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6698 Commits

Author SHA1 Message Date
Ricardo Wurmus
3772cd0a08
gnu: r-ggvenndiagram: Update to 1.2.3. 
* gnu/packages/cran.scm (r-ggvenndiagram): Update to 1.2.3.
 2023-08-28 14:22:45 +02:00
Ricardo Wurmus
40d5e645b0
gnu: r-ggpp: Update to 0.5.4. 
* gnu/packages/cran.scm (r-ggpp): Update to 0.5.4.
 2023-08-28 14:22:45 +02:00
Ricardo Wurmus
b07c1ce95d
gnu: r-fontawesome: Update to 0.5.2. 
* gnu/packages/cran.scm (r-fontawesome): Update to 0.5.2.
 2023-08-28 14:22:45 +02:00
Ricardo Wurmus
01614a293c
gnu: r-zcompositions: Update to 1.4.1. 
* gnu/packages/cran.scm (r-zcompositions): Update to 1.4.1.
 2023-08-28 14:22:45 +02:00
Ricardo Wurmus
cc47a62c71
gnu: r-v8: Update to 4.3.3. 
* gnu/packages/cran.scm (r-v8): Update to 4.3.3.
 2023-08-28 14:22:45 +02:00
Ricardo Wurmus
58d9ca4fa8
gnu: r-bestnormalize: Update to 1.9.1. 
* gnu/packages/cran.scm (r-bestnormalize): Update to 1.9.1.
 2023-08-28 14:22:45 +02:00
Ricardo Wurmus
23538ce8fc
gnu: r-emdist: Update to 0.3-3. 
* gnu/packages/cran.scm (r-emdist): Update to 0.3-3.
 2023-08-28 14:22:45 +02:00
Ricardo Wurmus
98315e1997
gnu: r-castor: Update to 1.7.11. 
* gnu/packages/cran.scm (r-castor): Update to 1.7.11.
 2023-08-28 14:22:45 +02:00
Ricardo Wurmus
af2d5c0da1
gnu: r-flexdashboard: Update to 0.6.2. 
* gnu/packages/cran.scm (r-flexdashboard): Update to 0.6.2.
[source]: Remove unnecessary module import.
[native-inputs]: Replace label for esbuild; add comments; update
js-featherlight to 1.3.5.
 2023-08-28 14:22:45 +02:00
Ricardo Wurmus
cce45c2c0d
gnu: r-magick: Update to 2.7.5. 
* gnu/packages/cran.scm (r-magick): Update to 2.7.5.
[properties]: Protect imagemagick input from updater.
[inputs]: Add pcre2.
 2023-08-28 14:22:45 +02:00
Ricardo Wurmus
382eba2656
gnu: r-shinytree: Update to 0.3.1. 
* gnu/packages/cran.scm (r-shinytree): Update to 0.3.1.
[source]: Simplify snippet.
[arguments]: Use esbuild for minification; drop trailing #T from build phase.
[native-inputs]: Replace node-uglify-js with esbuild.
 2023-08-28 14:22:44 +02:00
Ricardo Wurmus
3a2f1d98eb
gnu: r-bookdown: Update to 0.35. 
* gnu/packages/cran.scm (r-bookdown): Update to 0.35.
[properties]: Prevent updater from adding r-knitr.
 2023-08-28 14:22:44 +02:00
Ricardo Wurmus
f260c878c0
gnu: r-colourpicker: Update to 1.3.0. 
* gnu/packages/cran.scm (r-colourpicker): Update to 1.3.0.
[source]: Delete minified JavaScript files.
[arguments]: Do not delete JavaScript files in build phase.
 2023-08-28 14:22:44 +02:00
Ricardo Wurmus
1d325d1fdb
gnu: r-bslib: Update to 0.5.1. 
* gnu/packages/cran.scm (r-bslib): Update to 0.5.1.
[source]: Delete more minified JavaScript files.
[arguments]: Adjust JavaScript build code.
[native-inputs]: Update typescript-components repository.
 2023-08-28 14:22:44 +02:00
Ricardo Wurmus
95966cd5fa
gnu: r-future-callr: Update to 0.8.2. 
* gnu/packages/cran.scm (r-future-callr): Update to 0.8.2.
[properties]: Protect r-markdown from updater.
 2023-08-28 14:22:44 +02:00
Ricardo Wurmus
c7c7dfcfa6
gnu: r-curl: Update to 5.0.2. 
* gnu/packages/cran.scm (r-curl): Update to 5.0.2.
[properties]: Protect "curl" input from updater.
 2023-08-28 14:22:44 +02:00
Ricardo Wurmus
7fa2aacade
gnu: r-proj4: Update to 1.0-13. 
* gnu/packages/cran.scm (r-proj4): Update to 1.0-13.
 2023-08-28 14:22:44 +02:00
Navid Afkhami
058ce073da
gnu: Add r-ggstatsplot. 
* gnu/packages/cran.scm (r-ggstatsplot): New variable.
 2023-08-28 10:39:00 +02:00
Navid Afkhami
ffa3355458
gnu: Add r-correlation. 
* gnu/packages/cran.scm (r-correlation): New variable.
 2023-08-28 10:39:00 +02:00
Navid Afkhami
47f69a881a
gnu: Add r-statsexpressions. 
* gnu/packages/cran.scm (r-statsexpressions): New variable.
 2023-08-28 10:38:07 +02:00
Navid Afkhami
9892efde37
gnu: Add r-wrs2. 
* gnu/packages/cran.scm (r-wrs2): New variable.
 2023-08-28 10:38:07 +02:00
Navid Afkhami
458832c16e
gnu: Add r-mc2d. 
* gnu/packages/cran.scm (r-mc2d): New variable.
 2023-08-28 10:38:07 +02:00
Ricardo Wurmus
3b92730212
gnu: r-oompadata: Update home page to HTTPS. 
* gnu/packages/cran.scm (r-oompadata)[home-page]: Use HTTPS.
 2023-08-28 10:29:43 +02:00
Navid Afkhami
32cdced051
gnu: Add r-oompabase. 
* gnu/packages/cran.scm (r-oompabase): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2023-08-28 10:29:26 +02:00
Navid Afkhami
48d90820e4
gnu: Add r-oompadata. 
* gnu/packages/cran.scm (r-oompadata): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2023-08-28 10:25:50 +02:00
Navid Afkhami
aaf261cc8c
gnu: Add r-earlywarnings. 
* gnu/packages/cran.scm (r-earlywarnings): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2023-08-28 10:01:17 +02:00
Navid Afkhami
432cf5b449
gnu: Add r-tgp. 
* gnu/packages/cran.scm (r-tgp): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2023-08-28 09:58:06 +02:00
Navid Afkhami
2dc030f38f
gnu: Add r-maptree. 
* gnu/packages/cran.scm (r-maptree): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2023-08-28 09:54:46 +02:00
Efraim Flashner
d622d6bb54
gnu: r-rsvg: Build with librsvg-for-system. 
* gnu/packages/cran.scm (r-rsvg)[inputs]: Replace librsvg with
librsvg-for-system.
 2023-08-15 05:45:46 +03:00
Navid Afkhami
3775006f24
gnu: Add r-partr2. 
* gnu/packages/bioinformatics.scm (r-partr2): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2023-08-11 00:32:42 +02:00
Ricardo Wurmus
a1dcbb3fb5
gnu: Add r-morpho. 
* gnu/packages/cran.scm (r-morpho): New variable.
 2023-07-31 11:47:27 +02:00
Ricardo Wurmus
9bf147945e
gnu: Add r-rvcg. 
* gnu/packages/cran.scm (r-rvcg): New variable.
 2023-07-31 11:47:27 +02:00
Ricardo Wurmus
cc14e04c8e
gnu: Add r-wheatmap. 
* gnu/packages/cran.scm (r-wheatmap): New variable.
 2023-07-23 23:08:47 +02:00
Ricardo Wurmus
871cb5295c
gnu: Add r-setrng. 
* gnu/packages/cran.scm (r-setrng): New variable.
 2023-07-23 23:08:47 +02:00
Ricardo Wurmus
1b48d723bd
gnu: Add r-logistf. 
* gnu/packages/cran.scm (r-logistf): New variable.
 2023-07-19 13:09:32 +02:00
Ricardo Wurmus
c31eea21dd
gnu: Add r-formula-tools. 
* gnu/packages/cran.scm (r-formula-tools): New variable.
 2023-07-19 13:09:25 +02:00
Ricardo Wurmus
5f6daad3c8
gnu: Add r-operator-tools. 
* gnu/packages/cran.scm (r-operator-tools): New variable.
 2023-07-19 13:09:03 +02:00
Ricardo Wurmus
4415a421c4
gnu: Add r-uchardet. 
* gnu/packages/cran.scm (r-uchardet): New variable.
 2023-07-19 13:08:47 +02:00
Ricardo Wurmus
ff6b2a88c4
gnu: Add r-gwasexacthw. 
* gnu/packages/cran.scm (r-gwasexacthw): New variable.
 2023-07-19 13:08:02 +02:00
Nicolas Goaziou
7a18bd9e74
gnu: Rationalize texlive-updmap.cfg and texlive-tiny inputs. 
TEXLIVE-UPDMAP.CFG and TEXLIVE-TINY should only be used as native inputs.
Also remove texlive packages already provided by them.

* doc/build.scm (pdf-manual):
* gnu/packages/algebra.scm (pari-gp):
* gnu/packages/bioinformatics.scm (discrover):
(phyml):
(velvet):
* gnu/packages/chemistry.scm (yaehmop):
* gnu/packages/chez.scm (stex-bootstrap):
(chez-web):
(chez-sockets):
* gnu/packages/cran.scm (r-prereg):
* gnu/packages/docbook.scm (dblatex):
* gnu/packages/emacs-xyz.scm (emacs-auctex):
* gnu/packages/engineering.scm (fastcap):
* gnu/packages/fsf.scm (book-faif):
* gnu/packages/graphviz.scm (dot2tex):
* gnu/packages/maths.scm (hypre):
* gnu/packages/ocaml.scm (unison):
(ocaml-bibtex2html):
* gnu/packages/plotutils.scm (asymptote):
* gnu/packages/python-xyz.scm (python-nbconvert):
(python-pypandoc):
* gnu/packages/radio.scm (gnuradio):
(libosmo-dsp):
* gnu/packages/statistics.scm (r-with-tests):
* gnu/packages/tex.scm (texlive-makecmds):
(texlive-innerscript):
(teximpatient):
(texlive-xkeyval): Remove texlive packages already provided by
TEXLIVE-UPDMAP.CFG.  Don't add TEXLIVE-TINY or TEXLIVE-UPDMAP.CFG as inputs.
 2023-07-18 18:16:47 +02:00
Nicolas Goaziou
06bc5b28b0
gnu: texlive-latex-threeparttable -> texlive-threeparttable. 
* gnu/packages/tex.scm (texlive-threeparttable): New variable.
(texlive-latex-threeparttable): Deprecate variable.
* gnu/packages/cran.scm (r-prereg)[propagated-inputs]: Use new name.  Re-order alphabetically.
 2023-07-18 18:10:55 +02:00
Nicolas Goaziou
9550a20361
gnu: texlive-latex-upquote -> texlive-upquote. 
* gnu/packages/tex.scm (texlive-upquote): New variable.
(texlive-latex-upquote): Deprecate variable.
* gnu/packages/cran.scm (r-prereg):
* gnu/packages/maths.scm (hypre):
* gnu/packages/python-xyz.scm (python-nbconvert):
* gnu/packages/sphinx.scm (python-sphinx):
* gnu/packages/statistics.scm (r-with-tests): Use new name.
 2023-07-18 18:10:46 +02:00
Nicolas Goaziou
9e4adea8ad
gnu: texlive-latex-geometry -> texlive-geometry. 
* gnu/packages/tex.scm (texlive-geometry): New variable.
(texlive-latex-geometry): Deprecate variable.
(texlive-xindy):
* gnu/packages/chemistry.scm (yaehmop):
* gnu/packages/cran.scm (r-prereg):
* gnu/packages/graphviz.scm (dot2tex):
* gnu/packages/maths.scm (hypre):
* gnu/packages/plotutils.scm (asymptote):
* gnu/packages/python-xyz.scm (python-nbconvert):
* gnu/packages/sphinx.scm (python-sphinx): Use new name.
 2023-07-18 18:10:44 +02:00
Ricardo Wurmus
8029b180bd
gnu: r-ggh4x: Update to 0.2.5. 
* gnu/packages/cran.scm (r-ggh4x): Update to 0.2.5.
 2023-07-17 14:19:53 +02:00
Ricardo Wurmus
a28d88e847
gnu: r-stars: Update to 0.6-2. 
* gnu/packages/cran.scm (r-stars): Update to 0.6-2.
 2023-07-17 14:19:53 +02:00
Ricardo Wurmus
f702efa97e
gnu: r-seewave: Update to 2.2.1. 
* gnu/packages/cran.scm (r-seewave): Update to 2.2.1.
 2023-07-17 14:19:53 +02:00
Ricardo Wurmus
4a6843b3b3
gnu: r-sccore: Update to 1.0.4. 
* gnu/packages/cran.scm (r-sccore): Update to 1.0.4.
 2023-07-17 14:19:53 +02:00
Ricardo Wurmus
2824b8949d
gnu: r-sf: Update to 1.0-14. 
* gnu/packages/cran.scm (r-sf): Update to 1.0-14.
[inputs]: Add curl, openssh, openssl, pcre2, and zlib.
 2023-07-17 14:19:53 +02:00
Ricardo Wurmus
fa0788a9b4
gnu: r-longdat: Update to 1.1.2. 
* gnu/packages/cran.scm (r-longdat): Update to 1.1.2.
 2023-07-17 14:19:53 +02:00
Ricardo Wurmus
b071105584
gnu: r-tidytree: Update to 0.4.4. 
* gnu/packages/cran.scm (r-tidytree): Update to 0.4.4.
 2023-07-17 14:19:52 +02:00