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45172 Commits

Author SHA1 Message Date
Efraim Flashner
3977728026
gnu: rust-maplit-1.0: Don't hide package. 
* gnu/packages/crates-io.scm (rust-maplit-1.0)[arguments]: Skip build.
[properties]: Remove field.
 2020-01-21 17:45:53 +02:00
Efraim Flashner
328df292aa
gnu: rust-lzma-sys-0.1: Don't hide package. 
* gnu/packages/crates-io.scm (rust-lzma-sys-0.1)[arguments]: Add
rust-libc-0.2, rust-cc-1.0, rust-pkg-config-0.3 to cargo-inputs. Add
custom phase to delete vendored code.
[native-inputs]: Add pkg-config, xz.
[properties]: Remove field.
 2020-01-21 17:44:37 +02:00
Efraim Flashner
af996d9086
gnu: rust-permutohedron-0.2: Don't hide package. 
* gnu/packages/crates-io.scm (rust-permutohedron-0.2)[arguments]: Skip
build.
[properties]: Remove field.
 2020-01-21 17:28:18 +02:00
Efraim Flashner
2e1100f377
gnu: Add rust-matrixmultiply-0.1. 
* gnu/packages/crates-io.scm (rust-matrixmultiply-0.1): New variable.
 2020-01-21 17:26:30 +02:00
Efraim Flashner
a8a5cc6841
gnu: Add rust-heck-0.3. 
* gnu/packages/crates-io.scm (rust-heck-0.3): New variable.
 2020-01-21 17:24:31 +02:00
Efraim Flashner
b86409a76f
gnu: rust-unicode-segmentation-1.3: Fix inputs. 
* gnu/packages/crates-io.scm (rust-unicode-segmentation-1.3)[arguments]:
Replace rust-quickcheck-0.8 with 0.7 in cargo-development-inputs.
 2020-01-21 17:06:40 +02:00
Efraim Flashner
33d69d20ad
gnu: Add rust-quickcheck-0.5. 
* gnu/packages/crates-io.scm (rust-quickcheck-0.5): New variable.
 2020-01-21 17:04:07 +02:00
John Soo
393d721404
gnu: librsvg-next-source: Replace and update some dependencies. 
* gnu/packages/gnome.scm (librsvg-next-source): Update vendored replacements.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-21 16:24:02 +02:00
Efraim Flashner
16a5dfdc3c
gnu: rust-libssh2-sys-0.2: Update to 0.2.14. 
* gnu/packages/crates-io.scm (rust-libssh2-sys-0.2): Update to 0.2.14.
 2020-01-21 16:24:02 +02:00
Efraim Flashner
128aa31fe6
gnu: rust-openssl-sys-0.9: Don't hide package. 
* gnu/packages/crates-io.scm (rust-openssl-sys-0.9)[arguments]: Add
rust-libc-0.2, rust-autocfg-0.1, rust-cc-1.0, rust-pkg-config-0.3,
rust-vcpkg-0.2 to cargo-inputs. Add custom phase to find packaged
openssl.
[native-inputs]: Add openssl, pkg-config.
[properties]: Remove field.
 2020-01-21 16:24:02 +02:00
Efraim Flashner
d7364e85e0
gnu: rust-libssh2-sys-0.2: Don't hide package. 
* gnu/packages/crates-io.scm (rust-libssh2-sys-0.2)[arguments]: Add
rust-libc-0.2, rust-libz-sys-1.0, rust-openssl-sys-0.9, rust-cc-1.0,
rust-pkg-config-0.3, rust-vcpkg-0.2 to cargo-inputs. Add custom phase to
unbundle vendored sources and set environment variables.
[native-inputs]: Add libssh2, openssl, pkg-config, zlib.
[properties]: Remove field.
 2020-01-21 16:24:01 +02:00
Efraim Flashner
0c85385450
gnu: rust-libgit2-sys-0.10: Don't hide package. 
* gnu/packages/crates-io.scm (rust-libgit2-sys-0.10)[arguments]: Add
rust-libc-0.2, rust-libz-sys-1.0, rust-libssh2-sys-0.2,
rust-openssl-sys-0.9, rust-cc-1.0, rust-pkg-config-0.3 to cargo-inputs.
Add custom phase to unbundle vendored sources and set environment
variables.
[native-inputs]: Add libgit2, openssl, pkg-config, zlib.
[properties]: Remove field.
 2020-01-21 16:24:01 +02:00
Efraim Flashner
c40e3d0bad
gnu: tokei: Unbundle some dependencies. 
* gnu/packages/rust-apps.scm (tokei)[arguments]: Add custom phase to
delete vendored sources and set environment variables. Remove
rust-cc-1.0, rust-pkg-config-0.3, rust-toml-0.5 from cargo-inputs.
[native-inputs]: Add libgit2, openssl, pkg-config, zlib.
 2020-01-21 16:24:01 +02:00
Efraim Flashner
6dc67c2d11
gnu: rust-failure-derive-0.1: Fix inputs. 
* gnu/packages/crates-io.scm (rust-failure-derive-0.1)[arguments]:
Replace rust-quote-1.0 with 0.6 in cargo-inputs.
 2020-01-21 16:24:01 +02:00
John Soo
e29315b2d9
gnu: Add tokei. 
* gnu/packages/rust-apps.scm (tokei): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-21 16:24:01 +02:00
John Soo
72803f5cd2
gnu: Add rust-rust-argon2-0.5. 
* gnu/packages/crates-io.scm (rust-rust-argon2-0.5): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-21 16:24:00 +02:00
John Soo
f8607be8a8
gnu: Add rust-blake2b-simd-0.5. 
* gnu/packages/crates-io.scm (rust-blake2b-simd-0.5): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-21 16:24:00 +02:00
John Soo
5624b4292d
gnu: Add rust-arrayvec-0.5. 
* gnu/packages/crates-io.scm (rust-arrayvec-0.5): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-21 16:24:00 +02:00
Efraim Flashner
0f414f0da9
gnu: rust-thread-local-1.0: Don't hide package. 
* gnu/packages/crates-io.scm (rust-thread-local-1.0)[arguments]: Skip
build. Add rust-lazy-static-1.4 to cargo-inputs.
[properties]: Remove field.
 2020-01-21 16:24:00 +02:00
John Soo
27b75426c5
gnu: rust-thread-local-0.3: Don't hide package. 
* gnu/packages/crates-io.scm (rust-thread-local-0.3)[arguments]: Skip build.
Add rust-lazy-static-1.4 to cargo-inputs.
[properties]: Don't inherit field.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-21 16:24:00 +02:00
John Soo
d9b2c855bf
gnu: Add rust-thread-local-1.0. 
* gnu/packages/crates-io.scm (rust-thread-local-1.0): New variable.
(rust-thread-local-0.3): Inherit from rust-thread-local-1.0.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-21 16:23:59 +02:00
John Soo
8f414fa29d
gnu: Add rust-arrayref-0.3. 
* gnu/packages/crates-io.scm (rust-arrayref-0.3): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-21 16:23:59 +02:00
John Soo
c8a2b343d3
gnu: rust-kernel32-sys-0.2: Update dependencies. 
* gnu/packages/crates-io.scm (rust-kernel32-sys-0.2)[arguments]: Move
rust-winapi-build-0.1 from cargo-development-inputs to cargo-inputs.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-21 16:23:59 +02:00
John Soo
05f8588c2d
gnu: rust-pest-generator-2.1: Update to 2.1.1. 
* gnu/packages/crates-io.scm (rust-pest-generator-2.1): Update to 2.1.1.
[arguments]: In cargo-inputs replace rust-proc-macro2-0.4 with 1.0,
rust-quote-0.6 with 1.0, rust-syn-0.15 with 1.0.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-21 16:23:59 +02:00
John Soo
699c454945
gnu: rust-pest-meta-2.1: Update to 2.1.2. 
* gnu/packages/crates-io.scm (rust-pest-meta-2.1): Update to 2.1.2.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-21 16:23:59 +02:00
John Soo
2760345fe9
gnu: rust-pest-meta-2.1: Update dependencies. 
* gnu/packages/crates-io.scm (rust-pest-meta-2.1)[arguments]: Move
rust-sha-1-0.8 from cargo-development-inputs to cargo-inputs.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-21 16:23:58 +02:00
John Soo
b94c6ac38e
gnu: rust-pest-generator-2.1: Update dependencies. 
* gnu/packages/crates-io.scm (rust-pest-generator-2.1)[arguments]:
Replace rust-quote-1.0 with 0.6 in cargo-inputs.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-21 16:23:58 +02:00
John Soo
04d924db0c
gnu: Add rust-jobserver-0.1. 
* gnu/packages/crates-io.scm (rust-jobserver-0.1): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-21 16:23:58 +02:00
John Soo
66d4d23a0d
gnu: Add rust-tokio-core-0.1. 
* gnu/packages/crates-io.scm (rust-tokio-core-0.1): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-21 16:23:58 +02:00
Efraim Flashner
7353994bad
gnu: Add rust-quickcheck-0.6. 
* gnu/packages/crates-io.scm (rust-quickcheck-0.6): New variable.
 2020-01-21 16:23:58 +02:00
Efraim Flashner
010ea34f7d
gnu: Add rust-regex-syntax-0.5. 
* gnu/packages/crates-io.scm (rust-regex-syntax-0.5): New variable.
 2020-01-21 16:23:57 +02:00
Efraim Flashner
790c528525
gnu: Add rust-rand-core-0.2. 
* gnu/packages/crates-io.scm (rust-rand-core-0.2): New variable.
 2020-01-21 16:23:57 +02:00
Efraim Flashner
54af2e59e2
gnu: Add rust-env-logger-0.5. 
* gnu/packages/crates-io.scm (rust-env-logger-0.5): New variable.
 2020-01-21 16:23:57 +02:00
Efraim Flashner
efbfc7e86c
gnu: Add rust-quickcheck-0.7. 
* gnu/packages/crates-io.scm (rust-quickcheck-0.7): New variable.
 2020-01-21 16:23:57 +02:00
Efraim Flashner
d304015f22
gnu: Add rust-aho-corasick-0.6. 
* gnu/packages/crates-io.scm (rust-aho-corasick-0.6.): New variable.
 2020-01-21 16:23:57 +02:00
Efraim Flashner
5381d5c49f
gnu: Add rust-regex-0.2. 
* gnu/packages/crates-io.scm (rust-regex-0.2): New variable.
 2020-01-21 16:23:56 +02:00
Efraim Flashner
2f1fe591d1
gnu: Add rust-env-logger-0.4. 
* gnu/packages/crates-io.scm (rust-env-logger-0.4): New variable.
 2020-01-21 16:23:56 +02:00
John Soo
272004aee5
gnu: Add rust-mio-named-pipes-0.1. 
* gnu/packages/crates-io.scm (rust-mio-named-pipes-0.1): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-21 16:23:56 +02:00
John Soo
7fcc421e8a
gnu: Add rust-tokio-process-0.2. 
* gnu/packages/crates-io.scm (rust-tokio-process-0.2): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-21 16:23:56 +02:00
John Soo
874a5bc61d
gnu: Add rust-tokio-signal-0.2. 
* gnu/packages/crates-io.scm (rust-tokio-signal-0.2): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-21 16:23:56 +02:00
John Soo
8eeb7794ba
gnu: rust-cc-1.0: Update to 1.0.50. 
* gnu/packages/crates-io.scm (rust-cc-1.0): Update to 1.0.50.
[arguments]: Remove rust-rayon-1.1 from cargo-inputs, add
rust-jobserver-0.1. Remove rust-tempdir-0.3 from
cargo-development-inputs, add rust-tempfile-3.1.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-21 16:23:55 +02:00
John Soo
a62d3de704
gnu: rust-quick-error-1.2: Don't hide package. 
* gnu/packages/crates-io.scm (rust-quick-error-1.2)[arguments]: Skip build.
[properties] Remove field.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-21 16:23:55 +02:00
John Soo
b72648d7f5
gnu: rust-quick-error-1.2: Update to 1.2.3. 
* gnu/packages/crates-io.scm (rust-quick-error-1.2): Update to 1.2.3.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-21 16:23:55 +02:00
Efraim Flashner
922b65d05e
gnu: Add rust-rand-0.5. 
* gnu/packages/crates-io.scm (rust-rand-0.5): New variable.
 2020-01-21 16:23:55 +02:00
John Soo
5e5ca33cd9
gnu: Add rust-hashbrown-0.5. 
* gnu/packages/crates-io.scm (rust-hashbrown-0.5): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-21 16:23:55 +02:00
John Soo
c0e73f92ba
gnu: Add rust-rustc-std-workspace-alloc-1.0. 
* gnu/packages/crates-io.scm (rust-rustc-std-workspace-alloc-1.0): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-21 16:23:54 +02:00
John Soo
ef2f6487d7
gnu: rust-regex-syntax-0.6: Update to 0.6.13. 
* gnu/packages/crates-io.scm (rust-regex-syntax-0.6): Update to 0.6.13.
[arguments]: Remove rust-ucd-util-0.1 from cargo-inputs.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-21 16:23:54 +02:00
John Soo
21f887c355
gnu: rust-serde-derive-1.0: Update to 1.0.104. 
* gnu/packages/crates-io.scm (rust-serde-derive-1.0): Update it.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-21 16:23:54 +02:00
John Soo
77a164a723
gnu: Add rust-argon2rs-0.2. 
* gnu/packages/crates-io.scm (rust-argon2rs-0.2): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-21 16:23:54 +02:00
John Soo
7a7ff5d36c
gnu: Add rust-term-size-0.3. 
* gnu/packages/crates-io.scm (rust-term-size-0.3): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-21 16:23:54 +02:00
John Soo
5a9e88c7d1
gnu: Add rust-term-size-1.0. 
* gnu/packages/crates-io.scm (rust-term-size-1.0): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-21 16:23:53 +02:00
John Soo
b43885e9e2
gnu: Add rust-redox-users-0.3. 
* gnu/packages/crates-io.scm (rust-redox-users-0.3): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-21 16:23:53 +02:00
John Soo
e320b20650
gnu: Add rust-blake2-rfc-0.2. 
* gnu/packages/crates-io.scm (rust-blake2-rfc-0.2): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-21 16:23:53 +02:00
John Soo
cb806c7c63
gnu: Add rust-dirs-sys-0.3. 
* gnu/packages/crates-io.scm (rust-dirs-sys-0.3): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-21 16:23:53 +02:00
John Soo
b6510b1a62
gnu: rust-serde-yaml-0.8: Update to 0.8.11. 
* gnu/packages/crates-io.scm (rust-serde-yaml-0.8): Update to 0.8.11.
[arguments]: Remove rust-version-sync-0.8 from cargo-development-inputs.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-21 16:23:53 +02:00
John Soo
ea78979dd4
gnu: rust-serde-json-1.0: Update to 1.0.44. 
* gnu/packages/crates-io.scm (rust-serde-json-1.0): Update to 1.0.44.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-21 16:23:52 +02:00
John Soo
ec438ab295
gnu: rust-serde-cbor-0.10: Update to 0.10.2. 
* gnu/packages/crates-io.scm (rust-serde-cbor-0.10): Update 0.10.2.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-21 16:23:52 +02:00
John Soo
27f158ef23
gnu: rust-serde-1.0: Update to 1.0.104. 
* gnu/packages/crates-io.scm (rust-serde-1.0): Update to 1.0.104.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-21 16:23:52 +02:00
John Soo
30b36e524a
gnu: Add rust-dirs-2.0. 
* gnu/packages/crates-io.scm (rust-dirs-2.0): New variable.
(rust-dirs-1.0): Inherit from rust-dirs-2.0.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-21 16:23:52 +02:00
John Soo
39bb7b29d9
gnu: Add rust-regex-1.3. 
* gnu/packages/crates-io.scm (rust-regex-1.3): New variable.
(rust-regex-1.1): Inherit from rust-regex-1.3.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-21 16:23:52 +02:00
John Soo
04020a73b3
gnu: Add rust-handlebars-2.0. 
* gnu/packages/crates-io.scm (rust-handlebars-2.0): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-21 16:23:48 +02:00
Ludovic Courtès
5dc6d5ce99
gnu: upower: Install 'dbus-1/system.d/org.freedesktop.UPower.conf' to etc/. 
Fixes <https://bugs.gnu.org/39203>.
Reported by Jesse Gibbons <jgibbons2357@gmail.com>.

* gnu/packages/gnome.scm (upower)[source]: Add 'modules' and 'snippet'.
 2020-01-21 15:01:46 +01:00
Tobias Geerinckx-Rice
a19fb6a436
gnu: Use HTTPS for (gnu packages bioinformatics) home pages. 
* gnu/packages/bioinformatics (bamm, ribodiff, python-biopython)
(discrover, hisat, hisat2, htseq, fastqc, htslib, python2-pbcore, roary)
(sortmerna, r-qtl, multiqc, r-deseq, r-fastseg, sambamba, trim-galore)
(gess, kentutils, bismark, kallisto, sailfish, python-hicexplorer)
(pplacer, python2-checkm-genome, r-velocyto)[home-page]: Use HTTPS.
 2020-01-21 02:15:32 +01:00
Tobias Geerinckx-Rice
72607005e4
gnu: r-gage: Update home page. 
* gnu/packages/bioinformatics.scm (r-gage)[home-page]: Update.
 2020-01-21 02:15:32 +01:00
Tobias Geerinckx-Rice
0388046068
gnu: sra-tools: Update home page. 
* gnu/packages/bioinformatics.scm (sra-tools)[home-page]: Update.
 2020-01-21 02:15:31 +01:00
Tobias Geerinckx-Rice
0eeaf1ac3c
gnu: raxml: Update home page. 
* gnu/packages/bioinformatics.scm (raxml)[home-page]: Update.
 2020-01-21 02:15:31 +01:00
Tobias Geerinckx-Rice
5832b88c45
gnu: prodigal: Update home page. 
* gnu/packages/bioinformatics.scm (prodigal)[home-page]: Use source code repository as home page.
 2020-01-21 02:15:31 +01:00
Tobias Geerinckx-Rice
030fe2fb7e
gnu: miso: Update home page. 
* gnu/packages/bioinformatics.scm (miso)[home-page]: Update.
 2020-01-21 02:15:31 +01:00
Tobias Geerinckx-Rice
b725655fce
gnu: grit: Update home page. 
* gnu/packages/bioinformatics.scm (grit)[home-page]: Use source code
repository as home page.
 2020-01-21 02:15:31 +01:00
Tobias Geerinckx-Rice
b56f2b6366
gnu: express-beta-diversity: Update home page. 
The original is not coming back:
<https://github.com/dparks1134/ExpressBetaDiversity/issues/11>.

* gnu/packages/bioinformatics.scm (express-beta-diversity)[home-page]:
Use source code repository as home page.
 2020-01-21 02:15:31 +01:00
Tobias Geerinckx-Rice
568bd2e382
gnu: dendropy: Update home page. 
* gnu/packages/bioinformatics.scm (dendropy)[home-page]: Update.
 2020-01-21 02:15:31 +01:00
Julien Lepiller
5aa573d8c7
gnu: ocaml-markup: Update to 0.8.2. 
gnu/packages/ocaml.scm (ocaml-markup): Update to 0.8.2.
 2020-01-21 01:12:26 +01:00
Julien Lepiller
16829d3b8a
gnu: ocaml-lwt: Update to 5.1.1. 
* gnu/packages/ocaml.scm (ocaml-lwt): update to 5.1.1.
 2020-01-21 01:12:05 +01:00
Julien Lepiller
2624921a64
gnu: Add ocaml-mmap. 
* gnu/packages/ocaml.scm (ocaml-mmap): New variable.
 2020-01-21 01:11:39 +01:00
Julien Lepiller
2e038f36f8
gnu: ocaml-bisect-ppx: Update to 1.4.2. 
* gnu/packages/ocaml.scm (ocaml-bisect-ppx): Update to 1.4.2.
 2020-01-21 01:11:35 +01:00
Julien Lepiller
73e01ae456
gnu: ocaml-qtest. Update to 2.10.1. 
* gnu/packages/ocaml.scm (ocaml-qtest): Update to 2.10.1.
 2020-01-21 01:11:31 +01:00
Julien Lepiller
795cf2a3b5
gnu: ocaml-qcheck: Update to 0.12. 
* gnu/packages/ocaml.scm (ocaml-qcheck): Update to 0.12.
 2020-01-21 01:11:20 +01:00
Julien Lepiller
c2eb8c7ef7
gnu: camlp5: Update to 7.10. 
* gnu/packages/ocaml.scm (camlp5): Upadte to 7.10.
 2020-01-21 01:10:49 +01:00
Julien Lepiller
efeda080ef
gnu: opam: Update to 2.0.6. 
* gnu/pckages/ocaml.scm (opam): Update to 2.0.6.
 2020-01-21 01:10:42 +01:00
Tobias Geerinckx-Rice
99db6db7be
gnu: Use HTTPS for bioconductor.org. 
* gnu/packages/bioinformatics.scm (r-homo-sapiens)[source]: Use HTTPS.
* gnu/packages/bioconductor.scm (r-bsgenome-mmusculus-ucsc-mm9-masked,
r-cghcall, r-diffbind, r-cghbase, r-ripseeker, r-chippeakanno,
r-qdnaseq, r-marray, r-multtest)[home-page]: Likewise.
* gnu/packages/graph.scm (r-rgraphviz)[home-page]: Likewise.
 2020-01-21 00:43:39 +01:00
Tobias Geerinckx-Rice
570b89f401
gnu: gzdoom: Update to 4.3.2. 
* gnu/packages/games.scm (gzdoom): Update to 4.3.2.
[source]: Use GIT-FETCH and GIT-FILE-NAME.  Apply system libgme patch.
Update snippet.
[arguments]: Allow system libgme.  Update substitution file names.
[inputs]: Use fluidsynth@2.
* gnu/packages/patches/gzdoom-find-system-libgme.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2020-01-21 00:43:24 +01:00
Tobias Geerinckx-Rice
21e733ce4e
gnu: supercollider: Update to 3.10.4. 
* gnu/packages/audio.scm (supercollider): Update to 3.10.4.
[source]: Remove patch.
* gnu/packages/patches/supercollider-boost-1.70-build-fix.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2020-01-21 00:43:24 +01:00
Ricardo Wurmus
fa730a9780
Revert "gnu: Add guile3.0-commonmark." 
This reverts commit 346386f3f7.

A Guile 3.0 variant had already been added with commit
1fa3423236.
 2020-01-21 00:05:50 +01:00
Ricardo Wurmus
77c95ee60c
gnu: Add guile3.0-pfds. 
* gnu/packages/guile-xyz.scm (guile3.0-pfds): New variable.
 2020-01-20 23:49:53 +01:00
Ricardo Wurmus
b0b725ed40
gnu: Add guile3.0-wisp. 
* gnu/packages/guile-xyz.scm (guile3.0-wisp): New variable.
 2020-01-20 23:49:53 +01:00
Ricardo Wurmus
346386f3f7
gnu: Add guile3.0-commonmark. 
* gnu/packages/guile-xyz.scm (guile3.0-commonmark): New variable.
(guile-commonmark)[arguments]: Patch configure file.
 2020-01-20 23:49:52 +01:00
Marius Bakke
c450ee9755
gnu: python-gst: Build with Meson. 
* gnu/packages/gstreamer.scm (python-gst)[build-system]: Change to MESON-BUILD-SYSTEM.
[arguments]: Adjust accordingly.
 2020-01-20 23:18:49 +01:00
Marius Bakke
4bebd7e4e6
gnu: gst-libav: Build with Meson. 
* gnu/packages/gstreamer.scm (gst-libav)[build-system]: Change to MESON-BUILD-SYSTEM.
[arguments]: Remove.
 2020-01-20 23:18:49 +01:00
Marius Bakke
1bf1e32b01
gnu: gst-plugins-ugly: Build with Meson. 
* gnu/packages/gstreamer.scm (gst-plugins-ugly)[build-system]: Change to
MESON-BUILD-SYSTEM.
 2020-01-20 23:18:49 +01:00
Marius Bakke
2dc277dd99
gnu: gst-plugins-bad: Build with Meson. 
* gnu/packages/gstreamer.scm (gst-plugins-bad)[outputs]: Remove.
[build-system]: Change to MESON-BUILD-SYSTEM.
[arguments]: Enable tests, except for one.  Disable documentation generation.
 2020-01-20 23:18:48 +01:00
Marius Bakke
321f47c25d
gnu: gst-plugins-good: Build with Meson. 
* gnu/packages/gstreamer.scm (gst-plugins-good)[build-system]: Change to
MESON-BUILD-SYSTEM.
 2020-01-20 23:18:48 +01:00
Marius Bakke
738923b6e3
gnu: gst-plugins-base: Build with Meson. 
* gnu/packages/gstreamer.scm (gst-plugins-base)[build-system]: Change to
MESON-BUILD-SYSTEM.
[outputs]: Remove.
[arguments]: Enable parallel tests.  Disable doc generation and Mesa dependency.
 2020-01-20 23:18:48 +01:00
Marius Bakke
9792adaa61
gnu: gstreamer: Build with Meson. 
The package fails to build with GNU Make 4.3, and upstream no longer supports
autotools.

* gnu/packages/gstreamer.scm (gstreamer)[build-system]: Change to
MESON-BUILD-SYSTEM.
[arguments]: Remove #:configure-flags.  Add #:phases.
[native-inputs]: Add GTK-DOC.
 2020-01-20 23:18:48 +01:00
Marius Bakke
25623647e9
gnu: guile-git: Update to 0.3.0. 
* gnu/packages/guile.scm (guile-git): Update to 0.3.0.
[source]: Download tarball with URL-FETCH.
[source](file-name, modules, snippet): Remove.
[native-inputs]: Remove AUTOCONF, AUTOMAKE and TEXINFO.
 2020-01-20 21:53:53 +01:00
Marius Bakke
89595f98d0
gnu: qt@4: Build with libjpeg-turbo. 
* gnu/packages/qt.scm (qt-4)[inputs]: Change from LIBJPEG-8 to LIBJPEG-TURBO.
 2020-01-20 21:53:52 +01:00
Marius Bakke
96738cb11f
gnu: stepmania: Build with libjpeg-turbo. 
* gnu/packages/games.scm (stepmania)[inputs]: Change from LIBJPEG-8 to
LIBJPEG-TURBO.
 2020-01-20 21:53:52 +01:00
Marius Bakke
7b24b76b98
gnu: mame: Build with libjpeg-turbo. 
* gnu/packages/emulators.scm (mame)[inputs]: Change from LIBJPEG-8 to
LIBJPEG-TURBO.
 2020-01-20 21:53:52 +01:00
Marius Bakke
43987c977c
gnu: mailutils: Update to 3.8. 
* gnu/packages/mail.scm (mailutils): Update to 3.8.
[arguments]: Adjust substitutions.
 2020-01-20 21:53:52 +01:00
Marius Bakke
37f4454734
gnu: xorg-server: Update to 1.20.7. 
* gnu/packages/xorg.scm (xorg-server): Update to 1.20.7.
 2020-01-20 21:53:52 +01:00
Marius Bakke
d18116d9b5
gnu: libsrtp: Build shared library. 
* gnu/packages/telephony.scm (libsrtp)[arguments]: Add #:phases.
 2020-01-20 21:53:52 +01:00
Marius Bakke
80af75abcf
gnu: libsrtp: Update to 2.3.0. 
* gnu/packages/telephony.scm (libsrtp): Update to 2.3.0.
 2020-01-20 21:53:52 +01:00
Marius Bakke
fd4b27e4e4
gnu: ffmpeg: Update to 4.2.2. 
* gnu/packages/video.scm (ffmpeg): Update to 4.2.2.
 2020-01-20 21:53:51 +01:00
Marius Bakke
0fd80a2556
gnu: libvpx: Update to 1.8.2. 
* gnu/packages/video.scm (libvpx): Update to 1.8.2.
 2020-01-20 21:53:51 +01:00
Marius Bakke
bb06336e81
gnu: re2: Update to 2020-01-01. 
* gnu/packages/regex.scm (re2): Update to 2020-01-01.
 2020-01-20 21:53:51 +01:00
Marius Bakke
07b1d40899
gnu: e2fsprogs: Update to 1.45.5. 
* gnu/packages/linux.scm (e2fsprogs): Update to 1.45.5.
 2020-01-20 21:53:51 +01:00
Marius Bakke
a5407c768d
gnu: snappy: Update to 1.1.8. 
* gnu/packages/compression.scm (snappy): Update to 1.1.8.
 2020-01-20 21:53:51 +01:00
Marius Bakke
ae3909eb4c
gnu: python-parameterized: Update to 0.7.1. 
* gnu/packages/patches/python2-parameterized-docstring-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/check.scm (python-parameterized): Update to 0.7.1.
[arguments]: Remove #:tests?.  Add #:phases to override 'check' phase.
[native-inputs]: Add PYTHON-MOCK and PYTHON-NOSE.
[properties]: New field.
(python2-parameterized)[source](patches): New field.
 2020-01-20 21:53:51 +01:00
Marius Bakke
544ea9c2df
gnu: Add python-anytree. 
* gnu/packages/python-xyz.scm (python-anytree): New public variable.
 2020-01-20 21:53:51 +01:00
Marius Bakke
20bf58bff4
gnu: python-packaging: Add comment about upstream patch status. 
* gnu/packages/python-xyz.scm (python-packaging)[source]: Add comment, to
prevent needless rebuild by updating the patch directly.
 2020-01-20 21:53:50 +01:00
Christopher Baines
aa10ad7d46
gnu: guix-data-service: Update to 0.0.1-17.bf25a8d. 
* gnu/packages/web.scm (guix-data-service): Update to 0.0.1-17.bf25a8d.
 2020-01-20 20:32:24 +00:00
Efraim Flashner
9448d0effc
gnu: rust-crossbeam-channel-0.3: Update to 0.3.9. 
* gnu/packages/crates-io.scm (rust-crossbeam-channel-0.3)[arguments]:
Remove rust-smallvec-0.6 from cargo-inputs. Add rust-rust-num-cpus-1.10
to cargo-development-inputs. Replace rust-rand-0.4 with 0.6.
 2020-01-20 17:28:45 +02:00
John Soo
b42899c29c
gnu: Add rust-crossbeam-channel-0.4. 
* gnu/packages/crates-io.scm (rust-crossbeam-channel-0.4): New variable.
(rust-crossbeam-channel-0.3): Inherit from rust-crossbeam-channel-0.4.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-20 17:24:17 +02:00
John Soo
2cd2cb2b92
gnu: rust-grep-searcher-0.1: Update to 0.1.6. 
* gnu/packages/crates-io.scm (rust-grep-searcher-0.1): Update to 0.1.6.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-20 17:23:13 +02:00
John Soo
8328cf2640
gnu: Add rust-env-logger-0.7. 
* gnu/packages/crates-io.scm (rust-env-logger-0.7): New variable.
(rust-env-logger-0.6): Inherit from rust-env-logger-0.7.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-20 17:22:15 +02:00
John Soo
7e7fd7fadc
gnu: Add rust-humantime-1.3. 
* gnu/packages/crates-io.scm (rust-humantime-1.3): New variable.
(rust-humantime-1.2): Inherit from rust-humantime-1.3.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-20 17:20:41 +02:00
John Soo
a842e36259
gnu: Add rust-lazy-static-1.4. 
* gnu/packages/crates-io.scm (rust-lazy-static-1.4): New variable.
(rust-lazy-static-1.3): Inherit from rust-lazy-static-1.4.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-20 17:20:28 +02:00
John Soo
166aca480e
gnu: Add rust-hex-0.4. 
* gnu/packages/crates-io.scm (rust-hex-0.4): New variable.
(rust-hex-0.3): Inherit from rust-hex-0.4.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-20 17:20:10 +02:00
John Soo
2157f749ec
gnu: rust-memchr-2.2: Update to 2.2.1. 
* gnu/packages/crates-io.scm (rust-memchr-2.2): Update to 2.2.1.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-20 17:14:55 +02:00
John Soo
1ff4d9cbca
gnu: rust-toml-0.5: Update to 0.5.6. 
* gnu/packages/crates-io.scm (rust-toml-0.5): Update to 0.5.6.
[arguments]: Skip build. Add rust-indexmap-1.0, rust-serde-1.0 to
cargo-inputs. Add rust-serde-derive-1.0, rust-serde-json-1.0 to
cargo-development-inputs.
[properties]: Remove field.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-20 16:45:04 +02:00
John Soo
b1ae24c9a4
gnu: Add rust-tempfile-3.1. 
* gnu/packages/crates-io.scm (rust-tempfile-3.1): New variable.
(rust-tempfile-3.0): Inherit from rust-tempfile-3.1.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-20 16:44:12 +02:00
John Soo
a3c031ce43
gnu: Add rust-git2-0.11. 
* gnu/packages/crates-io.scm (rust-git2-0.11): New variable.
(rust-git2-0.9): Inherit from rust-git2-0.11.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-20 16:43:35 +02:00
John Soo
f949981b78
gnu: Add rust-url-2.1. 
* gnu/packages/crates-io.scm (rust-url-2.1): New variable.
(rust-url-1.7): Inherit from rust-url-2.1.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-20 16:42:38 +02:00
Efraim Flashner
101aa648d3
gnu: rust-time-0.1: Update to 0.1.42. 
* gnu/packages/crates-io.scm (rust-time-0.1): Update to 0.1.42.
[arguments]: Replace rust-log-0.3 with 0.4 in cargo-development-inputs.
 2020-01-20 16:42:15 +02:00
John Soo
4fbc679a13
gnu: rust-time-0.1: Don't hide package. 
* gnu/packages/crates-io.scm (rust-time-0.1)[arguments]: Skip build. Add
rust-libc-0.2, rust-redox-syscall-0.1, rust-rustc-serialize-0.3,
rust-winapi-0.3 to cargo-inputs. Add rust-log-0.3, rust-winapi-0.3 to
cargo-development-inputs.
[home-page] Update url.
[properties] Remove field.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-20 16:42:15 +02:00
John Soo
cd088ebe89
gnu: Add rust-idna-0.2. 
* gnu/packages/crates-io.scm (rust-idna-0.2): New variable.
(rust-idna-0.1): Inherit from rust-idna-0.2.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-20 16:42:15 +02:00
John Soo
28c006321f
gnu: rust-rustc-test-0.3: Correct cargo-inputs. 
* gnu/packages/crates-io.scm (rust-rustc-test-0.3)[arguments]: Replace
rust-term-0.5 with 0.4 in cargo-inputs. Move rust-rustc-version-0.2 from
cargo-development-inputs to cargo-inputs.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-20 16:42:15 +02:00
John Soo
a9fd04214b
gnu: rust-term-0.5: Don't hide package. 
* gnu/packages/crates-io.scm (rust-term-0.5):[arguments] Skip build.
Add rust-byteorder-1.3, rust-dirs-1.0, rust-winapi-0.3 to cargo-inputs.
[properties] Remove field.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-20 16:42:15 +02:00
John Soo
91d81ab248
gnu: rust-term-0.4: Don't hide package. 
* gnu/packages/crates-io.scm (rust-term-0.4): [arguments] Skip build.
Add rust-kernel32-sys-0.2, rust-winapi-0.2 to cargo-inputs.
[properties]: Don't inherit field.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-20 16:42:14 +02:00
John Soo
89e4d2ccdb
gnu: Add rust-rand-0.7. 
* gnu/packages/crates-io.scm (rust-rand-0.7): New variable.
(rust-rand-0.6): Inherit from rust-rand-0.7.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-20 16:42:14 +02:00
John Soo
ad30f7dc01
gnu: Add rust-libgit2-sys-0.10. 
* gnu/packages/crates-io.scm (rust-libgit2-sys-0.10): New variable.
(rust-libgit2-sys-0.8): Inherit from rust-libgit2-sys-0.10.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-20 16:42:14 +02:00
John Soo
91b1ff7000
gnu: Add rust-rayon-1.3. 
* gnu/packages/crates-io.scm (rust-rayon-1.3): New variable.
(rust-rayon-1.1): Inherit from rust-rayon-1.3.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-20 16:42:14 +02:00
John Soo
eb3cf81cdd
gnu: Add rust-rayon-core-1.7. 
* gnu/packages/crates-io.scm (rust-rayon-core-1.7): New variable.
(rust-rayon-core-1.5): Inherit from rust-rayon-core-1.7.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-20 16:42:14 +02:00
Efraim Flashner
1261bc7ac8
gnu: rust-rand-pcg-0.2: Don't hide package. 
* gnu/packages/crates-io.scm (rust-rand-pcg-0.2)[arguments]: Skip build.
Add rust-rand-core-0.5, rust-serde-1.0 to cargo-inputs. Add
rust-bincode-1.1 to cargo-development-inputs.
[properties]: Remove field.
 2020-01-20 16:42:13 +02:00
Efraim Flashner
91107d058c
gnu: rust-rand-pcg-0.1: Don't hide package. 
* gnu/packages/crates-io.scm (rust-rand-pcg-0.1)[arguments]: Skip build.
Add rust-autocfg-0.1, rust-rand-core-0.4, rust-serde-1.0,
rust-serde-derive-1.0 to cargo-inputs. Add rust-bincode-1.1 to
cargo-development-inputs.
[properties]: Don't inherit field.
 2020-01-20 16:42:13 +02:00
John Soo
c060511f2f
gnu: Add rust-rand-pcg-0.2. 
* gnu/packages/crates-io.scm (rust-rand-pcg-0.2): New variable.
(rust-rand-pcg-0.1): Inherit from rust-rand-pcg-0.2.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-20 16:42:10 +02:00
Lars-Dominik Braun
a8ef4978f2
gnu: Add python-gssapi. 
* gnu/packages/python-xyz.scm (python-gssapi): New variable.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2020-01-20 20:50:24 +08:00
Lars-Dominik Braun
72c2478add
gnu: Add python-k5test. 
* gnu/packages/python-xyz.scm (python-k5test): New variable.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2020-01-20 20:50:24 +08:00
Lars-Dominik Braun
9786258b4d
gnu: Add python-shouldbe. 
* gnu/packages/python-xyz.scm (python-shouldbe): New variable.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2020-01-20 20:50:24 +08:00
Lars-Dominik Braun
84efaa3b8e
gnu: Add python-forbiddenfruit. 
* gnu/packages/python-xyz.scm (python-forbiddenfruit): New variable.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2020-01-20 20:50:24 +08:00
Guillaume Le Vaillant
d589f0d2bc
gnu: sbcl-ironclad: Update to 0.48. 
* gnu/packages/lisp-xyz.scm (sbcl-ironclad): Update to 0.48.
  [inputs]: Remove nibbles.
 2020-01-20 11:04:26 +01:00
John Soo
544fff4f43
gnu: Add rust-crossbeam-utils-0.7. 
* gnu/packages/crates-io.scm (rust-crossbeam-utils-0.7): New variable.
(rust-crossbeam-utils-0.6): Inherit from rust-crossbeam-utils-0.7.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-20 11:16:35 +02:00
John Soo
56beba471b
gnu: Add rust-rand-hc-0.2. 
* gnu/packages/crates-io.scm (rust-rand-hc-0.2): New variable.
(rust-rand-hc-0.1): Inherit from rust-rand-hc-0.2.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-20 11:16:35 +02:00
John Soo
2d92286de6
gnu: rust-rand-hc-0.1: Don't hide package. 
* gnu/packages/crates-io.scm (rust-rand-hc-0.1):[arguments] Skip build.
Add urst-rand-core-0.3 to cargo-inputs.
[properties] Remove field.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-20 11:16:34 +02:00
John Soo
812ce80ada
gnu: Update rust-rand-core-0.5 to 0.5.1. 
* gnu/packages/crates-io.scm (rust-rand-core-0.5): Update to 0.5.1.
[arguments]: Remove rust-serde-derive-1.0 from cargo-inputs.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-20 11:16:34 +02:00
John Soo
6b35ddf612
gnu: Update rust-rand-chacha-0.2 to 0.2.1. 
* gnu/packages/crates-io.scm (rust-rand-chacha-0.2): Update to 0.2.1.
[arguments]: Remove rust-autocfg-0.1 from cargo-development-inputs.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-20 11:16:34 +02:00
John Soo
bc3c2aacd3
gnu: Add rust-memoffset-0.5. 
* gnu/packages/crates-io.scm (rust-memoffset-0.5): New variable.
(rust-memoffset-0.2): Inherit from rust-memoffset-0.5.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-20 11:16:34 +02:00
John Soo
4edb32699e
gnu: Add rust-crossbeam-queue-0.2. 
* gnu/packages/crates-io.scm (rust-crossbeam-queue-0.2): New variable.
(rust-crossbeam-queue-0.1): Inherit from rust-crossbeam-queue-0.2.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-20 11:16:34 +02:00
John Soo
6f8794bd50
gnu: Update rust-crossbeam-deque to 0.7.2. 
* gnu/packages/crates-io.scm (rust-crossbeam-deque-0.7): Update to 0.7.2.
[arguments]: In cargo-inputs, replace rust-crossbeam-epoch-0.7 with 0.8,
rust-crossbeam-utils-0.6 with 0.7. In cargo-development-inputs, replace
rust-rand-0.4 with 0.6.
* gnu/packages/gnome.scm (librsvg-next)[source]: Don't replace
package-source for crossbeam-deque-0.7.

Co-authored-by: Efraim Flashner <efraim@flashner.co.il>
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-20 11:15:56 +02:00
John Soo
dd39f0acc9
gnu: Add rust-crossbeam-epoch-0.8. 
* gnu/packages/crates-io.scm (rust-crossbeam-epoch-0.8): New variable.
(rust-crossbeam-epoch-0.7): Inherit from rust-crossbeam-epoch-0.8.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-20 11:15:55 +02:00
Florian Pelz
17fe068ed7
gnu: USB_ModeSwitch data: Update to 20191128. 
* gnu/packages/usb-modeswitch.scm (usb-modeswitch-data): Update to 20191128.
[source] Use HTTPS.
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 2020-01-20 08:57:24 +00:00