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Author SHA1 Message Date
Nicolas Goaziou
3bc0c3bee2
gnu: Add rust-darling-core-0.12. 
* gnu/packages/crates-io.scm (rust-darling-core-0.12): New variable.
(rust-darling-core-0.10): Inherit from above.
 2021-06-08 11:04:37 +02:00
Nicolas Goaziou
1477fdf2b0
gnu: rust-syn-1: Update to 1.0.72. 
* gnu/packages/crates-io.scm (rust-syn-1): Update to 1.0.72.
 2021-06-08 11:04:37 +02:00
Nicolas Goaziou
d649c724ae
gnu: rust-proc-macro2-1: Update to 1.0.27. 
* gnu/packages/crates-io.scm (rust-proc-macro2-1): Update to 1.0.27.
 2021-06-08 11:04:36 +02:00
Nicolas Goaziou
3b34218705
gnu: rust-globset-0.4: Update to 0.4.6. 
* gnu/packages/crates-io.scm (rust-globset-0.4): Update to 0.4.6.
 2021-06-08 11:04:36 +02:00
Nicolas Goaziou
9aa1d9e0eb
gnu: rust-walkdir-2: Update to 2.3.2. 
* gnu/packages/crates-io.scm (rust-walkdir-2): Update to 2.3.2.
[arguments]<#:cargo-inputs> Reorder alphabetically.
 2021-06-08 11:04:35 +02:00
nixo
5fe9481d2b
gnu: bsnes: Don't build native binaries. 
* gnu/packages/emulators.scm (bsnes)[arguments]: Add configure-flag to
not build native binaries.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-06-08 11:24:31 +03:00
Efraim Flashner
df3a60d16f
gnu: Add u-boot-sifive-unmatched. 
* gnu/packages/bootloaders.scm (u-boot-sifive-unmatched): New variable.
 2021-06-08 11:06:42 +03:00
Efraim Flashner
024187c049
gnu: u-boot-2021.07: Update to 2021.07-rc4. 
* gnu/packages/bootloaders.scm (u-boot-2021.07): Update to 2021.07-rc4.
 2021-06-08 11:06:37 +03:00
Ludovic Courtès
dfed76e4ab
gnu: pantheon: Use modern 'define-module' syntax. 
The :prefix bit introduced in 9f59a9b4bc
led to a test failure in 'tests/graph.scm'.

* gnu/packages/pantheon.scm: Write #:prefix, not :prefix.
 2021-06-08 09:25:49 +02:00
Efraim Flashner
61bce4d143
gnu: python-mappy: Move to (gnu packages bioinformatics). 
* gnu/packages/python-xyz.scm (python-mappy): Move to ...
* gnu/packages/bioinformatics.scm: ... here.
 2021-06-08 09:50:55 +03:00
Maxim Cournoyer
fa43419a0f
gnu: jami: Update to 20210606.1.e2f9490. 
* gnu/packages/jami.scm (jami): Update to 20210606.1.e2f9490.
(pjproject-jami)[0019-ignore-down-interfaces]: Apply new custom patch.
(jami-qt)[source]: Use %jami-sources, which now includes the Qt client.
[phases]{change-directory}: New phase.
 2021-06-08 00:04:07 -04:00
Maxim Cournoyer
6bd47fc826
gnu: jami: Always include the custom Jami patches with the sources. 
Before this change, there was a Jami origin containing the sources with the
patches, and another one containing the sources but with the patches removed.
Unify the source to always contain the patches, which adds just 1 MiB to the
corresponding tarball and simplifies things.

* gnu/packages/jami.scm (%jami-sources): Make it a simple variable.  Move the
docstring to a comment.  Only remove the tarballs, always keeping the patches
with the sources.  Adjust the comments.
(%sfl-patches): Remove variable.
(jami-apply-dependency-patches): Rename to...
(jami-apply-custom-patches): ... this.  Adjust the input label used to
'jami-sources'.
(pjproject-jami): Replace %sfl-patches by %jami-sources.  Adjust following the
renaming of the jami-apply-custom-patches procedure.
(ffmpeg-jami): Likewise.  Do not make a temporary binding, simply call the
unquoted jami-apply-custom-patches procedure.
 2021-06-08 00:03:59 -04:00
Maxim Cournoyer
d2686be816
gnu: opendht: Update to 2.2.0rc7-1.c8a0b44. 
* gnu/packages/networking.scm (opendht): Update to 2.2.0rc7-1.c8a0b44.
 2021-06-08 00:02:13 -04:00
Leo Famulari
b1372ad8cb
gnu: Add l3afpad. 
* gnu/packages/text-editors.scm (l3afpad): New variable.
 2021-06-07 19:23:39 -04:00
Ricardo Wurmus
4a01e00a13
gnu: pigx-rnaseq: Update to 0.0.17. 
* gnu/packages/bioinformatics.scm (pigx-rnaseq): Update to 0.0.17.
[arguments]: Remove "use-latest-salmon" phase; add "set-timezone" phase.
[inputs]: Replace r-gprofiler with r-gprofiler2; add r-ggpubr and
python-deeptools.
[native-inputs]: Add tzdata.
 2021-06-08 00:53:06 +02:00
Leo Famulari
fc58d9ac66
gnu: ghostwriter: Update to 2.0.1. 
* gnu/packages/text-editors.scm (ghostwriter): Update to 2.0.1.
 2021-06-07 18:20:07 -04:00
Nicolas Goaziou
69f56c2767
gnu: python-pikepdf: Update to 2.12.2. 
* gnu/packages/python-xyz.scm (python-pikepdf): Update to 2.12.2.
 2021-06-07 23:29:52 +02:00
Jack Hill
732da2201e
gnu: dino: Update to 0.2.1 [fixes CVE-2021-33896]. 
* gnu/packages/messaging.scm (dino): Update to 0.2.1.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2021-06-07 16:51:38 -04:00
Sergey Trofimov
68dcdf6ea7
gnu: qtwebengine: Enable H.264 WebRTC encoding. 
* gnu/packages/qt.scm (qtwebengine)[inputs]: Add openh264.
[source]: Remove bundled openh264.
[arguments]: Adjust build scripts accordingly in the 'substitute-source' phase.
Pass '-webengine-proprietary-codecs' in the custom 'configure' phase.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2021-06-07 16:51:35 -04:00
Xinglu Chen
920dd34a34
gnu: youtube-dl: Update to 2021.06.06. 
* gnu/packages/video.scm (youtube-dl): Update to 2021.06.06.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
 2021-06-07 21:52:37 +02:00
Xinglu Chen
245a65bbe1
gnu: isync: Update to 1.4.2. 
* gnu/packages/mail.scm (isync): Update to 1.4.2.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
 2021-06-07 21:52:31 +02:00
Ricardo Wurmus
be067c908c
gnu: pigx-rnaseq: Adjust to upgrade of salmon. 
* gnu/packages/bioinformatics.scm (pigx-rnaseq)[arguments]: Add phase
"use-latest-salmon".
 2021-06-07 16:50:33 +02:00
Ricardo Wurmus
bb38287570
gnu: salmon: Update to 1.4.0. 
* gnu/packages/bioinformatics.scm (salmon): Update to 1.4.0.
[arguments]: Remove unnecessary flags, add other soon-to-be-unnecessary flags;
remove "prepare-rapmap" phase, add "prepare-pufferfish" phase, add
"fix-error-message-in-tests" phase, simplify "use-system-libraries" phase.
[inputs]: Add curl and pufferfish sources; remove libdivsufsort and rapmap
sources.
 2021-06-07 16:50:33 +02:00
Ricardo Wurmus
483cdf36a5
gnu: cereal: Update to 1.3.0. 
* gnu/packages/serialization.scm (cereal): Update to 1.3.0.
 2021-06-07 16:50:33 +02:00
Ricardo Wurmus
9875dae429
gnu: macs: Update to 2.2.7.1. 
* gnu/packages/bioinformatics.scm (macs): Update to 2.2.7.1.
 2021-06-07 16:50:33 +02:00
Ricardo Wurmus
1ace395f9c
gnu: libgff: Update to 2.0.0. 
* gnu/packages/bioinformatics.scm (libgff): Update to 2.0.0.
[home-page]: Update to new home.
 2021-06-07 16:50:33 +02:00
Ricardo Wurmus
176513f5f3
gnu: jellyfish: Update to 2.3.0. 
* gnu/packages/bioinformatics.scm (jellyfish): Update to 2.3.0.
[arguments]: Disable SSE to avoid tuning to the build node's CPU.
[native-inputs]: Replace python-2 with python-wrapper.
[license]: Update.
 2021-06-07 16:50:33 +02:00
Pierre Neidhardt
e3611cc412
gnu: sbcl-fof: Update to 0.2.0. 
* gnu/packages/lisp-xyz.scm (sbcl-fof): Update to 0.2.0.
 2021-06-07 14:00:18 +02:00
Christopher Baines
e536fc1786
gnu: guix-build-coordinator: Update to 0-31.4a47417. 
* gnu/packages/package-management.scm (guix-build-coordinator): Update to
0-31.4a47417.
 2021-06-07 10:35:42 +01:00
Ricardo Wurmus
1ac8f05103
gnu: multiqc: Update to 1.10.1. 
* gnu/packages/bioinformatics.scm (multiqc): Update to 1.10.1.
[arguments]: Remove build phase "relax-requirements"; replace "check" phase.
[propagated-inputs]: Add python-coloredlogs, python-future, python-networkx,
and python-rich; remove python-nose.
[native-inputs]: Add python-pytest and the test suite.
 2021-06-07 10:53:16 +02:00
Ricardo Wurmus
856de4f61c
gnu: Add python-rich. 
* gnu/packages/python-xyz.scm (python-rich): New variable.
 2021-06-07 10:53:16 +02:00
Ricardo Wurmus
17f3194150
gnu: python-dataclasses: Update to 0.8. 
* gnu/packages/python-xyz.scm (python-dataclasses): Update to 0.8.
 2021-06-07 10:53:16 +02:00
Ricardo Wurmus
f41e56dcf1
gnu: python-attrs: Update to 21.2.0. 
* gnu/packages/python-xyz.scm (python-attrs): Update to 21.2.0.
(python-attrs-bootstrap): Keep this at 19.3.0 to avoid mass rebuilds.
 2021-06-07 10:53:16 +02:00
Ricardo Wurmus
12964df69a
gnu: python-attrs: Conditionally execute tests. 
* gnu/packages/python-xyz.scm (python-attrs)[arguments]: Wrap "check" phase in
conditional expression.
 2021-06-07 10:53:16 +02:00
Mădălin Ionel Patrașcu
a8c653f0fc
gnu: python-hic2cool: Update to 0.8.3. 
* gnu/packages/bioinformatics.scm (python-hic2cool): Update to 0.8.3.
[source]: Download using git-fetch.
[arguments]: Enable tests. Add phase to make test data writable.
[propagated-inputs]: Add python-h5py, python-numpy, python-pandas,
python-scipy.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-06-07 10:38:54 +03:00
Vinicius Monego
e05100aafd
gnu: gtg: Update to 0.5. 
* gnu/packages/gnome.scm (gtg): Update to 0.5.
[inputs]: Add gdk-pixbuf+svg, pango, python-lxml.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-06-07 10:38:54 +03:00
Vinicius Monego
1acc0cfbb9
gnu: srain: Update to 1.2.2. 
* gnu/packages/irc.scm (srain): Update to 1.2.2.
[build-system]: Switch to meson-build-system.
[arguments]: Add #:glib-or-gtk?. Remove 'fix-permissions phase.
[native-inputs]: Add python-sphinx.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-06-07 10:38:54 +03:00
Matthew James Kraai
d0b3af53e0
gnu: xf86-video-vesa: Update to 2.5.0. 
* gnu/packages/xorg.scm (xf86-video-vesa): Update to 2.5.0.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-06-07 10:38:54 +03:00
Lars-Dominik Braun
dbe607925a
gnu: xpra: Update to 4.2. 
Fixes <https://issues.guix.gnu.org/issue/48890>.

* gnu/packages/xorg.scm (xpra): Update to 4.2.
[source]: Switch to ".tar.gz" archive and update patch file.
[native-inputs]: Add pandoc.
[arguments]: Adjust custom 'fix-paths phase for changes in source.
* gnu/packages/patches/xpra-4.2-systemd-run.patch: Adapt to new version
and rename file.
* gnu/local.mk (dist_patch_DATA): Rename file.

Signed-off-by: Lars-Dominik Braun <lars@6xq.net>
 2021-06-07 09:33:57 +02:00
Ludovic Courtès
4604d43c0e
gnu: gnutls@3.6.16: Fix cross-compilation. 
Fixes <https://bugs.gnu.org/48771>.
Reported by Eric Brown <ecbrown@ericcbrown.com>.

* gnu/packages/tls.scm (gnutls-3.6.16)[arguments]: New field.
 2021-06-06 23:12:18 +02:00
Vinicius Monego
c335fbf3cb
gnu: libheif: Update to 1.12.0. 
* gnu/packages/image.scm (libheif): Update to 1.12.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-06-06 23:12:18 +02:00
Vinicius Monego
13d8443acf
gnu: homebank: Update to 5.5.2. 
* gnu/packages/finance.scm (homebank): Update to 5.5.2.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-06-06 23:12:18 +02:00
Vinicius Monego
436dcb4ffa
gnu: cozy: Update to 1.0.3. 
* gnu/packages/ebook.scm (cozy): Update to 1.0.3.
[inputs]: Add granite, libgee.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-06-06 23:12:18 +02:00
Vinicius Monego
a3082797b3
gnu: drawing: Update to 0.8.0. 
* gnu/packages/gnome.scm (drawing): Update to 0.8.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-06-06 23:12:18 +02:00
c4droid
018e09d4c8
gnu: Add pwntools. 
* gnu/packages/cybersecurity.scm (pwntools): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-06-06 23:12:17 +02:00
Leo Prikler
bde4fc00c0
gnu: komikku: Update to 0.29.1. 
* gnu/packages/gnome.scm (komikku): Update to 0.29.1.
 2021-06-06 21:56:35 +02:00
Tobias Geerinckx-Rice
d102e9a139
gnu: dash: Update to 0.5.11.4. 
* gnu/packages/shells.scm (dash): Update to 0.5.11.4.
 2021-06-06 20:51:21 +02:00
Tobias Geerinckx-Rice
5c38e5e24e
gnu: pidgin: Update to 2.14.5. 
* gnu/packages/messaging.scm (pidgin): Update to 2.14.5.
 2021-06-06 20:51:20 +02:00
Solene Rapenne via Guix-patches via
e2ad110f4c
gnu: vlc: Update to 3.0.14. 
* gnu/packages/video.scm (vlc): Update to 3.0.14.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
 2021-06-06 18:34:12 +02:00
Tobias Geerinckx-Rice
d00713d49e
gnu: git: Update to 2.32.0. 
* gnu/packages/version-control.scm (git): Update to 2.32.0.
 2021-06-06 18:34:12 +02:00
Denis 'GNUtoo' Carikli
3c401ca6df
gnu: Add matterbridge. 
* gnu/packages/messaging.scm (matterbridge): New variable.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
 2021-06-06 18:29:36 +02:00
Hartmut Goebel
5d4bd2ee94
gnu: Add python-pytest-mp. 
* gnu/packages/python-check.scm (python-pytest-mp): New variable.
 2021-06-06 17:50:33 +02:00
Hartmut Goebel
d8fed768a8
gnu: Add python-asn1tools. 
* gnu/packages/python-xyz.scm (python-asn1tools): New variable.
 2021-06-06 17:50:33 +02:00
pukkamustard
52dc188e12
gnu: Add ocaml-ppx-cold. 
* gnu/packages/ocaml.scm (ocaml-ppx-cold): New variable.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2021-06-06 17:17:22 +02:00
pukkamustard
7cf518ee85
gnu: Add ocaml-ppx-here. 
* gnu/packages/ocaml.scm (ocaml-ppx-here): New variable.
  (ocaml4.07-ppx-here): Inherit from ocaml-ppx-here.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2021-06-06 17:16:58 +02:00
pukkamustard
c35fd0374d
gnu: Add ocaml-ppx-compare. 
* gnu/packages/ocaml.scm (ocaml-ppx-compare): New variable.
  (ocaml4.07-ppx-compare): Inherit from ocaml-ppx-compare.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2021-06-06 17:16:56 +02:00
pukkamustard
5b61a1472b
gnu: Add ocaml-syntax-shims. 
* gnu/packages/ocaml.scm (ocaml-syntax-shims): New variable.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2021-06-06 17:16:52 +02:00
pukkamustard
3649c56a5f
gnu: Add ocaml-ppx-let. 
* gnu/packages/ocaml.scm (ocaml-ppx-let): New variable.
  (ocaml4.07-ppx-let): Inherit from ocaml-ppx-let.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2021-06-06 17:16:50 +02:00
pukkamustard
6f4f9c4d55
gnu: Add ocaml-bigstringaf. 
* gnu/ocaml/packages.scm (ocaml-bigstringaf): New variable.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2021-06-06 17:16:48 +02:00
pukkamustard
c729d98610
gnu: Add ocaml-ppx-sexp-conv. 
* gnu/packages/ocaml.scm (ocaml-ppx-sexp-conv): New variable.
  (ocaml4.07-ppx-sexp-conv): Inherit from ocaml-ppx-sexp-conv.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2021-06-06 17:16:45 +02:00
pukkamustard
ec31363e22
gnu: Add ocaml-uunf. 
* gnu/packages/ocaml.scm (ocaml-uunf): New variable.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2021-06-06 17:16:43 +02:00
pukkamustard
59a39ec61b
gnu: Add ocaml-sedlex. 
* gnu/packages/ocaml.scm (ocaml-sedlex): New variable.
  (ocaml4.07-sedlex): Inherit from ocaml-sedlex.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2021-06-06 17:16:41 +02:00
pukkamustard
262683250c
gnu: Add ocaml-ppxlib. 
* gnu/packages/ocaml.scm (ocaml-ppxlib): New variable.
  (ocaml4.07-ppxlib): Inherit from ocaml-ppxlib.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2021-06-06 17:16:39 +02:00
pukkamustard
3c8899160b
gnu: ocaml-migrate-parsetree: Update to 2.1.0. 
* gnu/packages/ocaml.scm (ocaml-migrate-parsetree): Update to 2.1.0.
  (ocaml-migrate-parsetree-1): New variable.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2021-06-06 17:16:37 +02:00
pukkamustard
cfa65d7770
gnu: Add ocaml-compiler-libs. 
* gnu/packages/ocaml.scm (ocaml-compiler-libs): New variable.
  (ocaml4.07-compiler-libs): Inherit from ocaml-compiler-libs.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2021-06-06 17:16:35 +02:00
pukkamustard
8f5aa879de
gnu: Add ocaml-stdio. 
* gnu/packages/ocaml.scm (ocaml-stdio): New variable.
  (ocaml4.07-stdio): Inherit from ocaml-stdio.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2021-06-06 17:16:33 +02:00
pukkamustard
4b6e1fba5a
gnu: Add ocaml-gen. 
* gnu/packages/ocaml.scm (ocaml-gen): New variable.
  (ocaml4.07-gen): Remove variable.
  (ocaml4.07-sedlex): Replace ocaml4.07-gen with ocaml-gen.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2021-06-06 17:16:31 +02:00
pukkamustard
99ed037081
gnu: ocaml4.07-gen: Update to 0.5.3. 
* gnu/packages/ocaml.scm (ocaml4.07-gen): Update to 4.07.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2021-06-06 17:16:29 +02:00
pukkamustard
b3bc7489c6
gnu: ocaml-lwt: Update to 5.4.0. 
* gnu/packages/ocaml.scm (ocaml-lwt): Update to 5.4.0.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2021-06-06 17:16:27 +02:00
pukkamustard
0f5f8d48f8
gnu: ocaml-lwt: Make libev a propagated input. 
* gnu/packages/ocaml.scm (ocaml-lwt) [propagated-inputs]: Add libev.
  [inputs]: Remove libev.
  (ocaml-ouint2, ocaml4.07-lambda-term, ocaml-markup) [inputs]: Remove libev.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2021-06-06 17:16:25 +02:00
pukkamustard
5a4acc5331
gnu: ocaml-ctypes: Make ocaml-integers a propagated input. 
* gnu/packages/ocaml.scm (ocaml-ctypes)[propagated-inputs]: Add ocaml-integers.
  [inputs]: Remove ocaml-integers.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2021-06-06 17:16:22 +02:00
pukkamustard
0f62ea0774
gnu: ocaml-ctypes: Update to 0.18.0. 
* gnu/packages/ocaml.scm (ocaml-ctypes): Update to 0.18.0.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2021-06-06 17:16:20 +02:00
pukkamustard
b477a9f42e
gnu: ocaml-integers: Update to 0.4.0. 
* gnu/packages/ocaml.scm (ocaml-integers): Update to 0.4.0.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2021-06-06 17:15:58 +02:00
Matthew James Kraai
b2122b07dc
gnu: xf86-input-libinput: Update to 1.0.1. 
* gnu/packages/xorg.scm (xf86-input-libinput): Update to 1.0.1.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
 2021-06-06 16:19:53 +02:00
Tobias Geerinckx-Rice
db6ff6da15
gnu: xf86-input-libinput: Fix licence information. 
* gnu/packages/xorg.scm (xf86-input-libinput)[license]: This package is
almost exclusively expat, with a single x11 file that's not installed.
 2021-06-06 16:19:52 +02:00
Matthew James Kraai
b6affc5c04
gnu: xterm: Update to 367. 
* gnu/packages/xorg.scm (xterm): Update to 367.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
 2021-06-06 15:50:24 +02:00
Domagoj Stolfa
77056478a2
gnu: strongswan: Configure more sensible defaults. 
* gnu/packages/networking.scm (strongswan)[arguments]<#:configure-flags>:
Enable aesni, attr-sql, chapoly, curl, dhcp, eap-aka, eap-aka-3gpp,
eap-dynamic, eap-identity, eap-md5, eap-mschapv2, eap-peap, eap-radius,
eap-sim, eap-sim-file, eap-simaka-pseudonym, eap-simaka-reauth,
eap-simaka-sql, eap-tls, eap-tnc, eap-ttls, ext-auth, farp, ha, led, md4,
mediation, openssl, soup, sql, sqlite, xauth-eap, xauth-noauth, and
xauth-pam support.
Disable ldap, mysql, and systemd support.
Use libcap by default.
[inputs]: Add libcap, libsoup, and linux-pam.
[native-inputs]: Add pkg-config.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
 2021-06-06 15:35:47 +02:00
Solene Rapenne
ed057e33a5
gnu: tig: Update to 2.5.4. 
* gnu/packages/version-control.scm (tig): Update to 2.5.4.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2021-06-06 18:11:50 +08:00
Jonathan Brielmaier
db8ea15ba0
gnu: icedove-wayland: Refactor as a wrapper around icedove. 
This saves us a full build of icedove-wayland analogue to
chromium-wayland.

* gnu/packages/gnuzilla.scm (icedove-wayland)[inputs]: Add bash and
icedove.
[arguments]: Copy the binary over and wrap it for Wayland. As well as
the desktop-file and the license file.
 2021-06-06 11:26:20 +02:00
Efraim Flashner
b65c02e2d3
gnu: freebayes: Update to 1.3.5. 
* gnu/packages/bioinformatics.scm (freebayes): Update to 1.3.5.
[source]: Remove patch.
[arguments]: Adjust custom 'patch-source phase for changes in source.
[inputs]: Remove zlib.
* gnu/packages/patches/freebayes-devendor-deps.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2021-06-06 12:13:28 +03:00
Efraim Flashner
1fd8819fac
gnu: poke: Update to 1.3. 
* gnu/packages/engineering.scm (poke): Update to 1.3.
 2021-06-06 10:53:55 +03:00
Guillaume Le Vaillant
da28abcfb0
gnu: sdrangel: Add SoapySDR support. 
* gnu/packages/radio.scm (sdrangel)[inputs]: Add soapysdr.
  [arguments]: Update 'configure-flags'.
 2021-06-06 09:46:04 +02:00
Nicolas Goaziou
04beee1632
gnu: emacs-company-irony: Update to 1.1.1. 
* gnu/packages/emacs-xyz.scm (emacs-company-irony): Update to 1.1.1.
[inputs]: Re-order alphabetically.
[descrption]: Properly capitalize.
 2021-06-06 09:06:40 +02:00
Nicolas Goaziou
36fd42ded2
gnu: emacs-elfeed-score: Update to 0.7.9. 
* gnu/packages/emacs-xyz.scm (emacs-elfeed-score): Update to 0.7.9.
 2021-06-06 09:03:24 +02:00
Maxim Cournoyer
7fd2c9a00e
gnu: msgpack: Update to 3.3.0. 
* gnu/packages/serialization.scm (msgpack): Update to 3.3.0.
 2021-06-06 02:38:29 -04:00
Maxim Cournoyer
876f4071ab
gnu: libvpx: Update to 1.10.0. 
* gnu/packages/video.scm (libvpx): Update to 1.10.0.
 2021-06-06 02:38:29 -04:00
Maxim Cournoyer
544a980f3a
gnu: czmq: Re-enable previously failing tests, fixed in 4.2.1. 
* gnu/packages/networking.scm (czmq)[phases]: Delete argument.
 2021-06-06 02:38:29 -04:00
Maxim Cournoyer
a18079288f
gnu: ppsspp: Update to 1.11.3-1.69fa207. 
This fixes the build with ffmpeg 4.4.

* gnu/packages/patches/ppsspp-disable-upgrade-and-gold.patch: Rebase patch.
* gnu/packages/emulators.scm (ppsspp): Update to 1.11.3-1.69fa207.
[source]: Adjust origin snippet to unbundle the newly added zstd library.
 2021-06-06 02:38:29 -04:00
Maxim Cournoyer
6a0d0c3c47
gnu: libopenshot: Use ffmpeg-4.3. 
* gnu/packages/video.scm (libopenshot)
[propagated-inputs]{ffmpeg}: Downgrade to ffmpeg 4.3 to fix build.
 2021-06-06 02:38:29 -04:00
Maxim Cournoyer
30eccefa39
gnu: Add ffmpeg-4.3. 
* gnu/packages/video.scm (ffmpeg-4.3): New variable.
 2021-06-06 02:38:28 -04:00
Maxim Cournoyer
4d0030eec5
gnu: diffoscope: Update to 177. 
This resolves a problem with ffmpeg 4.4.

* gnu/packages/diffoscope.scm (diffoscope): Update to 177.
 2021-06-06 02:38:28 -04:00
Maxim Cournoyer
f02b9d6d2c
gnu: ffmpeg: Update to 4.4. 
* gnu/packages/video.scm (ffmpeg): Update to 4.4.
 2021-06-06 02:38:28 -04:00
Maxim Cournoyer
d8c06d8789
gnu: Remove rust-rav1e. 
This package is superseded by rav1e.

Note: I tried defining an alias like so:

  (define-public rust-rav1e
    (deprecated-package "rust-rav1e" rav1e))

But it caused a problem where the 'rav1e' variable would appear unbound.

* gnu/packages/crates-graphics.scm (rust-rav1e-0.4): Remove.
 2021-06-06 02:38:28 -04:00
Maxim Cournoyer
1c5781bc0d
gnu: rust-ravif: Use rav1e instead of rust-rav1e. 
With the rav1e package having been brought up to par with rust-rav1e,
rust-ravif can use rav1e directly.

* gnu/packages/crates-graphics.scm (rust-ravif)
[cargo-inputs]{rust-rav1e}: Replace with...
{rav1e}: ... this.
[cargo-development-inputs]: New argument.
[native-inputs]: New field.
 2021-06-06 02:38:28 -04:00
Maxim Cournoyer
ba047d8bc2
gnu: Add rust-avif-parse-0.13. 
* gnu/packages/crates-graphics.scm (rust-avif-parse-0.13): New variable.
 2021-06-06 02:38:28 -04:00
Maxim Cournoyer
93baaf55cc
gnu: Add rust-bitreader-0.3. 
* gnu/packages/crates-io.scm (rust-bitreader-0.3): New variable.
 2021-06-06 02:38:27 -04:00
Maxim Cournoyer
916bbf53a9
gnu: Add rust-fallible-collections-0.4. 
* gnu/packages/crates-io.scm (rust-fallible-collections-0.4): New variable.
 2021-06-06 02:38:27 -04:00
Maxim Cournoyer
636e478bac
gnu: rav1e: Update to 0.4.1. 
* gnu/packages/video.scm (rav1e): Update to 0.4.1.
[source]: Fix indentation.
[cargo-inputs]{rust-arbitrary}: Update to 0.4.
{rust-av-metrics}: New input.
{rust-bitstream-io}: Update to 1.
{rust-cfg-if}: Update to 1.
{rust-console}: Update to 0.14.
{rust-crossbeam}: New input.
{rust-itertools}: Update to 0.10.
{rust-libfuzzer-sys}: New input.
{rust-noop-proc-macro}: Update to 0.3.
{rust-paste}: Update to 1.
{rust-rand}: Update to 0.8.
{rust-rand-chacha}: Update to 0.3.
{rust-regex}: New input.
{rust-rustc-version}: Update to 0.3.
{rust-signal-hook}: Update to 0.3.
{rust-v-frame, rust-wasm-bindgen}: New inputs.
{rust-cc: Move to...
[cargo-development-inputs]: ... here.
{rust-rand}: Update to 0.8.
{rust-rand-chacha}: Update to 0.3.
{rust-semver}: Update to 0.11.
[inputs]{nasm}: Move to...
[native-inputs]: ... here.  This was spotted by 'guix lint'.
[synopsis]: Focus on facts, toning down marketing.
[description]: Expound.
 2021-06-06 02:38:27 -04:00
Maxim Cournoyer
62b1c4718c
gnu: rust-cargo-c: Update to 0.8.1+cargo-0.53. 
* gnu/packages/rust-apps.scm (rust-cargo-c): Update to 0.8.1+cargo-0.53.
[cargo-inputs]{rust-cbindgen}: Update to 0.19.
{rust-semver}: Update to 0.10.
{rust-serde-json}: Update to 1.
{rust-cargo, rust-anyhow}: New inputs.
[native-inputs]: New field.
[inputs]: New field.
 2021-06-06 02:38:27 -04:00
Maxim Cournoyer
b95e43b4fd
gnu: rust-serde-json-1: Update to 1.0.64. 
* gnu/packages/crates-io.scm (rust-serde-json-1): Update to 1.0.64.
 2021-06-06 02:38:27 -04:00
Maxim Cournoyer
9fed4419bc
gnu: Add rust-cargo-0.53. 
* gnu/packages/crates-io.scm (rust-cargo-0.53): New variable.
 2021-06-06 02:38:27 -04:00
Maxim Cournoyer
0ededfaaad
gnu: Add rust-commoncrypto-0.2. 
* gnu/packages/crates-io.scm (rust-commoncrypto-0.2): New variable.
 2021-06-06 02:38:27 -04:00
Maxim Cournoyer
aacc47eb4c
gnu: Add rust-commoncrypto-sys-0.2. 
* gnu/packages/crates-io.scm (rust-commoncrypto-sys-0.2): New variable.
 2021-06-06 02:38:26 -04:00
Maxim Cournoyer
25c4ad2771
gnu: Add rust-bytesize-1. 
* gnu/packages/crates-io.scm (rust-bytesize-1): New variable.
 2021-06-06 02:38:26 -04:00
Maxim Cournoyer
c5f0ce2244
gnu: Add rust-cargo-platform-0.1. 
* gnu/packages/crates-io.scm (rust-cargo-platform-0.1): New variable.
 2021-06-06 02:38:26 -04:00
Maxim Cournoyer
b5a68bde6a
gnu: Add rust-crates-io-0.33. 
* gnu/packages/crates-io.scm (rust-crates-io-0.33): New variable.
 2021-06-06 02:38:26 -04:00
Maxim Cournoyer
bc11792923
gnu: Add rust-crypto-hash-0.3. 
* gnu/packages/crates-io.scm (rust-crypto-hash-0.3): New variable.
 2021-06-06 02:38:26 -04:00
Maxim Cournoyer
2e79f847fd
gnu: rust-filetime-0.2: Update to 0.2.14. 
* gnu/packages/crates-io.scm (rust-filetime-0.2): Update to 0.2.14.
[cargo-inputs]{rust-cargo-if}: Update to version 1.
{rust-redox-syscall}: Update to version 0.2.
 2021-06-06 02:38:26 -04:00
Maxim Cournoyer
4acd1213a3
gnu: Add rust-fwdansi-1. 
* gnu/packages/crates-io.scm (rust-fwdansi-1): New variable.
 2021-06-06 02:38:25 -04:00
Maxim Cournoyer
0fbaf75b1a
gnu: rust-git2-0.13: Update to 0.13.20. 
* gnu/packages/crates-io.scm (rust-git2-0.13): Update to 0.13.20.
[cargo-development-inputs]{rust-paste}: Update to version 1.
 2021-06-06 02:38:25 -04:00
Maxim Cournoyer
8550b41744
gnu: rust-libgit2-sys-0.7: Remove unused package. 
* gnu/packages/crates-io.scm (rust-libgit2-sys-0.7): Delete variable.
 2021-06-06 02:38:25 -04:00
Maxim Cournoyer
b0c53f5c28
gnu: rust-libgit2-sys-0.12: Update to 0.12.21+1.1.0. 
* gnu/packages/crates-io.scm (rust-libgit2-sys-0.12): Update to 0.12.21+1.1.0.
 2021-06-06 02:38:25 -04:00
Maxim Cournoyer
bb162c120a
gnu: Add rust-git2-curl-0.14. 
* gnu/packages/crates-io.scm (rust-git2-curl-0.14): New variable.
 2021-06-06 02:38:25 -04:00
Maxim Cournoyer
b96fd1a4a2
gnu: Add rust-home-0.5. 
* gnu/packages/crates-io.scm (rust-home-0.5): New variable.
 2021-06-06 02:38:25 -04:00
Maxim Cournoyer
93f2fde4c5
gnu: Add rust-im-rc-15. 
* gnu/packages/crates-io.scm (rust-im-rc-15): New variable.
 2021-06-06 02:38:25 -04:00
Maxim Cournoyer
a38cb9c70e
gnu: Add rust-metrohash-1. 
* gnu/packages/crates-io.scm (rust-metrohash-1): New variable.
 2021-06-06 02:38:24 -04:00
Maxim Cournoyer
3cc41bcade
gnu: Add rust-twox-hash-1. 
* gnu/packages/crates-io.scm (rust-twox-hash-1): New variable.
 2021-06-06 02:38:24 -04:00
Maxim Cournoyer
3de4953eac
gnu: rust-digest-0.8: Fix the version of its rust-generic-array input. 
* gnu/packages/crates-io.scm (rust-digest-0.8)
[cargo-inputs]: Adjust the version of the rust-generic-array to 0.12.
 2021-06-06 02:38:24 -04:00
Maxim Cournoyer
2394bd78fa
gnu: Add rust-sized-chunks-0.6. 
* gnu/packages/crates-io.scm (rust-sized-chunks-0.6): New variable.
 2021-06-06 02:38:24 -04:00
Maxim Cournoyer
269e63865c
gnu: Add rust-refpool-0.4. 
* gnu/packages/crates-io.scm (rust-refpool-0.4): New variable.
 2021-06-06 02:38:24 -04:00
Maxim Cournoyer
94b41147c2
gnu: Add rust-bitmaps-2. 
* gnu/packages/crates-io.scm (rust-bitmaps-2): New variable.
 2021-06-06 02:38:24 -04:00
Maxim Cournoyer
b36299c7f4
gnu: Add rust-array-ops-0.1. 
* gnu/packages/crates-io.scm (rust-array-ops-0.1): New variable.
 2021-06-06 02:38:23 -04:00
Maxim Cournoyer
014d0ee878
gnu: rust-jobserver-0.1: Update to 0.1.22. 
* gnu/packages/crates-io.scm (rust-jobserver-0.1): Update to 0.1.22.
 2021-06-06 02:38:23 -04:00
Maxim Cournoyer
6661e83a23
gnu: Add rust-arbitrary-1. 
* gnu/packages/crates-io.scm (rust-arbitrary-1): New variable.
(rust-arbitrary-0.4): Inherit from rust-arbitrary-1.
 2021-06-06 02:38:23 -04:00
Maxim Cournoyer
e6c5d08479
gnu: Add rust-derive-arbitrary-1. 
* gnu/packages/crates-io.scm (rust-derive-arbitrary-1): New variable.
(rust-derive-arbitrary-0.4): Inherit from the above.
 2021-06-06 02:38:23 -04:00
Maxim Cournoyer
41e6f47071
gnu: Add rust-opener-0.4. 
* gnu/packages/crates-io.scm (rust-opener-0.4): New variable.
 2021-06-06 02:38:23 -04:00
Maxim Cournoyer
1c47e771a5
gnu: Add rust-rustc-workspace-hack-1. 
* gnu/packages/crates-io.scm (rust-rustc-workspace-hack-1): New variable.
 2021-06-06 02:38:23 -04:00
Maxim Cournoyer
7ea0a2ec97
gnu: Add rust-serde-ignored-0.1. 
* gnu/packages/crates-io.scm (rust-serde-ignored-0.1): New variable.
 2021-06-06 02:38:22 -04:00
Maxim Cournoyer
be59ed491a
gnu: Add rust-rustfix-0.5. 
* gnu/packages/crates-io.scm (rust-rustfix-0.5): New variable.
(rust-rustfix-0.4): Inherit from the above.
 2021-06-06 02:38:22 -04:00
Maxim Cournoyer
3a9923d4b8
gnu: rust-v-frame-0.2: Update to 0.2.1. 
* gnu/packages/crates-io.scm (rust-v-frame-0.2): Update to 0.2.1.
[synopsis]: Fix capitalization lint warning.
[description]: Re-indent.
 2021-06-06 02:38:22 -04:00
Mădălin Ionel Patrașcu
d1e7b50dbf
gnu: python-cooler: Update to 0.8.11. 
* gnu/packages/bioinformatics.scm (python-cooler): Update to 0.8.11.
[arguments]: Add build phase "patch-tests"; replace "check" phase.
[native-inputs]: Add python-codecov, python-pytest-cov, and
python-pytest-flake8.
[propagated-inputs]: Add python-six and python-sparse.
 2021-06-06 08:33:21 +02:00
Mădălin Ionel Patrașcu
78469645fd
gnu: Add python-sparse. 
* gnu/packages/python-xyz.scm(python-sparse): New variable.
 2021-06-06 08:33:21 +02:00
Guillaume Le Vaillant
9caf7112ee
gnu: gr-osmosdr: Add SoapySDR support. 
* gnu/packages/radio.scm (gr-osmosdr)[inputs]: Add soapysdr.
 2021-06-06 00:25:49 +02:00
Guillaume Le Vaillant
60cd50af43
gnu: rtl-433: Add SoapySDR support. 
* gnu/packages/radio.scm (rtl-433)[inputs]: Add soapysdr.
 2021-06-06 00:25:49 +02:00
Guillaume Le Vaillant
7a5d3976a2
gnu: welle-io: Add SoapySDR support. 
* gnu/packages/radio.scm (welle-io)[inputs]: Add soapysdr.
  [arguments]: Update 'configure-flags'.
 2021-06-06 00:25:49 +02:00
Guillaume Le Vaillant
0855fd3de5
gnu: Add soapyairspyhf. 
* gnu/packages/radio.scm (soapyairspyhf): New variable.
 2021-06-06 00:25:49 +02:00
Guillaume Le Vaillant
ee586c9437
gnu: Add soapyrtlsdr. 
* gnu/packages/radio.scm (soapyrtlsdr): New variable.
 2021-06-06 00:25:49 +02:00
Guillaume Le Vaillant
59ce827618
gnu: Add soapyhackrf. 
* gnu/packages/radio.scm (soapyhackrf): New variable.
 2021-06-06 00:25:49 +02:00
Guillaume Le Vaillant
524c64152a
gnu: Add soapysdr. 
* gnu/packages/radio.scm (soapysdr): New variable.
 2021-06-06 00:25:49 +02:00
Dion Mendel
08b55f1443
gnu: Add libdqlite. 
* gnu/packages/cluster.scm (libdqlite): New Variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-06-05 23:39:29 +02:00
Dion Mendel
404f6145ee
gnu: Add lxcfs. 
* gnu/packages/virtualization.scm (lxcfs): New Variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-06-05 23:39:29 +02:00
Brendan Tildesley
23ab8d417e
gnu: gparted: Update to 1.3.0. 
* gnu/packages/disk.scm (gparted): Update to 1.3.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-06-05 23:39:29 +02:00
Jonathan Brielmaier
f1e0e5fde3
gnu: icedove: Update to 78.11.0 [fixes CVE-2021-29967]. 
* gnu/packages/gnuzilla.scm (icedove): Update to 78.11.0.
 2021-06-05 23:07:06 +02:00
Antero Mejr
7905b901a2
gnu: Add nitrocli. 
* gnu/packages/security-token.scm (nitrocli): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-06-05 22:17:50 +02:00
Antero Mejr
3463559d55
gnu: Add rust-base32-0.4. 
* gnu/packages/crates-io.scm (rust-base32-0.4): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-06-05 22:17:50 +02:00
Antero Mejr
add0c5f2b1
gnu: Add rust-envy-0.4. 
* gnu/packages/crates-io.scm (rust-envy-0.4): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-06-05 22:17:49 +02:00
Antero Mejr
7b5f5aa82b
gnu: Add rust-merge-0.1. 
* gnu/packages/crates-io.scm (rust-merge-0.1): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-06-05 22:17:49 +02:00
Antero Mejr
9c92fb862d
gnu: Add rust-merge-derive-0.1. 
* gnu/packages/crates-io.scm (rust-merge-derive-0.1): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-06-05 22:12:01 +02:00
Antero Mejr
ed30001472
gnu: Add rust-nitrokey-0.9. 
* gnu/packages/crates-io.scm (rust-nitrokey-0.9): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-06-05 22:11:53 +02:00
Antero Mejr
51f5292014
gnu: Add rust-progressing-3. 
* gnu/packages/crates-io.scm (rust-progressing-3): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-06-05 22:11:24 +02:00