Ricardo Wurmus
b55630a3a8
gnu: Add ghc-conduit.
...
* gnu/packages/haskell.scm (ghc-conduit): New variable.
2015-12-10 14:34:51 +01:00
Ricardo Wurmus
1300634bf1
gnu: Add ghc-hspec-contrib.
...
* gnu/packages/haskell.scm (ghc-hspec-contrib): New variable.
2015-12-10 14:34:51 +01:00
Ricardo Wurmus
cb31771f84
gnu: Add ghc-aeson-qq.
...
* gnu/packages/haskell.scm (ghc-aeson-qq): New variable.
2015-12-10 14:34:51 +01:00
Ricardo Wurmus
3611fc7bff
gnu: Add ghc-haskell-src-meta.
...
* gnu/packages/haskell.scm (ghc-haskell-src-meta): New variable.
2015-12-10 14:34:50 +01:00
Ricardo Wurmus
2e67725150
gnu: Add ghc-th-orphans.
...
* gnu/packages/haskell.scm (ghc-th-orphans): New variable.
2015-12-10 14:34:50 +01:00
Ricardo Wurmus
536b84a832
gnu: Add ghc-th-reify-many.
...
* gnu/packages/haskell.scm (ghc-th-reify-many): New variable.
2015-12-10 14:34:50 +01:00
Ricardo Wurmus
25101be9dc
gnu: Add ghc-th-expand-syns.
...
* gnu/packages/haskell.scm (ghc-th-expand-syns): New variable.
2015-12-10 14:34:50 +01:00
Ricardo Wurmus
1777e1f2cb
gnu: Add ghc-th-lift.
...
* gnu/packages/haskell.scm (ghc-th-lift): New variable.
2015-12-10 14:34:50 +01:00
Ricardo Wurmus
74d9f72e02
gnu: Add ghc-packedstring.
...
* gnu/packages/haskell.scm (ghc-packedstring): New variable.
2015-12-10 14:34:50 +01:00
Ricardo Wurmus
5de6eedc60
gnu: Add ghc-enclosed-exceptions.
...
* gnu/packages/haskell.scm (ghc-enclosed-exceptions): New variable.
2015-12-10 14:34:50 +01:00
Ricardo Wurmus
25b20a9c7a
gnu: Add ghc-executable-path.
...
* gnu/packages/haskell.scm (ghc-executable-path): New variable.
2015-12-10 14:34:50 +01:00
Ricardo Wurmus
31be270b93
gnu: Add ghc-cmark.
...
* gnu/packages/haskell.scm (ghc-cmark): New variable.
2015-12-10 14:34:50 +01:00
Ricardo Wurmus
66c480b6c8
gnu: Add ghc-highlighting-kate.
...
* gnu/packages/haskell.scm (ghc-highlighting-kate): New variable.
2015-12-10 14:34:50 +01:00
Ricardo Wurmus
05245dc9ff
gnu: Add ghc-diff.
...
* gnu/packages/haskell.scm (ghc-diff): Add variable.
2015-12-10 14:34:50 +01:00
Ricardo Wurmus
a54d11b58f
gnu: Add ghc-regex-pcre-builtin.
...
* gnu/packages/haskell.scm (ghc-regex-pcre-builtin): New variable.
2015-12-10 14:34:50 +01:00
Ricardo Wurmus
ef2861b1d9
gnu: Add ghc-texmath.
...
* gnu/packages/haskell.scm (ghc-texmath): New variable.
2015-12-10 14:34:50 +01:00
Ricardo Wurmus
8164d58ec7
gnu: Add ghc-pandoc-types.
...
* gnu/packages/haskell.scm (ghc-pandoc-types): New variable.
2015-12-10 14:34:50 +01:00
Ricardo Wurmus
4cbd9f5993
gnu: Add ghc-deepseq-generics.
...
* gnu/packages/haskell.scm (ghc-deepseq-generics): New variable.
2015-12-10 14:34:50 +01:00
Ricardo Wurmus
6ff4a50d75
gnu: ghc-aeson: Propagate input.
...
* gnu/packages/haskell.scm (ghc-aeson)[inputs]: Move
"ghc-unordered-containers" from here ...
[propagated-inputs]: ... to here.
2015-12-10 14:34:50 +01:00
Ricardo Wurmus
172bb3b86d
gnu: ghc-haskell-src-exts: Propagate some inputs.
...
* gnu/packages/haskell.scm (ghc-haskell-src-exts)[inputs]: Remove field.
[propagated-inputs]: Move "cpphs", "ghc-mtl", "ghc-happy", and "ghc-syb"
from inputs field here.
[native-inputs]: Move "ghc-smallcheck", "ghc-tasty",
"ghc-tasty-smallcheck", and "ghc-tasty-golden" from inputs field here.
2015-12-10 14:34:50 +01:00
Alex Kost
2e74b9f4cf
gnu: emacs-w3m: Update to 1.4.538+0.20141022.
...
* gnu/packages/emacs.scm (emacs-w3m): Update to 1.4.538+0.20141022.
[arguments]: Use '--without-compress-install' configure flag.
2015-12-10 13:24:49 +03:00
Alex Kost
932ece6553
gnu: emacs-w3m: Use 'modify-syntax'.
...
* gnu/packages/emacs.scm (emacs-w3m)[arguments]: Use 'modify-syntax'.
2015-12-10 13:23:50 +03:00
Efraim Flashner
6b6a0b143d
gnu: youtube-dl: Update to 2015.12.09.
...
* gnu/packages/video.scm (youtube-dl): Update to 2015.12.09.
[native-inputs]: Move python-setuptools here.
2015-12-09 23:05:54 +02:00
Efraim Flashner
fa09215342
gnu: vte: Update to 0.42.1.
...
* gnu/packages/gnome.scm (vte): Update to 0.42.1.
2015-12-09 22:57:57 +02:00
Efraim Flashner
896dcbc77c
gnu: libsecret: Update to 0.18.3.
...
* gnu/packages/gnome.scm (libsecret): Update to 0.18.3.
2015-12-09 22:48:39 +02:00
Efraim Flashner
5e8aec2cf3
gnu: libgnome-keyring: Update to 3.12.0.
...
* gnu/packages/gnome.scm (libgnome-keyring): Update to 3.12.0.
2015-12-09 22:48:39 +02:00
Efraim Flashner
cc9553562c
gnu: gmime: Update to 2.6.20.
...
* gnu/packages/mail.scm (gmime): Update to 2.6.20.
[arguments]: Use modify-phases syntax.
2015-12-09 15:21:34 +02:00
Ludovic Courtès
8d5e7ad29a
gnu: guile-sly: Use HTTPS URL.
...
* gnu/packages/guile.scm (guile-sly)[source]: Use 'https'. Failing to
do that, we get redirected to 'https', which fails because GnuTLS is
missing.
2015-12-08 23:58:12 +01:00
Andreas Enge
7fbee931a5
gnu: python-pillow: Update to 3.0.0.
...
* gnu/packages/python.scm (python-pillow, python2-pillow): Update to 3.0.0.
2015-12-08 23:16:37 +01:00
Andreas Enge
b00150641a
gnu: numactl: Update to 2.0.10.
...
* gnu/packages/linux.scm (numactl)[source]: Update to 2.0.10.
[arguments]: Adapt phases to use the autotools machinery.
[native-inputs]: Add autotools packages.
2015-12-08 23:09:59 +01:00
Efraim Flashner
f714d9fe04
gnu: glade3: Update to 3.8.5.
...
* gnu/packages/gnome.scm (glade3): Update to 3.8.5.
2015-12-08 15:05:25 +02:00
Efraim Flashner
20a1a4c322
gnu: autogen: Update to 5.18.7.
...
* gnu/packages/autogen.scm (autogen): Update to 5.18.7.
2015-12-08 14:30:29 +02:00
David Thompson
1eca745b44
gnu: node: Do not use bundled dependencies.
...
The Node build system was previously building its own copies of
OpenSSL (yikes!), libuv, and zlib.
* gnu/packages/node.scm (node)[inputs]: Add openssl, libuv, and zlib.
[arguments]: Add configure flags for using system libraries. Use
'modify-phases' syntax.
2015-12-07 17:05:34 -05:00
Leo Famulari
437d728632
gnu: util-linux: Make description more descriptive.
...
* gnu/packages/linux.scm (util-linux)[description]: Give some more
information about the package.
Signed-off-by: Andreas Enge <andreas@enge.fr>
2015-12-07 21:11:21 +01:00
Mark H Weaver
dae36ca558
gnu: pcre: Update to 8.38.
...
* gnu/packages/pcre.scm (pcre): Update to 8.38. Add source URI for
main FTP site.
2015-12-07 09:54:01 -05:00
Mark H Weaver
821060f3f6
gnu: libxml2: Update to 2.9.3.
...
* gnu/packages/patches/libxml2-CVE-2015-1819.patch,
gnu/packages/patches/libxml2-CVE-2015-7941-pt1.patch,
gnu/packages/patches/libxml2-CVE-2015-7941-pt2.patch,
gnu/packages/patches/libxml2-CVE-2015-7942-pt1.patch,
gnu/packages/patches/libxml2-CVE-2015-7942-pt2.patch,
gnu/packages/patches/libxml2-CVE-2015-8035.patch,
gnu/packages/patches/libxml2-bug-737840.patch,
gnu/packages/patches/libxml2-bug-738805.patch,
gnu/packages/patches/libxml2-bug-746048.patch,
gnu/packages/patches/libxml2-bug-747437.patch,
gnu/packages/patches/libxml2-bug-751603.patch,
gnu/packages/patches/libxml2-bug-751631.patch,
gnu/packages/patches/libxml2-bug-754946.patch,
gnu/packages/patches/libxml2-bug-754947.patch,
gnu/packages/patches/libxml2-bug-755857.patch,
gnu/packages/patches/libxml2-fix-catalog-corruption.patch,
gnu/packages/patches/libxml2-id-attrs-in-xmlSetTreeDoc.patch,
gnu/packages/patches/libxml2-node-sort-order-pt1.patch,
gnu/packages/patches/libxml2-node-sort-order-pt2.patch: Delete files.
* gnu-system.am (dist_patch_DATA): Remove them.
* gnu/packages/xml.scm (libxml2): Update to 2.9.3. Remove patches.
2015-12-07 09:54:01 -05:00
Mark H Weaver
86c8f1daf8
gnu: openssl: Update to 1.0.2e [fixes CVE-2015-{3193,3194,3195}].
...
* gnu/packages/tls.scm (openssl): Update to 1.0.2e.
[arguments]: Rename 'fix-man-dir' phase to 'patch-Makefile.org',
and patch SHELL in Makefile.org. Add 'fix-broken-symlinks' phase.
Return #t from 'patch-tests' phase.
2015-12-07 09:54:01 -05:00
Efraim Flashner
e5be0e01f2
gnu: keepassx: Update to 2.0.
...
* gnu/packages/password-utils.scm (keepassx): Update to 2.0.
[source]: Change to official release location.
2015-12-07 13:07:18 +02:00
Efraim Flashner
044176621e
gnu: python2-zope-security: Use python2-zope-testrunner.
...
* gnu/packages/python.scm (python2-zope-security): Do it.
2015-12-07 12:31:56 +02:00
Efraim Flashner
b847618f65
gnu: help2man: Update to 1.47.3.
...
* gnu/packages/man.scm (help2man): Update to 1.47.3.
2015-12-07 10:59:54 +02:00
Efraim Flashner
5f47e71343
gnu: libmicrohttpd: Update to 0.9.47.
...
* gnu/packages/gnunet.scm (libmicrohttpd): Update to 0.9.47.
2015-12-07 10:40:05 +02:00
Alex Vong
f8f8897f7e
gnu: mp3info: Update URL.
...
* gnu/packages/mp3.scm (mp3info): Update source URL.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2015-12-06 23:12:12 +01:00
Kyle Meyer
e92b8599f7
gnu: Add myrepos.
...
* gnu/packages/version-control.scm (myrepos): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2015-12-06 22:44:17 +01:00
Kyle Meyer
1872f1bb79
gnu: Add python-docopt.
...
* gnu/packages/python.scm (python-docopt, python2-docopt): New
variables.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2015-12-06 22:38:32 +01:00
Efraim Flashner
07ab3b8ecc
gnu: gajim: Update to 0.16.4.
...
* gnu/packages/messaging.scm (gajim): Update to 0.16.4.
2015-12-06 22:18:01 +02:00
Efraim Flashner
d1d75c6a67
gnu: pinentry: Update to 0.9.6.
...
* gnu/packages/gnupg.scm (pinentry): Update to 0.9.6.
[inputs]: Add libsecret.
2015-12-06 22:18:01 +02:00
Efraim Flashner
231dd02337
gnu: gpgme: Update to 1.6.0.
...
* gnu/packages/gnupg.scm (gpgme): Update to 1.6.0.
2015-12-06 22:18:01 +02:00
Efraim Flashner
b65249cc2b
gnu: gnupg: Update to 2.1.10.
...
* gnu/packages/gnupg.scm (gnupg): Update to 2.1.10.
[inputs]: Add adns.
2015-12-06 22:18:01 +02:00
Efraim Flashner
7b40296fc0
gnu: gnupg-2.0: Update to 2.0.29.
...
* gnu/packages/gnupg.scm (gnupg-2.0): Update to 2.0.29.
[inputs]: Add adns.
2015-12-06 22:18:01 +02:00
Efraim Flashner
b682a77669
gnu: libassuan: Update to 2.4.2.
...
* gnu/packages/gnupg.scm (libassuan): Update to 2.4.2.
2015-12-06 22:18:01 +02:00
Mathieu Lirzin
d4fe27fe2c
gnu: Move pkg-config to native inputs.
...
* gnu/packages/xiph.scm (ao)[native-inputs]: Move pkg-config from
inputs.
* gnu/packages/xorg.scm (xf86-video-geode)[native-inputs]: Likewise.
2015-12-06 17:23:26 +01:00
Efraim Flashner
2f52ad7413
gnu: nano: Update to 2.5.0.
...
* gnu/packages/nano.scm (nano): Update to 2.5.0.
2015-12-06 16:49:41 +02:00
Efraim Flashner
ff21fa8b63
gnu: gdb: Update to 7.10.1.
...
* gnu/packages/gdb.scm (gdb): Update to 7.10.1.
2015-12-06 15:57:33 +02:00
Alex Kost
7edf242967
gnu: manaplus: Update to 1.5.12.5.
...
* gnu/packages/games.scm (manaplus): Update to 1.5.12.5.
2015-12-06 12:46:10 +03:00
Ludovic Courtès
e2e3600fe8
gnu: pius: Update to 2.2.1.
...
* gnu/packages/gnupg.scm (pius): Update to 2.2.1. Change URL to
github.com.
[arguments]: Update pattern for 'gpg' command.
2015-12-05 23:38:02 +01:00
David Thompson
9fd0838b28
gnu: Add letsencrypt.
...
* gnu/packages/tls.scm (letsencrypt): New variable.
2015-12-05 09:44:38 -05:00
Leo Famulari
7890e3baf3
gnu: Add acme.
...
* gnu/packages/tls.scm (acme): New variable.
2015-12-05 09:44:38 -05:00
Leo Famulari
38b8f9b21b
gnu: Add python2-parsedatetime.
...
* gnu/packages/python.scm (python2-parsedatetime): New variable.
2015-12-05 09:44:38 -05:00
Leo Famulari
4df1e30da8
gnu: python-parsedatetime: Update to 1.5.
...
* gnu/packages/python.scm (python-parsedatetime): Update to 1.5.
[arguments]: Enable tests.
2015-12-05 09:44:38 -05:00
Leo Famulari
ab41f9799f
gnu: Add python-ndg-httpsclient.
...
* gnu/packages/python.scm (python-ndg-httpsclient,
python2-ndg-httpsclient): New variables.
2015-12-05 09:44:38 -05:00
Leo Famulari
79e8a2916d
gnu: Add python-configargparse.
...
* gnu/packages/python.scm (python-configargparse,
python2-configargparse): New variables.
2015-12-05 09:44:37 -05:00
Leo Famulari
b5f218be26
gnu: Add python2-pythondialog.
...
* gnu/packages/python.scm (python2-pythondialog): New variable.
2015-12-05 09:44:37 -05:00
Leo Famulari
44298269ba
gnu: Add dialog.
...
* gnu/packages/python.scm (dialog): New variable.
2015-12-05 09:44:37 -05:00
Leo Famulari
99fffa8ae0
gnu: Add python-configobj.
...
* gnu/packages/python.scm (python-configobj, python2-configobj): New
variables.
* gnu/packages/patches/python-configobj-setuptools.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
2015-12-05 09:44:37 -05:00
Leo Famulari
5eea200518
gnu: Add python-werkzeug.
...
* gnu/packages/python.scm (python-werkzeug, python2-werkzeug): New
variables.
2015-12-05 09:44:37 -05:00
Leo Famulari
3859ac12d6
gnu: Add python-pyrfc3339.
...
* gnu/packages/python.scm (python-pyrfc3339, python2-pyrfc3339): New variables.
2015-12-05 09:44:37 -05:00
Leo Famulari
a6b61b271b
gnu: Add python-zope-component.
...
* gnu/packages/python.scm (python-zope-component,
python2-zope-component): New variables.
2015-12-05 09:44:37 -05:00
Leo Famulari
d4b77f3662
gnu: Add python-zope-security.
...
* gnu/packages/python.scm (python-zope-security,
python2-zope-security): New variables.
2015-12-05 09:44:37 -05:00
Leo Famulari
f404b5ea6e
gnu: Add python-zope-location.
...
* gnu/packages/python.scm (python-zope-location, python2-zope-location):
New variables.
2015-12-05 09:44:37 -05:00
Leo Famulari
2ad520866f
gnu: Add python-zope-proxy.
...
* gnu/packages/python.scm (python-zope-proxy, python2-zope-proxy): New
variables.
2015-12-05 09:44:37 -05:00
Leo Famulari
fbac9b178e
gnu: Add python-zope-configuration.
...
* gnu/packages/python.scm (python-zope-configuration,
python2-zope-configuration): New variables.
2015-12-05 09:44:36 -05:00
Leo Famulari
71fb09f326
gnu: Add python-zope-schema.
...
* gnu/packages/python.scm (python-zope-schema, python2-zope-schema): New variables.
2015-12-05 09:44:36 -05:00
Leo Famulari
6a5c710c40
gnu: Add python-zope-i18nmessageid.
...
* gnu/packages/python.scm (python-zope-i18nmessageid,
python2-zope-i18nmessageid): New variables.
2015-12-05 09:44:36 -05:00
Leo Famulari
01614c4fea
gnu: Add python-zope-testrunner.
...
* gnu/packages/python.scm (python-zope-testrunner,
python2-zope-testrunner): New variables.
2015-12-05 09:44:36 -05:00
Leo Famulari
900e3c0e0e
gnu: Add python-zope-testing.
...
* gnu/packages/python.scm (python-zope-testing, python2-zope-testing):
New variables.
2015-12-05 09:44:36 -05:00
Leo Famulari
81f2373cd4
gnu: Add python-zope-exceptions.
...
* gnu/packages/python.scm (python-zope-exceptions,
python2-zope-exceptions): New variables.
2015-12-05 09:44:36 -05:00
Leo Famulari
97abe268ab
gnu: Add python-zope-interface.
...
* gnu/packages/python.scm (python-zope-interface,
python2-zope-interface): New variables.
2015-12-05 09:44:36 -05:00
Leo Famulari
2fc5f18680
gnu: Add python-zope-event.
...
* gnu/packages/python.scm (python-zope-event, python2-zope-event): New
variables.
2015-12-05 09:44:36 -05:00
Mark H Weaver
b9fa245fcd
gnu: icecat: Update to 38.4.0-gnu1.
...
* gnu/packages/patches/icecat-CVE-2015-4513-pt01.patch,
gnu/packages/patches/icecat-CVE-2015-4513-pt02.patch,
gnu/packages/patches/icecat-CVE-2015-4513-pt03.patch,
gnu/packages/patches/icecat-CVE-2015-4513-pt04.patch,
gnu/packages/patches/icecat-CVE-2015-4513-pt05.patch,
gnu/packages/patches/icecat-CVE-2015-4513-pt06.patch,
gnu/packages/patches/icecat-CVE-2015-4513-pt07.patch,
gnu/packages/patches/icecat-CVE-2015-4513-pt08.patch,
gnu/packages/patches/icecat-CVE-2015-4513-pt09.patch,
gnu/packages/patches/icecat-CVE-2015-4513-pt10.patch,
gnu/packages/patches/icecat-CVE-2015-4513-pt11.patch,
gnu/packages/patches/icecat-CVE-2015-7188.patch,
gnu/packages/patches/icecat-CVE-2015-7189.patch,
gnu/packages/patches/icecat-CVE-2015-7193.patch,
gnu/packages/patches/icecat-CVE-2015-7194.patch,
gnu/packages/patches/icecat-CVE-2015-7196.patch,
gnu/packages/patches/icecat-CVE-2015-7197.patch,
gnu/packages/patches/icecat-CVE-2015-7198.patch,
gnu/packages/patches/icecat-CVE-2015-7199.patch: Delete files.
* gnu-system.am (dist_patch_DATA): Remove them.
* gnu/packages/gnuzilla.scm (icecat): Update to 38.4.0-gnu1. Remove the
obsolete patches.
2015-12-04 15:52:16 -05:00
Ludovic Courtès
df7393b93c
gnu: Add findnewest.
...
* gnu/packages/version-control.scm (findnewest): New variable.
2015-12-03 19:09:53 +02:00
Federico Beffa
dab8ebd925
gnu: python2-seaborn: Use custom 'python2-' packages.
...
* gnu/packages/python.scm (python2-seaborn): Use customized 'python2-'
versions of 'matplotlib', 'pandas' and 'scipy'.
2015-12-03 12:49:32 +01:00
Efraim Flashner
d1e08856e0
gnu: openssh: Update to 7.1p1.
...
* gnu/packages/ssh.scm (openssh): Update to 7.1p1.
2015-12-03 13:14:11 +02:00
Alex Kost
c181b870f1
gnu: paredit: Update to 24.
...
* gnu/packages/emacs.scm (paredit): Update to 24.
2015-12-03 13:39:26 +03:00
Alex Kost
509a0c2700
gnu: magit: Update to 2.3.1.
...
* gnu/packages/emacs.scm (magit): Update to 2.3.1.
2015-12-03 13:39:26 +03:00
Alex Kost
fae2a30f13
gnu: emacs-dash: Update to 2.12.1.
...
* gnu/packages/emacs.scm (emacs-dash): Update to 2.12.1.
2015-12-03 13:39:26 +03:00
Alex Kost
eccd0b57a1
gnu: emacs-pdf-tools: Update to 0.70.
...
* gnu/packages/emacs.scm (emacs-pdf-tools): Update to 0.70.
2015-12-03 13:39:26 +03:00
Efraim Flashner
dfbddf81be
gnu: libass: Update to 0.13.1.
...
* gnu/packages/video.scm (libass): Update to 0.13.1.
2015-12-03 11:37:28 +02:00
Efraim Flashner
877a6466a6
gnu: xmlto: Update to 0.0.28.
...
* gnu/packages/xml.scm (xmlto): Update to 0.0.28.
2015-12-03 11:37:28 +02:00
Efraim Flashner
f673552c13
gnu: vapoursynth: Update to 28.
...
* gnu/packages/video.scm (vapoursynth): Update to 28.
2015-12-03 11:37:28 +02:00
Federico Beffa
d9bc0bf8fa
gnu: python2-scikit-image: Use custom 'python2-' packages.
...
* gnu/packages/python.scm (python2-scikit-image): Use customized 'python2-'
versions of 'matplotlib', 'numpy' and 'scipy'.
2015-12-03 09:22:30 +01:00
Federico Beffa
3cbe7d5e52
gnu: python2-pandas: Use custom 'python2-numpy'.
...
* gnu/packages/python.scm (python2-pandas): Do it.
2015-12-03 09:22:30 +01:00
Federico Beffa
5587253a87
gnu: python2-ipython: Use custom 'python2-numpy'.
...
* gnu/packages/python.scm (python2-ipython): Do it.
2015-12-03 09:22:30 +01:00
Mark H Weaver
084e41c1ac
gnu: ffmpeg: Update to 2.8.3 [fixes CVE-2015-{8216,8217,8218,8219}].
...
* gnu/packages/video.scm (ffmpeg): Update to 2.8.3.
2015-12-02 22:39:12 -05:00
Efraim Flashner
7e006b6899
gnu: freeipmpi: Update to 1.5.1.
...
* gnu/packages/freeipmi.scm (freeipmi): Update to 1.5.1.
2015-12-02 20:32:30 +02:00
Federico Beffa
18b3151613
gnu: python-matplotlib: Adjust path to figures in 'info' file.
...
* gnu/packages/python.scm (python-matplotlib): Do it.
2015-12-02 18:21:14 +01:00
Federico Beffa
5d26e542ee
gnu: python-ipython: Don't use the bootstrap version of 'python-numpy'.
...
* gnu/packages/python.scm (python-ipython): Do it.
2015-12-02 18:21:13 +01:00
Federico Beffa
1bbc659fd2
gnu: python-matplotlib: Add 'TkAgg' backend and update to version '1.4.3'.
...
* gnu/packages/python.scm (python-matplotlib, python2-matplotlib): Do it.
* gnu/packages/patches/matplotlib-setupext-tk.patch: New file.
* gnu-system.am (dist_patch_DATA): Add the new patch.
2015-12-02 18:21:13 +01:00
Efraim Flashner
214ed6a39b
gnu: opus: Update to 1.1.1.
...
* gnu/packages/xiph.scm (opus): Update to 1.1.1.
2015-12-02 13:31:06 +02:00
Efraim Flashner
59eef6f284
gnu: libbluray: Update to 0.9.2.
...
* gnu/packages/video.scm (libbluray): Update to 0.9.2.
2015-12-02 13:27:53 +02:00
Efraim Flashner
b6ab89efb2
gnu: python-six: Update to 1.10.0.
...
* gnu/packages/python.scm (python-six): Update to 1.10.0.
[source]: Change uri to pypi format.
2015-12-01 21:10:55 +02:00
Efraim Flashner
b850a6d82d
gnu: python-babel: Update to 2.1.1.
...
* gnu/packages/python.scm (python-babel): Update to 2.1.1.
[source]: Change uri to pypi format.
2015-12-01 20:55:06 +02:00
Efraim Flashner
94ce6b4959
gnu: python-oslo.utils: Update to 3.0.0.
...
* gnu/packages/openstack.scm (python-oslo.utils): Update to 3.0.0.
[source]: Change uri to pypi format.
2015-12-01 19:52:08 +02:00
Efraim Flashner
278c0efd0a
gnu: python-oslo.serialization: Update to 2.0.0.
...
* gnu/packages/openstack.scm (python-oslo.serialization): Update to 2.0.0.
[source]: Change uri to pypi format.
2015-12-01 19:13:25 +02:00
Efraim Flashner
5788b4b6d1
gnu: python-oslo.i18n: Update to 3.0.0.
...
* gnu/packages/openstack.scm (python-oslo.i18n): Update to 3.0.0.
[source]: Change uri to pypi format.
2015-12-01 18:14:56 +02:00
Efraim Flashner
e9af5adfd5
gnu: python-oslo.context: Update to 1.0.0.
...
* gnu/packages/openstack.scm (python-oslo.context): Update to 1.0.0.
[source]: Change uri to pypi format.
2015-12-01 17:33:29 +02:00
Efraim Flashner
3bc810a89b
gnu: python-tempest-lib: Update to 0.11.0.
...
* gnu/packages/openstack.scm (python-tempest-lib): Update to 0.11.0.
2015-12-01 16:19:58 +02:00
Efraim Flashner
2d531d4efd
gnu: python-stevedore: Update to 1.9.0.
...
* gnu/packages/openstack.scm (python-stevedore): Update to 1.9.0.
[source]: Change uri to pypi format.
2015-12-01 16:19:58 +02:00
Efraim Flashner
bd52842d3d
gnu: python-requests-mock: Update to 0.7.0.
...
* gnu/packages/openstack.scm (python-requests-mock): Update to 0.7.0.
[source]: Change uri to pypi format.
2015-12-01 16:19:58 +02:00
Efraim Flashner
a5ff52f8a6
gnu: python-os-client-config: Update to 1.12.0.
...
* gnu/packages/openstack.scm (python-os-client-config): Update to 1.12.0.
[source]: Change uri to pypi format.
2015-12-01 16:19:53 +02:00
Efraim Flashner
56c7ead2f8
gnu: python-debtcollector: Update to 1.0.0.
...
* gnu/packages/openstack.scm (python-debtcollector): Update to 1.0.0.
[source]: Change uri to pypi format.
2015-12-01 16:19:22 +02:00
Efraim Flashner
d4e817b1db
gnu: python-mox3: Update to 0.12.0.
...
* gnu/packages/openstack.scm (python-mox3): Update to 0.12.0.
[source]: Change uri to pypi format.
2015-12-01 16:19:16 +02:00
Efraim Flashner
df372f96a3
gnu: enlightenment: Update to 0.20.0.
...
* gnu/packages/enlightenment.scm (enlightenment): Update to 0.20.0.
[arguments]: Add '--enable-mount-eeze' to configure-flags.
2015-12-01 10:26:06 +02:00
Efraim Flashner
ccd20fcb7d
gnu: python-pbr: Update to 1.8.1.
...
* gnu/packages/openstack.scm (python-pbr): Update to 1.8.1.
2015-11-30 23:20:35 +02:00
Efraim Flashner
5466700fa2
gnu: parallel: Update to 20151122.
...
* gnu/packages/parallel.scm (parallel): Update to 20151122.
2015-11-30 23:11:35 +02:00
Efraim Flashner
44e30a7647
gnu: python2-keyring: Use python2-pycrypto.
...
* gnu/packages/python.scm (python2-keyring)[inputs]: Force building
with python2-pycrypto.
2015-11-30 20:09:12 +02:00
Efraim Flashner
1c0059da41
gnu: python2-pycrypto: Use python2.
...
* gnu/packages/python.scm (python2-pycrypto)[inputs]: Force building
with python2.
2015-11-30 19:06:13 +02:00
Ricardo Wurmus
36f26211bb
gnu: openssh: Install ssh-copy-id.
...
* gnu/packages/ssh.scm (openssh)[arguments]: Install "ssh-copy-id" and
documentation.
Fixes <http://bugs.gnu.org/22024 >.
Reported by Florian Paul Schmidt <mista.tapas@gmx.net>.
2015-11-30 14:58:44 +01:00
Ricardo Wurmus
a9ee11d5ab
gnu: openssh: Use modify-phases syntax.
...
* gnu/packages/ssh.scm (openssh)[arguments]: Use modify-phases syntax.
2015-11-30 14:58:43 +01:00
Ricardo Wurmus
70b002aa1d
gnu: Add ruby-tins.
...
* gnu/packages/ruby.scm (ruby-tins): New variable.
2015-11-30 14:41:48 +01:00
Ricardo Wurmus
d3b20a02c8
gnu: Add ruby-sdoc.
...
* gnu/packages/ruby.scm (ruby-sdoc): New variable.
2015-11-30 14:41:48 +01:00
Ricardo Wurmus
a75bdfcec3
gnu: Add ruby-pry-editline.
...
* gnu/packages/ruby.scm (ruby-pry-editline): New variable.
2015-11-30 14:41:48 +01:00
Ricardo Wurmus
2f9e0b68e1
gnu: Add ruby-ci-reporter.
...
* gnu/packages/ruby.scm (ruby-ci-reporter): New variable.
2015-11-30 14:41:48 +01:00
Ricardo Wurmus
fe1ddad54a
gnu: Add ruby-atoulme-saikuro.
...
* gnu/packages/ruby.scm (ruby-atoulme-saikuro): New variable.
2015-11-30 14:41:48 +01:00
Ricardo Wurmus
a84fa2ad42
gnu: Add ruby-simplecov.
...
* gnu/packages/ruby.scm (ruby-simplecov): New variable.
2015-11-30 14:41:48 +01:00
Ricardo Wurmus
b0cf606f75
gnu: Add sparsehash.
...
* gnu/packages/crypto.scm (sparsehash): New variable.
2015-11-30 14:41:48 +01:00
Ricardo Wurmus
0149354d21
gnu: Add cereal.
...
* gnu/packages/serialization.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
2015-11-30 14:41:48 +01:00
Efraim Flashner
dbd3a91f54
gnu: xorriso: Update to 1.4.2.
...
* gnu/packages/cdrom.scm (xorriso): Update to 1.4.2.
2015-11-30 10:41:19 +02:00
Ludovic Courtès
02f0c3b28e
gnu: python: Move tkinter to "tk" output.
...
* gnu/packages/python.scm (python-2)[outputs]: New field.
[arguments]: Add 'move-tk-inter' phase.
(python2-minimal, python-minimal, wrap-python3)[outputs]: New field.
2015-11-29 22:59:28 +01:00
Ludovic Courtès
d2cc9c7cfd
gnu: python: Clarify and shorten the list of built-time modules.
...
* gnu/packages/python.scm (python-2)[arguments]: Make the #:modules list
shorter.
2015-11-29 22:59:28 +01:00
Ludovic Courtès
5b4e2791ef
gnu: python: Do not record configure flags.
...
This reduces the number of run-time dependencies of python-2 from 25 to
15, corresponding only to ~4 MiB.
* gnu/packages/python.scm (python-2)[arguments]: Add
'do-not-record-configure-flags' phase.
2015-11-29 22:59:28 +01:00
Ludovic Courtès
c5a05e3143
gnu: python: Factorize configure flags with minimal variants.
...
* gnu/packages/python.scm (python2-minimal, python-minimal)[arguments]:
Reuse the inherited configure flags, and just add
--without-system-ffi.
2015-11-29 22:59:28 +01:00
Ludovic Courtès
9820a6d4a0
gnu: python: Make 'sys.version' deterministic.
...
* gnu/packages/patches/python-2-deterministic-build-info.patch,
gnu/packages/patches/python-3-deterministic-build-info.patch: New
files.
* gnu/packages/python.scm (python-2, python): Use them.
* gnu-system.am (dist_patch_DATA): Add them.
2015-11-29 22:59:28 +01:00
Ludovic Courtès
a665996f58
gnu: python: Set SOURCE_DATE_EPOCH to 1 instead of 0.
...
* gnu/packages/python.scm (python-2)[arguments]: Set SOURCE_DATE_EPOCH
to 1 to match what the daemon does.
* guix/build/python-build-system.scm (set-SOURCE-DATE-EPOCH): Likewise.
2015-11-29 22:59:28 +01:00
Ludovic Courtès
dedc832070
gnu: python-2: Honor 'SOURCE_DATE_EPOCH'.
...
* gnu/packages/patches/python-2.7-source-date-epoch.patch: New file.
* gnu/packages/python.scm (python-2)[source]: Use it.
[arguments]: Set SOURCE_DATE_EPOCH in 'patch-lib-shells' phase.
* guix/build/python-build-system.scm (set-SOURCE-DATE-EPOCH): New
procedure.
(%standard-phases): Add it.
* gnu-system.am (dist_patch_DATA): Add patch.
2015-11-29 22:59:28 +01:00
Ludovic Courtès
f8e7fdc416
gnu: tcl: Produce 'tclIndex' files deterministically.
...
* gnu/packages/patches/tcl-mkindex-deterministic.patch: New patch.
* gnu/packages/tcl.scm (tcl)[source]: Use it.
* gnu-system.am (dist_patch_DATA): Add it.
2015-11-29 22:59:28 +01:00
宋文武
79c8a071e7
tk: Hardcode path to TK_LIBRARY.
...
Fixes <http://bugs.gnu.org/20889 >.
* gnu/packages/patches/tk-find-library.patch: New patch.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/tcl.scm (tk)[source]: Add patch.
2015-11-29 22:59:28 +01:00
Ricardo Wurmus
4b7857a48b
gnu: Add perl-dbd-mysql.
...
* gnu/packages/databases.scm (perl-dbd-mysql): New variable.
2015-11-29 20:52:10 +01:00
Ricardo Wurmus
11d4800aa2
gnu: Add Rakarrack.
...
* gnu/packages/audio.scm (rakarrack): New variable.
2015-11-29 20:45:06 +01:00
Ricardo Wurmus
25a21c7ff6
gnu: xfce-session: Enable shutdown/reboot menu entries.
...
* gnu/packages/xfce.scm (xfce-session)[inputs]: Add upower and polkit.
[source]: Replace paths to "shutdown" with "halt" and "restart".
2015-11-29 20:33:35 +01:00
Ludovic Courtès
cb7bd0cff5
gnu: weechat: Dynamically link against libpython2.7.so.
...
* gnu/packages/patches/weechat-python.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/weechat.scm (weechat)[source]: Use it.
2015-11-29 19:17:33 +01:00
Ludovic Courtès
4eae798075
gnu: guile-next: Update to 2.1.1.
...
* gnu/packages/guile.scm (guile-next)[source]: Update to 2.1.1.
[arguments, native-inputs]: Move to...
(guile-for-guile-emacs): ... here. New fields.
2015-11-29 17:37:00 +01:00
Ludovic Courtès
f79a576e77
gnu: jasper: Patch CVE-2008-3522.
...
* gnu/packages/patches/jasper-CVE-2008-3522.patch: New file.
* gnu/packages/image.scm (jasper)[source]: Use it.
* gnu-system.am (dist_patch_DATA): Add it.
2015-11-28 16:29:11 +01:00
Ludovic Courtès
4331f558d7
gnu: tor: Update to 0.2.7.5.
...
* gnu/packages/tor.scm (tor): Update to 0.2.7.5.
2015-11-27 15:06:15 +01:00
Ludovic Courtès
ef8742ea69
gnu: eigen: Really run tests in verbose mode.
...
Suggested by Gaël Guennebaud <gael.guennebaud@inria.fr>.
* gnu/packages/algebra.scm (eigen)[arguments]: Remove #:test-target.
Rename 'build-tests' phase to 'check', and have it run 'ctest -V'.
2015-11-27 11:04:17 +01:00
Andreas Enge
08c28b6d5a
gnu: gp2c: Update to 0.0.9pl4.
...
* gnu/packages/algebra.scm (gp2c): Update to 0.0.9pl4.
2015-11-27 02:44:21 +01:00
Efraim Flashner
b72a44100e
gnu: python-pickleshare: Add python-setuptools to native-inputs.
...
* gnu/packages/python.scm (python-pickleshare)[native-inputs]: Add
python-setuptools.
2015-11-26 15:28:31 +02:00
Efraim Flashner
553b709ba1
gnu: python-pathpy: Add python-setuptools to native-inputs.
...
* gnu/packages/python.scm (python-pathpy)[native-inputs]: Add
python-setuptools.
2015-11-26 15:26:18 +02:00
Efraim Flashner
0066de6f3a
gnu: python2-oauthlib: Override python2-cryptography in inputs.
...
* gnu/packages/python.scm (python2-oauthlib)[inputs]: Override inherited
"python2-cryptography" in inputs.
2015-11-26 12:03:45 +02:00
Efraim Flashner
bde2171d4d
gnu: python-oauthlib: Update to 1.0.3.
...
* gnu/packages/python.scm (python-oauthlib): Update to 1.0.3.
[native-inputs]: Move python-setuptools, python-nose, python mock here.
Add python-coverage.
[inputs]: Add python-blinker, python-cryptography, python-pyjwt.
2015-11-25 20:42:06 +02:00
Efraim Flashner
7957fe6c10
gnu: python2-unittest2: Use python2-setuptools.
...
* gnu/packages/python.scm (python2-unittest2)[inputs]: Switch from
python-setuptools to python2-setuptools.
2015-11-25 20:42:05 +02:00
David Thompson
34f5618bca
gnu: Add kodi.
...
* gnu/packages/kodi.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
2015-11-25 11:44:11 -05:00
David Thompson
b0b23e52a3
gnu: Add jasper.
...
* gnu/packages/image.scm (jasper): New variable.
2015-11-25 11:44:11 -05:00
David Thompson
33ae9107d8
gnu: Add tinyxml.
...
* gnu/packages/xml.scm (tinyxml): New variable.
* gnu/packages/patches/tinyxml-use-stl.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
2015-11-25 11:44:11 -05:00
Leo Famulari
13ef3e997b
gnu: Add eyeD3.
...
* gnu/packages/mp3.scm (eyed3): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2015-11-25 17:01:02 +01:00
Ricardo Wurmus
1c207a7658
gnu: Add Ragel.
...
* gnu/packages/ragel.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
2015-11-25 15:21:47 +01:00
Ludovic Courtès
b6094b1f0a
gnu: dico: Sort entries in .a files deterministically.
...
* gnu/packages/patches/dico-libtool-deterministic.patch: New file.
* gnu/packages/dico.scm (dico)[source]: Use it.
[arguments]: Add #:make-flags.
* gnu-system.am (dist_patch_DATA): Add the patch.
2015-11-25 11:59:54 +01:00
Leo Famulari
39570137e5
gnu: libreoffice: Update to 5.0.3.2 [fixes CVE-2015-5214].
...
* gnu/packages/libreoffice.scm (libreoffice): Update to 5.0.3.2
2015-11-24 22:00:34 -05:00
Ludovic Courtès
c9e34a6a77
gnu: Add GNU Dico.
...
* gnu/packages/dico.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
2015-11-24 23:54:30 +01:00
Efraim Flashner
eb31d4b4f1
gnu: python-pyjwt: Update to 1.4.0.
...
* gnu/packages/python.scm (python-pyjwt): Update to 1.4.0.
[native-inputs]: Move python-setuptools here, add python-pytest-runner.
2015-11-24 22:30:09 +02:00
Efraim Flashner
d50d097d58
gnu: python-pytest-runner: Add python-setuptools as native-input.
...
* gnu/packages/python.scm (python-pytest-runner)[native-input]: Add
python-setuptools.
2015-11-24 21:44:58 +02:00
Efraim Flashner
383af6b096
gnu: python-setuptools-scm: Update to 1.9.0.
...
* gnu/packages/python.scm (python-setuptools-scm): Update to 1.9.0.
[native-inputs]: Add python-setuptools.
2015-11-24 20:08:14 +02:00
Eric Bavier
97003b5ccc
gnu: gnuplot: Update to 5.0.1.
...
* gnu/packages/maths.scm (gnuplot): Update to 5.0.1.
(native-inputs): 'texlive' -> 'texlive-bin'.
2015-11-24 11:41:46 -06:00
Ricardo Wurmus
8b749cf3cb
gnu: ruby-simplecov-html: Fix hash and disable tests.
...
* gnu/packages/ruby.scm (ruby-simplecov-html)[source]: Replace incorrect
hash.
[arguments]: Disable tests.
2015-11-24 16:39:30 +01:00
Taylan Ulrich Bayırlı/Kammer
bbee7bd765
gnu: enca: Add file-name field to source.
...
* gnu/packages/textutils.scm (enca): Add file-name field to source.
2015-11-23 13:46:31 +01:00
Taylan Ulrich Bayırlı/Kammer
6f323b0773
gnu: recode: Add file-name field to source.
...
* gnu/packages/textutils.scm (recode): Add file-name field to source.
2015-11-23 12:05:55 +01:00
Ludovic Courtès
821f4dc287
gnu: Fix a few 'source-file-name' lint warnings.
...
* gnu/packages/firmware.scm (ath9k-htc-firmware)[source](file-name): New
field.
* gnu/packages/gnunet.scm (guile-gnunet)[source](file-name): New field.
* gnu/packages/guile.scm (guile-next)[source](file-name): New field.
(guile-minikanren)[source](file-name): New field
(guile-gdbm-ffi)[source](file-name): New field.
* gnu/packages/ssh.scm (guile-ssh)[source](file-name): New field.
2015-11-23 10:52:32 +01:00
Efraim Flashner
92d9a36e97
gnu: tig: Update to 2.1.1.
...
* gnu/packages/version-control.scm (tig): Update to 2.1.1.
2015-11-21 23:03:11 +02:00
Efraim Flashner
7fbbd3e7a0
gnu: cvs: Use external zlib.
...
* gnu/packages/version-control.scm (cvs)[arguments]: add configure flag
--with-exernal-zlib.
2015-11-21 21:43:11 +02:00
Efraim Flashner
f94f481988
gnu: nano: Update to 2.4.3.
...
* gnu/packages/nano.scm (nano): Update to 2.4.3.
2015-11-21 20:56:08 +02:00
Mathieu Lirzin
1b933e62dc
gnu: parted: Update to 3.2.
...
* gnu/packages/disk.scm (parted): Update to 3.2.
[inputs]: Add lvm2 and remove check. Replace readline-6.2 with its
latest version.
[native-inputs]: Add perl and python for the tests.
[arguments]: Use `modify-phases' and adapt to the new tests.
[home-page]: Use https.
2015-11-21 13:10:27 +01:00
Ludovic Courtès
06da1a6b4f
gnu: Add qemu-minimal.
...
* gnu/packages/qemu.scm (qemu): Exchange with former QEMU-HEADLESS.
(qemu-headless): Rename to...
(qemu-minimal): ... this. New variable. Pass --target-list.
* gnu/packages/debug.scm (qemu-2.3.0): Inherit from QEMU-MINIMAL.
* gnu/packages/grub.scm (qemu-for-tests): Likewise.
* gnu/system/vm.scm (expression->derivation-in-linux-vm, qemu-image):
Update to name change.
2015-11-21 00:36:23 +01:00
Ricardo Wurmus
56215e4154
gnu: Add Synfig Studio.
...
* gnu/packages/animation.scm (synfigstudio): New variable.
2015-11-20 20:23:03 +01:00
Ricardo Wurmus
7775a18690
gnu: Add Synfig.
...
* gnu/packages/animation.scm (synfig): New variable.
* gnu/packages/patches/synfig-build-fix.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
2015-11-20 20:23:03 +01:00
Ricardo Wurmus
c1fbc66a77
gnu: Add ETL.
...
* gnu/packages/animation.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
2015-11-20 20:23:03 +01:00
Ricardo Wurmus
307ad140db
gnu: Add MLT.
...
* gnu/packages/video.scm (mlt): New variable.
2015-11-20 20:23:03 +01:00
Ricardo Wurmus
561965941c
gnu: Add libxml++.
...
* gnu/packages/gnome.scm (libxml++): New variable.
2015-11-20 20:23:03 +01:00
Eric Bavier
9cf5245497
gnu: slepc: Update to 3.6.2.
...
* gnu/packages/maths.scm (slepc): Update to 3.6.2.
[arguments]: Append "/lib" to arpack configure flag. Use 'inputs'
rather than '%build-inputs' in 'configure phase.
2015-11-20 11:58:40 -06:00
Eric Bavier
32187d99bb
gnu: petsc: Update to 3.6.2.
...
* gnu/packages/maths.scm (petsc): Update to 3.6.2.
2015-11-20 11:58:40 -06:00
Eric Bavier
c69fa4380a
gnu: mumps: Update to 5.0.1.
...
* gnu/packages/maths.scm (mumps): Update to 5.0.1.
2015-11-20 11:58:40 -06:00
Eric Bavier
ac356fd6ab
gnu: openmpi: Update to 1.10.1.
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* gnu/packages/mpi.scm (openmpi): Update to 1.10.1.
[arguments]: Remove now-unsupported configure flags. Add
--enable-builtin-atomics. Remove development-oriented
--enable-debug.
2015-11-20 11:58:40 -06:00
Eric Bavier
2f5b6a1f18
gnu: hwloc: Update to 1.11.1.
...
* gnu/packages/mpi.scm (hwloc): Update to 1.11.1.
[source]: Remove patch.
* gnu/packages/patches/hwloc-gather-topology-lstopo.patch: Delete it.
* gnu-system.am (dist_patch_DATA): Remove it.
2015-11-20 11:58:40 -06:00
Ricardo Wurmus
0297966495
gnu: guitarix: Update to 0.34.0.
...
* gnu/packages/audio.scm (guitarix): Update to 0.34.0.
[source]: Remove patch.
[inputs]: Add webkitgtk/gtk+-2.
* gnu/packages/patches/guitarix-c++11: Remove file.
* gnu-system.am (dist_patch_DATA): Remove it.
2015-11-20 18:19:30 +01:00
David Thompson
3307c7877e
gnu: Add emulation-station.
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* gnu/packages/games.scm (emulation-station): New variable.
2015-11-20 09:27:15 -05:00
Ricardo Wurmus
b49c5a58dc
gnu: preseq: Update to 2.0.
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* gnu/packages/bioinformatics.scm (preseq): Update to 2.0.
[source]: Add file-name field, remove patches.
[arguments]: Remove unused build phases, add make flags.
[inputs]: Add smithlab-cpp.
* gnu/packages/patches/preseq-1.0.2-link-with-libbam.patch: Remove file.
* gnu/packages/patches/preseq-1.0.2-install-to-PREFIX.patch: Remove
file.
* gnu-system.am (dist_patch_DATA): Remove them.
2015-11-20 15:22:06 +01:00
Ricardo Wurmus
c6a24d6e92
gnu: Add smithlab-cpp.
...
* gnu/packages/bioinformatics.scm (smithlab-cpp): New variable.
2015-11-20 15:22:06 +01:00
Ricardo Wurmus
3d51ec919e
gnu: edirect: Update home page.
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* gnu/packages/bioinformatics.scm (edirect)[home-page]: Append trailing
slash to home page.
2015-11-20 15:21:24 +01:00
Ricardo Wurmus
c52a382c4a
gnu: sra-tools: Update to 2.5.4.
...
* gnu/packages/bioinformatics.scm (sra-tools): Update to 2.5.4.
2015-11-20 15:21:24 +01:00
Ricardo Wurmus
9e5ef614aa
gnu: ncbi-vdb: Update to 2.5.4.
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* gnu/packages/bioinformatics.scm (ncbi-vdb): Update to 2.5.4.
2015-11-20 15:21:24 +01:00
Ricardo Wurmus
614a8977cb
gnu: ngs-java: Update to 1.2.2.
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* gnu/packages/bioinformatics.scm (ngs-java): Update to 1.2.2.
[arguments]: Remove build phase "fix-java-symlink-installation".
2015-11-20 15:21:24 +01:00
Ricardo Wurmus
d6a1cd7cae
gnu: ngs-sdk: Update to 1.2.2.
...
* gnu/packages/bioinformatics.scm (ngs-sdk): Update to 1.2.2.
2015-11-20 15:21:24 +01:00
Ricardo Wurmus
2c84ba7e11
gnu: Add ruby-net-ssh.
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* gnu/packages/ruby.scm (ruby-net-ssh): New variable.
2015-11-20 15:21:24 +01:00
Ricardo Wurmus
4f2a52aeb5
gnu: Add ruby-mocha.
...
* gnu/packages/ruby.scm (ruby-mocha): New variable.
2015-11-20 15:21:24 +01:00
Ricardo Wurmus
d93062fd5c
gnu: Add ruby-redcarpet.
...
* gnu/packages/ruby.scm (ruby-redcarpet): New variable.
2015-11-20 15:21:24 +01:00
Ricardo Wurmus
97aee8d3eb
gnu: Add ruby-introspection.
...
* gnu/packages/ruby.scm (ruby-introspection): New variable.
2015-11-20 15:21:24 +01:00
Ricardo Wurmus
4016ba3fd0
gnu: Add ruby-instantiator.
...
* gnu/packages/ruby.scm (ruby-instantiator): New variable.
2015-11-20 15:21:24 +01:00
Ricardo Wurmus
21f7b7bd80
gnu: Add ruby-blankslate.
...
* gnu/packages/ruby.scm (ruby-blankslate): New variable.
2015-11-20 15:21:24 +01:00
Ricardo Wurmus
25d6d49b3e
gnu: Add ruby-metaclass.
...
* gnu/packages/ruby.scm (ruby-metaclass): New variable.
2015-11-20 15:21:24 +01:00
Ricardo Wurmus
3383f5bdab
gnu: Add ruby-test-unit.
...
* gnu/packages/ruby.scm (ruby-test-unit): New variable.
2015-11-20 15:21:24 +01:00
Ricardo Wurmus
cc5aeb8c7d
gnu: Add ruby-packnga.
...
* gnu/packages/ruby.scm (ruby-packnga): New variable.
2015-11-20 15:21:24 +01:00
Ricardo Wurmus
c1f52261e2
gnu: Add ruby-gettext.
...
* gnu/packages/ruby.scm (ruby-gettext): New variable.
2015-11-20 15:21:24 +01:00