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Author SHA1 Message Date
Mark H Weaver
3ebbf6d218
gnu: linux-libre: Update to 4.14.1. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.14.1.
(%linux-libre-hash): Update hash.
 2017-11-21 21:22:30 -05:00
Mark H Weaver
86f914e3a4
gnu: linux-libre@4.9: Update to 4.9.64. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.64.
 2017-11-21 21:21:09 -05:00
Mark H Weaver
1dc37cf113
gnu: linux-libre@4.4: Update to 4.4.100. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.100.
 2017-11-21 21:20:33 -05:00
Kei Kebreau
ab2ccf4cf5
gnu: lmms: Fix build. 
* gnu/packages/music.scm (lmms)[arguments]: Add phases "remove-Werror" and
"make-manpages-writable".
 2017-11-21 20:17:26 -05:00
Ludovic Courtès
cd295fbe17
Revert "Add (guix self) and use it when pulling." 
This reverts commit 5f93d97005.

'guix pull' would fail because (guix self) needs 'scheme-files'
from (guix discovery), which was not exported until now.
 2017-11-21 23:53:10 +01:00
Ricardo Wurmus
aa33cc29ca
gnu: idr: Update to 2.0.3. 
* gnu/packages/bioinformatics.scm (idr): Update to 2.0.3.
[source]: Add snippet to remove generated code.
 2017-11-21 23:17:43 +01:00
Ricardo Wurmus
40590caf3b
gnu: idr: Correct license. 
* gnu/packages/bioinformatics.scm (idr)[license]: Change to GPLv2+.
 2017-11-21 23:17:43 +01:00
Ludovic Courtès
5f93d97005
Add (guix self) and use it when pulling. 
This mitigates <https://bugs.gnu.org/27284>.

* guix/self.scm: New file.
* Makefile.am (MODULES): Add it.
* build-aux/build-self.scm (libgcrypt, zlib, gzip, bzip2, xz)
(false-if-wrong-guile, package-for-current-guile, guile-json)
(guile-ssh, guile-git, guile-bytestructures): Remove.
(build): Rewrite to simply delegate to 'compiled-guix'.
* gnu/packages.scm (%distro-root-directory): Rewrite to try different
directories.
* guix/discovery.scm (guix): Export 'scheme-files'.
* guix/scripts/pull.scm (build-and-install): Split into...
(install-latest): ... this.  New procedure.  And...
(build-and-install): ... this, which now takes a monadic value argument.
(indirect-root-added): Remove.
(guix-pull): Call 'add-indirect-root'.  Call 'build-from-source' and
pass the result to 'build-and-install'.
 2017-11-21 23:09:16 +01:00
Marius Bakke
5c1f38bf8b
gnu: guix: Update snapshot. 
* gnu/packages/package-management.scm (guix): Update to 953c2de.
 2017-11-21 22:55:34 +01:00
Marius Bakke
953c2de706
tests: Disable test for freed disk space that fails on Btrfs. 
This is a follow-up to commit 40e89f5be6.

* tests/store.scm ("dead path can be explicitly collected"): Don't check
that (> freed 0).
* gnu/packages/package-management.scm (guix)[arguments]<#:phases>: Remove
workaround for the same problem.
 2017-11-21 22:46:55 +01:00
Pierre Langlois
d1451fa0d0
gnu: taglib: Update to 1.11.1 and fix home page. 
* gnu/packages/mp3.scm (taglib)[version]: Update to 1.11.1.
[arguments]: Configure with -DBUILD_SHARED_LIBS=ON.
[home-page]: Change to http://taglib.org.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-11-21 22:18:44 +01:00
Rutger Helling
d280a0faea
gnu: retroarch: Update to 1.6.9. 
* gnu/packages/games.scm (retroarch): Update to 1.6.9.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-11-21 22:08:02 +01:00
Marius Bakke
a28835a007
gnu: gnupg: Update to 2.2.3. 
* gnu/packages/gnupg.scm (gnupg): Update to 2.2.3.
 2017-11-21 22:08:02 +01:00
Marius Bakke
0c417d955e
gnu: orc: Update to 0.4.28. 
* gnu/packages/gstreamer.scm (orc): Update to 0.4.28.
 2017-11-21 22:08:02 +01:00
Marius Bakke
b63466f2bc
gnu: samba: Update to 4.7.3 [fixes CVE-2017-14746 and CVE-2017-15275]. 
* gnu/packages/samba.scm (samba): Update to 4.7.3.
 2017-11-21 22:08:02 +01:00
Marius Bakke
3151345c57
gnu: signify: Update to 23. 
* gnu/packages/crypto.scm (signify): Update to 23.
 2017-11-21 22:08:01 +01:00
Marius Bakke
40e89f5be6
gnu: guix: Disable test that fails on Btrfs. 
Works around <https://bugs.gnu.org/29363>.
Reported by Rutger Helling <rhelling@mykolab.com>.

* gnu/packages/package-management.scm (guix)[arguments]: Rename
'disable-container-tests' phase to 'disable-failing-tests' and add
substitution to disable test for freed disk space.
 2017-11-21 22:07:14 +01:00
Rutger Helling
9a87aa814a
gnu: retroarch: Update to 1.6.8. 
* gnu/packages/games.scm (retroarch): Update to 1.6.8.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-11-21 12:53:09 -05:00
Rutger Helling
7bd4103eb7
gnu: cdogs-sdl: Update to 0.6.6. 
* gnu/packages/games.scm (cdogs-sdl): Update to 0.6.6.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-11-21 12:53:09 -05:00
Rutger Helling
cb9b1a0496
gnu: procenv: Update to 0.50. 
* gnu/packages/linux.scm (procenv): Update to 0.50.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-11-21 12:53:09 -05:00
Rutger Helling
760e504dcb
gnu: you-get: Update to 0.4.964. 
* gnu/packages/video.scm (you-get): Update to 0.4.964.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-11-21 12:53:08 -05:00
Christopher Baines
a0fe7c0645
gnu: Patch path to locale in gnome-desktop. 
* gnu/packages/gnome.scm (gnome-desktop)[arguments]: Add 'patch-path phase to
  get libgnome-desktop to use the full path to the locale binary.
 2017-11-21 08:41:26 +00:00
Tobias Geerinckx-Rice
0056f4cc57
gnu: knot: Update licence information. 
* gnu/packages/dns.scm (knot)[license]: Add PUBLIC-DOMAIN. Expand comments.
 2017-11-21 02:53:02 +01:00
Tobias Geerinckx-Rice
023ef01354
gnu: knot: Support dnstap query logging. 
* gnu/packages/dns.scm (knot)[source]: No longer delete dnstap.  It appears
that dnstap is intended to be bundled and modified.
[inputs]: Add fstrm and protobuf-c.
[arguments]: Add ‘--with-module-dnstap=yes’ to #:configure-flags.
 2017-11-21 02:53:01 +01:00
Tobias Geerinckx-Rice
7e685deeb7
gnu: Use ‘license:’ prefix in (gnu packages protobuf). 
* gnu/packages/protobuf.scm (fstrm, protobuf, protobuf-2, protobuf-c)
(python-protobuf, python2-protobuf): Use ‘license:’ prefix.
 2017-11-21 02:53:01 +01:00
Tobias Geerinckx-Rice
7d9935b47e
gnu: Add fstrm. 
* gnu/packages/protobuf.scm (fstrim): New public variable.
 2017-11-21 02:53:01 +01:00
Tobias Geerinckx-Rice
ffe7eee59c
gnu: protobuf: Add ‘static’ output. 
* gnu/packages/protobuf.scm (protobuf)[outputs]: New field.
[arguments]: Add new ‘move-static-libraries’ phase.
 2017-11-21 02:53:01 +01:00
Tobias Geerinckx-Rice
ac1f1aa270
gnu: perl-devel-stacktrace: Update to 2.03. 
* gnu/packages/perl.scm (perl-devel-stacktrace): Update to 2.03.
 2017-11-21 02:53:00 +01:00
Tobias Geerinckx-Rice
733f94b339
gnu: btrfs-progs: Update to 4.14. 
* gnu/packages/linux.scm (btrfs-progs): Update to 4.14.
 2017-11-21 02:53:00 +01:00
Tobias Geerinckx-Rice
e26e55c86c
gnu: nss: Mark up description. 
* gnu/packages/gnuzilla.scm (nss)[description]: Use @dfn.
 2017-11-21 02:53:00 +01:00
Tobias Geerinckx-Rice
74a83085da
gnu: eid-mw: Update to 4.3.4. 
* gnu/packages/security-token.scm (eid-mw): Update to 4.3.4.
Fix up indentation.
 2017-11-21 02:53:00 +01:00
Leo Famulari
ebde40a14a
gnu: musl: Update to 1.1.18. 
* gnu/packages/musl.scm (musl): Update to 1.1.18.
 2017-11-20 18:59:54 -05:00
Danny Milosavljevic
41916bea1b
gnu: Add python-pyodbc. 
* gnu/packages/databases.scm (python-pyodbc, python2-pyodbc): New variables.
 2017-11-20 20:47:59 +01:00
Ludovic Courtès
bd7e136d29
Add semicolon in commands that set GUIX_PROFILE. 
Fixes <https://bugs.gnu.org/28223>.
Reported by Rosebud Uplink <Uplink.Introversion@outlook.com>.

* doc/guix.texi (Binary Installation): Add missing semicolon after
'GUIX_PROFILE=' line.
(Invoking guix package): Likewise.
* gnu/system.scm (operating-system-etc-service)[profile]: Likewise.
* guix/build/profiles.scm (build-etc/profile): Likewise.
 2017-11-20 18:43:10 +01:00
Rutger Helling
4b1ba80cef
gnu: wget2: Switch to official URL. 
* gnu/packages/wget.scm (wget2): Switch to official URL.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-11-20 18:43:10 +01:00
Nicolas Goaziou
aa6ae8d324
gnu: scribus: Fix No module named _sysconfigdata_nd. 
* gnu/packages/scribus.scm (scribus): Wrap PATH with expected Python around
  executable.

Fixes <https://bugs.gnu.org/25035>.
 2017-11-20 18:14:47 +01:00
Mark H Weaver
92be9ee7e1
gnu: linux-libre@4.9: Update to 4.9.63. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.63.
 2017-11-20 04:39:04 -05:00
Mark H Weaver
4bee9040fe
gnu: linux-libre@4.4: Update to 4.4.99. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.99.
 2017-11-20 04:38:20 -05:00
Oleg Pykhalov
036f1eedcc
gnu: Add python-clf. 
* gnu/packages/web.scm (python-clf): New variable.
 2017-11-20 09:30:27 +03:00
Marius Bakke
08cc0ef096
gnu: kodi: Update snapshot. 
* gnu/packages/kodi.scm (kodi): Update to 18.0_alpha-67fd70f.
 2017-11-20 00:17:39 +01:00
Marius Bakke
aace9be80b
gnu: gcc@6: Respect SOURCE_DATE_EPOCH in __DATE__ and __TIME__ macros. 
* gnu/packages/patches/gcc-6-source-date-epoch-1.patch,
gnu/packages/patches/gcc-6-source-date-epoch-2.patch: New files.
* gnu/local.mk (dist_patch_DATA): Register them.
* gnu/packages/gcc.scm (gcc-6)[source]: Use them.
 2017-11-20 00:17:39 +01:00
Ludovic Courtès
485e006c9e
gnu: guix: Update snapshot. 
* gnu/packages/package-management.scm (guix): Update to 0b4c385.
 2017-11-20 00:12:25 +01:00
Rutger Helling
0b4c385f8f
gnu: gajim: Add python2-axolotl to inputs. 
* gnu/packages/messaging.scm (gajim)[inputs]: Add python2-axolotl.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-11-19 23:16:09 +01:00
Rutger Helling
0ce5cb02fa
gnu: qtox: Add filteraudio to inputs. 
* gnu/packages/messaging.scm (qtox)[inputs]: Add filteraudio.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-11-19 23:16:01 +01:00
Rutger Helling
27015d6fbd
gnu: c-toxcore: Update to 0.1.10. 
* gnu/packages/messaging.scm (c-toxcore): Update to 0.1.10.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-11-19 23:15:55 +01:00
Efraim Flashner
118a8eccb0
gnu: audacity: Fix building on non-Intel systems. 
* gnu/packages/audio.scm (audacity)[arguments]: On non-Intel systems add
a configure-flag to disable SSE optimizations.
 2017-11-19 22:07:26 +02:00
Marius Bakke
a93447b89a
gnu: nss, nss-certs: Update to 3.34. 
* gnu/packages/certs.scm (nss-certs): Update to 3.34.
* gnu/packages/gnuzilla.scm (nss): Update to 3.34.
 2017-11-19 13:19:14 +01:00
Marius Bakke
0632c6a84d
gnu: bitcoin: Update to 0.15.1. 
* gnu/packages/finance.scm (bitcoin-core): Update to 0.15.1.
 2017-11-19 13:05:15 +01:00
Marius Bakke
53bbafd2db
gnu: strace: Update to 4.20. 
* gnu/packages/linux.scm (strace): Update to 4.20.
 2017-11-19 13:02:27 +01:00
Marius Bakke
baba4d673b
gnu: samba: Update to 4.7.2. 
* gnu/packages/samba.scm (samba): Update to 4.7.2.
 2017-11-19 12:59:35 +01:00
Marius Bakke
a0e52af9cf
gnu: tevent: Update to 0.9.34. 
* gnu/packages/samba.scm (tevent): Update to 0.9.34.
 2017-11-19 12:57:34 +01:00
ng0
c146314566
Update email address for ng0. 2017-11-19 12:13:43 +02:00
Christopher Baines
f4dd303282
gnu: Patch ikiwiki to set PERL5LIB in the CGI wrapper. 
This helps with CGI support.

* gnu/packages/web.scm (ikiwik)[arguments]: Add 'include-PERL5LIB-in-wrapper
  phase.
 2017-11-19 09:17:55 +00:00
Efraim Flashner
84bd924382
gnu: nano: Update to 2.9.0. 
* gnu/packages/nano.scm (nano): Update to 2.9.0.
 2017-11-18 21:57:31 +02:00
Efraim Flashner
5af27a82c3
gnu: owncloud-client: Update to 2.3.4. 
* gnu/packages/sync.scm (owncloud-client): Update to 2.3.4.
 2017-11-18 21:50:11 +02:00
Efraim Flashner
6563d58c7e
gnu: owncloud-client: Don't check for updates. 
* gnu/packages/sync.scm (owncloud-client)[source]: Add patch.
* gnu/packages/patches/owncloud-disable-updatecheck.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
 2017-11-18 21:50:08 +02:00
Rutger Helling
42ca84be92
gnu: libreoffice: Remove GTK+ 2. 
LibreOffice doesn't need to use both GTK+ 2 and GTK+ 3.

* gnu/packages/libreoffice.scm (libreoffice)[inputs]: Remove gtk+-2.
[configure-flags]: Add "--disable-gtk".

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-11-18 12:30:18 -05:00
Leo Famulari
a7963b495e
gnu: libassuan: Update to 2.4.4. 
* gnu/packages/gnupg.scm (libassuan): Update to 2.4.4.
 2017-11-18 12:21:35 -05:00
Jan Nieuwenhuizen
05c80e61a2
gnu: mes: Update to 0.11. 
* gnu/packages/mes.scm (mes): Update to 0.11.
 2017-11-18 17:04:56 +01:00
Ricardo Wurmus
3182a1d2f1
gnu: audacity: Update to 2.2.0. 
* gnu/packages/patches/audacity-build-with-system-portaudio.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/audio.scm (audacity): Update to 2.2.0.
[source]: Add patch to build with system portaudio; add snippet to remove most
bundled libraries.
[inputs]: Replace "gtk+-2" with "gtk+", replace "wxwidgets-gtk2" with
"wxwidgets"; remove "libsbsms"; add "suil" and "portmidi".
[arguments]: Adjust configure flags to avoid using bundled libraries; remove
phase "autoreconf"; add phases "fix-sbsms-check" and "use-upstream-headers".
 2017-11-18 16:07:57 +01:00
Ricardo Wurmus
218d1ddef8
gnu: java-mail: Let build phase return boolean. 
* gnu/packages/java.scm (java-mail)[arguments]: Let build phase
"move-version.java" return #t.
 2017-11-18 12:58:08 +01:00
Ricardo Wurmus
04e91134af
gnu: bitshuffle-for-snappy: Simplify. 
* gnu/packages/compression.scm (bitshuffle-for-snappy)[arguments]: Simplify
Makefile generation.
 2017-11-18 12:56:35 +01:00
Ricardo Wurmus
b8e2af9a05
gnu: bitshuffle: Let build phase return #t. 
* gnu/packages/compression.scm (bitshuffle)[arguments]: Let
"make-required-dir" return #t.
 2017-11-18 12:51:22 +01:00
Ricardo Wurmus
653f2b92b9
gnu: python-pylast: Update to 2.0.0. 
* gnu/packages/music.scm (python-pylast): Update to 2.0.0.
[native-inputs]: Add python-pycodestyle and python-flaky.
 2017-11-18 12:45:19 +01:00
Ricardo Wurmus
33dc54b08c
gnu: Move date/time packages from python.scm to time.scm. 
* gnu/packages/python.scm (python-pytz, python2-pytz, python-dateutil,
python2-dateutil, python-parsedatetime, python2-parsedatetime,
python-tzlocal, python-isodate, python2-isodate, python-iso8601,
python2-iso8601, python-monotonic, python2-monotonic, python-pyrfc3339,
python2-pyrfc3339, python-arrow, python2-arrow, python-aniso8601,
python2-aniso8601): Move from here...
* gnu/packages/time.scm: ...to here.
* gnu/packages/calendar.scm,
gnu/packages/check.scm,
gnu/packages/django.scm,
gnu/packages/ebook.scm,
gnu/packages/gnome.scm,
gnu/packages/irc.scm,
gnu/packages/jrnl.scm,
gnu/packages/mail.scm,
gnu/packages/openstack.scm,
gnu/packages/package-management.scm,
gnu/packages/python-crypto.scm,
gnu/packages/python-web.scm,
gnu/packages/rdf.scm,
gnu/packages/statistics.scm,
gnu/packages/tls.scm,
gnu/packages/tryton.scm,
gnu/packages/version-control.scm: Adjust accordingly.
 2017-11-18 12:45:19 +01:00
Ricardo Wurmus
762b5a89c2
gnu: Move more testing packages from python.scm to check.scm. 
* gnu/packages/python.scm (python-flexmock, python2-flexmock,
python-freezegun, python2-freezegun, python-flaky, python2-flaky): Move from
here...
* gnu/packages/check.scm: ...to here.
 2017-11-18 12:45:19 +01:00
Julien Lepiller
a0837294ab
gnu: Add java-plexus-container-default. 
* gnu/packages/java.scm (java-plexus-container-default): New variable.
 2017-11-18 11:30:25 +01:00
Julien Lepiller
b51df3ca6f
gnu: Add java-plexus-archiver. 
* gnu/packages/java.scm (java-plexus-archiver): New variable.
 2017-11-18 11:30:15 +01:00
Julien Lepiller
0858b9dc9d
gnu: Add java-plexus-io. 
* gnu/packages/java.scm (java-plexus-io): New variable.
 2017-11-18 11:30:13 +01:00
Julien Lepiller
0726d4ea7c
gnu: Add java-plexus-container-default-bootstrap. 
* gnu/packages/java.scm (java-plexus-container-default-bootstrap): New
variable.
 2017-11-18 11:30:10 +01:00
Julien Lepiller
b80027e5e7
gnu: Add java-tukaani-xz. 
* gnu/packages/java.scm (java-tukaani-xz): New variable.
 2017-11-18 11:30:08 +01:00
Julien Lepiller
78745d331d
gnu: Add java-geronimo-xbean-reflect. 
* gnu/packages/java.scm (java-geronimo-xbean-reflect): New variable.
 2017-11-18 11:30:05 +01:00
Julien Lepiller
0b54e190ab
gnu: Add java-jdom. 
* gnu/packages/java.scm (java-jdom): New variable.
 2017-11-18 11:30:03 +01:00
Julien Lepiller
2caf873e86
gnu: Add java-log4j-1.2-api. 
* gnu/packages/java.scm (java-log4j-1.2-api): New variable.
 2017-11-18 11:30:01 +01:00
Julien Lepiller
dfef4231f7
gnu: Add java-log4j-core. 
* gnu/packages/java.scm (java-log4j-core): New variable.
 2017-11-18 11:29:58 +01:00
Julien Lepiller
46c6905a22
gnu: Add java-kafka-clients. 
* gnu/packages/java.scm (java-kafka-clients): New variable.
 2017-11-18 11:29:55 +01:00
Julien Lepiller
5aa2f3f44b
gnu: Add java-commons-beanutils. 
* gnu/packages/java.scm (java-commons-beanutils): New variable.
 2017-11-18 11:29:53 +01:00
Julien Lepiller
229a9864b6
gnu: Add java-commons-collections. 
* gnu/packages/java.scm (java-commons-collections): New variable.
 2017-11-18 11:29:51 +01:00
Julien Lepiller
51263ff5d2
gnu: Add java-commons-csv. 
* gnu/packages/java.scm (java-commons-csv): New variable.
 2017-11-18 11:29:48 +01:00
Julien Lepiller
217b20e4db
gnu: Add java-jeromq. 
* gnu/packages/java.scm (java-jeromq): New variable.
 2017-11-18 11:29:45 +01:00
Julien Lepiller
3ff47c6665
gnu: Add java-mail. 
* gnu/packages/java.scm (java-mail): New variable.
 2017-11-18 11:29:42 +01:00
Julien Lepiller
5fb3e82217
gnu: Add java-jboss-jms-api-spec. 
* gnu/packages/java.scm (java-jboss-jms-api-spec): New variable.
 2017-11-18 11:29:38 +01:00
Julien Lepiller
823997e969
gnu: Add java-iq80-snappy. 
* gnu/packages/compression.scm (java-iq80-snappy): New variable.
 2017-11-18 11:29:34 +01:00
Julien Lepiller
cea8346688
gnu: Add java-snappy. 
* gnu/packages/compression.scm (java-snappy): New variable.
 2017-11-18 11:29:31 +01:00
Julien Lepiller
9869bb1296
gnu: Add bitshuffle. 
* gnu/packages/compression.scm (bitshuffle): New variable.
 2017-11-18 11:29:25 +01:00
Ricardo Wurmus
c5a8ecb6d3
gnu: Remove duplicates from (gnu packages tex). 
* gnu/packages/tex.scm (texlive-latex-hyperref, texlive-latex-fancyvrb):
Remove duplicates.
 2017-11-18 11:18:41 +01:00
Ricardo Wurmus
261b38a978
gnu: r-genomeinfodbdata: Update to 0.99.1. 
* gnu/packages/bioinformatics.scm (r-genomeinfodbdata): Update to 0.99.1.
 2017-11-18 11:18:41 +01:00
Ricardo Wurmus
592f4a9434
gnu: r-go-db: Update to 3.5.0. 
* gnu/packages/bioinformatics.scm (r-go-db): Update to 3.5.0.
 2017-11-18 11:18:41 +01:00
Ricardo Wurmus
e4664290ce
gnu: r-org-ce-eg-db: Update to 3.5.0. 
* gnu/packages/bioinformatics.scm (r-org-ce-eg-db): Update to 3.5.0.
 2017-11-18 11:18:40 +01:00
Ricardo Wurmus
19fc299f68
gnu: r-org-dm-eg-db: Update to 3.5.0. 
* gnu/packages/bioinformatics.scm (r-org-dm-eg-db): Update to 3.5.0.
 2017-11-18 11:18:40 +01:00
Ricardo Wurmus
f3569f5218
gnu: r-org-mm-eg-db: Update to 3.5.0. 
* gnu/packages/bioinformatics.scm (r-org-mm-eg-db): Update to 3.5.0.
 2017-11-18 11:18:40 +01:00
Ricardo Wurmus
57dc9b58db
gnu: r-genomationdata: Update to 1.10.0. 
* gnu/packages/bioinformatics.scm (r-genomationdata): Update to 1.10.0.
 2017-11-18 11:18:39 +01:00
Ricardo Wurmus
9ef9c6489f
gnu: Remove duplicates from (gnu packages statistics). 
* gnu/packages/statistics.scm (r-cluster, r-codetools, r-kernsmooth): Remove
duplicates.
 2017-11-18 11:18:39 +01:00
Ricardo Wurmus
9c2d0a0369
gnu: Remove duplicate from (gnu packages gnupg). 
* gnu/packages/gnupg.scm (perl-gnupg-interface): Remove duplicate.
 2017-11-18 11:18:39 +01:00
Ricardo Wurmus
90dbd984f8
gnu: Remove duplicate from (gnu packages bioinformatics). 
* gnu/packages/bioinformatics.scm (r-annotationfilter): Remove duplicate.
 2017-11-18 11:18:39 +01:00
Ricardo Wurmus
c151b0b633
gnu: Remove duplicate from (gnu packages cran). 
* gnu/packages/cran.scm (r-bbmle): Remove duplicate.
 2017-11-18 11:18:38 +01:00
Ricardo Wurmus
4982d0ac41
gnu: Remove duplicates from (gnu packages java). 
* gnu/packages/java.scm (java-commons-net, java-asm): Remove duplicates.
 2017-11-18 11:18:38 +01:00
Ricardo Wurmus
676507e388
gnu: r-org-hs-eg-db: Clarify description. 
* gnu/packages/bioinformatics.scm (r-org-hs-eg-db)[description]: Clarify.
 2017-11-18 11:18:38 +01:00
Ricardo Wurmus
d595fed33d
gnu: r-org-hs-eg-db: Update to 3.5.0. 
* gnu/packages/bioinformatics.scm (r-org-hs-eg-db): Update to 3.5.0.
 2017-11-18 11:18:37 +01:00
Ricardo Wurmus
ccedfd3a43
gnu: r-org-hs-eg-db: Remove duplicate package definition. 
* gnu/packages/bioinformatics.scm (r-org-hs-eg-db): Remove duplicate variable.
 2017-11-18 11:18:37 +01:00