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110885 Commits

Author SHA1 Message Date
Liliana Marie Prikler
b4c907adb4
gnu: webkitgtk: Update to 2.42.1. 
* gnu/packages/webkit.scm (webkitgtk): Update to 2.42.1.
[inputs]: Add libjxl.
 2023-10-21 21:52:32 +02:00
Liliana Marie Prikler
14ea0a7ee9
gnu: gnome-bluetooth: Update to 42.6. 
* gnu/packages/gnome.scm (gnome-bluetooth): Update to 42.6.
 2023-10-21 21:52:32 +02:00
Liliana Marie Prikler
cc84687312
gnu: bluefish: Update to 2.2.14. 
* gnu/packages/gnome.scm (bluefish): Update to 2.2.14.
 2023-10-21 21:52:32 +02:00
Liliana Marie Prikler
aadfe59209
gnu: gspell: Update to 1.12.2. 
* gnu/packages/gnome.scm (gspell): Update to 1.12.2.
 2023-10-21 21:52:32 +02:00
Liliana Marie Prikler
3b5961c8df
gnu: tracker-miners: Update to 3.6.1. 
* gnu/packages/gnome.scm (tracker-miners): Update to 3.6.1.
 2023-10-21 21:52:30 +02:00
Liliana Marie Prikler
a7be930240
gnu: Remove gnome-todo. 
* gnu/packages/gnome.scm (gnome-todo): Delete variable.
 2023-10-13 20:37:36 +02:00
Liliana Marie Prikler
93a69ccbc5
gnu: workrave: Use new input style. 
* gnu/packages/gnome.scm (workrave)[native-inputs]: Drop labels.
 2023-10-13 20:37:36 +02:00
Liliana Marie Prikler
cf8514ca42
gnu: workrave: Update to 1.10.52. 
* gnu/packages/gnome.scm (workrave): Update to 1.10.52.
 2023-10-13 20:37:36 +02:00
Liliana Marie Prikler
f61d1d63d8
gnu: gthumb: Use new input style. 
* gnu/packages/gnome.scm (gthumb)[inputs, native-inputs]: Drop labels.
 2023-10-13 20:37:36 +02:00
Liliana Marie Prikler
d5ea7441be
gnu: gthumb: Update to 3.12.4. 
* gnu/packages/gnome.scm (gthumb): Update to 3.12.4.
 2023-10-13 20:37:35 +02:00
Liliana Marie Prikler
1468bf8db5
gnu: gnome-mahjongg: Update to 3.40.0. 
* gnu/packages/gnome.scm (gnome-mahjongg): Update to 3.40.0.
 2023-10-13 20:37:35 +02:00
Liliana Marie Prikler
9f04e18065
gnu: gitg: Update to 44. 
* gnu/packages/gnome.scm (gitg): Update to 44.
[source]: Remove “gitg-fix-positional-argument.patch”.
[inputs]: Add gpgme and libhandy.
* gnu/packages/patches/gitg-fix-positional-argument.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Unregister it.
 2023-10-13 20:37:35 +02:00
Liliana Marie Prikler
4d182aaf0f
gnu: libhandy: Update to 1.8.2. 
* gnu/packages/gnome.scm (libhandy): Update to 1.8.2.
 2023-10-13 20:37:35 +02:00
Liliana Marie Prikler
ff3ba62c47
gnu: libgit2-glib: Update to 1.2.0. 
* gnu/packages/gnome.scm (libgit2-glib): Update to 1.2.0.
 2023-10-13 20:37:34 +02:00
Vivien Kraus
b701a7018d
gnu: upower: Update to 1.90.2. 
Upower has an extra hardware description file for use with udev.  It should be
installed under upower’s output, not eudev’s.

A test is disabled, for calling an unimplemented bluez method.  The
conditional 'adjust-test-for-excess-precision phase is included in the new
'adjust-test-suite, so that the list of phases is always the same.

* gnu/packages/gnome.scm (upower): Update to 1.90.2.
[#:configure-flags]: Set udevhwdbdir.
[#:phases] <adjust-test-for-excess-precision>: Add this phase
unconditionnally
<disable-failing-test>: Disable test_bluetooth_hidpp_mouse.
[inputs]: Remove dbus-glib.
[native-inputs]: Add dbus.
 2023-10-10 21:59:25 +02:00
Vivien Kraus
ee554a35e0
gnu: libgudev: Update to 238. 
* gnu/packages/gnome.scm (libgudev): Update to 238.
 2023-10-10 21:59:25 +02:00
Vivien Kraus
cde1becfab
gnu: eudev: Update to 3.2.14. 
Eudev now has a hardware database /etc/udev/hwdb.bin made up of descriptions
installed in the /lib/udev/hwdb.d directory of each package, and more
generally, UDEV_HWDB_PATH.  This database index is compiled with udevadm hwdb
--update.  The udev-service-type collects the files and compiles the index.
Previously, the hardware description files provided by eudev would be compiled
into $prefix/etc/udev/hwdb.bin in the eudev output.

* gnu/packages/linux.scm (eudev): Update to 3.2.14.
[modules]: Import (guix build utils).
[#:phases] <allow-eudev-hwdb>: New phase.
<install-in-lib>: New phase.
<build-hwdb>: Remove phase.
[#:configure-flags]: Set sysconfdir to avoid a prefix.
[native-search-paths]: Add UDEV_HWDB_PATH.
* gnu/packages/patches/eudev-rules-directory.patch: Rebase it.
 2023-10-10 21:59:24 +02:00
Vivien Kraus
d6462be6a8
gnu: gnome-control-center: Update to 44.3. 
Some previous fixes have been merged upstream. The gnome version is now read
from a dbus service, and passwd is already searched in /run/setuid-programs.

In order to let the tests run, we use the same tests environment as
gnome-shell.

* gnu/packages/gnome.scm (gnome-control-center): Update to 44.3. Apply
gnome-control-center-firmware-security.patch.
[#:phases]<patch-paths>: Adjust accordingly.
<skip-gtk-update-icon-cache>: Adjust accordingly.
<check>: Override the check phase to run under dbus.
[native-inputs]: Add setxkbmap.

Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
 2023-10-09 21:54:16 +02:00
Vivien Kraus
3066ad29cc
gnu: gnome-control-center: Add gnome-control-center-firmware-security.patch. 
This patch disables the firmware panel for future gnome-control-center
versions.

* gnu/packages/patches/gnome-control-center-firmware-security.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it here.

Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
 2023-10-09 21:54:16 +02:00
Liliana Marie Prikler
24fee2615c
Merge branch 'master' into gnome-team 2023-10-09 21:21:29 +02:00
Clément Lassieur
7937c8827b
gnu: icu4c-73-promise: Fix broken test. 
* gnu/local.mk (dist_patch_DATA): Add patch.
* gnu/packages/gnuzilla.scm (icu4c-73-promise)[source]: Add patch.
* gnu/packages/patches/icu4c-fix-TestHebrewCalendarInTemporalLeapYear.patch:
New file.
 2023-10-09 18:11:07 +02:00
Efraim Flashner
87ffb3d3fb
gnu: isync: Patch path to openssl binary. 
* gnu/packages/mail.scm (isync)[arguments]: Add a phase to patch the
path to the openssl binary for mbsync-get-cert.
 2023-10-09 15:30:49 +03:00
Ricardo Wurmus
00feb9865a
gnu: povray: Update to 3.7.0.10. 
* gnu/packages/graphics.scm (povray): Update to 3.7.0.10.
[source]: Simplify snippet.
 2023-10-09 11:40:26 +02:00
Ricardo Wurmus
6e99158abb
gnu: povray: Drop input labels. 
* gnu/packages/graphics.scm (povray)[inputs]: Remove all input labels.
[arguments]: Use G-expression to avoid the use of %build-inputs.
 2023-10-09 11:40:26 +02:00
John Kehayias
321979a153
gnu: imgui@1.86: Adjust make-flags. 
* gnu/packages/toolkits.scm (imgui-1.86)[arguments]: Remove the
"-DIMGUI_ENABLE_FREETYPE" make-flag which breaks the display of mangohud, the
only dependent.  The "-DImDrawIdx=unsigned int" make-flag was previously
removed, so we can do both by filtering make-flags starting with "-D".
[inputs]: Remove freetype.
 2023-10-09 00:05:57 -04:00
Bruno Victal
40a1254b05
gnu: mympd: Update to 12.0.4. 
* gnu/packages/mpd.scm (mympd): Update to 12.0.4.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-10-08 23:43:50 +02:00
Luis Felipe
0be2108d40
gnu: Add font-orbitron. 
* gnu/packages/fonts.scm (font-orbitron): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-10-08 23:43:50 +02:00
Karl Hallsby
0be51fe03b
gnu: Add tree-sitter-scala. 
* gnu/packages/tree-sitter.scm (tree-sitter-scala): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-10-08 23:43:50 +02:00
john muhl
a44569899a
gnu: Add tree-sitter-lua. 
* gnu/packages/tree-sitter.scm (tree-sitter-lua): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-10-08 23:43:50 +02:00
B. Wilson
f59c31deaf
gnu: Add smithforth. 
* gnu/packages/forth (smithforth): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-10-08 23:43:50 +02:00
Rikard Nordgren
e1dcf86a35
gnu: Add python-beziers. 
* gnu/packages/fontutils.scm (python-beziers): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-10-08 23:43:50 +02:00
Nicolas Graves
e9c0bb0341
gnu: python-distributed: Disable failing tests. 
* gnu/packages/python-science.scm (python-distributed): Disable failing tests.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-10-08 23:43:50 +02:00
Efraim Flashner
9b77bd0b9b
gnu: vim: Update to 9.0.2001. 
* gnu/packages/vim.scm (vim): Update to 9.0.2001.
[arguments]: Skip another test.
 2023-10-08 10:19:08 +03:00
Liliana Marie Prikler
577fd21122
gnu: mpd-mpc: Install bash completions in correct location. 
* gnu/packages/mpd.scm (mpd-mpc)[#:phases]: Add ‘move-completion’.
 2023-10-08 08:48:15 +02:00
Liliana Marie Prikler
2e0ed79118
gnu: emacs-next-minimal: Apply Guix patches. 
* gnu/packages/patches/emacs-next-native-comp-driver-options.patch: Add file.
* gnu/packages/patches/emacs-next-exec-path.patch: Add file.
* gnu/local.mk (dist_patch_DATA): Register them here.
* gnu/packages/emacs.scm (emacs-next-minimal)[origin](patches): Include the
same patches as emacs-minimal, save for the variants specific to emacs-next
introduced above.

Co-Authored-By: Nicolas Graves <ngraves@ngraves.fr>
Fixes: ‘emacs-next’ is almost unusable <https://bugs.gnu.org/66227>
 2023-10-08 08:40:57 +02:00
jgart
6e63530954
gnu: python-glymur: Update to 0.12.8. 
* gnu/packages/python-xyz.scm (python-glymur): Update to 0.12.8.
[native-inputs]: Add python-scikit-image.
 2023-10-07 23:31:35 -05:00
Sergio Pastor Pérez
e328a5f746
gnu: Add gnome-shell-extension-night-theme-switcher. 
* gnu/packages/gnome-xyz.scm (gnome-shell-extension-night-theme-switcher): New variable.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2023-10-07 11:29:47 -04:00
Guillaume Le Vaillant
b566e1a98a
gnu: gqrx: Update to 2.17. 
* gnu/packages/radio.scm (gqrx): Update to 2.17.
 2023-10-07 11:51:43 +02:00
jgart
84431a30ea
gnu: python-openai: Update to 0.28.1. 
* gnu/packages/python-web.scm (python-openai): Update to 0.28.1.
 2023-10-07 00:04:07 -05:00
pinoaffe
6d5a75c70e
gnu: librepcb: Update to 1.0.0. 
* gnu/packages/engineering.scm (librepcb): Update to 1.0.0.
[source]: Add snippet to remove some vendored dependencies.
[build-system]: Use cmake-build-system.
[inputs]: Add fontconfig, fontobene-qt5, glu, hoedown, muparser,
opencascade-occt, clipper, qtdeclarative-5, qtquickcontrols2-5, quazip.
[native-inputs]: Add googletest, pkg-config.
[arguments]<#:configure-flags>: Add "-DUNBUNDLE_FONTOBENE_QT5=ON",
"-DUNBUNDLE_GTEST=ON", "-DUNBUNDLE_HOEDOWN=ON", "-DUNBUNDLE_MUPARSER=ON",
"-DUNBUNDLE_POLYCLIPPING=ON", "-DUNBUNDLE_QUAZIP=ON".
<#:phases>: Don't override the configure phase.  Override the check phase and
skip failing tests.
[license]: Remove licenses from unbundled dependencies.

Signed-off-by: Vinicius Monego <monego@posteo.net>
 2023-10-06 21:39:44 -03:00
pinoaffe
ced91adcc0
gnu: Add fontobene-qt5. 
* gnu/packages/fontutils.scm (fontobene-qt5): New variable.

Signed-off-by: Vinicius Monego <monego@posteo.net>
 2023-10-06 21:34:22 -03:00
Wilko Meyer
add2a22ad7
gnu: exim: Update to 4.96.1 [security updates]. 
Fixes CVE-2023-42114, CVE-2023-42115, CVE-2023-42116, CVE-2023-42117,
CVE-2023-42118, and CVE-2023-42119.  See
<https://www.exim.org/static/doc/security/CVE-2023-zdi.txt> for more details.

* gnu/packages/mail.scm (exim): Update to 4.96.1.

Signed-off-by: John Kehayias <john.kehayias@protonmail.com>
 2023-10-06 17:04:50 -04:00
jgart
ad10bbe563
gnu: python-pudb: Update to 2023.1. 
* gnu/packages/python-xyz.scm (python-pudb): Update to 2023.1.
 2023-10-06 14:46:26 -05:00
Ricardo Wurmus
88ff6feca1
gnu: Add r-webchem. 
* gnu/packages/cran.scm (r-webchem): New variable.
 2023-10-06 16:37:16 +02:00
Ricardo Wurmus
9d4339afb1
build-system/minify: Use esbuild. 
* guix/build-system/minify.scm (default-uglify-js): Replace this procedure...
(default-esbuild): ...with this new procedure.
(lower): Use it, and add "esbuild" to build inputs.
* guix/build/minify-build-system.scm (minify): Invoke esbuild instead of
setting up a pipe to uglifyjs.
* gnu/packages/cran.scm (r-shiny)[native-inputs]: Replace node-uglify-js with
esbuild.
* gnu/packages/statistics.scm (r-dt)[native-inputs]: Same.
 2023-10-06 16:37:16 +02:00
Ricardo Wurmus
b19dfb9d3a
gnu: Add linasm. 
* gnu/packages/maths.scm (linasm): New variable.
 2023-10-06 16:37:16 +02:00
Efraim Flashner
a7e6b4c98b
gnu: openjdk-12: Fix building on aarch64-linux. 
* gnu/packages/java.scm (openjdk-12)[arugments]: When building for
aarch64-linux add a phase to remove a duplicate line.
 2023-10-06 16:21:44 +03:00
Ricardo Wurmus
8d27ef1ed3
gnu: r-dt: Update to 0.30. 
* gnu/packages/statistics.scm (r-dt): Update to 0.30.
 2023-10-06 13:01:48 +02:00
Ricardo Wurmus
326775b345
gnu: r-hunspell: Update to 3.0.3. 
* gnu/packages/cran.scm (r-hunspell): Update to 3.0.3.
 2023-10-06 13:01:48 +02:00
Ricardo Wurmus
33f4951444
gnu: r-aplot: Update to 0.2.2. 
* gnu/packages/cran.scm (r-aplot): Update to 0.2.2.
 2023-10-06 13:01:48 +02:00
Ricardo Wurmus
a7b7b9bad3
gnu: r-chk: Update to 0.9.1. 
* gnu/packages/cran.scm (r-chk): Update to 0.9.1.
 2023-10-06 13:01:48 +02:00
Ricardo Wurmus
900f67dea6
gnu: r-sungeo: Update to 1.1.1. 
* gnu/packages/cran.scm (r-sungeo): Update to 1.1.1.
[propagated-inputs]: Remove r-fasterize; add r-stringr and r-terra.
 2023-10-06 13:01:48 +02:00
David Elsing
1b5067c0d0
gnu: Add suitesparse-umfpack. 
* gnu/packages/maths.scm (suitesparse-umfpack): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-10-06 12:26:47 +02:00
David Elsing
383d54282e
gnu: Add suitesparse-spqr. 
* gnu/packages/maths.scm (suitesparse-spqr): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-10-06 12:26:47 +02:00
David Elsing
b278336180
gnu: Add suitesparse-spex. 
* gnu/packages/maths.scm (suitesparse-spex): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-10-06 12:26:47 +02:00
David Elsing
7302412676
gnu: Add suitesparse-mongoose. 
* gnu/packages/maths.scm (suitesparse-mongoose): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-10-06 12:26:46 +02:00
David Elsing
9dde72a23c
gnu: Add suitesparse-rbio. 
* gnu/packages/maths.scm (suitesparse-rbio): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-10-06 12:26:46 +02:00
David Elsing
e890349067
gnu: Add suitesparse-ldl. 
* gnu/packages/maths.scm (suitesparse-ldl): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-10-06 12:26:46 +02:00
David Elsing
4b512f5491
gnu: Add suitesparse-klu. 
* gnu/packages/maths.scm (suitesparse-klu): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-10-06 12:26:46 +02:00
David Elsing
ec2c7d2d48
gnu: Add suitesparse-cxsparse. 
* gnu/packages/maths.scm (suitesparse-cxsparse): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-10-06 12:26:46 +02:00
David Elsing
75faca26c2
gnu: Add suitesparse-cholmod. 
* gnu/packages/maths.scm (suitesparse-cholmod): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-10-06 12:26:46 +02:00
David Elsing
7c5d3592e7
gnu: Add metis-suitesparse. 
* gnu/packages/maths.scm (metis-suitesparse): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-10-06 12:26:46 +02:00
David Elsing
95ecbdc9b1
gnu: Add gklib-suitesparse. 
* gnu/packages/maths.scm (gklib-suitesparse): New variable.
* gnu/packages/patches/gklib-suitesparse.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-10-06 12:26:45 +02:00
David Elsing
9b5dbc46e6
gnu: Add metis-5.2. 
* gnu/packages/maths.scm (metis-5.2): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-10-06 12:26:45 +02:00
David Elsing
998a79355c
gnu: Add gklib. 
* gnu/packages/maths.scm (gklib): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-10-06 12:26:45 +02:00
David Elsing
a764c7c0b9
gnu: Add suitesparse-ccolamd. 
* gnu/packages/maths.scm (suitesparse-ccolamd): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-10-06 12:26:45 +02:00
David Elsing
3fc3b35738
gnu: Add suitesparse-colamd. 
* gnu/packages/maths.scm (suitesparse-colamd): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-10-06 12:26:45 +02:00
David Elsing
97edef50f4
gnu: Add suitesparse-camd. 
* gnu/packages/maths.scm (suitesparse-camd): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-10-06 12:26:45 +02:00
David Elsing
913e2dd61f
gnu: Add suitesparse-btf. 
* gnu/packages/maths.scm (suitesparse-btf): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-10-06 12:26:45 +02:00
David Elsing
2eb40f8b39
gnu: Add suitesparse-amd. 
* gnu/packages/maths.scm (suitesparse-amd): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-10-06 12:26:45 +02:00
David Elsing
a6fc1164c4
gnu: Add suitesparse-config. 
The suitesparse-source variable contains the entire SuiteSparse source code,
which is used for all subpackages.

* gnu/packages/maths.scm (suitesparse-version, suitesparse-source,
suitesparse-config): New variables.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-10-06 12:26:44 +02:00
David Elsing
4a368c3a8b
gnu: suitesparse: Tweak description. 
* gnu/packages/maths.scm (suitesparse)[description]: Mention that all
subpackages are included.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-10-06 12:26:44 +02:00
Ludovic Courtès
16fd9d6e3d
gnu: guix: Update to e863274. 
This includes the ‘guix perform-download’ fix from commit
762fdbdef5.

* gnu/packages/package-management.scm (guix): Update to e863274.
 2023-10-06 12:26:44 +02:00
Lars Rustand
110378934e
gnu: Add vendor-reset-linux-module. 
* gnu/packages/linux.scm (vendor-reset-linux-module): New variable.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
 2023-10-06 11:52:14 +02:00
Denis 'GNUtoo' Carikli
9d0da4ced3
gnu: matterbridge: Update to 1.26.0 
* gnu/packages/messaging.scm (matterbridge): Update to 1.26.0

Signed-off-by: Denis 'GNUtoo' Carikli <GNUtoo@cyberdimension.org>
Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
 2023-10-06 11:52:13 +02:00
Vinicius Monego
9930aeb0e3
gnu: Add python-mapie. 
* gnu/packages/statistics.scm (python-mapie): New variable.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
 2023-10-06 11:52:13 +02:00
Ricardo Wurmus
e97e708958
gnu: r-biomvrcns: Patch R constants. 
* gnu/packages/bioconductor.scm (r-biomvrcns)[arguments]: Add phase
'patch-constants.
 2023-10-06 08:55:11 +02:00
Fabio Natali
c49cc1ac12
gnu: guile-ini: Added missing propagated input ‘guile-lib’. 
Fixes <https://issues.guix.gnu.org/66315>.

* gnu/packages/guile-xyz.scm (guile-ini)[propagated-inputs]: Add
GUILE-LIB.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-10-05 23:14:55 +02:00
André Batista
be214b56c0
gnu: prosody: Update to 0.12.4. 
* gnu/packages/messaging.scm (prosody): Update to 0.12.4.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-10-05 23:14:55 +02:00
Artyom V. Poptsov
45fbcc452f
gnu: go-ipfs: Update to 0.14.0. 
* gnu/packages/ipfs.scm (go-ipfs): Update to 0.14.0.
  [source]: Change "go-ipfs" to "kubo" in the source link.
  [arguments]: Rename "go-ipfs" to "kubo".

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-10-05 23:14:55 +02:00
B. Wilson
87b3ac13fe
gnu: Add apple-bash. 
* gnu/packages/apple.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODELS): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-10-05 23:14:54 +02:00
Distopico
efab2a25be
gnu: rust-trybuild: Update 1.0.19 version hash. 
Fixes <https://issues.guix.gnu.org/66345>.

* gnu/packages/crates-io.scm (rust-trybuild): Update 1.0.19 hash.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-10-05 23:14:53 +02:00
Arun Isaac
0374640618
gnu: Add cgit-pink. 
* gnu/packages/version-control.scm (cgit-pink): New variable.
 2023-10-05 17:38:33 +01:00
Arun Isaac
db52c06c3d
gnu: cgit: Fix cross compilation. 
* gnu/packages/version-control.scm (cgit)[native-inputs]: Move bzip2, gzip and
xz to ...
[inputs]: ... here. Add bash-minimal.
[arguments]: Use cc-for-target.
 2023-10-05 17:38:32 +01:00
Arun Isaac
faad060771
gnu: cgit: Update package style. 
* gnu/packages/version-control.scm (cgit)[arguments]: Rewrite using
G-expressions. Do not return #t from custom phases.
 2023-10-05 17:38:28 +01:00
Mathieu Othacehe
29243a9f39
gnu: python-pynetbox: Update to 7.2.0. 
* gnu/packages/python-web.scm (python-pynetbox): Update to 7.2.0.
 2023-10-05 18:31:11 +02:00
Timotej Lazar
21f3f30141
gnu: Add python-pynetbox. 
* gnu/packages/python-web.scm (python-pynetbox): New variable.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
 2023-10-05 17:23:48 +02:00
Sharlatan Hellseher
9917079bd7
gnu: Add WCSTools. 
* gnu/packages/astronomy.scm (wcstools): New variable.
* gnu/packages/patches/wcstools-extend-makefiles.patch: New file.
* gnu/local.mk: Add it.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
 2023-10-05 17:07:16 +02:00
Ricardo Wurmus
d37e24827a
gnu: r-bayesfactor: Update to 0.9.12-4.5. 
* gnu/packages/statistics.scm (r-bayesfactor): Update to 0.9.12-4.5.
 2023-10-05 15:16:29 +02:00
Ricardo Wurmus
bba0dc6e5d
gnu: r-puniform: Update to 0.2.7. 
* gnu/packages/statistics.scm (r-puniform): Update to 0.2.7.
[propagated-inputs]: Add r-numderiv.
 2023-10-05 15:16:29 +02:00
Ricardo Wurmus
a7b9a558d5
gnu: r-lubridate: Update to 1.9.3. 
* gnu/packages/statistics.scm (r-lubridate): Update to 1.9.3.
 2023-10-05 15:16:29 +02:00
Ricardo Wurmus
6015f41454
gnu: r-vgam: Update to 1.1-9. 
* gnu/packages/statistics.scm (r-vgam): Update to 1.1-9.
 2023-10-05 15:16:29 +02:00
Ricardo Wurmus
f3a73e9ce5
gnu: r-rmarkdown: Update to 2.25. 
* gnu/packages/statistics.scm (r-rmarkdown): Update to 2.25.
 2023-10-05 15:16:29 +02:00
Ricardo Wurmus
6535a7d047
gnu: r-withr: Update to 2.5.1. 
* gnu/packages/statistics.scm (r-withr): Update to 2.5.1.
 2023-10-05 15:16:29 +02:00
Ricardo Wurmus
3b9bb9c61e
gnu: r-openssl: Update to 2.1.1. 
* gnu/packages/statistics.scm (r-openssl): Update to 2.1.1.
 2023-10-05 15:16:29 +02:00
Ricardo Wurmus
48dcf15dea
gnu: r-dbplyr: Update to 2.3.4. 
* gnu/packages/statistics.scm (r-dbplyr): Update to 2.3.4.
 2023-10-05 15:16:29 +02:00
Ricardo Wurmus
d9993b98c6
gnu: r-markdown: Update to 1.9. 
* gnu/packages/statistics.scm (r-markdown): Update to 1.9.
 2023-10-05 15:16:29 +02:00
Ricardo Wurmus
8f145cafec
gnu: r-evaluate: Update to 0.22. 
* gnu/packages/statistics.scm (r-evaluate): Update to 0.22.
 2023-10-05 15:16:29 +02:00
Ricardo Wurmus
a82e566cbc
gnu: r-plyr: Update to 1.8.9. 
* gnu/packages/statistics.scm (r-plyr): Update to 1.8.9.
 2023-10-05 15:16:29 +02:00
Ricardo Wurmus
07bf9f857f
gnu: r-matrix: Update to 1.6-1.1. 
* gnu/packages/statistics.scm (r-matrix): Update to 1.6-1.1.
 2023-10-05 15:16:29 +02:00
Ricardo Wurmus
8b56e8fd32
gnu: r-lattice: Update to 0.21-9. 
* gnu/packages/statistics.scm (r-lattice): Update to 0.21-9.
 2023-10-05 15:16:29 +02:00
Ricardo Wurmus
93f0029067
gnu: r-varhandle: Update to 2.0.6. 
* gnu/packages/cran.scm (r-varhandle): Update to 2.0.6.
 2023-10-05 15:16:29 +02:00
Ricardo Wurmus
bbf8ac3229
gnu: r-mockery: Update to 0.4.4. 
* gnu/packages/cran.scm (r-mockery): Update to 0.4.4.
 2023-10-05 15:16:29 +02:00
Ricardo Wurmus
9e2434a2ac
gnu: r-paws: Update to 0.4.0. 
* gnu/packages/cran.scm (r-paws): Update to 0.4.0.
[propagated-inputs]: Add r-paws-common.
 2023-10-05 15:16:29 +02:00
Ricardo Wurmus
dee60226bb
gnu: r-paws-common: Update to 0.6.1. 
* gnu/packages/cran.scm (r-paws-common): Update to 0.6.1.
 2023-10-05 15:16:29 +02:00
Ricardo Wurmus
5a62f0cb03
gnu: r-tensorflow: Update to 2.14.0. 
* gnu/packages/cran.scm (r-tensorflow): Update to 2.14.0.
[propagated-inputs]: Add r-lifecycle.
 2023-10-05 15:16:29 +02:00
Ricardo Wurmus
9737b40053
gnu: r-exactextractr: Update to 0.10.0. 
* gnu/packages/cran.scm (r-exactextractr): Update to 0.10.0.
 2023-10-05 15:16:29 +02:00
Ricardo Wurmus
bb034d5a57
gnu: r-protolite: Update to 2.3.0. 
* gnu/packages/cran.scm (r-protolite): Update to 2.3.0.
 2023-10-05 15:16:29 +02:00
Ricardo Wurmus
ce99c51f8f
gnu: r-vroom: Update to 1.6.4. 
* gnu/packages/cran.scm (r-vroom): Update to 1.6.4.
 2023-10-05 15:16:29 +02:00
Ricardo Wurmus
2c6fb7a21f
gnu: r-delaporte: Update to 8.3.0. 
* gnu/packages/cran.scm (r-delaporte): Update to 8.3.0.
 2023-10-05 15:16:29 +02:00
Ricardo Wurmus
12774311dd
gnu: r-pdftools: Update to 3.4.0. 
* gnu/packages/cran.scm (r-pdftools): Update to 3.4.0.
 2023-10-05 15:16:29 +02:00
Ricardo Wurmus
06fb5cf520
gnu: r-vdiffr: Update to 1.0.7. 
* gnu/packages/cran.scm (r-vdiffr): Update to 1.0.7.
 2023-10-05 15:16:29 +02:00
Ricardo Wurmus
4d0861d307
gnu: r-mlr3misc: Update to 0.13.0. 
* gnu/packages/cran.scm (r-mlr3misc): Update to 0.13.0.
 2023-10-05 15:16:29 +02:00
Ricardo Wurmus
1d7dfe2f8d
gnu: r-seurat: Update to 4.4.0. 
* gnu/packages/cran.scm (r-seurat): Update to 4.4.0.
[propagated-inputs]: Add r-purrr.
 2023-10-05 15:16:29 +02:00
Ricardo Wurmus
f7b4b14d49
gnu: r-seuratobject: Update to 4.1.4. 
* gnu/packages/cran.scm (r-seuratobject): Update to 4.1.4.
 2023-10-05 15:16:29 +02:00
Ricardo Wurmus
9703a303f6
gnu: r-metafor: Update to 4.4-0. 
* gnu/packages/cran.scm (r-metafor): Update to 4.4-0.
 2023-10-05 15:16:28 +02:00
Ricardo Wurmus
509ad5c498
gnu: r-brms: Update to 2.20.4. 
* gnu/packages/cran.scm (r-brms): Update to 2.20.4.
 2023-10-05 15:16:28 +02:00
Ricardo Wurmus
2bcbcea451
gnu: r-projpred: Update to 2.7.0. 
* gnu/packages/cran.scm (r-projpred): Update to 2.7.0.
[propagated-inputs]: Add r-gtools.
 2023-10-05 15:16:28 +02:00
Ricardo Wurmus
d1f4bc7ae1
gnu: r-rstanarm: Update to 2.26.1. 
* gnu/packages/cran.scm (r-rstanarm): Update to 2.26.1.
[propagated-inputs]: Add r-posterior.
 2023-10-05 15:16:28 +02:00
Ricardo Wurmus
ee4d8fabbb
gnu: r-rsconnect: Update to 1.1.1. 
* gnu/packages/cran.scm (r-rsconnect): Update to 1.1.1.
 2023-10-05 15:16:28 +02:00
Ricardo Wurmus
b5fc66d0ec
gnu: r-erm: Update to 1.0-4. 
* gnu/packages/cran.scm (r-erm): Update to 1.0-4.
 2023-10-05 15:16:28 +02:00
Ricardo Wurmus
250f6b92f7
gnu: r-kutils: Update to 1.73. 
* gnu/packages/cran.scm (r-kutils): Update to 1.73.
 2023-10-05 15:16:28 +02:00
Ricardo Wurmus
5767e3f443
gnu: r-rsvg: Update to 2.5.0. 
* gnu/packages/cran.scm (r-rsvg): Update to 2.5.0.
 2023-10-05 15:16:28 +02:00
Ricardo Wurmus
4aef0d05e1
gnu: r-caretensemble: Update to 2.0.3. 
* gnu/packages/cran.scm (r-caretensemble): Update to 2.0.3.
 2023-10-05 15:16:28 +02:00
Ricardo Wurmus
09a189941a
gnu: r-seewave: Update to 2.2.2. 
* gnu/packages/cran.scm (r-seewave): Update to 2.2.2.
 2023-10-05 15:16:28 +02:00
Ricardo Wurmus
b37735ec76
gnu: r-gamlss: Update to 5.4-20. 
* gnu/packages/cran.scm (r-gamlss): Update to 5.4-20.
 2023-10-05 15:16:28 +02:00
Ricardo Wurmus
0f08f438c0
gnu: r-parameters: Update to 0.21.2. 
* gnu/packages/cran.scm (r-parameters): Update to 0.21.2.
 2023-10-05 15:16:28 +02:00
Ricardo Wurmus
03cec4ae27
gnu: r-graphlayouts: Update to 1.0.1. 
* gnu/packages/cran.scm (r-graphlayouts): Update to 1.0.1.
 2023-10-05 15:16:28 +02:00
Ricardo Wurmus
0025676cbe
gnu: r-clue: Update to 0.3-65. 
* gnu/packages/cran.scm (r-clue): Update to 0.3-65.
 2023-10-05 15:16:28 +02:00
Ricardo Wurmus
486d1f8613
gnu: r-sctransform: Update to 0.4.0. 
* gnu/packages/cran.scm (r-sctransform): Update to 0.4.0.
 2023-10-05 15:16:28 +02:00
Ricardo Wurmus
e20c61e8ab
gnu: r-arrow: Update to 13.0.0.1. 
* gnu/packages/cran.scm (r-arrow): Update to 13.0.0.1.
 2023-10-05 15:16:28 +02:00
Ricardo Wurmus
0910fe7048
gnu: r-ggfun: Update to 0.1.3. 
* gnu/packages/cran.scm (r-ggfun): Update to 0.1.3.
[propagated-inputs]: Add r-cli.
 2023-10-05 15:16:28 +02:00
Ricardo Wurmus
52a2028760
gnu: r-europepmc: Update to 0.4.3. 
* gnu/packages/cran.scm (r-europepmc): Update to 0.4.3.
 2023-10-05 15:16:28 +02:00
Ricardo Wurmus
60df6d63d7
gnu: r-polyclip: Update to 1.10-6. 
* gnu/packages/cran.scm (r-polyclip): Update to 1.10-6.
 2023-10-05 15:16:28 +02:00
Ricardo Wurmus
103260da87
gnu: r-yulab-utils: Update to 0.1.0. 
* gnu/packages/cran.scm (r-yulab-utils): Update to 0.1.0.
[propagated-inputs]: Add r-cli, r-digest, and r-fs.
 2023-10-05 15:16:28 +02:00
Ricardo Wurmus
1a2fac04b4
gnu: r-osqp: Update to 0.6.3.1. 
* gnu/packages/cran.scm (r-osqp): Update to 0.6.3.1.
 2023-10-05 15:16:28 +02:00
Ricardo Wurmus
3a7e7842de
gnu: r-units: Update to 0.8-4. 
* gnu/packages/cran.scm (r-units): Update to 0.8-4.
 2023-10-05 15:16:28 +02:00
Ricardo Wurmus
f66abe6a17
gnu: r-apcluster: Update to 1.4.11. 
* gnu/packages/cran.scm (r-apcluster): Update to 1.4.11.
 2023-10-05 15:16:28 +02:00
Ricardo Wurmus
0e29b39b49
gnu: r-bayesm: Update to 3.1-6. 
* gnu/packages/cran.scm (r-bayesm): Update to 3.1-6.
 2023-10-05 15:16:28 +02:00
Ricardo Wurmus
3f9381c2e5
gnu: r-iso: Update to 0.0-21. 
* gnu/packages/cran.scm (r-iso): Update to 0.0-21.
 2023-10-05 15:16:28 +02:00
Ricardo Wurmus
9494ac4edd
gnu: r-gridpattern: Update to 1.1.0. 
* gnu/packages/cran.scm (r-gridpattern): Update to 1.1.0.
 2023-10-05 15:16:28 +02:00
Ricardo Wurmus
cc7ba0ef28
gnu: r-qmri: Update to 1.2.7. 
* gnu/packages/cran.scm (r-qmri): Update to 1.2.7.
 2023-10-05 15:16:28 +02:00
Ricardo Wurmus
6eca8ff183
gnu: r-waffle: Update to 1.0.2. 
* gnu/packages/cran.scm (r-waffle): Update to 1.0.2.
[propagated-inputs]: Add r-curl, r-dt, r-htmlwidgets, r-plyr, r-rlang, and r-stringr.
 2023-10-05 15:16:28 +02:00
Ricardo Wurmus
8372038fc4
gnu: r-sodium: Update to 1.3.0. 
* gnu/packages/cran.scm (r-sodium): Update to 1.3.0.
 2023-10-05 15:16:28 +02:00
Ricardo Wurmus
03de1715ea
gnu: r-activity: Update to 1.3.4. 
* gnu/packages/cran.scm (r-activity): Update to 1.3.4.
 2023-10-05 15:16:28 +02:00
Ricardo Wurmus
ab2d831a0e
gnu: r-rcpphnsw: Update to 0.5.0. 
* gnu/packages/cran.scm (r-rcpphnsw): Update to 0.5.0.
 2023-10-05 15:16:27 +02:00
Ricardo Wurmus
f8d59b3c58
gnu: r-rcppalgos: Update to 2.8.2. 
* gnu/packages/cran.scm (r-rcppalgos): Update to 2.8.2.
 2023-10-05 15:16:27 +02:00
Ricardo Wurmus
09c2b23bf9
gnu: r-gert: Update to 2.0.0. 
* gnu/packages/cran.scm (r-gert): Update to 2.0.0.
 2023-10-05 15:16:27 +02:00
Ricardo Wurmus
7eb383815f
gnu: r-effectsize: Update to 0.8.6. 
* gnu/packages/cran.scm (r-effectsize): Update to 0.8.6.
 2023-10-05 15:16:27 +02:00
Ricardo Wurmus
6049a5ce62
gnu: r-coin: Update to 1.4-3. 
* gnu/packages/cran.scm (r-coin): Update to 1.4-3.
 2023-10-05 15:16:27 +02:00