Commit Graph

59411 Commits

Author SHA1 Message Date
zimoun
d115db7f7d
gnu: r-progeny: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-progeny): Update to 1.12.0.
2020-12-09 12:12:28 +01:00
zimoun
9834d1ab38
gnu: r-rbowtie2: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-rbowtie2): Update to 1.12.0.
2020-12-09 12:12:28 +01:00
zimoun
59fafa19f5
gnu: r-zfpkm: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-zfpkm): Update to 1.12.0.
2020-12-09 12:12:28 +01:00
zimoun
d176ad34d7
gnu: r-webbioc: Update to 1.62.0.
* gnu/packages/bioconductor.scm (r-webbioc): Update to 1.62.0.
2020-12-09 12:12:28 +01:00
zimoun
ba53681a46
gnu: r-widgettools: Update to 1.68.0.
* gnu/packages/bioconductor.scm (r-widgettools): Update to 1.68.0.
2020-12-09 12:12:28 +01:00
zimoun
397bcd2ccd
gnu: r-wiggleplotr: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-wiggleplotr): Update to 1.14.0.
2020-12-09 12:12:28 +01:00
zimoun
dc7c6368ed
gnu: r-wrench: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-wrench): Update to 1.8.0.
2020-12-09 12:12:28 +01:00
zimoun
a3af40eaf5
gnu: r-xcms: Update to 3.12.0.
* gnu/packages/bioconductor.scm (r-xcms): Update to 3.12.0.
[propagated-inputs]: Add r-mscoreutils.
2020-12-09 12:12:27 +01:00
zimoun
fa2201c108
gnu: Add r-mscoreutils.
* gnu/packages/bioconductor.scm (r-mscoreutils): New variable.
2020-12-09 12:12:27 +01:00
zimoun
1e536c307c
gnu: Update r-msnbase to 2.16.0.
* gnu/packages/bioinformatics.scm (r-msnbase): Update to 2.16.0.
2020-12-09 12:12:27 +01:00
zimoun
f4e19e62bb
gnu: r-massspecwavelet: Update to 1.56.0.
* gnu/packages/bioconductor.scm (r-massspecwavelet): Update to 1.56.0.
2020-12-09 12:12:27 +01:00
zimoun
7f71341e5d
gnu: r-xbseq: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-xbseq): Update to 1.22.0.
2020-12-09 12:12:27 +01:00
zimoun
72476adef5
gnu: r-roar: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-roar): Update to 1.26.0.
2020-12-09 12:12:27 +01:00
zimoun
94dee0af25
gnu: r-yaqcaffy: Update to 1.50.0.
* gnu/packages/bioconductor.scm (r-yaqcaffy): Update to 1.50.0.
2020-12-09 12:12:27 +01:00
zimoun
48aaef23b3
gnu: r-simpleaffy: Update to 2.66.0.
* gnu/packages/bioconductor.scm (r-simpleaffy): Update to 2.66.0.
2020-12-09 12:12:27 +01:00
zimoun
3d41f0c297
gnu: r-gcrma: Update to 2.62.0.
* gnu/packages/bioconductor.scm (r-gcrma): Update to 2.62.0.
2020-12-09 12:12:27 +01:00
zimoun
36f3a19ae6
gnu: r-somaticsignatures: Update to 2.26.0.
* gnu/packages/bioconductor.scm (r-somaticsignatures): Update to 2.26.0.
2020-12-09 12:12:27 +01:00
zimoun
0836ef6b69
gnu: r-gtrellis: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-gtrellis): Update to 1.22.0.
2020-12-09 12:12:27 +01:00
zimoun
65ba4ba5f1
gnu: r-yamss: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-yamss): Update to 1.16.0.
2020-12-09 12:12:27 +01:00
zimoun
ba0bf98dff
gnu: r-ebimage: Update to 4.32.0.
* gnu/packages/bioconductor.scm (r-ebimage): Update to 4.32.0.
2020-12-09 12:12:27 +01:00
zimoun
ff8b915377
gnu: r-aucell: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-aucell): Update to 1.12.0.
2020-12-09 12:12:26 +01:00
zimoun
85c6636bac
gnu: r-allelicimbalance: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-allelicimbalance): Update to 1.28.0.
2020-12-09 12:12:26 +01:00
zimoun
577915421d
gnu: r-annotationtools: Update to 1.64.0.
* gnu/packages/bioconductor.scm (r-annotationtools): Update to 1.64.0.
2020-12-09 12:12:26 +01:00
zimoun
bc12a4b660
gnu: r-annotationfuncs: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-annotationfuncs): Update to 1.40.0.
2020-12-09 12:12:26 +01:00
zimoun
8a7f7112f1
gnu: r-abaenrichment: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-abaenrichment): Update to 1.20.0.
2020-12-09 12:12:26 +01:00
zimoun
c3b69d6333
gnu: r-gofuncr: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-gofuncr): Update to 1.10.0.
2020-12-09 12:12:26 +01:00
zimoun
2ba61c67aa
gnu: r-atacseqqc: Update to 1.14.4.
* gnu/packages/bioconductor.scm (r-atacseqqc): Update to 1.14.4.
2020-12-09 12:12:26 +01:00
zimoun
392806183d
gnu: r-genomicscores: Update to 2.2.0.
* gnu/packages/bioconductor.scm (r-genomicscores): Update to 2.2.0.
2020-12-09 12:12:26 +01:00
zimoun
4b4cd2b8a2
gnu: r-motifstack: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-motifstack): Update to 1.34.0.
2020-12-09 12:12:26 +01:00
zimoun
301e549c22
gnu: r-motifbreakr: Update to 2.4.0.
* gnu/packages/bioconductor.scm (r-motifbreakr): Update to 2.4.0.
2020-12-09 12:12:26 +01:00
zimoun
a2bae16780
gnu: r-motifdb: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-motifdb): Update to 1.32.0.
2020-12-09 12:12:26 +01:00
zimoun
41071edcac
gnu: r-rgadem: Update to 2.38.0.
* gnu/packages/bioconductor.scm (r-rgadem): Update to 2.38.0.
2020-12-09 12:12:26 +01:00
zimoun
d5dcf1bb4b
gnu: r-bacon: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-bacon): Update to 1.18.0.
2020-12-09 12:12:26 +01:00
zimoun
8816139e84
gnu: r-abseqr: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-abseqr): Update to 1.8.0.
2020-12-09 12:12:26 +01:00
zimoun
68efaafe32
gnu: r-a4: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-a4): Update to 1.38.0.
2020-12-09 12:12:25 +01:00
zimoun
564d4279f2
gnu: r-a4base: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-a4base): Update to 1.38.0.
2020-12-09 12:12:25 +01:00
zimoun
2fb8298c80
gnu: r-a4reporting: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-a4reporting): Update to 1.38.0.
2020-12-09 12:12:25 +01:00
zimoun
85155e2ed9
gnu: r-a4preproc: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-a4preproc): Update to 1.38.0.
2020-12-09 12:12:25 +01:00
zimoun
fa51705f19
gnu: r-a4classif: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-a4classif): Update to 1.38.0.
2020-12-09 12:12:25 +01:00
zimoun
c47a8cd9e1
gnu: r-a4core: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-a4core): Update to 1.38.0.
2020-12-09 12:12:25 +01:00
zimoun
4f82931de4
gnu: r-mlinterfaces: Update to 1.70.0.
* gnu/packages/bioconductor.scm (r-mlinterfaces): Update to 1.70.0.
2020-12-09 12:12:25 +01:00
zimoun
3fd84a461d
gnu: r-clusterprofiler: Update to 3.18.0.
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 3.18.0.
2020-12-09 12:12:25 +01:00
Roel Janssen
eb3d17eb99
gnu: r-enrichplot: Update to 1.10.1.
* gnu/packages/bioconductor.scm (r-enrichplot): Update to 1.10.1.
[propagated-inputs]: Remove r-annotationdbi, r-europepmc, r-ggplotify,
r-ggridges, and r-gridextra; add r-magrittr and r-shadowtext.
2020-12-09 12:12:25 +01:00
Roel Janssen
b7d1ea7bfa
gnu: Add r-shadowtext.
* gnu/packages/cran.scm (r-shadowtext): New variable.
2020-12-09 12:12:25 +01:00
zimoun
aeb1d56f8f
gnu: r-dose: Update to 3.16.0.
* gnu/packages/bioconductor.scm (r-dose): Update to 3.16.0.
2020-12-09 12:12:25 +01:00
zimoun
d68a9ffa68
gnu: r-fgsea: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-fgsea): Update to 1.16.0.
2020-12-09 12:12:25 +01:00
zimoun
7dabc6298f
gnu: r-sigpathway: Update to 1.58.0.
* gnu/packages/bioconductor.scm (r-sigpathway): Update to 1.58.0.
2020-12-09 12:12:25 +01:00
zimoun
33c905b9c0
gnu: r-anota: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-anota): Update to 1.38.0.
2020-12-09 12:12:24 +01:00
zimoun
b2084e4d21
gnu: r-gosemsim: Update to 2.16.1.
* gnu/packages/bioconductor.scm (r-gosemsim): Update to 2.16.1.
2020-12-09 12:12:24 +01:00
zimoun
9813d24ddf
gnu: r-heatplus: Update to 2.36.0.
* gnu/packages/bioconductor.scm (r-heatplus): Update to 2.36.0.
2020-12-09 12:12:24 +01:00
zimoun
67837d4afe
gnu: r-varianttools: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-varianttools): Update to 1.32.0.
2020-12-09 12:12:24 +01:00
zimoun
2a1a6d74d6
gnu: r-ioniser: Update to 2.14.0.
* gnu/packages/bioconductor.scm (r-ioniser): Update to 2.14.0.
2020-12-09 12:12:24 +01:00
zimoun
37e09611f2
gnu: r-linnorm: Update to 2.14.0.
* gnu/packages/bioconductor.scm (r-linnorm): Update to 2.14.0.
2020-12-09 12:12:24 +01:00
zimoun
50c5fee6b5
gnu: r-bumphunter: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-bumphunter): Update to 1.32.0.
2020-12-09 12:12:24 +01:00
zimoun
0fd830feaa
gnu: r-siggenes: Update to 1.64.0.
* gnu/packages/bioconductor.scm (r-siggenes): Update to 1.64.0.
2020-12-09 12:12:24 +01:00
zimoun
e89966e977
gnu: r-illuminaio: Update to 0.32.0.
* gnu/packages/bioconductor.scm (r-illuminaio): Update to 0.32.0.
2020-12-09 12:12:24 +01:00
zimoun
5c4edeef02
gnu: r-geoquery: Update to 2.58.0.
* gnu/packages/bioconductor.scm (r-geoquery): Update to 2.58.0.
2020-12-09 12:12:24 +01:00
zimoun
bde9dc5b97
gnu: r-scone: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-scone): Update to 1.14.0.
2020-12-09 12:12:24 +01:00
zimoun
8396c45eda
gnu: r-noiseq: Update to 2.34.0.
* gnu/packages/bioconductor.scm (r-noiseq): Update to 2.34.0.
2020-12-09 12:12:24 +01:00
zimoun
38bc0bf808
gnu: r-monocle: Update to 2.18.0.
* gnu/packages/bioconductor.scm (r-monocle): Update to 2.18.0.
2020-12-09 12:12:24 +01:00
zimoun
532b106856
gnu: r-mast: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-mast): Update to 1.16.0.
2020-12-09 12:12:24 +01:00
zimoun
e26b5eefda
gnu: r-icobra: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-icobra): Update to 1.18.0.
2020-12-09 12:12:23 +01:00
zimoun
95b1f3507a
gnu: r-ihw: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-ihw): Update to 1.18.0.
2020-12-09 12:12:23 +01:00
zimoun
378d67c950
gnu: r-lpsymphony: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-lpsymphony): Update to 1.18.0.
2020-12-09 12:12:23 +01:00
zimoun
37da451316
gnu: r-karyoploter: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-karyoploter): Update to 1.16.0.
2020-12-09 12:12:23 +01:00
zimoun
939c888dac
gnu: r-ebseq: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-ebseq): Update to 1.30.0.
2020-12-09 12:12:23 +01:00
zimoun
850f4c2a36
gnu: r-dnacopy: Update to 1.64.0.
* gnu/packages/bioconductor.scm (r-dnacopy): Update to 1.64.0.
2020-12-09 12:12:23 +01:00
zimoun
43d8db0462
gnu: r-copynumber: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-copynumber): Update to 1.30.0.
2020-12-09 12:12:23 +01:00
zimoun
ff4d080422
gnu: r-chipexoqual: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-chipexoqual): Update to 1.14.0.
2020-12-09 12:12:23 +01:00
zimoun
967fc58392
gnu: r-savr: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-savr): Update to 1.28.0.
2020-12-09 12:12:23 +01:00
zimoun
4217307fb3
gnu: r-destiny: Update to 3.4.0.
* gnu/packages/bioconductor.scm (r-destiny): Update to 3.4.0.
[propagated-inputs]: Remove r-nbconvertr.
2020-12-09 12:12:23 +01:00
zimoun
bbae34aae7
gnu: r-biocneighbors: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-biocneighbors): Update to 1.8.0.
2020-12-09 12:12:23 +01:00
zimoun
a55b1622c5
gnu: r-ruvseq: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-ruvseq): Update to 1.24.0.
2020-12-09 12:12:23 +01:00
zimoun
874a774fcc
gnu: r-dnabarcodes: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-dnabarcodes): Update to 1.20.0.
2020-12-09 12:12:22 +01:00
zimoun
41d6b41feb
gnu: r-inspect: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-inspect): Update to 1.20.0.
2020-12-09 12:12:22 +01:00
zimoun
1c9bdfcf3c
gnu: r-plgem: Update to 1.62.0.
* gnu/packages/bioconductor.scm (r-plgem): Update to 1.62.0.
2020-12-09 12:12:22 +01:00
zimoun
0ef40b23b6
gnu: r-rots: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-rots): Update to 1.18.0.
2020-12-09 12:12:22 +01:00
zimoun
3dab4570fa
gnu: r-glimma: Update to 2.0.0.
* gnu/packages/bioconductor.scm (r-glimma): Update to 2.0.0.
2020-12-09 12:12:22 +01:00
zimoun
c97bcfbd78
gnu: r-goseq: Update to 1.42.0.
* gnu/packages/bioconductor.scm (r-goseq): Update to 1.42.0.
2020-12-09 12:12:22 +01:00
zimoun
d27dfbf7f9
gnu: r-ctc: Update to 1.64.0.
* gnu/packages/bioconductor.scm (r-ctc): Update to 1.64.0.
2020-12-09 12:12:22 +01:00
zimoun
3813c9fe56
gnu: r-riboseqr: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-riboseqr): Update to 1.24.0.
2020-12-09 12:12:22 +01:00
zimoun
03b655c524
gnu: r-riboprofiling: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-riboprofiling): Update to 1.20.0.
2020-12-09 12:12:22 +01:00
zimoun
63572b0c12
gnu: r-bayseq: Update to 2.24.0.
* gnu/packages/bioconductor.scm (r-bayseq): Update to 2.24.0.
2020-12-09 12:12:22 +01:00
zimoun
3b6484097c
gnu: r-qdnaseq: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-qdnaseq): Update to 1.26.0.
2020-12-09 12:12:22 +01:00
zimoun
724000356e
gnu: r-cghcall: Update to 2.52.0.
* gnu/packages/bioconductor.scm (r-cghcall): Update to 2.52.0.
2020-12-09 12:12:22 +01:00
zimoun
ee052d05f1
gnu: r-cghbase: Update to 1.50.0.
* gnu/packages/bioconductor.scm (r-cghbase): Update to 1.50.0.
2020-12-09 12:12:22 +01:00
zimoun
6e6c627230
gnu: r-marray: Update to 1.68.0.
* gnu/packages/bioconductor.scm (r-marray): Update to 1.68.0.
2020-12-09 12:12:22 +01:00
zimoun
d068d96743
gnu: r-chippeakanno: Update to 3.24.0.
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.24.0.
2020-12-09 12:12:21 +01:00
zimoun
f519b4dc01
gnu: r-graph: Update to 1.68.0.
* gnu/packages/bioconductor.scm (r-graph): Update to 1.68.0.
2020-12-09 12:12:21 +01:00
zimoun
1e6920c521
gnu: r-multtest: Update to 2.46.0.
* gnu/packages/bioconductor.scm (r-multtest): Update to 2.46.0.
2020-12-09 12:12:21 +01:00
Roel Janssen
341ebaaa01
gnu: r-diffbind: Update to 3.0.7.
* gnu/packages/bioconductor.scm (r-diffbind): Update to 3.0.7.
[propagated-inputs]: Add r-apeglm, r-ashr, and r-greylistchip; remove r-edger.
2020-12-09 12:12:21 +01:00
Roel Janssen
6e396c4bff
gnu: Add r-greylistchip.
* gnu/packages/bioconductor.scm (r-greylistchip): New variable.
2020-12-09 12:12:21 +01:00
Roel Janssen
c84762c446
gnu: Add r-ashr.
* gnu/packages/cran.scm (r-ashr): New variable.
2020-12-09 12:12:21 +01:00
Roel Janssen
755d16a3b0
gnu: Add r-mixsqp.
* gnu/packages/cran.scm (r-mixsqp): New variable.
2020-12-09 12:12:21 +01:00
Roel Janssen
deda2319f7
gnu: Add r-etrunct.
* gnu/packages/cran.scm (r-etrunct): New variable.
2020-12-09 12:12:21 +01:00
Roel Janssen
a7f4a8b4d0
gnu: Add r-invgamma.
* gnu/packages/cran.scm (r-invgamma): New variable.
2020-12-09 12:12:21 +01:00
Roel Janssen
3b399e514f
gnu: Add r-apeglm.
* gnu/packages/bioconductor.scm (r-apeglm): New variable.
2020-12-09 12:12:21 +01:00
Roel Janssen
a0df9b93ef
gnu: Add r-rcppnumerical.
* gnu/packages/bioconductor.scm (r-rcppnumerical): New variable.
2020-12-09 12:12:21 +01:00
zimoun
e9b60a2901
gnu: r-qvalue: Update to 2.22.0.
* gnu/packages/bioconductor.scm (r-qvalue): Update to 2.22.0.
2020-12-09 12:12:21 +01:00
zimoun
9af6fdf861
gnu: r-oligo: Update to 1.54.0.
* gnu/packages/bioconductor.scm (r-oligo): Update to 1.54.0.
2020-12-09 12:12:21 +01:00