* gnu/packages/pdf.scm (qpdfview)[source]: Add patch to include a missing
header.
* gnu/packages/patches/qpdfview-qt515-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
Signed-off-by: Leo Famulari <leo@famulari.name>
* gnu/packages/music.scm (python-mediafile): New variable.
* gnu/packages/patches/python-mediafile-wavpack.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/video.scm (obs): Use it.
* gnu/packages/patches/obs-modules-location.patch: Patch it.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu/packages/bioinformatics.scm (vcflib)[arguments]: In custom
generated pkg-config file, link with all needed libraries and
fix linker library.
* gnu/packages/patches/freebayes-devendor-deps.patch: Adjust accordingly.
* gnu/packages/cpp.scm (c++-gsl): New variable.
* gnu/packages/patches/c++-gsl-find-system-gtest.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
* gnu/packages/patches/gst-plugins-good-fix-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gstreamer.scm (gst-plugins-good)[source]: Use it.
This package fails to build and has been superseded by avogadro2.
* gnu/packages/chemistry.scm (avogadro): Remove variable.
* gnu/packages/patches/avogadro-boost148.patch,
gnu/packages/patches/avogadro-eigen3-update.patch,
gnu/packages/patches/avogadro-python-eigen-lib.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
Includes fixes for CVE-2021-23953, CVE-2021-23954, CVE-2020-26976,
CVE-2021-23960, and CVE-2021-23964.
* gnu/packages/gnuzilla.scm (%icecat-version, %icecat-build-id): Update.
(icecat-source): Update gnuzilla commit, base version, and hashes.
* gnu/packages/patches/icecat-makeicecat.patch: Adapt to new version.
* gnu/packages/patches/idris-disable-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/idris.scm (idris): Update to 1.3.3.
[source]: Use the patch.
[native-inputs]: Add ghc-cheapskate.
[arguments]: Adjust cheapskate version bounds. Make auxiliary test script
executable.
The stack overflow test limits the virtual memory size using setrlimit with
RLIMIT_AS argument. This is ignored when using QEMU transparent emulation,
causing the test to crash.
* gnu/packages/patches/guile-2.2-skip-so-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/guile.scm (guile-3.0-latest): Add it.
* gnu/packages/gnuzilla.scm (%icecat-version, %icecat-build-id): Update.
(icecat-source): Update gnuzilla commit, base version, and hashes.
* gnu/packages/patches/icecat-makeicecat.patch: Adapt to new version.
* gnu/local.mk (dist_patch_DATA): Add Smalltalk patch.
* gnu/packages/patches/smalltalk-multiplication-overflow.patch: Patch
from upstream commit 72ada189aba0283c551ead16635c1983968080b8.
* gnu/packages/smalltalk.scm (smalltalk): Use patch and link with gmp
and lightning libraries instead of the included source.
* gnu/packages/patches/shakespeare-spl-fix-grammar.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it here.
* gnu/packages/esolangs.scm (shakespeare-spl): New variable.
* gnu/packages/embedded.scm (sdcc): Update to 4.0.0.
[native-inputs]: Add zlib.
[description]: Update to match new version.
* gnu/packages/patches/sdcc-disable-non-free-code.patch: Update to match new
version.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
Fixes <https://bugs.gnu.org/45252>.
* gnu/packages/patches/libffi-float128-powerpc64le.patch: Import patch file
from <https://github.com/libffi/libffi/pull/561.patch>.
* gnu/packages/libffi.scm (libffi)[arguments]: Apply patch conditionally for
powerpc64le-* systems in a phase.
[inputs]: Add patch as input conditionally for powerpc64le-* systems.
* gnu/local.mk (dist_patch_DATA): Add patch file to build system.
Signed-off-by: Chris Marusich <cmmarusich@gmail.com>
Includes fixes for CVE-2020-16042, CVE-2020-26971, CVE-2020-26973,
CVE-2020-26974, CVE-2020-26978, CVE-2020-35111, CVE-2020-35112, and
CVE-2020-35113.
* gnu/packages/gnuzilla.scm (%icecat-version, %icecat-build-id): Update.
(icecat-source): Update gnuzilla commit, base version, and hashes.
* gnu/packages/patches/icecat-makeicecat.patch: Adapt to new version.
* gnu/packages/crates-io.scm (rust-ndarray-0.12): New variable.
* gnu/packages/patches/rust-ndarray-remove-blas-src-dep.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/patches/purescript-relax-dependencies.patch: Update patch for
new version of Purescript.
Signed-off-by: Leo Famulari <leo@famulari.name>
* gnu/packages/patches/pciutils-hurd-fix.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/pciutils.scm (pciutils)[arguments]: Add
'apply-hurd-patch' phase when (hurd-target?) is true.
[inputs]: Add "hurd-patch" entry when (hurd-target?) is true.
This fixes a build failure from 79b31767d0.
* gnu/packages/patches/ghostscript-freetype-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/ghostscript.scm (ghostscript)[source](patches): Add it.
* gnu/packages/dns.scm (knot-resolver): Update to 5.2.0.
[source]: Add patch from upstream commit to fix the internal map() function on
32-bit platforms.
[native-inputs]: Add texinfo to enable generating the manual in Info format.
[inputs]: Add nghttp2:lib to enable the new DNS-over-HTTPS implementation.
* gnu/packages/patches/knot-resolver-fix-map-command-on-32-bit.patch: New
file.
* gnu/local.mk (dist_patch_DATA): Add it.
Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
* gnu/packages/maths.scm (superlu-dist): Update to 6.4.0
[source]: Use git-fetch, as tarballs are no longer published.
* gnu/packages/patches/superlu-dist-awpm-grid.patch: Remove all but the first
hunk; they are unnecessary.
Fixes use in latest versions of SuperLU_DIST. See
e.g. https://github.com/xiaoyeli/superlu_dist/issues/60
* gnu/packages/patches/combinatorial-blas-awpm.patch: Remove globals related
to performance measurement. Declare non-template function inline.
* gnu/packages/patches/cl-asdf-config-directories.patch: New file.
* gnu/local.mk (dist_PATCH_DATA): Add it.
* gnu/packages/lisp.scm (cl-asdf)[native-inputs]: Add it.
[arguments]: Apply the new patch.
Co-authored-by: Pierre Neidhardt <mail@ambrevar.xyz>
* gnu/packages/lisp-xyz.scm (cl-clml, sbcl-clml): New variables.
* gnu/packages/patches/sbcl-clml-fix-types.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/python-xyz.scm (python-cairocffi): Update to 1.2.0.
[source]: Fetch from Git.
[patches]: Remove field.
[inputs]: Remove pango.
[native-inputs]: Remove pkg-config and python-docutils. Add python-numpy and
python-sphinx-rtd-theme.
[phases]{patch-paths}: Adjust. Fix the patching of gdk-3.
{disable-linters}: New phase.
{install-doc}: Adjust. The license file is now installed by a build phase.
* gnu/packages/patches/python-cairocffi-dlopen-path.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): De-register it.
* gnu/packages/animation.scm (gnash): New variable.
* gnu/packages/patches/gnash-fix-giflib-version: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
Signed-off-by: Christopher Baines <mail@cbaines.net>
* gnu/packages/bittorrent.scm (transmission)[source]: Add patch to make
Transmission honor the "localedir" option to its configure script.
[arguments]<configure-flags>: Use "localedir" to set the "gui" output as the
location for (GTK-specific) localization data.
<phases>: Update "move-gui" to remove a now-superfluous call to "mkdir" and omit
"share/locale" from the list of directories needing to be moved between outputs.
* gnu/packages/patches/transmission-honor-localedir.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
Signed-off-by: Leo Famulari <leo@famulari.name>
* gnu/packages/patches/python-aiohttp-3.6.2-no-warning-fail.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/python-web.scm (python-aiohttp)[source](patches): Remove.
[arguments]: Use UTIME instead of calling out to 'touch'. Don't delete
now-working tests; but disable some new ones. Replace the 'check' phase.
[propagated-inputs]: Add PYTHON-TYPING-EXTENSIONS.
[native-inputs]: Remove PYTHON-PYTEST-RUNNER, PYTHON-PYTEST-XDIST,
PYTHON-PYTEST-TIMEOUT, and PYTHON-PYTEST-FORKED. Add PYTHON-PYTEST and
PYTHON-RE-ASSERT.
* gnu/packages/patches/openssh-fix-ssh-copy-id.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/ssh.scm (openssh)[source]: Use it.
Signed-off-by: Leo Famulari <leo@famulari.name>
* gnu/packages/pdf.scm (mupdf)[source]: Add patch.
[arguments]: Build and find the shared library.
(zathura-pdf-mupdf)[arguments]: Add a 'remove-libmupdfthird.a-requirement
phase to deal with the now-missing static one.
* gnu/packages/patches/mupdf-fix-linkage.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
