05d469ab9d
* guix/build-system/julia.scm (link-depot): Accept julia-package-dependencies keyword and use it for 'julia-create-package-toml' function. (julia-create-package-toml): Use pattern matching. (julia-build): Add 'julia-pacakge-dependencies'. * guix/build/julia-build-system.scm (julia-build): Add '#:julia-package-dependencies' keyword. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
224 lines
9.4 KiB
Scheme
224 lines
9.4 KiB
Scheme
;;; GNU Guix --- Functional package management for GNU
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;;; Copyright © 2019, 2020 Nicolò Balzarotti <nicolo@nixo.xyz>
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;;; Copyright © 2021 Jean-Baptiste Volatier <jbv@pm.me>
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;;; Copyright © 2021, 2022 Simon Tournier <zimon.toutoune@gmail.com>
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;;; Copyright © 2022 Efraim Flashner <efraim@flashner.co.il>
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;;;
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;;; This file is part of GNU Guix.
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;;;
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;;; GNU Guix is free software; you can redistribute it and/or modify it
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;;; under the terms of the GNU General Public License as published by
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;;; the Free Software Foundation; either version 3 of the License, or (at
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;;; your option) any later version.
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;;;
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;;; GNU Guix is distributed in the hope that it will be useful, but
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;;; WITHOUT ANY WARRANTY; without even the implied warranty of
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;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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;;; GNU General Public License for more details.
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;;;
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;;; You should have received a copy of the GNU General Public License
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;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
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(define-module (guix build julia-build-system)
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#:use-module ((guix build gnu-build-system) #:prefix gnu:)
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#:use-module (guix build utils)
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#:use-module (rnrs io ports)
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#:use-module (ice-9 match)
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#:use-module (ice-9 regex)
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#:use-module (ice-9 rdelim)
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#:use-module (ice-9 popen)
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#:use-module (srfi srfi-1)
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#:export (%standard-phases
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julia-build))
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;; Commentary:
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;;
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;; Builder-side code of the standard build procedure for Julia packages.
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;;
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;; Code:
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(define (invoke-julia code)
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(invoke "julia" "-e" code))
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;; subpath where we store the package content
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(define %package-path "/share/julia/loadpath/")
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(define (project.toml->name file)
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"Look for Julia package name in the TOML file FILE (usually named
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Project.toml)."
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(call-with-input-file file
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(lambda (in)
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(let loop ((line (read-line in 'concat)))
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(if (eof-object? line)
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#f
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(let ((m (string-match "name\\s*=\\s*\"(.*)\"" line)))
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(if m (match:substring m 1)
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(loop (read-line in 'concat)))))))))
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(define (project.toml->uuid file)
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"Look for Julia package uuid in the TOML file FILE (usually named
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Project.toml)."
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(call-with-input-file file
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(lambda (in)
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(let loop ((line (read-line in 'concat)))
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(if (eof-object? line)
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#f
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(let ((m (string-match "uuid\\s*=\\s*\"(.*)\"" line)))
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(if m (match:substring m 1)
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(loop (read-line in 'concat)))))))))
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(define* (install #:key source inputs outputs julia-package-name
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#:allow-other-keys)
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(let* ((out (assoc-ref outputs "out"))
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(package-dir (string-append out %package-path
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(or
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julia-package-name
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(project.toml->name "Project.toml")))))
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(mkdir-p package-dir)
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(copy-recursively (getcwd) package-dir)))
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(define* (precompile #:key source inputs outputs julia-package-name
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#:allow-other-keys)
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(let* ((out (assoc-ref outputs "out"))
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(builddir (string-append out "/share/julia/"))
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(package (or julia-package-name (project.toml->name "Project.toml"))))
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(mkdir-p builddir)
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;; With a patch, SOURCE_DATE_EPOCH is honored
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(setenv "SOURCE_DATE_EPOCH" "1")
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(setenv "JULIA_DEPOT_PATH" builddir)
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;; Add new package dir to the load path.
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(setenv "JULIA_LOAD_PATH"
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(string-append builddir "loadpath/" ":"
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(or (getenv "JULIA_LOAD_PATH")
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"")))
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;; Actual precompilation:
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(invoke-julia
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;; When using Julia as a user, Julia writes precompile cache to the first
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;; entry of the DEPOT_PATH list (by default, the home dir). We want to
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;; write it to the store, so let's push the store path as the first
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;; element of DEPOT_PATH. Once the cache file exists, this hack is not
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;; needed anymore (like in the check phase). If the user install new
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;; packages, those will be installed and precompiled in the home dir.
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(string-append "pushfirst!(DEPOT_PATH, pop!(DEPOT_PATH)); using "
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package))))
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(define* (check #:key tests? source inputs outputs julia-package-name
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parallel-tests? #:allow-other-keys)
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(when tests?
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(let* ((out (assoc-ref outputs "out"))
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(package (or julia-package-name (project.toml->name "Project.toml")))
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(builddir (string-append out "/share/julia/"))
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(job-count (if parallel-tests?
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(parallel-job-count)
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1))
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;; The --proc argument of Julia *adds* extra processors rather than
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;; specify the exact count to use, so zero must be specified to
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;; disable parallel processing...
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(additional-procs (max 0 (1- job-count))))
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;; With a patch, SOURCE_DATE_EPOCH is honored
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(setenv "SOURCE_DATE_EPOCH" "1")
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(setenv "JULIA_DEPOT_PATH" builddir)
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(setenv "JULIA_LOAD_PATH"
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(string-append builddir "loadpath/" ":"
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(or (getenv "JULIA_LOAD_PATH")
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"")))
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(setenv "JULIA_CPU_THREADS" (number->string job-count))
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(setenv "HOME" "/tmp")
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(apply invoke "julia"
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`("--depwarn=yes"
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,@(if parallel-tests?
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;; XXX: ... but '--procs' doesn't accept 0 as a valid
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;; value, so just omit the argument entirely.
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(list (string-append "--procs="
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(number->string additional-procs)))
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'())
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,(string-append builddir "loadpath/"
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package "/test/runtests.jl"))))))
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(define* (link-depot #:key source inputs outputs
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julia-package-name julia-package-uuid
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julia-package-dependencies #:allow-other-keys)
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(let* ((out (assoc-ref outputs "out"))
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(name+version (strip-store-file-name out))
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(version (last (string-split name+version #\-)))
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(package-name (or
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julia-package-name
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(project.toml->name "Project.toml")))
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(package-dir (string-append out %package-path package-name))
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(uuid (or julia-package-uuid (project.toml->uuid "Project.toml")))
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(pipe (open-pipe* OPEN_READ "julia" "-e"
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(format #f "using Pkg;
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println(Base.version_slug(Base.UUID(\"~a\"),
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Base.SHA1(Pkg.GitTools.tree_hash(\".\"))))" uuid)))
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(slug (string-trim-right (get-string-all pipe))))
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;; Few packages do not have the regular Project.toml file, then when they
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;; are propagated, dependencies do not find them and an raise error.
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(unless (file-exists? "Project.toml")
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(julia-create-package-toml (getcwd)
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julia-package-name julia-package-uuid
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version
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julia-package-dependencies
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#:file "Project.toml"))
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;; When installing a package, julia looks first at in the JULIA_DEPOT_PATH
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;; for a path like packages/PACKAGE/XXXX
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;; Where XXXX is a slug encoding the package UUID and SHA1 of the files
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;; Here we create a link with the correct path to enable julia to find the
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;; package
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(mkdir-p (string-append out "/share/julia/packages/" package-name))
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(symlink package-dir (string-append out "/share/julia/packages/"
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package-name "/" slug))))
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(define* (julia-create-package-toml location
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name uuid version
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#:optional
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(deps '())
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#:key
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(file "Project.toml"))
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"Some packages are not using the new Project.toml dependency specifications.
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Write this FILE manually, so that Julia can find its dependencies."
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(let ((f (open-file
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(string-append location "/" file)
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"w")))
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(display (string-append
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"
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name = \"" name "\"
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uuid = \"" uuid "\"
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version = \"" version "\"
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") f)
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(when (not (null? deps))
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(display "[deps]\n" f)
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(for-each (match-lambda
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((name . uuid)
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(display (string-append name " = \"" uuid "\"\n")
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f)))
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deps))
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(close-port f)))
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(define %standard-phases
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(modify-phases gnu:%standard-phases
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(delete 'check) ; tests must be run after installation
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(replace 'install install)
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(add-after 'install 'precompile precompile)
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(add-after 'unpack 'link-depot link-depot)
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(add-after 'install 'check check)
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;; TODO: In the future we could add a "system-image-generation" phase
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;; where we use PackageCompiler.jl to speed up package loading times
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(delete 'configure)
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(delete 'bootstrap)
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(delete 'patch-usr-bin-file)
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(delete 'build)))
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(define* (julia-build #:key inputs julia-package-name julia-package-uuid
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julia-package-dependencies
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(phases %standard-phases)
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#:allow-other-keys #:rest args)
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"Build the given Julia package, applying all of PHASES in order."
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(apply gnu:gnu-build
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#:inputs inputs #:phases phases
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#:julia-package-name julia-package-name
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#:julia-package-uuid julia-package-uuid
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#:julia-package-dependencies julia-package-dependencies
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args))
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