4643 Commits

Author SHA1 Message Date
Danny Milosavljevic
1e44ae6fe7
lint: Check for more packages which should be native.
* guix/lint.scm (check-inputs-should-be-native): Add gtk-doc.
2020-01-12 23:21:59 +01:00
Guillaume Le Vaillant
6b8f7c397a
build: asdf-build-system: Improve reproducibility.
* guix/build/asdf-build-system.scm (copy-files-to-output): Reset timestamps of
  source files before compiling.
2020-01-12 14:48:30 +01:00
Ludovic Courtès
6e36f1cabd
deprecation: Add a two-element form for simple aliases.
* guix/deprecation.scm (define-deprecated): Add a two-element form for
simple aliases: (define-deprecated old new).
2020-01-12 00:19:09 +01:00
Ludovic Courtès
f75243e17e
channels: Provide a hint when the 'guix' channel is lacking.
Fixes <https://bugs.gnu.org/39043>.
Reported by Jesse Gibbons <jgibbons2357@gmail.com>.

* guix/channels.scm (channel-instance-derivations): Raise '&fix-hint'
condition in addition to the '&message' condition.
2020-01-09 23:33:04 +01:00
Danny Milosavljevic
bbd9063afc
lint: Check for more packages which should be native.
* guix/lint.scm (check-inputs-should-be-native): Add autoconf, automake,
bison, dejagnu, desktop-file-utils, doxygen, flex, gettext,
gobject-introspection, googletest-source, groff, help2man, libtool, swig,
qmake, qttools, texinfo, xorg-server-for-tests, yelp-tools.
2020-01-09 23:15:04 +01:00
Ludovic Courtès
984efa2b6a
build-system/clojure: Provide only the right modules in scope.
Previously, we used to have a whole bunch of (guix build *-build-system)
modules in scope, which, for example, meant that '%standard-phases' was
clashing.  This change clarifies it.

* guix/build-system/clojure.scm (%default-modules): New variable.
(clojure-build): Change the default value of #:modules and that of
 #:phases.
2020-01-08 23:21:14 +01:00
Guillaume Le Vaillant
f98c050c20
build: asdf-build-system: Make sbcl-* Lisp packages reproducible.
The '*.fasl' files produced by SBCL contain the mtime of the source file (see
commit 72843d7ce32bd615f64a0326cf891658b5724ead of SBCL's code repository).
As asdf-build-system makes a copy of the source files before compiling them,
we must set the mtime of these copies to the same date as the originals for
the build to be reproducible.

* guix/build/asdf-build-system.scm (copy-files-to-output): Keep the
  modification time of the original source files.
2020-01-08 15:39:05 +01:00
Ludovic Courtès
058d0251bd
download, git: Refer to the right module in 'module-use!' call.
This fixes a regression introduced in
6a7c4636d4dec47eefa03c95da5a1315bd0e0413.

* guix/build/download.scm (load-gnutls): Call 'resolve-module' instead
of 'current-module'.
* guix/git.scm (load-git-submodules): Likewise.
2020-01-07 12:25:09 +01:00
Ludovic Courtès
7a0836cffd
More module autoload changes.
This is a followup to 6a7c4636d4dec47eefa03c95da5a1315bd0e0413.

* guix/scripts/build.scm: Adjust #:autoload clauses.
* guix/scripts/gc.scm: Likewise.
2020-01-07 12:25:09 +01:00
Ludovic Courtès
6a7c4636d4
Adjust module autoloads.
In Guile < 2.9.7, autoloading a module would give you access to all its
bindings.  In future versions, autoloading a module gives access only to
the listed bindings, as per #:select (see <https://bugs.gnu.org/38895>).

This commit adjusts autoloads to the new semantics, allowing Guix to be
built with Guile 2.9.7/2.9.8.

* guix/build/download.scm <top level>: Remove call to 'module-autoload!'.
(load-gnutls): New procedure.
(tls-wrap): Call it.
* guix/git.scm <top level>: Remove call to 'module-autoload!'.
(load-git-submodules): New procedure.
(update-submodules): Call it instead of 'resolve-interface'.
* gnu/bootloader/grub.scm: Replace #:autoload with #:use-module.
* gnu/packages.scm: Likewise.
* gnu/packages/ssh.scm: Likewise.
* gnu/packages/tex.scm: Likewise.
* gnu/services/cuirass.scm: Likewise.
* gnu/services/mcron.scm: Likewise.
* guix/lint.scm: Augment list of bindings in #:autoload.
* guix/scripts/build.scm: Likewise.
* guix/scripts/gc.scm: Likewise.
* guix/scripts/pack.scm: Likewise.
* guix/scripts/publish.scm: Likewise.
* guix/scripts/pull.scm: Likewise.
* guix/utils.scm: Remove unnecessary #:autoload clauses; replace one
of them with #:use-module.
2020-01-06 16:31:54 +01:00
Ludovic Courtès
d63ee94d63
gexp: Add 'raw-derivation-file'.
* guix/gexp.scm (<raw-derivation-file>): New record type.
(raw-derivation-file-compiler): New gexp compiler.
* tests/gexp.scm ("lower-gexp, raw-derivation-file")
("raw-derivation-file"): New tests.
2020-01-04 23:44:26 +01:00
Jan Nieuwenhuizen
f851fd6b2b
build-system/guile: Add #:implicit-inputs?.
* guix/build-system/guile.scm (lower): Add implicit-inputs? keyword
parameter.
[private-keywords]: Add it.
Honor it.
2020-01-04 23:44:25 +01:00
Ludovic Courtès
af0aefd8c1
import: cran: Fix file descriptor leak.
Fixes <https://bugs.gnu.org/38836>.
Reported by Ricardo Wurmus <rekado@elephly.net>.

* guix/import/cran.scm (bioconductor-packages-list): Close the port
returned by 'http-fetch/cached'.
(fetch-description): Likewise.
2020-01-03 16:06:26 +01:00
Ludovic Courtès
f4cde9ac4a
download: Do not leak file descriptors on TLS ports.
Fixes <https://bugs.gnu.org/20145>.

* guix/build/download.scm (%tls-ports, register-tls-record-port): Remove.
(tls-wrap): Remove call to 'register-tls-record-port'.  Return a custom
binary input/output port instead.  This is a backport of what Guile
2.2's (web client) module has been doing.
(close-connection): Define as an alias for 'close-port'.
* guix/http-client.scm (http-fetch): Remove #:keep-alive? parameter,
which was ignored and unused.
Pass #:keep-alive? #f to 'http-get'.
* guix/lint.scm (probe-uri): Use 'close-port' instead of 'close-connection'.
* guix/scripts/substitute.scm (http-multiple-get): Likewise.
2020-01-03 16:06:26 +01:00
Ludovic Courtès
52207b3938
gexp: 'gexp->script' marks its result as non-offloadable and non-substitutable.
* guix/gexp.scm (gexp->script): Pass #:local-build? and #:substitutable?
to 'gexp->derivation'.
2020-01-03 16:06:26 +01:00
Pierre Neidhardt
ba42da245b
gnu: uglify-js: Move back next to sbcl-cl-uglify-js definition.
This fixes the bug which prevented uglify-js from being defined properly, and
cascaded back to all Common Lisp packages.

* gnu/packages/bioinformatics.scm: Replace javascript module with lisp-xyz.
* gnu/packages/cran.scm: Use lisp-xyz module.
* gnu/packages/javascript.scm (uglify-js): Move from here...
* gnu/packages/lisp-xyz.scm: ... To here.
* gnu/packages/web.scm: Replace javascript module with lisp-xyz.
* guix/build-system/minify.scm: Find uglify-js in the lisp-xyz module.
2020-01-03 15:03:36 +01:00
Ludovic Courtès
09edf136ef
ui: It's 2020 now!
* guix/ui.scm (show-version-and-exit): Change year to 2020.
2020-01-02 19:42:59 +01:00
Ludovic Courtès
c7ca707b59
import: crate: Honor crate version for recursive imports.
Fixes <https://bugs.gnu.org/38709>.
Reported by Valentin Ignatev <valentignatev@gmail.com>.

* guix/import/crate.scm (crate-recursive-import): Add optional 'version'
parameter and honor it.
* guix/scripts/import/crate.scm (guix-import-crate): Pass VERSION as 2nd
argument to 'crate-recursive-import'.
2019-12-30 23:18:16 +01:00
Mathieu Othacehe
e51de34309
profiles: Fix profile-derivation cross-compilation.
* guix/store.scm (current-target-system): New exported monadic procedure.
* guix/profiles.scm (profile-derivation): Set target at bind time using the
above procedure.
2019-12-29 21:26:11 +01:00
Ludovic Courtès
7a241c6350
inferior: Add 'inferior-package-provenance'.
* guix/inferior.scm (inferior-package-provenance): New procedure.
2019-12-29 18:24:54 +01:00
Ludovic Courtès
975183a1c4
pack: Save provenance information when using '--manifest'.
* guix/scripts/pack.scm (guix-pack)[manifest-from-args]: Remove
'provenance', and add 'with-provenance' procedure.  Wrap 'cond' form in
'with-provenance'.
2019-12-29 18:24:54 +01:00
Ludovic Courtès
c48e522fdb
guix package: Save provenance information when using '--manifest'.
Fixes <https://bugs.gnu.org/38673>.
Reported by zimoun <zimon.toutoune@gmail.com>.

* guix/describe.scm (manifest-entry-with-provenance): New procedure.
* guix/scripts/package.scm (process-actions): Use it when FILES is
non-empty.
2019-12-29 18:24:54 +01:00
Ludovic Courtès
8a705ae4c6
profiles: Add 'map-manifest-entries'.
* guix/scripts/pack.scm (map-manifest-entries): Move to...
* guix/profiles.scm (map-manifest-entries): ... here.
2019-12-29 18:24:54 +01:00
Leo Prikler
9ce3f7f6dc
guix: emacs-utils: Add emacs-batch-disable-compilation.
* guix/build/emacs-utils.scm (emacs-batch-disable-compilation):
New procedure.

Signed-off-by: Brett Gilio <brettg@gnu.org>
2019-12-27 16:54:52 -06:00
Ludovic Courtès
785af04a75
git: 'commit-difference' takes a list of excluded commits.
* guix/git.scm (commit-closure): Add 'visited' optional parameter.
(commit-difference): Add 'excluded' optional parameter; pass second
argument to 'commit-closure'.
* tests/git.scm ("commit-difference, excluded commits"): New test.
2019-12-27 13:52:49 +01:00
Marius Bakke
621fb83a1f
download: Enable TLS 1.3.
This reverts commit e4ee84202633636b4c8cef4a332f0c74912a3b23.

* guix/build/download.scm (tls-wrap): Dot not disable TLS 1.3.
2019-12-26 14:29:43 +01:00
Ricardo Wurmus
3c45b53ec9
gnu: Remove squashfs-tools-next.
* gnu/packages/compression.scm (squashfs-tools-next): Remove variable.
* guix/scripts/pack.scm (squashfs-image, guix-pack): Use squashfs-tools.
* tests/pack.scm: Use squashfs-tools.
2019-12-26 12:29:44 +01:00
Efraim Flashner
87a028100c
build-system: linux-module: Add substitutable keyword.
* guix/build-system/linux-module.scm (linux-module-build) Add
substitutable keyword.
2019-12-26 10:41:22 +02:00
Björn Höfling
e507d30c48
guix: swh: Fix again example URI in comment for <origin>.
This is a follow up to
6afea7489b76c8db58d4f389fdbedc7c2b8992bd

* guix/swh.scm(<origin>): Write 'https' instead of 'ttps' for the URL.
2019-12-26 00:19:39 +01:00
Hartmut Goebel
c19260ea00
build-system: qt: Adjust indentation.
* guix/build-system/qt.scm (qt-build, qt-cross-build): Adjust indentation.
2019-12-23 15:48:21 +01:00
Hartmut Goebel
fce8ec9e15
build-system: qt: Actually use qt-build-system, not cmake-build-system.
When the qt-build-system was created, based on the cmake-build-system,
some references to cmake have been missed to be changed.

* guix/build-system/qt.scm (qt-build, qt-cross-build)[modules]:
  Use qt-build-system, not cmake-build-system. [builder]: Call qt-build,
  not cmake-build.

Coauthored-by: Ludovic Courtès <ludo@gnu.org>
2019-12-23 15:43:08 +01:00
Mathieu Othacehe
7e0539649c
gexp: Add system and target support to gexp->file.
* guix/gexp.scm (gexp->file): Add system and target arguments and pass them to
gexp->derivation and load-path-expression calls,
(scheme-file-compiler): adapt accordingly to pass system and target arguments.
2019-12-22 10:04:04 +01:00
Ludovic Courtès
89bbcc80d7
guix system: Honor the build options in 'delete-generations'.
Until now, 'guix system delete-generations' would ignore OPTS; for
example, it would not enable #:print-extended-build-trace? & co.,
leading to suboptimal output.

* guix/scripts/system.scm (process-command)[with-store*]: New macro.
Use it for 'delete-generations', 'switch-generation', and 'roll-back'.
2019-12-21 23:55:24 +01:00
Ludovic Courtès
f94f9d67e6
gnupg: 'gnupg-verify*' returns a status symbol.
This allows callers to distinguish between signature verification
failure and missing key.

* guix/gnupg.scm (gnupg-receive-keys): Return true on success.
(gnupg-verify*): Check return value of 'gnupg-receive-keys'.  Return two
values, the first one being a symbol.
* guix/upstream.scm (download-tarball): Get the two return values of
'gnupg-verify*', and match on the first one.
* gnu/packages/bash.scm (download-patches): Check the first return value
of 'gnupg-verify*'.
2019-12-20 22:06:05 +01:00
Ludovic Courtès
d8169d05bb
gnupg: Compile regexps only once.
This halves the run time on a large number of subsequent 'gnupg-verify'
calls.

* guix/gnupg.scm (sigid-rx, goodsig-rx, validsig-rx, expkeysig-rx)
(errsig-rx): New variables, lifted from...
(gnupg-verify)[status-line->sexp]: ... here.
2019-12-19 23:48:02 +01:00
Efraim Flashner
003fcf23d9
guix: Fix %hurd-systems list.
* guix/packages.scm (%hurd-systems): Replace i585-gnu with i586-gnu.
2019-12-19 10:37:20 +02:00
Mark H Weaver
09f9167cd4
download: Remove ramses.wh2.tu-dresden.de kernel mirror.
* guix/download.scm (%mirrors): Remove ramses.wh2.tu-dresden.de, which seems
to no longer work.
2019-12-18 23:07:38 -05:00
Ludovic Courtès
217b4a1587
gnupg: 'gnupg-status-missing-key?' returns a fingerprint when possible.
Until then, 'gnupg-status-missing-key?' would return a key id.  Its
user, 'gnupg-verify*', would then fetch a key with that ID from key
servers, thus possibly the wrong key (due to key ID collisions).  If it
did fetch the wrong key, the effect would be a signature verification
failure down the path--e.g., in "guix refresh -u".

* guix/gnupg.scm (gnupg-verify)[maybe-fingerprint]: New procedure.
[status-line->sexp](errsig-rx): Add parenthetical expression at the end.
Fetch it and add it to the 'signature-error' sexp.
(gnupg-status-missing-key?): Match the whole 'signature-error' sexp and
return preferably the fingerprint rather than KEY-ID.
(gnupg-receive-keys): Rename 'key-id' parameter to 'fingerprint/key-id'.
2019-12-18 23:48:12 +01:00
Ludovic Courtès
9cfa322579
gnupg: 'gnupg-status-good-signature?' no longer returns a key ID.
Returning a key ID was inconsequential because the only user of
'gnupg-status-good-signature?', (guix upstream) (via 'gnupg-verify*'),
would not check the return value as long as it's true.

* guix/gnupg.scm (gnupg-status-good-signature?): Return a
fingerprint/user pair instead of key-id/user.
(gnupg-verify*): Mention it in docstring.
2019-12-18 23:48:12 +01:00
Björn Höfling
6afea7489b
guix: swh: Fix example URI in comment for <origin>.
This is a one-character follow-up to
356a79becc4061d158c68718ad169abac1ab672f

Reported by Jonathan Brielmaier <jonathan.brielmaier@web.de>.

* guix/swh.scm(<origin>): Remove a slash from example URI witin a comment.
2019-12-18 22:39:28 +01:00
Marius Bakke
ab7010af1f
gexp: Allow character literals in GEXP->SEXP.
Fixes <https://bugs.gnu.org/38628>.

* tests/gexp.scm ("lower-gexp, character literal"): New test.
* guix/gexp.scm (gexp->sexp)[self-quoting?]: Add CHAR? to the tested types.
* guix/repl.scm (self-quoting?): Likewise.
* gnu/tests.scm (marionette-shepherd-service)[self-quoting?]: Likewise.
2019-12-18 22:36:37 +01:00
Björn Höfling
356a79becc
swh: Fix API call for getting origin.
When using the archival linter, git origins already in the archive where
not recognized due to an API change and where repeatedly asked for archival.
This is fixed here.

* guix/swh.scm (lookup-origin): Fix API URI for getting origin.
(<origin>): Fix comment with API URI example.
2019-12-17 23:29:32 +01:00
Ricardo Wurmus
f431d5e299
guix: Upgrade to Bioconductor 3.10.
* guix/build-system/r.scm (bioconductor-uri): Switch to version 3.10.
* guix/import/cran.scm (%bioconductor-version): Same.
2019-12-15 15:38:51 +01:00
Ludovic Courtès
5f9cd63eb0
base64: Do not use (rnrs).
* guix/base64.scm: Remove #:use-module clauses for (rnrs) and (srfi
srfi-13).  Add other #:use-module clauses.
(fxbit-field): Define as an alias for 'bit-field.
(fx=?, fx+, mod): New aliases.
(assert): New macro.
2019-12-15 00:34:05 +01:00
Ludovic Courtès
428561aa63
challenge: Fix type mismatch when comparing to a local hash.
* guix/scripts/challenge.scm (call-with-mismatches)[narinfo1]: When
LOCAL-HASH is true, call 'narinfo-hash->sha256' and use 'bytevector=?'
instead of 'string=?'.
2019-12-15 00:34:05 +01:00
Ricardo Wurmus
e31ec53ed8
import: cran: Recognize LGPL 2.1+.
* guix/import/cran.scm (string->license): Add case for lgpl2.1+.
2019-12-14 13:35:58 +01:00
Ludovic Courtès
6212146f88
import: utils: Update docstring of 'recursive-import'.
This is a followup to 70a8e13277d4a44b89dd9ee2290b98105f0235f1.

* guix/import/utils.scm (recursive-import): Update docstring.
2019-12-13 18:04:04 +01:00
Maxim Cournoyer
e34e02707d
emacs-build-system: Ensure the core libraries appear last in the load path.
Fixes bug #38568 (see: https://bugs.gnu.org/38568).

* guix/build/emacs-build-system.scm (add-source-to-load-path): Ensure the core
libraries appear last in the load path.

Reported-by: Jelle Licht <jlicht@fsfe.org>
2019-12-13 10:48:28 +09:00
Ludovic Courtès
828a39da68
challenge: Support "--diff=diffoscope".
* guix/scripts/challenge.scm (call-with-nar): New procedure.
(narinfo-contents): Express in terms of 'call-with-nar'.
(call-with-mismatches, report-differing-files/external): New
procedures.
(%diffoscope-command): New variable.
(%options): Support "diffoscope" and a string starting with "/".
* tests/challenge.scm (call-mismatch-test): New procedure.
("differing-files"): Rewrite in terms of 'call-mismatch-test'.
("call-with-mismatches"): New test.
* doc/guix.texi (Invoking guix challenge): Document it.
2019-12-12 17:56:58 +01:00
Ludovic Courtès
5208db3a52
challenge: Add "--diff".
* guix/scripts/challenge.scm (dump-port*): New variable.
(archive-contents, store-item-contents, narinfo-contents)
(differing-files, report-differing-files): New procedures.
(summarize-report): Add #:report-differences and call it.
(show-help, %options): Add "--diff".
(%default-options): Add 'difference-report' key.
(report-differing-files): Parameterize CURRENT-TERMINAL-COLUMNS and pass
 #:report-differences to 'summarize-report'.
* guix/tests/http.scm (%local-url): Add optional argument.
(call-with-http-server): Fix docstring typo.
* tests/challenge.scm (query-path-size, make-narinfo): New procedures.
("differing-files"): New test.
* doc/guix.texi (Invoking guix challenge): Document "--diff".
2019-12-12 17:56:58 +01:00