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30830 Commits

Author SHA1 Message Date
Tobias Geerinckx-Rice
58cd3123ac
gnu: pulseview: Update to 0.4.1. 
* gnu/packages/electronics.scm (pulseview): Update to 0.4.1.
[arguments]: Remove CMAKE_CXX_FLAGS from #:configure-flags. (Keep)
build(ing) the unit tests. Add a ‘remove-empty-doc-directory’ phase.
 2018-10-30 23:40:42 +01:00
Tobias Geerinckx-Rice
61c58b7827
gnu: sigrok-cli: Update to 0.7.1. 
* gnu/packages/electronics.scm (sigrok-cli): Update to 0.7.1.
 2018-10-30 23:40:42 +01:00
Tobias Geerinckx-Rice
295fc4152a
gnu: cloc: Update to 1.80. 
* gnu/packages/code.scm (cloc): Update to 1.80.
 2018-10-30 23:40:42 +01:00
Tobias Geerinckx-Rice
1204402a90
gnu: python-partd: Update to 0.3.9. 
* gnu/packages/python.scm (python-partd): Update to 0.3.9.
 2018-10-30 23:40:42 +01:00
Ricardo Wurmus
fd649d1e68
gnu: Add r-r2glmm. 
* gnu/packages/cran.scm (r-r2glmm): New variable.
 2018-10-30 22:47:35 +01:00
Ricardo Wurmus
7c02dd6268
gnu: Add r-lmertest. 
* gnu/packages/cran.scm (r-lmertest): New variable.
 2018-10-30 22:47:26 +01:00
Ricardo Wurmus
49863fd695
gnu: Add r-afex. 
* gnu/packages/cran.scm (r-afex): New variable.
 2018-10-30 22:47:18 +01:00
Ricardo Wurmus
20ff6e3a34
gnu: Add r-mvabund. 
* gnu/packages/cran.scm (r-mvabund): New variable.
 2018-10-30 22:47:10 +01:00
Ricardo Wurmus
4fb35ebd8d
gnu: Add r-rcppgsl. 
* gnu/packages/cran.scm (r-rcppgsl): New variable.
 2018-10-30 22:47:00 +01:00
Ricardo Wurmus
373cef0a0c
gnu: Add r-tweedie. 
* gnu/packages/cran.scm (r-tweedie): New variable.
 2018-10-30 22:46:47 +01:00
Ricardo Wurmus
32499b26e6
gnu: Add r-clusteval. 
* gnu/packages/cran.scm (r-clusteval): New variable.
 2018-10-30 22:13:01 +01:00
Ricardo Wurmus
7a06cdfa8c
gnu: r-analytics: Update to 3.0. 
* gnu/packages/cran.scm (r-analytics): Update to 3.0.
[propagated-inputs]: Add r-vim.
 2018-10-30 21:48:10 +01:00
Ricardo Wurmus
e5f9e9fa79
gnu: r-radiant-data: Update to 0.9.7. 
* gnu/packages/cran.scm (r-radiant-data): Update to 0.9.7.
[propagated-inputs]: Add r-shinyfiles and r-summarytools.
 2018-10-30 21:48:10 +01:00
Ricardo Wurmus
39528a5ee9
gnu: r-pracma: Update to 2.1.8. 
* gnu/packages/maths.scm (r-pracma): Update to 2.1.8.
[propagated-inputs]: Remove r-quadprog.
 2018-10-30 21:48:10 +01:00
Ricardo Wurmus
4633c8e6fc
gnu: r-shinydashboard: Update to 0.7.1. 
* gnu/packages/web.scm (r-shinydashboard): Update to 0.7.1.
[propagated-inputs]: Add r-promises.
 2018-10-30 21:48:10 +01:00
Ricardo Wurmus
65279cc8f3
gnu: Add r-shinyfiles. 
* gnu/packages/web.scm (r-shinyfiles): New variable.
 2018-10-30 21:48:10 +01:00
Ricardo Wurmus
a056e2251e
gnu: r-htmlwidgets: Update to 1.3. 
* gnu/packages/web.scm (r-htmlwidgets): Update to 1.3.
 2018-10-30 21:48:10 +01:00
Ricardo Wurmus
f697ef4a0d
gnu: r-servr: Update to 0.11. 
* gnu/packages/web.scm (r-servr): Update to 0.11.
 2018-10-30 21:48:10 +01:00
Ricardo Wurmus
8871a51350
gnu: r-webshot: Update to 0.5.1. 
* gnu/packages/cran.scm (r-webshot): Update to 0.5.1.
[propagated-inputs]: Add r-callr; remove r-processx and r-withr.
 2018-10-30 21:48:09 +01:00
Ricardo Wurmus
d42f741035
gnu: r-dendextend: Update to 1.9.0. 
* gnu/packages/cran.scm (r-dendextend): Update to 1.9.0.
 2018-10-30 21:48:09 +01:00
Ricardo Wurmus
31c8d9fe00
gnu: r-emmeans: Update to 1.3.0. 
* gnu/packages/cran.scm (r-emmeans): Update to 1.3.0.
 2018-10-30 21:48:09 +01:00
Ricardo Wurmus
bec74196ea
gnu: r-abps: Update to 0.3. 
* gnu/packages/cran.scm (r-abps): Update to 0.3.
 2018-10-30 21:48:09 +01:00
Ricardo Wurmus
464676a970
gnu: r-proc: Update to 1.13.0. 
* gnu/packages/cran.scm (r-proc): Update to 1.13.0.
 2018-10-30 21:48:03 +01:00
Ricardo Wurmus
71d995392b
gnu: r-rdpack: Update to 0.10-1. 
* gnu/packages/cran.scm (r-rdpack): Update to 0.10-1.
 2018-10-30 21:47:54 +01:00
Ricardo Wurmus
081af9fae7
gnu: r-hdf5r: Update to 1.0.1. 
* gnu/packages/cran.scm (r-hdf5r): Update to 1.0.1.
 2018-10-30 21:47:46 +01:00
Ricardo Wurmus
08645fcff5
gnu: r-fansi: Update to 0.4.0. 
* gnu/packages/cran.scm (r-fansi): Update to 0.4.0.
 2018-10-30 21:47:37 +01:00
Ricardo Wurmus
7608984fe9
gnu: r-later: Update to 0.7.5. 
* gnu/packages/cran.scm (r-later): Update to 0.7.5.
 2018-10-30 21:47:28 +01:00
Ricardo Wurmus
80234d3294
gnu: r-maptools: Update to 0.9-4. 
* gnu/packages/cran.scm (r-maptools): Update to 0.9-4.
 2018-10-30 21:47:20 +01:00
Ricardo Wurmus
fda8dd58c2
gnu: r-shinyace: Update to 0.3.2. 
* gnu/packages/cran.scm (r-shinyace): Update to 0.3.2.
 2018-10-30 21:47:06 +01:00
Ricardo Wurmus
02c57c018a
gnu: r-np: Update to 0.60-9. 
* gnu/packages/cran.scm (r-np): Update to 0.60-9.
 2018-10-30 21:46:57 +01:00
Ricardo Wurmus
44de41b572
gnu: r-expm: Update to 0.999-3. 
* gnu/packages/cran.scm (r-expm): Update to 0.999-3.
 2018-10-30 21:46:48 +01:00
Ricardo Wurmus
484e81f73a
gnu: r-cubature: Update to 1.4-1. 
* gnu/packages/cran.scm (r-cubature): Update to 1.4-1.
 2018-10-30 21:46:36 +01:00
Ricardo Wurmus
905734fd7c
gnu: r-extradistr: Update to 1.8.10. 
* gnu/packages/cran.scm (r-extradistr): Update to 1.8.10.
 2018-10-30 21:46:26 +01:00
Ricardo Wurmus
534bf85b9d
gnu: r-ttr: Update to 0.23-4. 
* gnu/packages/cran.scm (r-ttr): Update to 0.23-4.
 2018-10-30 21:46:17 +01:00
Ricardo Wurmus
dda4ce560f
gnu: r-tinytex: Update to 0.9. 
* gnu/packages/cran.scm (r-tinytex): Update to 0.9.
 2018-10-30 21:46:10 +01:00
Ricardo Wurmus
a8de3090d8
gnu: r-xfun: Update to 0.4. 
* gnu/packages/cran.scm (r-xfun): Update to 0.4.
 2018-10-30 21:46:00 +01:00
Ricardo Wurmus
8c456dff26
gnu: r-fitdistrplus: Update to 1.0-11. 
* gnu/packages/cran.scm (r-fitdistrplus): Update to 1.0-11.
[propagated-inputs]: Add r-npsurv.
 2018-10-30 21:45:51 +01:00
Ricardo Wurmus
bba80fadbe
gnu: r-magic: Update to 1.5-9. 
* gnu/packages/cran.scm (r-magic): Update to 1.5-9.
 2018-10-30 21:45:42 +01:00
Ricardo Wurmus
5621b8403b
gnu: r-sm: Update to 2.2-5.6. 
* gnu/packages/cran.scm (r-sm): Update to 2.2-5.6.
 2018-10-30 21:45:32 +01:00
Ricardo Wurmus
870faab4b7
gnu: r-xts: Update to 0.11-1. 
* gnu/packages/cran.scm (r-xts): Update to 0.11-1.
 2018-10-30 21:45:16 +01:00
Ricardo Wurmus
16a39c2d56
gnu: r-ggridges: Update to 0.5.1. 
* gnu/packages/cran.scm (r-ggridges): Update to 0.5.1.
 2018-10-30 21:45:07 +01:00
Ricardo Wurmus
9e82d6080e
gnu: r-cli: Update to 1.0.1. 
* gnu/packages/cran.scm (r-cli): Update to 1.0.1.
 2018-10-30 21:44:59 +01:00
Ricardo Wurmus
2b8126a4ec
gnu: r-reshape: Update to 0.8.8. 
* gnu/packages/cran.scm (r-reshape): Update to 0.8.8.
 2018-10-30 21:44:48 +01:00
Ricardo Wurmus
ecdfca05c8
gnu: r-ffbase: Update to 0.12.5. 
* gnu/packages/cran.scm (r-ffbase): Update to 0.12.5.
 2018-10-30 21:44:38 +01:00
Ricardo Wurmus
674c818560
gnu: r-rcpp: Update to 0.12.19. 
* gnu/packages/cran.scm (r-rcpp): Update to 0.12.19.
 2018-10-30 21:44:28 +01:00
Ricardo Wurmus
0ab28e5450
gnu: r-pkgload: Update to 1.0.1. 
* gnu/packages/cran.scm (r-pkgload): Update to 1.0.1.
 2018-10-30 21:43:38 +01:00
Ricardo Wurmus
2657e666cb
gnu: r-pkgbuild: Update to 1.0.2. 
* gnu/packages/cran.scm (r-pkgbuild): Update to 1.0.2.
[propagated-inputs]: Add r-cli and r-prettyunits.
 2018-10-30 21:43:28 +01:00
Ricardo Wurmus
7e127ab128
gnu: r-ps: Update to 1.2.0. 
* gnu/packages/cran.scm (r-ps): Update to 1.2.0.
 2018-10-30 21:43:19 +01:00
Ricardo Wurmus
b62e104b84
gnu: r-ape: Update to 5.2. 
* gnu/packages/cran.scm (r-ape): Update to 5.2.
 2018-10-30 21:43:10 +01:00
Ricardo Wurmus
1c9906c2dd
gnu: r-reprex: Update to 0.2.1. 
* gnu/packages/cran.scm (r-reprex): Update to 0.2.1.
[propagated-inputs]: Add r-fs, remove r-knitr.
 2018-10-30 21:42:59 +01:00
Ricardo Wurmus
6b451c0801
gnu: r-gprofiler: Update to 0.6.7. 
* gnu/packages/bioinformatics.scm (r-gprofiler): Update to 0.6.7.
 2018-10-30 21:42:48 +01:00
Ricardo Wurmus
4fc6609a0c
gnu: r-keggrest: Update to 1.20.2. 
* gnu/packages/bioinformatics.scm (r-keggrest): Update to 1.20.2.
 2018-10-30 21:42:39 +01:00
Ricardo Wurmus
67cfb83ff1
gnu: r-msnbase: Update to 2.6.4. 
* gnu/packages/bioinformatics.scm (r-msnbase): Update to 2.6.4.
 2018-10-30 21:42:31 +01:00
Ricardo Wurmus
807d961cc9
gnu: r-methylkit: Update to 1.6.3. 
* gnu/packages/bioinformatics.scm (r-methylkit): Update to 1.6.3.
 2018-10-30 21:42:20 +01:00
Ricardo Wurmus
ac0166450d
gnu: r-wgcna: Update to 1.66. 
* gnu/packages/bioinformatics.scm (r-wgcna): Update to 1.66.
 2018-10-30 21:42:09 +01:00
Ricardo Wurmus
1182460750
gnu: r-go-db: Update to 3.6.0. 
* gnu/packages/bioinformatics.scm (r-go-db): Update to 3.6.0.
 2018-10-30 21:42:00 +01:00
Ricardo Wurmus
466bf3af89
gnu: r-genomicfeatures: Update to 1.32.3. 
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.32.3.
 2018-10-30 21:41:12 +01:00
Ricardo Wurmus
dd0216e0e7
gnu: r-delayedarray: Update to 0.6.6. 
* gnu/packages/bioinformatics.scm (r-delayedarray): Update to 0.6.6.
 2018-10-30 21:40:57 +01:00
Ricardo Wurmus
72408357fa
gnu: r-genomicranges: Update to 1.32.7. 
* gnu/packages/bioinformatics.scm (r-genomicranges): Update to 1.32.7.
 2018-10-30 21:40:48 +01:00
Ricardo Wurmus
9dad1957ab
gnu: r-limma: Update to 3.36.5. 
* gnu/packages/bioinformatics.scm (r-limma): Update to 3.36.5.
 2018-10-30 21:40:40 +01:00
Ricardo Wurmus
57cf6a14f0
gnu: r-edger: Update to 3.22.5. 
* gnu/packages/bioinformatics.scm (r-edger): Update to 3.22.5.
 2018-10-30 21:40:32 +01:00
Ricardo Wurmus
eb890466fa
gnu: r-genomeinfodbdata: Update to 1.1.0. 
* gnu/packages/bioinformatics.scm (r-genomeinfodbdata): Update to 1.1.0.
 2018-10-30 21:40:22 +01:00
Ricardo Wurmus
e563acb96b
gnu: r-iranges: Update to 2.14.12. 
* gnu/packages/bioinformatics.scm (r-iranges): Update to 2.14.12.
 2018-10-30 21:40:12 +01:00
Ricardo Wurmus
192c19f484
gnu: r-vegan: Update to 2.5-3. 
* gnu/packages/bioinformatics.scm (r-vegan): Update to 2.5-3.
 2018-10-30 21:40:00 +01:00
Ricardo Wurmus
696e1ce263
gnu: r-graph: Update to 1.58.2. 
* gnu/packages/bioconductor.scm (r-graph): Update to 1.58.2.
 2018-10-30 21:39:50 +01:00
Ricardo Wurmus
6ab5670aba
gnu: r-nloptr: Update to 1.2.1. 
* gnu/packages/statistics.scm (r-nloptr): Update to 1.2.1.
[native-inputs]: Add r-knitr and gfortran.
 2018-10-30 21:39:39 +01:00
Ricardo Wurmus
c5bd8a7c23
gnu: r-devtools: Update to 2.0.1. 
* gnu/packages/statistics.scm (r-devtools): Update to 2.0.1.
[propagated-inputs]: Remove r-whisker; add r-callr, r-cli, r-pkgbuild,
r-pkgload, r-rcmdcheck, r-remotes, r-sessioninfo, and r-usethis.
 2018-10-30 21:39:29 +01:00
Ricardo Wurmus
aa99568639
gnu: r-evaluate: Update to 0.12. 
* gnu/packages/statistics.scm (r-evaluate): Update to 0.12.
[propagated-inputs]: Remove r-stringr.
 2018-10-30 21:39:16 +01:00
Ricardo Wurmus
60aac7ec16
gnu: r-robustbase: Update to 0.93-3. 
* gnu/packages/statistics.scm (r-robustbase): Update to 0.93-3.
 2018-10-30 21:39:06 +01:00
Ricardo Wurmus
16508df1d3
gnu: r-cardata: Update to 3.0-2. 
* gnu/packages/statistics.scm (r-cardata): Update to 3.0-2.
 2018-10-30 21:38:55 +01:00
Ricardo Wurmus
98a4b9d040
gnu: r-zoo: Update to 1.8-4. 
* gnu/packages/statistics.scm (r-zoo): Update to 1.8-4.
 2018-10-30 21:38:35 +01:00
Ricardo Wurmus
834f203c07
gnu: r-tidyselect: Update to 0.2.5. 
* gnu/packages/statistics.scm (r-tidyselect): Update to 0.2.5.
 2018-10-30 21:38:25 +01:00
Ricardo Wurmus
33fb92aacd
gnu: r-doparallel: Update to 1.0.14. 
* gnu/packages/statistics.scm (r-doparallel): Update to 1.0.14.
 2018-10-30 21:38:16 +01:00
Ricardo Wurmus
3ea7aefd59
gnu: r-snow: Update to 0.4-3. 
* gnu/packages/statistics.scm (r-snow): Update to 0.4-3.
 2018-10-30 21:38:03 +01:00
Ricardo Wurmus
62a7492c90
gnu: r-plotrix: Update to 3.7-4. 
* gnu/packages/statistics.scm (r-plotrix): Update to 3.7-4.
 2018-10-30 21:37:53 +01:00
Ricardo Wurmus
943cab4f72
gnu: r-rstudioapi: Update to 0.8. 
* gnu/packages/statistics.scm (r-rstudioapi): Update to 0.8.
 2018-10-30 21:37:35 +01:00
Ricardo Wurmus
960425c9e3
gnu: r-commonmark: Update to 1.6. 
* gnu/packages/statistics.scm (r-commonmark): Update to 1.6.
 2018-10-30 21:37:25 +01:00
Ricardo Wurmus
e028eaa992
gnu: r-coda: Update to 0.19-2. 
* gnu/packages/statistics.scm (r-coda): Update to 0.19-2.
 2018-10-30 21:37:14 +01:00
Ricardo Wurmus
672ba7494b
gnu: r-data-table: Update to 1.11.8. 
* gnu/packages/statistics.scm (r-data-table): Update to 1.11.8.
 2018-10-30 21:37:03 +01:00
Ricardo Wurmus
f75ee8c691
gnu: r-dplyr: Update to 0.7.7. 
* gnu/packages/statistics.scm (r-dplyr): Update to 0.7.7.
 2018-10-30 21:36:54 +01:00
Ricardo Wurmus
17f6198f06
gnu: r-rlang: Update to 0.3.0.1. 
* gnu/packages/statistics.scm (r-rlang): Update to 0.3.0.1.
 2018-10-30 21:36:44 +01:00
Ricardo Wurmus
822863f8f9
gnu: r-r6: Update to 2.3.0. 
* gnu/packages/statistics.scm (r-r6): Update to 2.3.0.
 2018-10-30 21:36:35 +01:00
Ricardo Wurmus
3a83251c4f
gnu: r-testthat: Update to 2.0.1. 
* gnu/packages/statistics.scm (r-testthat): Update to 2.0.1.
 2018-10-30 21:36:24 +01:00
Ricardo Wurmus
cb448dd251
gnu: r-microbenchmark: Update to 1.4-6. 
* gnu/packages/statistics.scm (r-microbenchmark): Update to 1.4-6.
 2018-10-30 21:36:13 +01:00
Ricardo Wurmus
9f7438355d
gnu: r-mine: Update to 0.6. 
* gnu/packages/statistics.scm (r-mine): Update to 0.6.
 2018-10-30 21:36:04 +01:00
Ricardo Wurmus
9413424d2d
gnu: r-ggplot2: Update to 3.1.0. 
* gnu/packages/statistics.scm (r-ggplot2): Update to 3.1.0.
 2018-10-30 21:35:52 +01:00
Ricardo Wurmus
058394967c
gnu: r-digest: Update to 0.6.18. 
* gnu/packages/statistics.scm (r-digest): Update to 0.6.18.
 2018-10-30 21:35:40 +01:00
Ricardo Wurmus
b85f805090
gnu: r-mgcv: Update to 1.8-25. 
* gnu/packages/statistics.scm (r-mgcv): Update to 1.8-25.
 2018-10-30 21:35:26 +01:00
Ricardo Wurmus
2f5e8f6094
gnu: r-mass: Update to 7.3-51. 
* gnu/packages/statistics.scm (r-mass): Update to 7.3-51.
 2018-10-30 21:35:12 +01:00
Ricardo Wurmus
2ea75a8369
gnu: Add r-npsurv. 
* gnu/packages/cran.scm (r-npsurv): New variable.
 2018-10-30 21:35:03 +01:00
Ricardo Wurmus
7c7ee6cf4c
gnu: Add r-lsei. 
* gnu/packages/cran.scm (r-lsei): New variable.
 2018-10-30 21:34:55 +01:00
Ricardo Wurmus
74cc74e434
gnu: Add r-summarytools. 
* gnu/packages/cran.scm (r-summarytools): New variable.
 2018-10-30 21:34:45 +01:00
Ricardo Wurmus
319a80ce96
gnu: Add r-pander. 
* gnu/packages/cran.scm (r-pander): New variable.
 2018-10-30 21:34:35 +01:00
Ricardo Wurmus
9b02d1a11e
gnu: Add r-rapportools. 
* gnu/packages/cran.scm (r-rapportools): New variable.
 2018-10-30 21:34:25 +01:00
Ricardo Wurmus
5df4e27fec
gnu: Add r-rcmdcheck. 
* gnu/packages/cran.scm (r-rcmdcheck): New variable.
 2018-10-30 21:34:15 +01:00
Ricardo Wurmus
7d8f34707a
gnu: Add r-xopen. 
* gnu/packages/cran.scm (r-xopen): New variable.
 2018-10-30 21:34:05 +01:00
Ricardo Wurmus
cbc8e6dd4a
gnu: Add r-remotes. 
* gnu/packages/cran.scm (r-remotes): New variable.
 2018-10-30 21:33:56 +01:00
Ricardo Wurmus
993426244e
gnu: Add r-sessioninfo. 
* gnu/packages/cran.scm (r-sessioninfo): New variable.
 2018-10-30 21:33:47 +01:00
Ricardo Wurmus
efefd3ec42
gnu: Add r-usethis. 
* gnu/packages/cran.scm (r-usethis): New variable.
 2018-10-30 21:33:37 +01:00
Ricardo Wurmus
153e5b2ddc
gnu: Add r-clisymbols. 
* gnu/packages/cran.scm (r-clisymbols): New variable.
 2018-10-30 21:33:25 +01:00