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59447 Commits

Author SHA1 Message Date
zimoun
48aaef23b3
gnu: r-simpleaffy: Update to 2.66.0. 
* gnu/packages/bioconductor.scm (r-simpleaffy): Update to 2.66.0.
 2020-12-09 12:12:27 +01:00
zimoun
3d41f0c297
gnu: r-gcrma: Update to 2.62.0. 
* gnu/packages/bioconductor.scm (r-gcrma): Update to 2.62.0.
 2020-12-09 12:12:27 +01:00
zimoun
36f3a19ae6
gnu: r-somaticsignatures: Update to 2.26.0. 
* gnu/packages/bioconductor.scm (r-somaticsignatures): Update to 2.26.0.
 2020-12-09 12:12:27 +01:00
zimoun
0836ef6b69
gnu: r-gtrellis: Update to 1.22.0. 
* gnu/packages/bioconductor.scm (r-gtrellis): Update to 1.22.0.
 2020-12-09 12:12:27 +01:00
zimoun
65ba4ba5f1
gnu: r-yamss: Update to 1.16.0. 
* gnu/packages/bioconductor.scm (r-yamss): Update to 1.16.0.
 2020-12-09 12:12:27 +01:00
zimoun
ba0bf98dff
gnu: r-ebimage: Update to 4.32.0. 
* gnu/packages/bioconductor.scm (r-ebimage): Update to 4.32.0.
 2020-12-09 12:12:27 +01:00
zimoun
ff8b915377
gnu: r-aucell: Update to 1.12.0. 
* gnu/packages/bioconductor.scm (r-aucell): Update to 1.12.0.
 2020-12-09 12:12:26 +01:00
zimoun
85c6636bac
gnu: r-allelicimbalance: Update to 1.28.0. 
* gnu/packages/bioconductor.scm (r-allelicimbalance): Update to 1.28.0.
 2020-12-09 12:12:26 +01:00
zimoun
577915421d
gnu: r-annotationtools: Update to 1.64.0. 
* gnu/packages/bioconductor.scm (r-annotationtools): Update to 1.64.0.
 2020-12-09 12:12:26 +01:00
zimoun
bc12a4b660
gnu: r-annotationfuncs: Update to 1.40.0. 
* gnu/packages/bioconductor.scm (r-annotationfuncs): Update to 1.40.0.
 2020-12-09 12:12:26 +01:00
zimoun
8a7f7112f1
gnu: r-abaenrichment: Update to 1.20.0. 
* gnu/packages/bioconductor.scm (r-abaenrichment): Update to 1.20.0.
 2020-12-09 12:12:26 +01:00
zimoun
c3b69d6333
gnu: r-gofuncr: Update to 1.10.0. 
* gnu/packages/bioconductor.scm (r-gofuncr): Update to 1.10.0.
 2020-12-09 12:12:26 +01:00
zimoun
2ba61c67aa
gnu: r-atacseqqc: Update to 1.14.4. 
* gnu/packages/bioconductor.scm (r-atacseqqc): Update to 1.14.4.
 2020-12-09 12:12:26 +01:00
zimoun
392806183d
gnu: r-genomicscores: Update to 2.2.0. 
* gnu/packages/bioconductor.scm (r-genomicscores): Update to 2.2.0.
 2020-12-09 12:12:26 +01:00
zimoun
4b4cd2b8a2
gnu: r-motifstack: Update to 1.34.0. 
* gnu/packages/bioconductor.scm (r-motifstack): Update to 1.34.0.
 2020-12-09 12:12:26 +01:00
zimoun
301e549c22
gnu: r-motifbreakr: Update to 2.4.0. 
* gnu/packages/bioconductor.scm (r-motifbreakr): Update to 2.4.0.
 2020-12-09 12:12:26 +01:00
zimoun
a2bae16780
gnu: r-motifdb: Update to 1.32.0. 
* gnu/packages/bioconductor.scm (r-motifdb): Update to 1.32.0.
 2020-12-09 12:12:26 +01:00
zimoun
41071edcac
gnu: r-rgadem: Update to 2.38.0. 
* gnu/packages/bioconductor.scm (r-rgadem): Update to 2.38.0.
 2020-12-09 12:12:26 +01:00
zimoun
d5dcf1bb4b
gnu: r-bacon: Update to 1.18.0. 
* gnu/packages/bioconductor.scm (r-bacon): Update to 1.18.0.
 2020-12-09 12:12:26 +01:00
zimoun
8816139e84
gnu: r-abseqr: Update to 1.8.0. 
* gnu/packages/bioconductor.scm (r-abseqr): Update to 1.8.0.
 2020-12-09 12:12:26 +01:00
zimoun
68efaafe32
gnu: r-a4: Update to 1.38.0. 
* gnu/packages/bioconductor.scm (r-a4): Update to 1.38.0.
 2020-12-09 12:12:25 +01:00
zimoun
564d4279f2
gnu: r-a4base: Update to 1.38.0. 
* gnu/packages/bioconductor.scm (r-a4base): Update to 1.38.0.
 2020-12-09 12:12:25 +01:00
zimoun
2fb8298c80
gnu: r-a4reporting: Update to 1.38.0. 
* gnu/packages/bioconductor.scm (r-a4reporting): Update to 1.38.0.
 2020-12-09 12:12:25 +01:00
zimoun
85155e2ed9
gnu: r-a4preproc: Update to 1.38.0. 
* gnu/packages/bioconductor.scm (r-a4preproc): Update to 1.38.0.
 2020-12-09 12:12:25 +01:00
zimoun
fa51705f19
gnu: r-a4classif: Update to 1.38.0. 
* gnu/packages/bioconductor.scm (r-a4classif): Update to 1.38.0.
 2020-12-09 12:12:25 +01:00
zimoun
c47a8cd9e1
gnu: r-a4core: Update to 1.38.0. 
* gnu/packages/bioconductor.scm (r-a4core): Update to 1.38.0.
 2020-12-09 12:12:25 +01:00
zimoun
4f82931de4
gnu: r-mlinterfaces: Update to 1.70.0. 
* gnu/packages/bioconductor.scm (r-mlinterfaces): Update to 1.70.0.
 2020-12-09 12:12:25 +01:00
zimoun
3fd84a461d
gnu: r-clusterprofiler: Update to 3.18.0. 
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 3.18.0.
 2020-12-09 12:12:25 +01:00
Roel Janssen
eb3d17eb99
gnu: r-enrichplot: Update to 1.10.1. 
* gnu/packages/bioconductor.scm (r-enrichplot): Update to 1.10.1.
[propagated-inputs]: Remove r-annotationdbi, r-europepmc, r-ggplotify,
r-ggridges, and r-gridextra; add r-magrittr and r-shadowtext.
 2020-12-09 12:12:25 +01:00
Roel Janssen
b7d1ea7bfa
gnu: Add r-shadowtext. 
* gnu/packages/cran.scm (r-shadowtext): New variable.
 2020-12-09 12:12:25 +01:00
zimoun
aeb1d56f8f
gnu: r-dose: Update to 3.16.0. 
* gnu/packages/bioconductor.scm (r-dose): Update to 3.16.0.
 2020-12-09 12:12:25 +01:00
zimoun
d68a9ffa68
gnu: r-fgsea: Update to 1.16.0. 
* gnu/packages/bioconductor.scm (r-fgsea): Update to 1.16.0.
 2020-12-09 12:12:25 +01:00
zimoun
7dabc6298f
gnu: r-sigpathway: Update to 1.58.0. 
* gnu/packages/bioconductor.scm (r-sigpathway): Update to 1.58.0.
 2020-12-09 12:12:25 +01:00
zimoun
33c905b9c0
gnu: r-anota: Update to 1.38.0. 
* gnu/packages/bioconductor.scm (r-anota): Update to 1.38.0.
 2020-12-09 12:12:24 +01:00
zimoun
b2084e4d21
gnu: r-gosemsim: Update to 2.16.1. 
* gnu/packages/bioconductor.scm (r-gosemsim): Update to 2.16.1.
 2020-12-09 12:12:24 +01:00
zimoun
9813d24ddf
gnu: r-heatplus: Update to 2.36.0. 
* gnu/packages/bioconductor.scm (r-heatplus): Update to 2.36.0.
 2020-12-09 12:12:24 +01:00
zimoun
67837d4afe
gnu: r-varianttools: Update to 1.32.0. 
* gnu/packages/bioconductor.scm (r-varianttools): Update to 1.32.0.
 2020-12-09 12:12:24 +01:00
zimoun
2a1a6d74d6
gnu: r-ioniser: Update to 2.14.0. 
* gnu/packages/bioconductor.scm (r-ioniser): Update to 2.14.0.
 2020-12-09 12:12:24 +01:00
zimoun
37e09611f2
gnu: r-linnorm: Update to 2.14.0. 
* gnu/packages/bioconductor.scm (r-linnorm): Update to 2.14.0.
 2020-12-09 12:12:24 +01:00
zimoun
50c5fee6b5
gnu: r-bumphunter: Update to 1.32.0. 
* gnu/packages/bioconductor.scm (r-bumphunter): Update to 1.32.0.
 2020-12-09 12:12:24 +01:00
zimoun
0fd830feaa
gnu: r-siggenes: Update to 1.64.0. 
* gnu/packages/bioconductor.scm (r-siggenes): Update to 1.64.0.
 2020-12-09 12:12:24 +01:00
zimoun
e89966e977
gnu: r-illuminaio: Update to 0.32.0. 
* gnu/packages/bioconductor.scm (r-illuminaio): Update to 0.32.0.
 2020-12-09 12:12:24 +01:00
zimoun
5c4edeef02
gnu: r-geoquery: Update to 2.58.0. 
* gnu/packages/bioconductor.scm (r-geoquery): Update to 2.58.0.
 2020-12-09 12:12:24 +01:00
zimoun
bde9dc5b97
gnu: r-scone: Update to 1.14.0. 
* gnu/packages/bioconductor.scm (r-scone): Update to 1.14.0.
 2020-12-09 12:12:24 +01:00
zimoun
8396c45eda
gnu: r-noiseq: Update to 2.34.0. 
* gnu/packages/bioconductor.scm (r-noiseq): Update to 2.34.0.
 2020-12-09 12:12:24 +01:00
zimoun
38bc0bf808
gnu: r-monocle: Update to 2.18.0. 
* gnu/packages/bioconductor.scm (r-monocle): Update to 2.18.0.
 2020-12-09 12:12:24 +01:00
zimoun
532b106856
gnu: r-mast: Update to 1.16.0. 
* gnu/packages/bioconductor.scm (r-mast): Update to 1.16.0.
 2020-12-09 12:12:24 +01:00
zimoun
e26b5eefda
gnu: r-icobra: Update to 1.18.0. 
* gnu/packages/bioconductor.scm (r-icobra): Update to 1.18.0.
 2020-12-09 12:12:23 +01:00
zimoun
95b1f3507a
gnu: r-ihw: Update to 1.18.0. 
* gnu/packages/bioconductor.scm (r-ihw): Update to 1.18.0.
 2020-12-09 12:12:23 +01:00
zimoun
378d67c950
gnu: r-lpsymphony: Update to 1.18.0. 
* gnu/packages/bioconductor.scm (r-lpsymphony): Update to 1.18.0.
 2020-12-09 12:12:23 +01:00
zimoun
37da451316
gnu: r-karyoploter: Update to 1.16.0. 
* gnu/packages/bioconductor.scm (r-karyoploter): Update to 1.16.0.
 2020-12-09 12:12:23 +01:00
zimoun
939c888dac
gnu: r-ebseq: Update to 1.30.0. 
* gnu/packages/bioconductor.scm (r-ebseq): Update to 1.30.0.
 2020-12-09 12:12:23 +01:00
zimoun
850f4c2a36
gnu: r-dnacopy: Update to 1.64.0. 
* gnu/packages/bioconductor.scm (r-dnacopy): Update to 1.64.0.
 2020-12-09 12:12:23 +01:00
zimoun
43d8db0462
gnu: r-copynumber: Update to 1.30.0. 
* gnu/packages/bioconductor.scm (r-copynumber): Update to 1.30.0.
 2020-12-09 12:12:23 +01:00
zimoun
ff4d080422
gnu: r-chipexoqual: Update to 1.14.0. 
* gnu/packages/bioconductor.scm (r-chipexoqual): Update to 1.14.0.
 2020-12-09 12:12:23 +01:00
zimoun
967fc58392
gnu: r-savr: Update to 1.28.0. 
* gnu/packages/bioconductor.scm (r-savr): Update to 1.28.0.
 2020-12-09 12:12:23 +01:00
zimoun
4217307fb3
gnu: r-destiny: Update to 3.4.0. 
* gnu/packages/bioconductor.scm (r-destiny): Update to 3.4.0.
[propagated-inputs]: Remove r-nbconvertr.
 2020-12-09 12:12:23 +01:00
zimoun
bbae34aae7
gnu: r-biocneighbors: Update to 1.8.0. 
* gnu/packages/bioconductor.scm (r-biocneighbors): Update to 1.8.0.
 2020-12-09 12:12:23 +01:00
zimoun
a55b1622c5
gnu: r-ruvseq: Update to 1.24.0. 
* gnu/packages/bioconductor.scm (r-ruvseq): Update to 1.24.0.
 2020-12-09 12:12:23 +01:00
zimoun
874a774fcc
gnu: r-dnabarcodes: Update to 1.20.0. 
* gnu/packages/bioconductor.scm (r-dnabarcodes): Update to 1.20.0.
 2020-12-09 12:12:22 +01:00
zimoun
41d6b41feb
gnu: r-inspect: Update to 1.20.0. 
* gnu/packages/bioconductor.scm (r-inspect): Update to 1.20.0.
 2020-12-09 12:12:22 +01:00
zimoun
1c9bdfcf3c
gnu: r-plgem: Update to 1.62.0. 
* gnu/packages/bioconductor.scm (r-plgem): Update to 1.62.0.
 2020-12-09 12:12:22 +01:00
zimoun
0ef40b23b6
gnu: r-rots: Update to 1.18.0. 
* gnu/packages/bioconductor.scm (r-rots): Update to 1.18.0.
 2020-12-09 12:12:22 +01:00
zimoun
3dab4570fa
gnu: r-glimma: Update to 2.0.0. 
* gnu/packages/bioconductor.scm (r-glimma): Update to 2.0.0.
 2020-12-09 12:12:22 +01:00
zimoun
c97bcfbd78
gnu: r-goseq: Update to 1.42.0. 
* gnu/packages/bioconductor.scm (r-goseq): Update to 1.42.0.
 2020-12-09 12:12:22 +01:00
zimoun
d27dfbf7f9
gnu: r-ctc: Update to 1.64.0. 
* gnu/packages/bioconductor.scm (r-ctc): Update to 1.64.0.
 2020-12-09 12:12:22 +01:00
zimoun
3813c9fe56
gnu: r-riboseqr: Update to 1.24.0. 
* gnu/packages/bioconductor.scm (r-riboseqr): Update to 1.24.0.
 2020-12-09 12:12:22 +01:00
zimoun
03b655c524
gnu: r-riboprofiling: Update to 1.20.0. 
* gnu/packages/bioconductor.scm (r-riboprofiling): Update to 1.20.0.
 2020-12-09 12:12:22 +01:00
zimoun
63572b0c12
gnu: r-bayseq: Update to 2.24.0. 
* gnu/packages/bioconductor.scm (r-bayseq): Update to 2.24.0.
 2020-12-09 12:12:22 +01:00
zimoun
3b6484097c
gnu: r-qdnaseq: Update to 1.26.0. 
* gnu/packages/bioconductor.scm (r-qdnaseq): Update to 1.26.0.
 2020-12-09 12:12:22 +01:00
zimoun
724000356e
gnu: r-cghcall: Update to 2.52.0. 
* gnu/packages/bioconductor.scm (r-cghcall): Update to 2.52.0.
 2020-12-09 12:12:22 +01:00
zimoun
ee052d05f1
gnu: r-cghbase: Update to 1.50.0. 
* gnu/packages/bioconductor.scm (r-cghbase): Update to 1.50.0.
 2020-12-09 12:12:22 +01:00
zimoun
6e6c627230
gnu: r-marray: Update to 1.68.0. 
* gnu/packages/bioconductor.scm (r-marray): Update to 1.68.0.
 2020-12-09 12:12:22 +01:00
zimoun
d068d96743
gnu: r-chippeakanno: Update to 3.24.0. 
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.24.0.
 2020-12-09 12:12:21 +01:00
zimoun
f519b4dc01
gnu: r-graph: Update to 1.68.0. 
* gnu/packages/bioconductor.scm (r-graph): Update to 1.68.0.
 2020-12-09 12:12:21 +01:00
zimoun
1e6920c521
gnu: r-multtest: Update to 2.46.0. 
* gnu/packages/bioconductor.scm (r-multtest): Update to 2.46.0.
 2020-12-09 12:12:21 +01:00
Roel Janssen
341ebaaa01
gnu: r-diffbind: Update to 3.0.7. 
* gnu/packages/bioconductor.scm (r-diffbind): Update to 3.0.7.
[propagated-inputs]: Add r-apeglm, r-ashr, and r-greylistchip; remove r-edger.
 2020-12-09 12:12:21 +01:00
Roel Janssen
6e396c4bff
gnu: Add r-greylistchip. 
* gnu/packages/bioconductor.scm (r-greylistchip): New variable.
 2020-12-09 12:12:21 +01:00
Roel Janssen
c84762c446
gnu: Add r-ashr. 
* gnu/packages/cran.scm (r-ashr): New variable.
 2020-12-09 12:12:21 +01:00
Roel Janssen
755d16a3b0
gnu: Add r-mixsqp. 
* gnu/packages/cran.scm (r-mixsqp): New variable.
 2020-12-09 12:12:21 +01:00
Roel Janssen
deda2319f7
gnu: Add r-etrunct. 
* gnu/packages/cran.scm (r-etrunct): New variable.
 2020-12-09 12:12:21 +01:00
Roel Janssen
a7f4a8b4d0
gnu: Add r-invgamma. 
* gnu/packages/cran.scm (r-invgamma): New variable.
 2020-12-09 12:12:21 +01:00
Roel Janssen
3b399e514f
gnu: Add r-apeglm. 
* gnu/packages/bioconductor.scm (r-apeglm): New variable.
 2020-12-09 12:12:21 +01:00
Roel Janssen
a0df9b93ef
gnu: Add r-rcppnumerical. 
* gnu/packages/bioconductor.scm (r-rcppnumerical): New variable.
 2020-12-09 12:12:21 +01:00
zimoun
e9b60a2901
gnu: r-qvalue: Update to 2.22.0. 
* gnu/packages/bioconductor.scm (r-qvalue): Update to 2.22.0.
 2020-12-09 12:12:21 +01:00
zimoun
9af6fdf861
gnu: r-oligo: Update to 1.54.0. 
* gnu/packages/bioconductor.scm (r-oligo): Update to 1.54.0.
 2020-12-09 12:12:21 +01:00
zimoun
464df5ccbb
gnu: r-oligoclasses: Update to 1.52.0. 
* gnu/packages/bioconductor.scm (r-oligoclasses): Update to 1.52.0.
 2020-12-09 12:12:21 +01:00
zimoun
d72c4c98c8
gnu: r-geneplotter: Update to 1.68.0. 
* gnu/packages/bioconductor.scm (r-geneplotter): Update to 1.68.0.
 2020-12-09 12:12:20 +01:00
zimoun
c03c76344e
gnu: r-reportingtools: Update to 2.30.0. 
* gnu/packages/bioconductor.scm (r-reportingtools): Update to 2.30.0.
 2020-12-09 12:12:20 +01:00
zimoun
d1ff3604b7
gnu: r-regioner: Update to 1.22.0. 
* gnu/packages/bioconductor.scm (r-regioner): Update to 1.22.0.
 2020-12-09 12:12:20 +01:00
zimoun
fa7578b32f
gnu: r-hpar: Update to 1.32.1. 
* gnu/packages/bioconductor.scm (r-hpar): Update to 1.32.1.
 2020-12-09 12:12:20 +01:00
zimoun
7d56302332
gnu: r-annotate: Update to 1.68.0. 
* gnu/packages/bioconductor.scm (r-annotate): Update to 1.68.0.
[propagated-inputs]: Remove 'r-rcurl', add 'r-httr'.
 2020-12-09 12:12:20 +01:00
zimoun
8e6a2c328f
gnu: r-affxparser: Update to 1.62.0. 
* gnu/packages/bioconductor.scm (r-affxparser): Update to 1.62.0.
 2020-12-09 12:12:20 +01:00
zimoun
a92219b45f
gnu: r-affycoretools: Update to 1.62.0. 
* gnu/packages/bioconductor.scm (r-affycoretools): Update to 1.62.0.
 2020-12-09 12:12:20 +01:00
zimoun
3e82f9ccaf
gnu: r-affycontam: Update to 1.48.0. 
* gnu/packages/bioconductor.scm (r-affycontam): Update to 1.48.0.
 2020-12-09 12:12:20 +01:00
zimoun
fa2d16cc27
gnu: r-affycompatible: Update to 1.50.0. 
* gnu/packages/bioconductor.scm (r-affycompatible): Update to 1.50.0.
 2020-12-09 12:12:20 +01:00
zimoun
c472549f67
gnu: r-affycomp: Update to 1.66.0. 
* gnu/packages/bioconductor.scm (r-affycomp): Update to 1.66.0.
 2020-12-09 12:12:20 +01:00
zimoun
aa311eaa74
gnu: r-biocgenerics: Update to 0.36.0. 
* gnu/packages/bioconductor.scm (r-biocgenerics): Update to 0.36.0.
 2020-12-09 12:12:20 +01:00
zimoun
70ab99096d
gnu: r-biocversion: Update to 3.12.0. 
* gnu/packages/bioconductor.scm (r-biocversion): Update to 3.12.0.
 2020-12-09 12:12:20 +01:00
zimoun
a3e2e53837
gnu: r-cummerbund: Update to 2.32.0. 
* gnu/packages/bioconductor.scm (r-cummerbund): Update to 2.32.0.
 2020-12-09 12:12:20 +01:00
zimoun
5ef637ddc7
gnu: r-coverageview: Update to 1.28.0. 
* gnu/packages/bioconductor.scm (r-coverageview): Update to 1.28.0.
 2020-12-09 12:12:20 +01:00
zimoun
25f4e6520e
gnu: r-ideoviz: Update to 1.26.0. 
* gnu/packages/bioconductor.scm (r-ideoviz): Update to 1.26.0.
 2020-12-09 12:12:20 +01:00
Guillaume Le Vaillant
53c480006b
gnu: monero-gui: Update to 0.17.1.6. 
* gnu/packages/finance.scm (monero-gui): Update to 0.17.1.6.
 2020-12-09 11:34:25 +01:00
Guillaume Le Vaillant
5560bd7b6b
gnu: monero: Update to 0.17.1.6. 
* gnu/packages/finance.scm (monero): Update to 0.17.1.6.
 2020-12-09 11:34:25 +01:00
elaexuotee@wilsonb.com
8e2aad26ae
gnu: Add lemonbar-xft. 
* gnu/packages/wm.scm (lemonbar-xft): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2020-12-09 09:10:33 +00:00
Ryan Prior
9941036559
gnu: Add go-github-com-aws-sdk. 
* gnu/packages/golang.scm (go-github-com-aws-sdk): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-12-09 09:45:35 +02:00
Ryan Prior
016501aec6
gnu: Add go-github-com-jmespath-go-jmespath. 
* gnu/packages/golang.scm (go-github-com-jmespath-go-jmespath): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-12-09 09:45:35 +02:00
Ryan Prior
f7c2896e52
gnu: Add go-github-com-go-sql-driver-mysql. 
* gnu/packages/golang.scm (go-github-com-go-sql-driver-mysql): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-12-09 09:45:31 +02:00
Leo Famulari
2b0185a74b
gnu: linux-libre 4.14: Update to 4.14.211. 
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.211.
(linux-libre-4.14-pristine-source): Update hash.
 2020-12-09 01:08:15 -05:00
Leo Famulari
a2eae5ec4a
gnu: linux-libre 4.19: Update to 4.19.162. 
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.162.
(linux-libre-4.19-pristine-source): Update hash.
 2020-12-09 01:08:15 -05:00
Leo Famulari
66b1b55148
gnu: linux-libre 5.4: Update to 5.4.82. 
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.82.
(linux-libre-5.4-pristine-source): Update hash.
 2020-12-09 01:08:14 -05:00
Leo Famulari
54f777ca4e
gnu: linux-libre: Update to 5.9.13. 
* gnu/packages/linux.scm (linux-libre-5.9-version): Update to 5.9.13.
(linux-libre-5.9-pristine-source): Update hash.
 2020-12-09 01:08:09 -05:00
Leo Famulari
02b21f35cc
gnu: OpenSSL: Update to 1.1.1i [fixes CVE-2020-1971]. 
* gnu/packages/tls.scm (openssl)[replacement]: Update replacement to 1.1.1i
(openssl-1.1.1g): Replace with ...
(openssl-1.1.1i): ... new variable.
 2020-12-08 19:48:09 -05:00
Ludovic Courtès
456421fc0f
gnu: guix: Update to 799f066. 
* gnu/packages/package-management.scm (guix): Update to 799f066.
 2020-12-08 23:38:04 +01:00
Ludovic Courtès
4a98735297
gnu: autotools: Add version 2.70. 
* gnu/packages/autotools.scm (autoconf): Rename to...
(autoconf-2.69): ... this.
(autoconf): Define as an alias for AUTOCONF-2.69.
(autoconf-2.70): New variable.
 2020-12-08 22:28:00 +01:00
Vincent Legoll
20e5658c04
gnu: ocaml-menhir: Update to 20200211. 
* gnu/packages/ocaml.scm (ocaml-menhir): Update to 20200211.
[build-system]: Switch from gnu to dune.
[arguments]: Remove phases and make-flags.
[native-inputs]: Remove field.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2020-12-08 20:18:11 +00:00
Efraim Flashner
2d1a621b8d
gnu: mruby: Update to 2.1.2. 
* gnu/packages/ruby.scm (mruby): Update to 2.1.2.
 2020-12-08 22:09:30 +02:00
L p R n d n
8a55a3994c
gnu: Add mypaint. 
* gnu/packages/image.scm (mypaint): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2020-12-08 20:06:38 +00:00
Christopher Baines
c9c3569ad9
gnu: libmypaint: Update to 1.6.1. 
Needed by mypaint@2.0.1.

* gnu/packages/gimp.scm (libmypaint): Update to 1.6.1.
 2020-12-08 20:06:34 +00:00
Leo Famulari
e1d3b07ffc
gnu: isync: Use OpenSSL 1.1. 
* gnu/packages/mail.scm (isync)[inputs]: Replace openssl-1.0 with openssl.
 2020-12-08 13:25:27 -05:00
Efraim Flashner
adbb62f16e
gnu: fcitx5-material-color-theme: Add source file-name. 
* gnu/packages/fcitx5.scm (fcitx5-material-color-theme)[source]: Add
file-name field.
 2020-12-08 18:14:31 +02:00
Zhu Zihao
af34f757ce
gnu: Add fcitx5-material-color-theme. 
* gnu/packages/fcitx5.scm (fcitx5-material-color-theme): New variable.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2020-12-08 20:31:47 +08:00
Zhu Zihao
ac1c7530d8
gnu: Add fcitx5-configtool. 
* gnu/packages/fcitx5.scm (fcitx5-configtool): New variable.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2020-12-08 20:31:47 +08:00
Zhu Zihao
9a23698ecd
gnu: Add fcitx5-chinese-addons. 
* gnu/packages/fcitx5.scm (fcitx5-chinese-addons): New variable.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2020-12-08 20:31:47 +08:00
Zhu Zihao
d4aca38b50
gnu: Add fcitx5-gtk. 
* gnu/packages/fcitx5.scm (fcitx5-gtk): New variable.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2020-12-08 20:31:47 +08:00
Zhu Zihao
4394d3721a
gnu: Add fcitx5-qt. 
* gnu/packages/fcitx5.scm (fcitx5-qt): New variable.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2020-12-08 20:31:47 +08:00
Zhu Zihao
69d3419ca3
gnu: Add libime. 
* gnu/packages/fcitx5.scm (libime): New variable.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2020-12-08 20:31:47 +08:00
Zhu Zihao
2d07803be8
gnu: Add fcitx5-lua. 
* gnu/packages/fcitx5.scm (fcitx5-lua): New variable.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2020-12-08 20:31:47 +08:00
Zhu Zihao
aa5cfb39a5
gnu: Add fcitx5. 
* gnu/packages/fcitx5.scm (fcitx5): New variable.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2020-12-08 20:31:47 +08:00
Zhu Zihao
ad6cf3d4ad
gnu: Add xcb-imdkit. 
* gnu/packages/fcitx5.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2020-12-08 20:31:47 +08:00
Mathieu Othacehe
2dd4f389c7
gnu: cuirass: Update to 0.0.1-56.697fa14. 
* gnu/packages/ci.scm (cuirass): Update to 0.0.1-56.697fa14.
 2020-12-08 11:48:53 +01:00
Ryan Prior
ab58b2cc32
gnu: Add cjson. 
* gnu/packages/javascript.scm (cjson): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2020-12-08 09:26:46 +00:00
Ryan Prior
b5c51ae086
gnu: Add tiny-bignum. 
* gnu/packages/maths.scm (tiny-bignum): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2020-12-08 09:21:50 +00:00
Martin Becze
2d8deaa06e
gnu: trezord: Update to 2.0.30. 
* gnu/packages/finance.scm (trezord): Update to 2.0.30.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2020-12-08 08:50:43 +00:00
Martin Becze
2d9acf675a
gnu: Add go-gopkg-in-natefinch-lumberjack.v2. 
* gnu/packages/golang.scm (go-gopkg-in-natefinch-lumberjack.v2): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2020-12-08 08:50:43 +00:00
Martin Becze
2d0716e081
gnu: Add go-github-com-gorilla-csrf. 
* gnu/packages/golang.scm (go-github-com-gorilla-csrf): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2020-12-08 08:37:49 +00:00
Martin Becze
4368b9b2d7
gnu: Add go-github-com-gorilla-securecookie. 
* gnu/packages/golang.scm (go-github-com-gorilla-securecookie): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2020-12-08 08:37:49 +00:00
Martin Becze
d2a42cee0b
gnu: Add go-github-com-gorilla-handlers. 
* gnu/packages/golang.scm (go-github-com-gorilla-handlers): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2020-12-08 08:37:49 +00:00
Martin Becze
33504d4d70
gnu: Add go-github-com-felixge-httpsnoop. 
* gnu/packages/golang.scm (go-github-com-felixge-httpsnoop): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2020-12-08 08:37:44 +00:00
Martin Becze
836428c793
gnu: go-github-com-gorilla-mux: Update to 1.8.0. 
* gnu/packages/golang.scm (go-github-com-gorilla-mux): Update to 1.8.0.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2020-12-08 08:31:29 +00:00
Tobias Geerinckx-Rice
53cd301b08
gnu: scummvm: Update source URL. 
* gnu/packages/emulators.scm (scummvm)[source]: Use HTTPS & new
subdomain.

Reported by Matthew Brooks <matthewfbrooks@mailbox.org>.
 2020-12-08 08:46:54 +01:00
Michael Rohleder
dcf8dd2be5
gnu: gita: Install shell completions. 
* gnu/packages/version-control.scm (gita)[arguments]: Add phase
install-shell-completions.

Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
 2020-12-08 08:09:21 +03:00
Ryan Desfosses
b5e52d8225
gnu: Add emacs-burly. 
* gnu/packages/emacs-xyz.scm (emacs-burly): New variable.

Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
 2020-12-08 07:59:24 +03:00
Ryan Desfosses
fedf7d5721
gnu: Add emacs-map. 
* gnu/packages/emacs-xyz.scm (emacs-map): New variable.

Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
 2020-12-08 07:59:22 +03:00
Leo Prikler
403dda2e66
gnu: shadowsocks: Build against openssl. 
This patch allows shadowsocks to be used without supplying libopenssl in its
configuration.  See also https://unix.stackexchange.com/questions/623324/.

* gnu/packages/networking.scm (shadowsocks)[inputs]: Add openssl.
[#:phases]: Add patch-crypto-paths.

Signed-off-by: Marius Bakke <marius@gnu.org>
 2020-12-08 00:45:56 +01:00
Marius Bakke
adf0edadef
gnu: qoauth: Minor cosmetic improvements. 
* gnu/packages/web.scm (qoauth)[arguments]: Add #:tests?.  Don't delete
'check' phase.  Override 'configure' instead of adding new phase.
 2020-12-08 00:45:56 +01:00
Marius Bakke
627b70e3ac
gnu: qoauth: Fix build failure. 
Fixes <https://bugs.gnu.org/45031>.
Reported by Distopico <distopico@riseup.net>.

* gnu/packages/web.scm (qoauth)[arguments]: Add phase
'adjust-mkspecs-directory'.
 2020-12-08 00:45:56 +01:00
Marius Bakke
63be1a7dae
gnu: qca: Correct license. 
* gnu/packages/kde.scm (qca)[license]: Change from LGPL2.1 to LGPL2.1+.
 2020-12-08 00:45:56 +01:00
Oleg Pykhalov
608113c083
gnu: Add gita. 
* gnu/packages/version-control.scm (gita): New variable.
 2020-12-08 01:49:38 +03:00
Tobias Geerinckx-Rice
ac3af8f7ed
gnu: imapfilter: Update to 2.7.5. 
* gnu/packages/mail.scm (imapfilter): Update to 2.7.5.
 2020-12-07 23:44:36 +01:00