 17:29:36 +02:00
shellutils.scm
…
simh.scm
…
simulation.scm
…
skarnet.scm
…
skribilo.scm
…
slang.scm
…
smalltalk.scm
gnu: smalltalk: Find glibc even when cross-compiling.
2021-06-04 13:40:02 +02:00
sml.scm
…
speech.scm
…
sphinx.scm
gnu: python-sphinx-gallery: Update to 0.9.0.
2021-06-02 10:22:01 +03:00
spice.scm
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sqlite.scm
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squirrel.scm
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ssh.scm
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sssd.scm
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stalonetray.scm
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statistics.scm
gnu: r-with-tests: Use patched texlive-amsfonts.
2021-06-03 11:18:03 +02:00
stb.scm
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stenography.scm
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storage.scm
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suckless.scm
gnu: surf: Update to 2.1.
2021-05-24 01:28:19 +02:00
swig.scm
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sync.scm
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syncthing.scm
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syndication.scm
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synergy.scm
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task-management.scm
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task-runners.scm
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tbb.scm
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tcl.scm
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telegram.scm
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telephony.scm
gnu: osip: Update to 5.2.1.
2021-06-02 12:53:10 +02:00
terminals.scm
gnu: alacritty: Update to 0.7.2.
2021-05-14 21:08:07 +02:00
terraform.scm
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tex.scm
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texinfo.scm
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text-editors.scm
gnu: qemacs: Use 'native-inputs' instead of '%build-inputs'.
2021-06-04 13:34:49 +02:00
textutils.scm
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time.scm
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tls.scm
gnu: gnutls: Replace with 3.6.16 [fixes CVE-2021-20305].
2021-05-28 14:55:59 -04:00
tmux.scm
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tor.scm
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toys.scm
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tryton.scm
gnu: tryton: Allow disabling the test suite.
2021-05-28 11:36:03 +02:00
tv.scm
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uml.scm
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unicode.scm
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unrtf.scm
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upnp.scm
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usb-modeswitch.scm
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uucp.scm
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valgrind.scm
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version-control.scm
gnu: python-hg-evolve: Update to 10.3.1.
2021-06-02 10:36:12 +03:00
video.scm
gnu: openshot: Use free font.
2021-06-03 08:49:18 +02:00
vim.scm
gnu: neovim: Use 'inputs' in phases instead of '%build-inputs'.
2021-06-04 13:34:46 +02:00
virtualization.scm
gnu: python-libvirt: Update to 7.3.0.
2021-05-18 16:37:21 +02:00
visidata.scm
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vlang.scm
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vnc.scm
gnu: remmina: Update to 1.4.18.
2021-06-03 23:46:04 -04:00
vpn.scm
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vulkan.scm
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w3m.scm
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wdiff.scm
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web-browsers.scm
gnu: lagrange: Update to 1.5.0.
2021-05-31 21:06:36 +02:00
web.scm
gnu: monolith: Update to 2.5.0.
2021-06-03 14:24:35 +02:00
webkit.scm
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wget.scm
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wicd.scm
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wine.scm
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wireservice.scm
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wm.scm
gnu: asciidoc: Remove Python 2 variant.
2021-05-18 22:23:49 +02:00
wordnet.scm
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wv.scm
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wxwidgets.scm
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xdisorg.scm
gnu: net-snmp: Omit static library.
2021-05-30 11:53:00 +02:00
xfce.scm
gnu: xfce4-screenshooter: Update to 1.9.9.
2021-05-21 12:21:14 -04:00
xfig.scm
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xiph.scm
gnu: Use define-public in (gnu packages xiph).
2021-06-04 15:08:35 +02:00
xml.scm
gnu: expat: Replace with 2.4.1 [fixes CVE-2013-0340].
2021-06-02 17:07:15 -04:00
xnee.scm
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xorg.scm
gnu: libx11: Update replacement to 1.7.1 [fixes CVE-2021-31535].
2021-05-23 17:49:57 +02:00
zile.scm
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zwave.scm
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