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Author SHA1 Message Date
Tobias Geerinckx-Rice
0c6c9c00ab
gnu: Update more dead Google Code home pages. 
* gnu/packages/bioinformatics.scm (cutadapt, mosaik, pepr)[home-page]:
Update to their respective replacements.
 2016-12-14 22:08:51 +01:00
Tobias Geerinckx-Rice
62d652a710
gnu: mdds: Replace dead Google Code home-page. 
* gnu/packages/boost.scm (mdds)[home-page]: Update it.
 2016-12-14 21:59:40 +01:00
Tobias Geerinckx-Rice
50995554f8
gnu: chibi-scheme: Replace dead Google Code home-page. 
* gnu/packages/scheme.scm (chibi-scheme)[home-page]: Update it.
 2016-12-14 21:59:39 +01:00
Tobias Geerinckx-Rice
6b7877e12c
gnu: python-mock: Update source and home-page URIs. 
* gnu/packages/python.scm (python-mock)[source]: Use ‘pypi-uri’.
[home-page]: Replace dead Google Code home page.
 2016-12-14 21:59:39 +01:00
Tobias Geerinckx-Rice
ddf1cd519c
doc: Replace dead Google Code home page for cryptsetup. 
* doc/guix.texi (Mapped Devices): Update cryptsetup home page.
 2016-12-14 21:59:38 +01:00
Ricardo Wurmus
958f657656
gnu: libosinfo: Use stable URL for pci.ids. 
* gnu/packages/qemu.scm (libosinfo)[native-inputs]: Use a stable URL for
the pci.ids file.
 2016-12-14 21:58:32 +01:00
Ricardo Wurmus
4d93f312f0
graph: Add d3js backend. 
* d3.v3.js, graph.js: New files.
* Makefile.am (EXTRA_DIST): List them.
* guix/graph.scm (%d3js-backend): New variable.
(emit-d3js-prologue, emit-d3js-epilogue, emit-d3js-node,
emit-d3js-edge): New procedures.
(%graph-backends): Add %d3js-backend.
 2016-12-14 21:58:32 +01:00
Ricardo Wurmus
642339dc3f
graph: Add "list-backend" and "backend" options. 
* guix/graph.scm (%graph-backends): New variable.
* guix/scripts/graph.scm (lookup-backend, list-backends): New
procedures.
(%options): Add options for "backend" and "list-backends".
(show-help): Add help texts for "backend" and "list-backend" options.
(%default-options): Add "backend" default.
(guix-graph): Pass backend argument to "export-graph".
* doc/guix.texi (Invoking guix graph): Document the new options.
 2016-12-14 21:57:37 +01:00
Ricardo Wurmus
51377437a1
graph: Backend must have name and description. 
* guix/graph.scm (<graph-backend>): Add fields "name" and "description".
(%graphviz-backend): Provide values for name and description.
(export-graph): Ignore name and description when matching backends.
(graph-backend-name, graph-backend-description): New procedures.
* tests/graph.scm (make-recording-backend): Initialize name and
description fields of test graph-backend.
 2016-12-14 21:43:06 +01:00
Maxim Cournoyer
089f385a21
doc: Fix typo in Submitting Patches section. 
* doc/contributing.texi (Submitting Patches): Fix "could could" typo.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-12-14 14:57:50 -05:00
Marius Bakke
27fab2bf65
gnu: python-cryptography: Update to 1.7.1. 
* gnu/packages/python.scm (python-cryptography, python2-cryptography): Update
  to 1.7.1.
  [arguments]: Remove field.
(python-cryptography-vectors, python2-cryptography-vectors): Update to 1.7.1.
 2016-12-14 19:12:14 +01:00
Tobias Geerinckx-Rice
938f66cb86
gnu: man-pages: Update to 4.09. 
* gnu/packages/man.scm (man-pages): Update to 4.09.
 2016-12-14 19:09:49 +01:00
David Craven
ecee21473b
gnu: Add rustc. 
* gnu/packages/rust.scm (rustc): New variable.

Co-authored-by: Eric Le Bihan <eric.le.bihan.dev@free.fr>
 2016-12-14 16:30:43 +01:00
David Craven
423f9e4494
gnu: Add rust bootstrap binaries. 
* gnu/packages/rust.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add rust.scm.
 2016-12-14 16:30:42 +01:00
David Craven
22897187c1
gnu: llvm: Enable install utils. 
* gnu/packages/llvm.scm (llvm)[arguments]: Add -DLLVM_INSTALL_UTILS=ON
  to configure-flags.
 2016-12-14 16:30:42 +01:00
David Craven
8ac5298786
import: Add updater for rust crates. 
* guix/import/crate.scm (crate-package?, latest-release,
  %crate-updater): New variables.
* guix/scripts/refresh.scm (%updaters): Add crate updater.
* doc/guix.texi: Add crate updater to table.
 2016-12-14 16:30:42 +01:00
David Craven
3e0c036584
import: Add importer for rust crates. 
* guix/import/crate.scm: New file.
* guix/scripts/import/crate.scm: New file.
* guix/scripts/import.scm (importers): Add crate importer.
* tests/crate.scm: New file.
* doc/guix.texi: Add crate importer to table.
* Makefile.am (MODULES, SCM_TESTS): Add files.
 2016-12-14 16:30:42 +01:00
David Craven
bb3f36ed4c
import: utils: Add some utilities. 
* guix/import/utils.scm (maybe-inputs, maybe-native-inputs,
  package->definition): New variables.
 2016-12-14 16:30:42 +01:00
David Craven
4b3cb7f4bc
build-system: Add cargo build system. 
* guix/build-system/cargo.scm: New file.
* guix/build/cargo-build-system.scm: New file.
* Makefile.am (MODULES): Add files.
 2016-12-14 16:30:42 +01:00
Leo Famulari
7ab3ea4266
gnu: nss, nss-certs: Update to 3.27.2. 
* gnu/packages/gnuzilla.scm (nss): Update to 3.27.2.
* gnu/packages/certs.scm (nss-certs): Update to 3.27.2.
 2016-12-14 10:19:32 -05:00
Leo Famulari
5ac6b841c2
gnu: icedtea-8: Update to 3.2.0 [fixes CVE-2016-{5542,5554,5568,5573,5582,5597}]. 
* gnu/packages/java.scm (icedtea-8): Update to 3.2.0.
[arguments]: Pass '--disable-system-pcsc' and '--disable-system-sctp'
to #:configure-flags.
 2016-12-14 10:19:32 -05:00
Leo Famulari
ab129dac7d
gnu: icedtea-7: Update to 2.6.8 [fixes CVE-2016-{5542,5554,5568,5573,5582,5597}] 
* gnu/packages/java.scm (icedtea-7): Update to 2.6.8.
 2016-12-14 10:19:29 -05:00
Ludovic Courtès
af72a21a69
upstream: Use first url when it lacks an extension. 
* guix/upstream.scm (package-update): Use a url from the list when it
  lacks an extension.
 2016-12-14 14:20:50 +01:00
Ben Woodcroft
ce3f92e701
gnu: Add r-bit64. 
* gnu/packages/statistics.scm (r-bit64): New variable.
 2016-12-14 20:43:28 +10:00
Ben Woodcroft
42066e6b4a
gnu: Add r-bit. 
* gnu/packages/statistics.scm (r-bit): New variable.
 2016-12-14 20:43:28 +10:00
Mark H Weaver
5a3849443a
gnu: linux-libre: Update to 4.9. 
* gnu/packages/linux.scm (%linux-libre-version, %linux-libre-hash)
(linux-libre): Update to 4.9.
* gnu/packages/linux-libre-4.8-x86_64.conf,
gnu/packages/linux-libre-4.8-i686.conf: Delete files.
* gnu/packages/linux-libre-4.9-x86_64.conf,
gnu/packages/linux-libre-4.9-i686.conf: New files.
* Makefile.am (KCONFIGS): Update accordingly.
 2016-12-14 03:27:26 -05:00
Ludovic Courtès
4fbd0f4f86
gnu: guile-next: Update to 2.1.5. 
* gnu/packages/guile.scm (guile-next): Update to 2.1.5.
[properties]: Add 'upstream-name', 'ftp-server', and 'ftp-directory'.
 2016-12-14 08:48:38 +01:00
Ludovic Courtès
e8a463e646
gnu: usbutils: Update to 008. 
* gnu/packages/linux.scm (usbutils): Update to 008.
[inputs]: Add EUDEV.
 2016-12-14 00:22:49 +01:00
Ludovic Courtès
3232613e63
gnu: wireless-regdb: Update to 2016.06.10. 
* gnu/packages/linux.scm (wireless-regdb): Update to 2016.06.10.
 2016-12-14 00:22:49 +01:00
Christopher Baines
4b41febf9c
services: mysql: Add port to configuration 
* gnu/services/databases.scm (<mysql-configuration>): Add port field.
(mysql-configuration-file): Use the port field when creating the
configuration file.
* doc/guix.texi (Database Services): Document it.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2016-12-14 00:22:49 +01:00
Marius Bakke
3f1b4bc316
gnu: xf86-input-keyboard: Update to 1.9.0. 
* gnu/packages/xorg.scm (xf86-input-keyboard): Update to 1.9.0.
 2016-12-13 20:39:01 +01:00
Marius Bakke
12f3af5f1a
gnu: xf86-video-ati: Update to 7.8.0. 
* gnu/packages/xorg.scm (xf86-video-ati): Update to 7.8.0.
 2016-12-13 20:37:13 +01:00
Marius Bakke
546856a3de
gnu: xf86-input-libinput: Update to 0.23.0. 
* gnu/packages/xorg.scm (xf86-input-libinput): Update to 0.23.0.
 2016-12-13 20:31:29 +01:00
Tobias Geerinckx-Rice
d7f84eab02
gnu: iproute2: Update to 4.9.0. 
* gnu/packages/linux.scm (iproute2): Update to 4.9.0.
[home-page]: Point to the latest attempt, and use HTTPS.
 2016-12-13 19:32:34 +01:00
Alex Kost
bee075e706
gnu: libjpeg-turbo: Fix typo. 
This is a followup to commit e90a706e16.

* gnu/packages/image.scm (libjpeg-turbo): Remove extra "\".
 2016-12-13 19:56:07 +03:00
Ludovic Courtès
1975ec69e7
gnu: epic5: Fix 'license' field to contain only licenses. 
* gnu/packages/irc.scm (epic5)[license]: Call 'license:non-copyleft'.
 2016-12-13 17:24:30 +01:00
Efraim Flashner
1d0814670c
gnu: python-pyqt: Update to 5.7. 
* gnu/packages/qt.scm (python-pyqt): Update to 5.7.
 2016-12-13 15:11:25 +02:00
Efraim Flashner
e5a12fba82
gnu: onionshare: Update to 0.9.2 (fixes CVE-2016-5026). 
* gnu/packages/tor.scm (onionshare): Update to 0.9.2.
[source]: Remove patch.
[arguments]: Update substitutions for new version.
* gnu/packages/patches/onionshare-fix-install-paths.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2016-12-13 13:12:31 +02:00
Ben Woodcroft
991e143d25
gnu: diamond: Update to 0.8.29. 
* gnu/packages/bioinformatics.scm (diamond): Update to 0.8.29.
 2016-12-13 20:01:56 +10:00
Ben Woodcroft
ced1c496aa
gnu: orfm: Update to 0.6.1. 
* gnu/packages/bioinformatics.scm (orfm): Update to 0.6.1.
 2016-12-13 20:00:50 +10:00
Efraim Flashner
310248c621
gnu: libsrtp: Fix building on mips. 
* gnu/packages/telephony.scm (libsrtp)[arguments]: Add substitution
changing variable name from 'mips' to 'mips_value'. Also substitute
dictionary location in test suite.
 2016-12-13 11:15:49 +02:00
Efraim Flashner
6f09178d2a
gnu: libsrtp: Have source use file-name. 
* gnu/packages/telephony.scm (libsrtp)[source]: Add file-name field.
 2016-12-13 11:15:48 +02:00
Efraim Flashner
e90a706e16
gnu: libjpeg-turbo: Fix build on mips. 
* gnu/packages/image.scm (libjpeg-turbo)[arguments]: Add substitution to
set variable type before use.
 2016-12-13 11:15:32 +02:00
Marius Bakke
61dd253f8e
gnu: lftp: Update to 4.7.4. 
* gnu/packages/ftp.scm (lftp): Update to 4.7.4.
[home-page]: Change to new domain.
[source]: Adjust to new domain. Add mirror.
 2016-12-13 09:38:01 +01:00
Marius Bakke
d660f7be6d
gnu: python-setuptools: Update to 31.0.0. 
* gnu/packages/python.scm (python-setuptools, python2-setuptools): Update to
31.0.0.
[source]: Use 'pypi-uri'.
[license]: Update for bundled libraries.
 2016-12-13 09:37:49 +01:00
Marius Bakke
ad04bd6b2a
gnu: duplicity: Use 'modify-phases' syntax. 
* gnu/packages/backup.scm (duplicity)[arguments]: Use 'modify-phases'.
 2016-12-13 09:37:43 +01:00
Eric Bavier
ff55fe5599
import: cpan: Add updater. 
* guix/import/cpan.scm (module->dist-name): Fetch the field of interest.
(cpan-fetch): Accept release name rather than module name.
(fix-source-url): Rename to ...
(cpan-source-url): ... this.  Take metadata as parameter.
(package->upstream-name, cpan-version, cpan-package?, latest-release):
New procedures.
(cpan-module->sexp): Use cpan-version and cpan-source-url.
(%cpan-updater): New variable.
* guix/scripts/refresh.scm (%updaters): Add %CPAN-UPDATER.
 2016-12-12 22:22:33 -06:00
Eric Bavier
d391ad57d6
import: cpan: Move core-module? to top-level. 
* guix/import/cpan.scm (cpan-module->sexp): Move local core-module?
procedure to ...
(core-module?): ... here.
 2016-12-12 22:22:33 -06:00
Eric Bavier
63773200d7
import: json: Silence json-fetch output. 
* guix/import/json.scm (json-fetch): Use http-fetch instead of url-fetch
to avoid writing to stdout and a temporary file for each invocation.
* guix/import/gem.scm (rubygems-fetch): Do not redirect json-fetch
output to /dev/null.
* guix/import/pypi.scm (pypi-fetch): Likewise.
 2016-12-12 22:22:02 -06:00
Tobias Geerinckx-Rice
7843f276d1
gnu: xf86-video-nouveau: Update to 1.0.13. 
* gnu/packages/xorg.scm (xf86-video-nouveau): Update to 1.0.13.
 2016-12-13 04:59:22 +01:00