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Author SHA1 Message Date
Eric Bavier
9ce587f231
gnu: libhilbert: Remove package. 
This package's source and webpage has disappeared for some time, and upstream
projects (e.g. libmesh) seem to be bundling it, so we remove it for now.

* gnu/packages/maths.scm (libhilbert): Remove variable.
 2017-10-24 20:16:49 -05:00
Eric Bavier
958b5a1caa
gnu: slepc: Update to 3.8.0. 
* gnu/packages/maths.scm (slepc): Update to 3.8.0.
 2017-10-24 20:16:49 -05:00
Eric Bavier
6fec298d3e
gnu: petsc: Update to 3.8.0. 
* gnu/packages/maths.scm (petsc): Update to 3.8.0
[native-inputs]: Remove perl, which is no longer needed.
 2017-10-24 20:16:42 -05:00
Ben Woodcroft
6f141eff47
gnu: bwa: Update to 0.7.17. 
* gnu/packages/bioinformatics.scm (bwa): Update to 0.7.17.
 2017-10-25 09:29:22 +10:00
Ben Woodcroft
ae6e00f6f9
gnu: bwa: Change source URL to GitHub. 
* gnu/packages/bioinformatics.scm (bwa)[source]: Change source URL to
GitHub.
 2017-10-25 09:29:22 +10:00
Petter
85c991b029
gnu: Add perl-moox-options. 
* gnu/packages/perl.scm (perl-moox-options): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 23:30:25 +02:00
Ricardo Wurmus
68998abd4f
gnu: perl-getopt-long-descriptive: Update to 0.100. 
* gnu/packages/perl.scm (perl-getopt-long-descriptive): Update to 0.100.
[native-inputs]: Add perl-cpan-meta-check.
 2017-10-24 23:30:24 +02:00
Petter
b936ddf312
gnu: Add perl-moox-configfromfile. 
* gnu/packages/perl.scm (perl-moox-configfromfile): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 23:30:24 +02:00
Petter
8df39f572c
gnu: Add perl-moox-file-configdir. 
* gnu/packages/perl.scm (perl-moox-file-configdir): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 23:30:24 +02:00
Petter
658a4976fa
gnu: Add perl-moox-cmd. 
* gnu/packages/perl.scm (perl-moox-cmd): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 23:30:24 +02:00
Ricardo Wurmus
b547ef1d09
gnu: perl-list-moreutils: Update to 0.426. 
* gnu/packages/perl.scm (perl-list-moreutils): Update to 0.426.
[arguments]: Work around dotless @INC problem.
[native-inputs]: Add perl-test-leaktrace; remove perl-inc-latest and
perl-test-writevariants.
[propagated-inputs]: Add perl-list-moreutils-xs.
 2017-10-24 23:30:24 +02:00
Ricardo Wurmus
189bfb1112
gnu: Add perl-list-moreutils-xs. 
* gnu/packages/perl.scm (perl-list-moreutils-xs): New variable.
 2017-10-24 23:30:24 +02:00
Petter
544dc8d46b
gnu: Add perl-libintl-perl. 
* gnu/packages/perl.scm (perl-libintl-perl): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 23:30:23 +02:00
Petter
180411e3f4
gnu: Add perl-file-configdir. 
* gnu/packages/perl.scm (perl-file-configdir): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 23:30:23 +02:00
Petter
987232e67d
gnu: Add perl-data-record. 
* gnu/packages/perl.scm (perl-data-record): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 23:30:23 +02:00
Petter
8dca3bde0e
gnu: Add perl-data-printer. 
* gnu/packages/perl.scm (perl-data-printer): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 23:30:23 +02:00
Petter
857d75388b
gnu: Add perl-clone-pp. 
* gnu/packages/perl.scm (perl-clone-pp): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 23:30:23 +02:00
Petter
0de1e5e557
gnu: Add perl-data. 
* gnu/packages/perl.scm (perl-data): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 23:30:23 +02:00
ng0
6bf249211d
gnu: gnurl: Update to 7.56.1. 
* gnu/packages/gnunet.scm (gnurl): Update to 7.56.1.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-10-24 17:19:15 -04:00
Efraim Flashner
648c896ad3
gnu: screen: Update to 4.6.2. 
* gnu/packages/screen.scm (screen): Update to 4.6.2.
 2017-10-24 21:26:19 +03:00
Leo Famulari
ae7e24c421
gnu: mupdf: Fix CVE-2017-{14685,14686,14687}. 
* gnu/packages/patches/mupdf-CVE-2017-14685.patch,
gnu/packages/patches/mupdf-CVE-2017-14686.patch,
gnu/packages/patches/mupdf-CVE-2017-14687.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/pdf.scm (mupdf)[source]: Use them.
 2017-10-24 13:44:34 -04:00
Leo Famulari
6dcc8239be
gnu: icu4c: Fix CVE-2017-14952. 
* gnu/packages/patches/icu4c-CVE-2017-14952.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/icu4c.scm (icu4c)[replacement]: New field.
(icu4c-fixed): New variable.
 2017-10-24 13:10:35 -04:00
Leo Famulari
c330c27f7f
gnu: syncthing: Split into two outputs. 
* gnu/packages/syncthing.scm (syncthing)[outputs]: New field.
[arguments]: Change the 'install' and 'install-docs' phases to install to the
two outputs.
 2017-10-24 13:10:35 -04:00
Leo Famulari
1899ef0b83
gnu: syncthing: Use install-source? to disable installing the source code. 
* gnu/packages/syncthing.scm (syncthing): Set #:install-source? #f
instead of deleting the install-source phase.
 2017-10-24 13:10:35 -04:00
Leo Famulari
c10851cf91
build-system/go: Parameterize installing the source code. 
* guix/build-system/go.scm (go-build): Add install-source? key.
* guix/build/go-build-system.scm (install-source): Check if
install-source? is true.
 2017-10-24 13:10:34 -04:00
Leo Famulari
1c37f839fb
build-system/go: Strip the Go binaries with the native tool. 
* guix/build/go-build-system.scm (build): Tell the Go linker to strip some
symbol tables and debugging information.
 2017-10-24 13:10:34 -04:00
Petter
22473f6964
gnu: Add perl-types-path-tiny. 
* gnu/packages/perl.scm (perl-types-path-tiny): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 18:38:32 +02:00
Petter
35aaf4b1bd
gnu: Add perl-type-tiny-xs. 
* gnu/packages/perl.scm (perl-type-tiny-xs): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 18:38:32 +02:00
Petter
237edb6d1f
gnu: Add perl-test-taint. 
* gnu/packages/perl.scm (perl-test-taint): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 18:38:32 +02:00
Petter
cb2f48e7f2
gnu: Add perl-term-size-any. 
* gnu/packages/perl.scm (perl-term-size-any): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 18:38:32 +02:00
Petter
fcbc997e03
gnu: Add perl-term-size-perl. 
* gnu/packages/perl.scm (perl-term-size-perl): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 18:38:32 +02:00
Petter
a1798ee3c7
gnu: Add perl-devel-hide. 
* gnu/packages/perl.scm (perl-devel-hide): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 18:38:31 +02:00
Petter
8ae0558aad
gnu: Add perl-sort-naturally. 
* gnu/packages/perl.scm (perl-sort-naturally): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 18:38:31 +02:00
Petter
b6cd89084d
gnu: Add perl-proc-invokeeditor. 
* gnu/packages/perl.scm (perl-proc-invokeeditor): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 18:38:31 +02:00
Petter
b44ecca691
gnu: Add perl-archive-extract. 
* gnu/packages/compression.scm (perl-archive-extract): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 18:38:31 +02:00
Ricardo Wurmus
5aeb661134
gnu: Add perl-gnupg-interface. 
* gnu/packages/gnupg.scm (perl-gnupg-interface): New variable.

Co-authored-by: Petter <petter@mykolab.ch>
 2017-10-24 18:38:31 +02:00
Leo Famulari
6ee4fd2ae1
gnu: borg: Split up the monolithic man page. 
* gnu/packages/backup.scm (borg)[arguments]: Rewrite 'install-docs'
phase to install one man page per Borg sub-command.
 2017-10-24 10:21:51 -04:00
Leo Famulari
db4411b42b
gnu: python-docutils: Update to 0.14. 
* gnu/packages/python.scm (python-docutils, python2-docutils): Update to 0.14.
 2017-10-24 10:21:51 -04:00
Petter
85f225fbf7
gnu: Add perl-xml-twig. 
* gnu/packages/xml.scm (perl-xml-twig): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 10:40:49 +02:00
Marius Bakke
91f2daa58d
gnu: curl: Update replacement to 7.56.1 [fixes CVE-2017-1000257]. 
* gnu/packages/curl.scm (curl-7.56.0): Rename to ...
(curl-7.56.1): ... this.  Update to 7.56.1.
(curl)[replacement]: Adjust accordingly.
 2017-10-24 08:09:47 +02:00
Danny Milosavljevic
fc9a93cbf9
gnu: claws-mail: Re-enable vcalendar. 
* gnu/packages/mail.scm (claws-mail): Use module (gnu packages calendar).
[inputs]: Add libical.
 2017-10-24 08:07:24 +02:00
Marius Bakke
62d48234e2
gnu: git: Update to 2.14.3. 
* gnu/packages/version-control.scm (git): Update to 2.14.3.
 2017-10-24 07:55:34 +02:00
Ricardo Wurmus
306556528e
gnu: Add sorcer. 
* gnu/packages/music.scm (sorcer): New variable.
 2017-10-24 07:54:43 +02:00
Ricardo Wurmus
2809a355b6
gnu: Add papagayo. 
* gnu/packages/animation.scm (papagayo): New variable.
 2017-10-24 07:54:43 +02:00
Ludovic Courtès
2900665888
pull: Hide compilation warnings. 
* guix/build/pull.scm (build-guix): Bind 'current-warning-port' to a
void port.
 2017-10-23 17:08:51 -07:00
Ludovic Courtès
ce33c3af76
pull: Add (guix build compile) to the mix. 
Fixes <https://bugs.gnu.org/28956>.
Reported by Leo Famulari <leo@famulari.name>.

* build-aux/build-self.scm (build): Add (guix build compile) to
 #:modules.
* guix/build/pull.scm (build-guix): Wrap 'compile-files' call in
'with-directory-excursion'.  Strip "./" from FILES when passing it to
'compile-files'.
 2017-10-23 17:08:50 -07:00
Petter
7a04dddd26
gnu: Add perl-html-tidy. 
* gnu/packages/web.scm (perl-html-tidy): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 00:06:21 +02:00
Petter
0a9bdd9583
gnu: Add tidyp. 
* gnu/packages/web.scm (tidyp): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 00:06:20 +02:00
Petter
efc8f7d03d
gnu: Add perl-lwp-online. 
* gnu/packages/web.scm (perl-lwp-online): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 00:05:28 +02:00
Petter
9e88b210f6
gnu: Add perl-xml-handler-yawriter. 
* gnu/packages/xml.scm (perl-xml-handler-yawriter): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 00:04:15 +02:00