* gnu/packages/python-xyz.scm (python-matplotlib): Update to 3.5.2.
[propagated-inputs]: Move after 'arguments' field. Use new style and re-order.
[inputs]: Order lexicographically.
[native-inputs]: Use new style.
[phases]{fix-and-disable-failing-tests}: Fix indentation.
Delete the 'lib/matplotlib/tests/test_animation.py' test.
{check}: Skip the test_lazy_auto_backend_selection test.
Renaming rationale: pudb can also be used as a Python library (like pdb).
* gnu/packages/python-xyz.scm (python-pudb): Update to 2022.1.1.
[phases]{check}: Remove obsolete 'add-installed-pythonpath' call. Invoke
pytest verbosely.
[native-inputs]: Remove python-numpy.
[propagated-inputs]: Apply guix style.
(pudb): Define as a deprecated alias to python-pudb.
* gnu/packages/python-xyz.scm (python-numpy-documentation): Relocate next to
the python-numpy package in the module. Inherit from python-numpy.
[version, source, build-system, home-page, license]: Remove fields, now
inherited.
[phases]{add-gnu-freefont-to-texmf}: New phase.
{install}: Patch conf.py to allow building the info manual. Set HOME. Copy
the whole generated HTML directory. Parallelize documentation build.
[native-inputs]: Use new style. Add font-gnu-freefont, fontconfig,
python-breathe, python-ipython, python-pandas, python-pydata-sphinx-theme,
python-scipy, python-sphinx-panels, texlive-bin, texlive-cbfonts,
texlive-cm-super, texlive-greek-fontenc, texlive-latex-expdlist,
texlive-polyglossia and texlive-xindy. Remove pkg-config, the previous "texlive"
updmap.cfg package, scipy-sphinx-theme, and do not inherit the native inputs
of python-numpy.
[synopsis]: Refine.
[description]: Expound a bit.
* gnu/packages/python-xyz.scm (python-cantools): Update to 37.0.7.
[arguments]: Use gexps.
[phases]: Strip trailing #t.
{build-doc}: Use make -C instead of with-directory-excursion.
{install-doc}: Adjust for gexp.
[native-inputs]: Use new style.
[propagated-inputs]: Add python-argparse-addons, python-crccheck,
python-matplotlib and python-parameterized.
* gnu/packages/python-xyz.scm (python-parse-type): Update to 0.6.0.
[arguments]: New field.
[native-inputs]: Remove python-pytest-runner and python-setuptools.
* gnu/packages/python-xyz.scm (python-numpy): Update to 1.21.6. Move inputs
and native-inputs fields after arguments. Use gexps.
[modules]: New argument.
[phases]{parallelize-build}: New phase.
{configure-blas}: Format via (ice-9 format).
{fix-executable-paths}: Use search-file-input. Remove obsolete system_info.py
substitution.
{check}: Remove extraneous add-installed-pythonpath and setenv calls. Provide
the '-n' pytest-xdist option.
[native-inputs]: Use python-hypothesis-next.
(python-numpy-next): Inherit from python-numpy.
(python2-numpy): Adjust for gexps.
[phases]{delete-failing-test}: Rename to...
{delete-failing-tests}: ... this.
(python2-numpy-1.8): Likewise, and delete 'delete-failing-tests' phase.
Disable tests.
[native-inputs]: Define as the empty list.
* gnu/packages/python-xyz.scm (python-nbconvert): Update to 6.5.0.
[arguments]: Use gexps.
[phases]{fix-paths-and-tests}: Rename to...
{fix-paths}: ... this. Find inputs via search-input-file. Patch inskcape
file name. Disable tests in...
{check}: ... this phase instead. Do not set HOME. Execute installed test
suite. Run tests in parallel. Disable and not
test_execute_widgets_from_nbconvert and test_execute_multiple_notebooks tests.
[inputs]: Add inkscape.
[native-inputs]: Delete python-pytest-cov and python-pytest-dependency. Use
new style.
[propagated-inputs]: Add python-beautifulsoup4. Reduce the texlive packages
part of the generated updmap.cfg input, moving them to regular propagated
inputs. Add texlive-unicode-math and texlive-lm-math.
* gnu/packages/python-xyz.scm (python-ipyparallel-bootstrap): Update to 8.2.1.
[propagated-inputs]: Add python-entrypoints, python-psutil and python-tqdm.
Update python-tornado to version 6.
(python-ipyparallel)[phases]{check}: Override phase.
[native-inputs]: Remove python-mock and python-nose. Add
python-pytest-asyncio and python-pytest-tornado.
