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88332 Commits

Author SHA1 Message Date
Ricardo Wurmus
77082a3302
gnu: r-binman: Update to 0.1.3. 
* gnu/packages/cran.scm (r-binman): Update to 0.1.3.
 2022-09-20 17:02:26 +02:00
Ricardo Wurmus
72e5d0fe2d
gnu: r-scatterpie: Update to 0.1.8. 
* gnu/packages/cran.scm (r-scatterpie): Update to 0.1.8.
 2022-09-20 17:02:26 +02:00
Ricardo Wurmus
897c62ad00
gnu: r-posterior: Update to 1.3.1. 
* gnu/packages/cran.scm (r-posterior): Update to 1.3.1.
 2022-09-20 17:02:26 +02:00
Ricardo Wurmus
8b0e24e3e3
gnu: r-distributional: Update to 0.3.1. 
* gnu/packages/cran.scm (r-distributional): Update to 0.3.1.
[propagated-inputs]: Remove r-ellipsis.
 2022-09-20 17:02:25 +02:00
Ricardo Wurmus
4eabf31e36
gnu: r-projpred: Update to 2.2.0. 
* gnu/packages/cran.scm (r-projpred): Update to 2.2.0.
 2022-09-20 17:02:25 +02:00
Ricardo Wurmus
da4342ff53
gnu: r-latex2exp: Update to 0.9.5. 
* gnu/packages/cran.scm (r-latex2exp): Update to 0.9.5.
 2022-09-20 17:02:25 +02:00
Ricardo Wurmus
47a07d6c36
gnu: r-zseq: Update to 0.2.1. 
* gnu/packages/cran.scm (r-zseq): Update to 0.2.1.
 2022-09-20 17:02:25 +02:00
Ricardo Wurmus
4a124387c1
gnu: r-rstan: Update to 2.21.7. 
* gnu/packages/cran.scm (r-rstan): Update to 2.21.7.
 2022-09-20 17:02:25 +02:00
Ricardo Wurmus
c85630d207
gnu: r-tam: Update to 4.1-4. 
* gnu/packages/cran.scm (r-tam): Update to 4.1-4.
 2022-09-20 17:02:25 +02:00
Ricardo Wurmus
c1bf0bd4a6
gnu: r-cdm: Update to 8.2-6. 
* gnu/packages/cran.scm (r-cdm): Update to 8.2-6.
 2022-09-20 17:02:25 +02:00
Ricardo Wurmus
7469dc9b85
gnu: r-semplot: Update to 1.1.6. 
* gnu/packages/cran.scm (r-semplot): Update to 1.1.6.
 2022-09-20 17:02:25 +02:00
Ricardo Wurmus
b311dffdfb
gnu: r-regsem: Update to 1.9.3. 
* gnu/packages/cran.scm (r-regsem): Update to 1.9.3.
 2022-09-20 17:02:24 +02:00
Ricardo Wurmus
15ea8ca8ec
gnu: r-matrixextra: Update to 0.1.13. 
* gnu/packages/cran.scm (r-matrixextra): Update to 0.1.13.
 2022-09-20 17:02:24 +02:00
Ricardo Wurmus
d7e41a6251
gnu: r-matrixcalc: Update to 1.0-6. 
* gnu/packages/cran.scm (r-matrixcalc): Update to 1.0-6.
 2022-09-20 17:02:24 +02:00
Ricardo Wurmus
8643467fe3
gnu: r-quanteda: Update to 3.2.3. 
* gnu/packages/cran.scm (r-quanteda): Update to 3.2.3.
 2022-09-20 17:02:24 +02:00
Ricardo Wurmus
96a3a300c6
gnu: r-proxyc: Update to 0.3.2. 
* gnu/packages/cran.scm (r-proxyc): Update to 0.3.2.
 2022-09-20 17:02:24 +02:00
Ricardo Wurmus
8ebb59f598
gnu: r-qqconf: Update to 1.3.0. 
* gnu/packages/cran.scm (r-qqconf): Update to 1.3.0.
[propagated-inputs]: Remove r-dplyr, r-magrittr, and r-rlang.
 2022-09-20 17:02:24 +02:00
Ricardo Wurmus
f1896a804a
gnu: r-anndata: Update to 0.7.5.4. 
* gnu/packages/cran.scm (r-anndata): Update to 0.7.5.4.
 2022-09-20 17:02:24 +02:00
Ricardo Wurmus
b43a9a1e52
gnu: r-caret: Update to 6.0-93. 
* gnu/packages/cran.scm (r-caret): Update to 6.0-93.
 2022-09-20 17:02:24 +02:00
Ricardo Wurmus
5e3b1e75f7
gnu: r-gdina: Update to 2.9.3. 
* gnu/packages/cran.scm (r-gdina): Update to 2.9.3.
[propagated-inputs]: Add r-nloptr.
 2022-09-20 17:02:23 +02:00
Ricardo Wurmus
7739531995
gnu: r-randtoolbox: Update to 2.0.2. 
* gnu/packages/cran.scm (r-randtoolbox): Update to 2.0.2.
 2022-09-20 17:02:23 +02:00
Ricardo Wurmus
eca7c73a47
gnu: r-accsda: Update to 1.1.2. 
* gnu/packages/cran.scm (r-accsda): Update to 1.1.2.
 2022-09-20 17:02:23 +02:00
Ricardo Wurmus
1ac8852caa
gnu: r-pmcmrplus: Update to 1.9.6. 
* gnu/packages/cran.scm (r-pmcmrplus): Update to 1.9.6.
 2022-09-20 17:02:23 +02:00
Ricardo Wurmus
07de724b82
gnu: r-lifecycle: Update to 1.0.2. 
* gnu/packages/cran.scm (r-lifecycle): Update to 1.0.2.
 2022-09-20 17:02:23 +02:00
Ricardo Wurmus
2988d6859a
gnu: r-parameters: Update to 0.18.2. 
* gnu/packages/cran.scm (r-parameters): Update to 0.18.2.
 2022-09-20 17:02:23 +02:00
Ricardo Wurmus
1755c577bd
gnu: r-tidygraph: Update to 1.2.2. 
* gnu/packages/cran.scm (r-tidygraph): Update to 1.2.2.
 2022-09-20 17:02:23 +02:00
Ricardo Wurmus
01e279bb8b
gnu: r-terra: Update to 1.6-17. 
* gnu/packages/cran.scm (r-terra): Update to 1.6-17.
 2022-09-20 17:02:23 +02:00
Ricardo Wurmus
294e5589b9
gnu: r-graphlayouts: Update to 0.8.1. 
* gnu/packages/cran.scm (r-graphlayouts): Update to 0.8.1.
 2022-09-20 17:02:22 +02:00
Ricardo Wurmus
9686a975c7
gnu: r-covr: Update to 3.6.1. 
* gnu/packages/cran.scm (r-covr): Update to 3.6.1.
 2022-09-20 17:02:22 +02:00
Ricardo Wurmus
e434557c5a
gnu: r-patchwork: Update to 1.1.2. 
* gnu/packages/cran.scm (r-patchwork): Update to 1.1.2.
 2022-09-20 17:02:22 +02:00
Ricardo Wurmus
d7b35febfc
gnu: r-leiden: Update to 0.4.3. 
* gnu/packages/cran.scm (r-leiden): Update to 0.4.3.
 2022-09-20 17:02:22 +02:00
Ricardo Wurmus
e133664c54
gnu: r-uwot: Update to 0.1.14. 
* gnu/packages/cran.scm (r-uwot): Update to 0.1.14.
[propagated-inputs]: Remove r-rspectra.
 2022-09-20 17:02:22 +02:00
Ricardo Wurmus
4db93ca44b
gnu: r-umap: Update to 0.2.9.0. 
* gnu/packages/cran.scm (r-umap): Update to 0.2.9.0.
 2022-09-20 17:02:22 +02:00
Ricardo Wurmus
c9e6f29960
gnu: r-enrichr: Update to 3.1. 
* gnu/packages/cran.scm (r-enrichr): Update to 3.1.
[propagated-inputs]: Add r-curl.
 2022-09-20 17:02:22 +02:00
Ricardo Wurmus
3e9da8520d
gnu: r-sctransform: Update to 0.3.4. 
* gnu/packages/cran.scm (r-sctransform): Update to 0.3.4.
 2022-09-20 17:02:22 +02:00
Ricardo Wurmus
544479ba7d
gnu: r-lintr: Update to 3.0.1. 
* gnu/packages/cran.scm (r-lintr): Update to 3.0.1.
 2022-09-20 17:02:21 +02:00
Ricardo Wurmus
c027f3ce98
gnu: r-text2vec: Update to 0.6.2. 
* gnu/packages/cran.scm (r-text2vec): Update to 0.6.2.
 2022-09-20 17:02:21 +02:00
Ricardo Wurmus
25013b0ffd
gnu: r-rsparse: Update to 0.5.1. 
* gnu/packages/cran.scm (r-rsparse): Update to 0.5.1.
 2022-09-20 17:02:21 +02:00
Ricardo Wurmus
47676e6b9e
gnu: r-aplot: Update to 0.1.7. 
* gnu/packages/cran.scm (r-aplot): Update to 0.1.7.
 2022-09-20 17:02:21 +02:00
Ricardo Wurmus
12fca73dd8
gnu: r-ggtext: Update to 0.1.2. 
* gnu/packages/cran.scm (r-ggtext): Update to 0.1.2.
 2022-09-20 17:02:21 +02:00
Ricardo Wurmus
bcc7969a95
gnu: r-gridtext: Update to 0.1.5. 
* gnu/packages/cran.scm (r-gridtext): Update to 0.1.5.
[propagated-inputs]: Remove r-rcurl; add r-curl.
 2022-09-20 17:02:21 +02:00
Ricardo Wurmus
c47618d453
gnu: r-ggfun: Update to 0.0.7. 
* gnu/packages/cran.scm (r-ggfun): Update to 0.0.7.
 2022-09-20 17:02:21 +02:00
Ricardo Wurmus
3abd67e6cb
gnu: r-gbm: Update to 2.1.8.1. 
* gnu/packages/cran.scm (r-gbm): Update to 2.1.8.1.
 2022-09-20 17:02:20 +02:00
Ricardo Wurmus
ac9c3bee73
gnu: r-ggforce: Update to 0.3.4. 
* gnu/packages/cran.scm (r-ggforce): Update to 0.3.4.
[propagated-inputs]: Add r-lifecycle.
 2022-09-20 17:02:20 +02:00
Ricardo Wurmus
d414bb103b
gnu: r-tweenr: Update to 2.0.2. 
* gnu/packages/cran.scm (r-tweenr): Update to 2.0.2.
[propagated-inputs]: Remove r-rcpp; add r-cpp11 and r-vctrs.
 2022-09-20 17:02:20 +02:00
Ricardo Wurmus
43f4a370a3
gnu: r-bookdown: Update to 0.29. 
* gnu/packages/cran.scm (r-bookdown): Update to 0.29.
 2022-09-20 17:02:20 +02:00
Ricardo Wurmus
ef1b6a6318
gnu: r-spdep: Update to 1.2-5. 
* gnu/packages/cran.scm (r-spdep): Update to 1.2-5.
 2022-09-20 17:02:20 +02:00
Ricardo Wurmus
7e93dbc2bb
gnu: r-spdata: Update to 2.2.0. 
* gnu/packages/cran.scm (r-spdata): Update to 2.2.0.
[propagated-inputs]: Remove r-raster.
 2022-09-20 17:02:20 +02:00
Ricardo Wurmus
e44e07965c
gnu: r-gamlss-dist: Update to 6.0-5. 
* gnu/packages/cran.scm (r-gamlss-dist): Update to 6.0-5.
 2022-09-20 17:02:20 +02:00
Ricardo Wurmus
7b797d4a70
gnu: r-blockmodeling: Update to 1.1.3. 
* gnu/packages/cran.scm (r-blockmodeling): Update to 1.1.3.
 2022-09-20 17:02:19 +02:00
Ricardo Wurmus
36ab34a539
gnu: r-future-apply: Update to 1.9.1. 
* gnu/packages/cran.scm (r-future-apply): Update to 1.9.1.
 2022-09-20 17:02:19 +02:00
Ricardo Wurmus
7f220c890a
gnu: r-future: Update to 1.28.0. 
* gnu/packages/cran.scm (r-future): Update to 1.28.0.
 2022-09-20 17:02:19 +02:00
Ricardo Wurmus
ae15cb2141
gnu: r-globals: Update to 0.16.1. 
* gnu/packages/cran.scm (r-globals): Update to 0.16.1.
 2022-09-20 17:02:19 +02:00
Ricardo Wurmus
110c53067c
gnu: r-fields: Update to 14.1. 
* gnu/packages/cran.scm (r-fields): Update to 14.1.
 2022-09-20 17:02:19 +02:00
Ricardo Wurmus
1cd0e82a5f
gnu: r-gmp: Update to 0.6-6. 
* gnu/packages/cran.scm (r-gmp): Update to 0.6-6.
 2022-09-20 17:02:19 +02:00
Ricardo Wurmus
0d032e48e8
gnu: r-gargle: Update to 1.2.1. 
* gnu/packages/cran.scm (r-gargle): Update to 1.2.1.
 2022-09-20 17:02:19 +02:00
Ricardo Wurmus
b6bb01e680
gnu: r-ontologyindex: Update to 2.10. 
* gnu/packages/cran.scm (r-ontologyindex): Update to 2.10.
 2022-09-20 17:02:19 +02:00
Ricardo Wurmus
8cce3f51fc
gnu: r-als: Update to 0.0.7. 
* gnu/packages/cran.scm (r-als): Update to 0.0.7.
 2022-09-20 17:02:18 +02:00
Ricardo Wurmus
3c43993891
gnu: r-tractor-base: Update to 3.3.5.1. 
* gnu/packages/cran.scm (r-tractor-base): Update to 3.3.5.1.
 2022-09-20 17:02:18 +02:00
Ricardo Wurmus
45ad4c4c87
gnu: r-sparsesvd: Update to 0.2-1. 
* gnu/packages/cran.scm (r-sparsesvd): Update to 0.2-1.
 2022-09-20 17:02:18 +02:00
Ricardo Wurmus
5f65744b7d
gnu: r-tidytree: Update to 0.4.0. 
* gnu/packages/cran.scm (r-tidytree): Update to 0.4.0.
 2022-09-20 17:02:18 +02:00
Ricardo Wurmus
2e87c2e76c
gnu: r-waveslim: Update to 1.8.4. 
* gnu/packages/cran.scm (r-waveslim): Update to 1.8.4.
 2022-09-20 17:02:18 +02:00
Ricardo Wurmus
abb5525ffe
gnu: r-admisc: Update to 0.30. 
* gnu/packages/cran.scm (r-admisc): Update to 0.30.
 2022-09-20 17:02:18 +02:00
Ricardo Wurmus
941500d6ec
gnu: r-arm: Update to 1.13-1. 
* gnu/packages/cran.scm (r-arm): Update to 1.13-1.
 2022-09-20 17:02:18 +02:00
Ricardo Wurmus
9dbbd84bac
gnu: r-rcppalgos: Update to 2.6.0. 
* gnu/packages/cran.scm (r-rcppalgos): Update to 2.6.0.
 2022-09-20 17:02:18 +02:00
Ricardo Wurmus
09ed52404b
gnu: r-chk: Update to 0.8.1. 
* gnu/packages/cran.scm (r-chk): Update to 0.8.1.
 2022-09-20 17:02:18 +02:00
Ricardo Wurmus
e9eb863bde
gnu: r-tweedie: Update to 2.3.5. 
* gnu/packages/cran.scm (r-tweedie): Update to 2.3.5.
 2022-09-20 17:02:17 +02:00
Ricardo Wurmus
8766e41ecf
gnu: r-gert: Update to 1.9.0. 
* gnu/packages/cran.scm (r-gert): Update to 1.9.0.
 2022-09-20 17:02:17 +02:00
Ricardo Wurmus
53d46b7a83
gnu: r-gh: Update to 1.3.1. 
* gnu/packages/cran.scm (r-gh): Update to 1.3.1.
 2022-09-20 17:02:17 +02:00
Ricardo Wurmus
0045ed1e32
gnu: r-gitcreds: Update to 0.1.2. 
* gnu/packages/cran.scm (r-gitcreds): Update to 0.1.2.
 2022-09-20 17:02:17 +02:00
Ricardo Wurmus
a4f40ff0ba
gnu: r-effectsize: Update to 0.7.0.5. 
* gnu/packages/cran.scm (r-effectsize): Update to 0.7.0.5.
 2022-09-20 17:02:17 +02:00
Ricardo Wurmus
523f82ffd0
gnu: r-performance: Update to 0.9.2. 
* gnu/packages/cran.scm (r-performance): Update to 0.9.2.
 2022-09-20 17:02:17 +02:00
Ricardo Wurmus
12aba62c33
gnu: r-bayestestr: Update to 0.13.0. 
* gnu/packages/cran.scm (r-bayestestr): Update to 0.13.0.
 2022-09-20 17:02:17 +02:00
Ricardo Wurmus
e6dc7908cc
gnu: r-tmb: Update to 1.9.1. 
* gnu/packages/cran.scm (r-tmb): Update to 1.9.1.
 2022-09-20 17:02:17 +02:00
Ricardo Wurmus
4d1620474b
gnu: r-emmeans: Update to 1.8.1-1. 
* gnu/packages/cran.scm (r-emmeans): Update to 1.8.1-1.
 2022-09-20 17:02:16 +02:00
Ricardo Wurmus
4b4415a9d7
gnu: r-furrr: Update to 0.3.1. 
* gnu/packages/cran.scm (r-furrr): Update to 0.3.1.
 2022-09-20 17:02:16 +02:00
Ricardo Wurmus
5a5e52e919
gnu: r-mosaic: Update to 1.8.4. 
* gnu/packages/cran.scm (r-mosaic): Update to 1.8.4.
[propagated-inputs]: Remove r-broom, r-ggdendro, r-ggrepel, r-ggridges, r-ggstance,
r-glue, r-gridextra, r-latticeextra, r-leaflet, and r-readr; add
r-purrr.
 2022-09-20 17:02:16 +02:00
Ricardo Wurmus
eb148988b0
gnu: r-raster: Update to 3.6-3. 
* gnu/packages/cran.scm (r-raster): Update to 3.6-3.
 2022-09-20 17:02:16 +02:00
Ricardo Wurmus
f9e5d17bb4
gnu: r-mosaicdata: Update to 0.20.3. 
* gnu/packages/cran.scm (r-mosaicdata): Update to 0.20.3.
 2022-09-20 17:02:16 +02:00
Ricardo Wurmus
923bc62935
gnu: r-ggformula: Update to 0.10.2. 
* gnu/packages/cran.scm (r-ggformula): Update to 0.10.2.
 2022-09-20 17:02:16 +02:00
Ricardo Wurmus
784a5d05fe
gnu: r-labelled: Update to 2.10.0. 
* gnu/packages/cran.scm (r-labelled): Update to 2.10.0.
 2022-09-20 17:02:16 +02:00
Ricardo Wurmus
fb403a147b
gnu: r-mosaiccore: Update to 0.9.2. 
* gnu/packages/cran.scm (r-mosaiccore): Update to 0.9.2.
 2022-09-20 17:02:16 +02:00
Ricardo Wurmus
143b69422a
gnu: r-abcrf: Update to 1.9. 
* gnu/packages/cran.scm (r-abcrf): Update to 1.9.
 2022-09-20 17:02:15 +02:00
Ricardo Wurmus
3d307748c7
gnu: r-flextable: Update to 0.8.0. 
* gnu/packages/cran.scm (r-flextable): Update to 0.8.0.
 2022-09-20 17:02:15 +02:00
Ricardo Wurmus
567af5689f
gnu: r-insight: Update to 0.18.3. 
* gnu/packages/cran.scm (r-insight): Update to 0.18.3.
 2022-09-20 17:02:15 +02:00
Ricardo Wurmus
d7e46a3b9a
gnu: r-officer: Update to 0.4.4. 
* gnu/packages/cran.scm (r-officer): Update to 0.4.4.
 2022-09-20 17:02:15 +02:00
Ricardo Wurmus
cb9d49c18d
gnu: r-rbibutils: Update to 2.2.9. 
* gnu/packages/cran.scm (r-rbibutils): Update to 2.2.9.
 2022-09-20 17:02:15 +02:00
Ricardo Wurmus
acc4256ccb
gnu: r-hdf5r: Update to 1.3.6. 
* gnu/packages/cran.scm (r-hdf5r): Update to 1.3.6.
 2022-09-20 17:02:15 +02:00
Ricardo Wurmus
4a3cc52d9c
gnu: r-factominer: Update to 2.6. 
* gnu/packages/cran.scm (r-factominer): Update to 2.6.
[propagated-inputs]: Add r-emmeans and r-multcompview.
 2022-09-20 17:02:15 +02:00
Ricardo Wurmus
ffd7c3890a
gnu: r-reticulate: Update to 1.26. 
* gnu/packages/cran.scm (r-reticulate): Update to 1.26.
 2022-09-20 17:02:15 +02:00
Ricardo Wurmus
8c381850af
gnu: r-dtplyr: Update to 1.2.2. 
* gnu/packages/cran.scm (r-dtplyr): Update to 1.2.2.
 2022-09-20 17:02:15 +02:00
Ricardo Wurmus
de2564a2b2
gnu: r-zip: Update to 2.2.1. 
* gnu/packages/cran.scm (r-zip): Update to 2.2.1.
 2022-09-20 17:02:14 +02:00
Ricardo Wurmus
6e03a26f2c
gnu: r-arules: Update to 1.7-4. 
* gnu/packages/cran.scm (r-arules): Update to 1.7-4.
 2022-09-20 17:02:14 +02:00
Ricardo Wurmus
9ef90c6d34
gnu: r-vim: Update to 6.2.2. 
* gnu/packages/cran.scm (r-vim): Update to 6.2.2.
 2022-09-20 17:02:14 +02:00
Ricardo Wurmus
b475e4b381
gnu: r-radiant-data: Update to 1.4.5. 
* gnu/packages/cran.scm (r-radiant-data): Update to 1.4.5.
 2022-09-20 17:02:14 +02:00
Ricardo Wurmus
29f9945039
gnu: r-np: Update to 0.60-14. 
* gnu/packages/cran.scm (r-np): Update to 0.60-14.
 2022-09-20 17:02:14 +02:00
Ricardo Wurmus
ff9b9f6001
gnu: r-cubature: Update to 2.0.4.5. 
* gnu/packages/cran.scm (r-cubature): Update to 2.0.4.5.
 2022-09-20 17:02:14 +02:00
Ricardo Wurmus
57df402147
gnu: r-urca: Update to 1.3-3. 
* gnu/packages/cran.scm (r-urca): Update to 1.3-3.
 2022-09-20 17:02:14 +02:00
Ricardo Wurmus
4905326be2
gnu: r-statnet-common: Update to 4.7.0. 
* gnu/packages/cran.scm (r-statnet-common): Update to 4.7.0.
 2022-09-20 17:02:14 +02:00
Ricardo Wurmus
b58685a375
gnu: r-tinytex: Update to 0.41. 
* gnu/packages/cran.scm (r-tinytex): Update to 0.41.
 2022-09-20 17:02:13 +02:00
Ricardo Wurmus
c0f7048daa
gnu: r-pillar: Update to 1.8.1. 
* gnu/packages/cran.scm (r-pillar): Update to 1.8.1.
 2022-09-20 17:02:13 +02:00
Ricardo Wurmus
8ce03b223a
gnu: r-xfun: Update to 0.33. 
* gnu/packages/cran.scm (r-xfun): Update to 0.33.
 2022-09-20 17:02:13 +02:00
Ricardo Wurmus
4acecac456
gnu: r-cli: Update to 3.4.0. 
* gnu/packages/cran.scm (r-cli): Update to 3.4.0.
[propagated-inputs]: Remove r-glue.
 2022-09-20 17:02:13 +02:00
Ricardo Wurmus
bbbc036b09
gnu: r-scatterplot3d: Update to 0.3-42. 
* gnu/packages/cran.scm (r-scatterplot3d): Update to 0.3-42.
 2022-09-20 17:02:13 +02:00
Ricardo Wurmus
2313441cea
gnu: r-jomo: Update to 2.7-4. 
* gnu/packages/cran.scm (r-jomo): Update to 2.7-4.
 2022-09-20 17:02:13 +02:00
Ricardo Wurmus
fedc98021e
gnu: r-broom: Update to 1.0.1. 
* gnu/packages/cran.scm (r-broom): Update to 1.0.1.
 2022-09-20 17:02:13 +02:00
Ricardo Wurmus
fc802d489a
gnu: r-progressr: Update to 0.11.0. 
* gnu/packages/cran.scm (r-progressr): Update to 0.11.0.
 2022-09-20 17:02:13 +02:00
Ricardo Wurmus
3b389cccff
gnu: r-lpsolve: Update to 5.6.16. 
* gnu/packages/cran.scm (r-lpsolve): Update to 5.6.16.
 2022-09-20 17:02:12 +02:00
Ricardo Wurmus
c212709262
gnu: r-restrserve: Update to 1.2.1. 
* gnu/packages/cran.scm (r-restrserve): Update to 1.2.1.
 2022-09-20 17:02:12 +02:00
Ricardo Wurmus
69f2a535e2
gnu: r-prismatic: Update to 1.1.1. 
* gnu/packages/cran.scm (r-prismatic): Update to 1.1.1.
 2022-09-20 17:02:12 +02:00
Ricardo Wurmus
2d013e0e99
gnu: r-palmerpenguins: Update to 0.1.1. 
* gnu/packages/cran.scm (r-palmerpenguins): Update to 0.1.1.
 2022-09-20 17:02:12 +02:00
Ricardo Wurmus
2b261d2c0a
gnu: r-paletteer: Update to 1.4.1. 
* gnu/packages/cran.scm (r-paletteer): Update to 1.4.1.
 2022-09-20 17:02:12 +02:00
Ricardo Wurmus
9849c6d77d
gnu: r-haven: Update to 2.5.1. 
* gnu/packages/cran.scm (r-haven): Update to 2.5.1.
 2022-09-20 17:02:12 +02:00
Ricardo Wurmus
c486b129fa
gnu: r-shinyfiles: Update to 0.9.3. 
* gnu/packages/cran.scm (r-shinyfiles): Update to 0.9.3.
 2022-09-20 17:02:12 +02:00
Ricardo Wurmus
22d4155e73
gnu: r-modelr: Update to 0.1.9. 
* gnu/packages/cran.scm (r-modelr): Update to 0.1.9.
 2022-09-20 17:02:12 +02:00
Ricardo Wurmus
5897c7b6f2
gnu: r-readxl: Update to 1.4.1. 
* gnu/packages/cran.scm (r-readxl): Update to 1.4.1.
 2022-09-20 17:02:11 +02:00
Ricardo Wurmus
056f8eed57
gnu: r-callr: Update to 3.7.2. 
* gnu/packages/cran.scm (r-callr): Update to 3.7.2.
 2022-09-20 17:02:11 +02:00
Ricardo Wurmus
b09ba421ef
gnu: r-reprex: Update to 2.0.2. 
* gnu/packages/cran.scm (r-reprex): Update to 2.0.2.
[propagated-inputs]: Add r-lifecycle.
 2022-09-20 17:02:11 +02:00
Ricardo Wurmus
cd6b82cdd8
gnu: r-rvest: Update to 1.0.3. 
* gnu/packages/cran.scm (r-rvest): Update to 1.0.3.
[propagated-inputs]: Add r-cli, r-glue, and r-withr.
 2022-09-20 17:02:11 +02:00
Ricardo Wurmus
4611b0676c
gnu: r-astsa: Update to 1.16. 
* gnu/packages/cran.scm (r-astsa): Update to 1.16.
 2022-09-20 17:02:11 +02:00
Ricardo Wurmus
120dd1c0e2
gnu: r-poorman: Update to 0.2.6. 
* gnu/packages/cran.scm (r-poorman): Update to 0.2.6.
 2022-09-20 17:02:11 +02:00
Ricardo Wurmus
786c64fd82
gnu: r-scales: Update to 1.2.1. 
* gnu/packages/cran.scm (r-scales): Update to 1.2.1.
 2022-09-20 17:02:11 +02:00
Ricardo Wurmus
df7f9236ee
gnu: r-ggpmisc: Update to 0.5.0. 
* gnu/packages/cran.scm (r-ggpmisc): Update to 0.5.0.
[propagated-inputs]: Add r-confintr.
 2022-09-20 17:02:10 +02:00
Ricardo Wurmus
11669e8ee4
gnu: r-ggvenndiagram: Update to 1.2.2. 
* gnu/packages/cran.scm (r-ggvenndiagram): Update to 1.2.2.
[propagated-inputs]: Remove r-stringr; add r-yulab-utils.
 2022-09-20 17:02:10 +02:00
Ricardo Wurmus
0fb5a1bd2f
gnu: r-zoo: Update to 1.8-11. 
* gnu/packages/cran.scm (r-zoo): Update to 1.8-11.
 2022-09-20 17:02:10 +02:00
Ricardo Wurmus
af257e509d
gnu: r-babelwhale: Update to 1.1.0. 
* gnu/packages/cran.scm (r-babelwhale): Update to 1.1.0.
[propagated-inputs]: Add r-digest, r-fs, and r-glue.
 2022-09-20 17:02:10 +02:00
Ricardo Wurmus
9878daa19d
gnu: r-rticles: Update to 0.24. 
* gnu/packages/cran.scm (r-rticles): Update to 0.24.
 2022-09-20 17:02:10 +02:00
Ricardo Wurmus
ae4a57b967
gnu: r-googlesheets4: Update to 1.0.1. 
* gnu/packages/cran.scm (r-googlesheets4): Update to 1.0.1.
 2022-09-20 17:02:10 +02:00
Ricardo Wurmus
5ba2bda97c
gnu: r-dixontest: Update to 1.0.4. 
* gnu/packages/cran.scm (r-dixontest): Update to 1.0.4.
 2022-09-20 17:02:10 +02:00
Ricardo Wurmus
6e052e0b7c
gnu: r-datawizard: Update to 0.6.0. 
* gnu/packages/cran.scm (r-datawizard): Update to 0.6.0.
 2022-09-20 17:02:10 +02:00
Ricardo Wurmus
93328f8b89
gnu: r-activedriverwgs: Update to 1.2.0. 
* gnu/packages/bioconductor.scm (r-activedriverwgs): Update to 1.2.0.
 2022-09-20 17:02:09 +02:00
Ricardo Wurmus
8f3787576c
gnu: r-htscluster: Update to 2.0.10. 
* gnu/packages/bioconductor.scm (r-htscluster): Update to 2.0.10.
 2022-09-20 17:02:09 +02:00
Ricardo Wurmus
b1dd1f221f
gnu: r-perfmeas: Update to 1.2.5. 
* gnu/packages/bioconductor.scm (r-perfmeas): Update to 1.2.5.
 2022-09-20 17:02:09 +02:00
Ricardo Wurmus
9c91113ee7
gnu: r-valr: Update to 0.6.5. 
* gnu/packages/bioconductor.scm (r-valr): Update to 0.6.5.
 2022-09-20 17:02:09 +02:00
Ricardo Wurmus
1e3d01dd05
gnu: r-httpuv: Update to 1.6.6. 
* gnu/packages/patches/r-httpuv-1.5.5-unvendor-libuv.patch: Replace this patch...
* gnu/packages/patches/r-httpuv-1.6.6-unvendor-libuv.patch: ...with this.
* gnu/local.mk (dist_patch_DATA): Update patch file.
* gnu/packages/cran.scm (r-httpuv): Update to 1.6.6.
[source]: Update patch.
 2022-09-20 17:02:09 +02:00
Ricardo Wurmus
7da529c577
gnu: r-dt: Update to 0.25. 
* gnu/packages/statistics.scm (r-dt): Update to 0.25; update jszip to 3.10.1.
 2022-09-20 17:02:09 +02:00
Ricardo Wurmus
921ac834db
gnu: r-torch: Update to 0.8.1. 
* gnu/packages/cran.scm (r-torch): Update to 0.8.1.
 2022-09-20 17:02:09 +02:00
Ricardo Wurmus
8e321254c0
gnu: r-torch: Do not hardcode Python version. 
* gnu/packages/cran.scm (r-torch)[arguments]: Do not hardcode Python version 3.9.
 2022-09-20 17:02:09 +02:00
Ricardo Wurmus
2b39d85ac4
gnu: liblantern: Update to 0.8.1. 
* gnu/packages/machine-learning.scm (liblantern): Update to 0.8.1.
 2022-09-20 17:02:09 +02:00
Ricardo Wurmus
7531efe54d
gnu: liblantern: Do not hardcode Python version. 
* gnu/packages/machine-learning.scm (liblantern)[arguments]: Do not hardcode
Python version.
 2022-09-20 17:02:09 +02:00
Ricardo Wurmus
851441a5d9
gnu: r-arrow: Update to 9.0.0.1. 
* gnu/packages/cran.scm (r-arrow): Update to 9.0.0.1.
 2022-09-20 17:02:08 +02:00
Ricardo Wurmus
e5e5b2a15a
gnu: apache-arrow: Update to 9.0.0. 
* gnu/packages/databases.scm (apache-arrow): Update to 9.0.0.
 2022-09-20 17:02:08 +02:00
Ricardo Wurmus
71d87df8bf
gnu: r-rintrojs: Update to 0.3.2. 
* gnu/packages/cran.scm (r-rintrojs): Update to 0.3.2.
 2022-09-20 17:02:08 +02:00
Ricardo Wurmus
487fb5f624
gnu: Add r-confintr. 
* gnu/packages/cran.scm (r-confintr): New variable.
 2022-09-20 17:02:08 +02:00
Ricardo Wurmus
9e589ca6e3
gnu: rust-sprs-0.10: Inherit from rust-sprs-0.11. 
* gnu/packages/crates-io.scm (rust-sprs-0.10): Inherit from rust-sprs-0.11.
 2022-09-20 17:01:55 +02:00
Ricardo Wurmus
4d4e2a9444
gnu: Add rust-sprs-0.11. 
* gnu/packages/crates-io.scm (rust-sprs-0.11): New variable.
 2022-09-20 17:01:55 +02:00
Ricardo Wurmus
f5483e2661
gnu: Add rust-sprs-0.10. 
* gnu/packages/crates-io.scm (rust-sprs-0.10): New variable.
 2022-09-20 17:01:55 +02:00
Ricardo Wurmus
76e6459722
gnu: Add rust-tobj-2. 
* gnu/packages/crates-io.scm (rust-tobj-2): New variable.
 2022-09-20 17:01:54 +02:00
Ricardo Wurmus
cef61a0e69
gnu: Add rust-tobj-3. 
* gnu/packages/crates-io.scm (rust-tobj-3): New variable.
 2022-09-20 17:01:54 +02:00
Ricardo Wurmus
c311c88122
gnu: Add rust-linecount-0.1. 
* gnu/packages/crates-io.scm (rust-linecount-0.1): New variable.
 2022-09-20 17:01:54 +02:00
Mark H Weaver
4e88a7bfcb
gnu: icecat: Update to 102.3.0-guix0-preview1 [security fixes]. 
Includes fixes for CVE-2022-40956, CVE-2022-40957, CVE-2022-40958,
CVE-2022-40959, CVE-2022-40960, and CVE-2022-40962.

Partly based on earlier work by:
  Jonathan Brielmaier <jonathan.brielmaier@web.de>
  John Kehayias <john.kehayias@protonmail.com>
  Pierre Langlois <pierre.langlois@gmx.com>
  Clement Lassieur <clement@lassieur.org>

* gnu/packages/gnuzilla.scm (all-mozilla-locales)
(%icecat-version, %icecat-build-id): Update.
(icecat-source): Update upstream source hash.  Update to latest
gnuzilla commit.  Remove the code that previously applied
"icecat-use-older-reveal-hidden-html.patch".
(icecat)[inputs]: Use icu4c-71.
[native-inputs]: Use rust-1.59.  Use the default llvm and clang.
[arguments]: Add "--without-wasm-sandboxed-libraries" to the configure
flags.  Add 'remove-cargo-frozen-flag' phase.  In the 'configure'
phase, set the "MACH_BUILD_PYTHON_NATIVE_PACKAGE_SOURCE",
"GUIX_PYTHONPATH", and "MOZBUILD_STATE_PATH" environment variables.
Remove the code that previously set the "MACH_USE_SYSTEM_PYTHON" and
"MOZ_NOSPAM" environment variables.  In the 'install-desktop-entry'
phase, add "StartupWMClass=Navigator" to the desktop file.
[description]: "IceCat 91" --> "IceCat 102".
(all-mozilla-91-locales, %icecat-91-version, icecat-91-source): New
variables bound to the old values, for use by icedove.
(icedove)[source]: Ues 'icecat-91-source'.
 2022-09-20 10:40:41 -04:00
Mark H Weaver
9b0ec71df5
gnu: Add rust-cbindgen-0.23 and its dependencies to gnuzilla.scm. 
This will be needed to build IceCat 102.

* gnu/packages/gnuzilla.scm (rust-textwrap-0.15-promise)
(rust-clap-lex-0.2, rust-clap-derive-3.2.15-promise)
(rust-clap-3.2.16-promise, rust-cbindgen-0.24-promise)
(rust-cbindgen-0.23-promise): New variables.

Based on work by: John Kehayias <john.kehayias@protonmail.com>.
 2022-09-20 10:39:57 -04:00
Mark H Weaver
c6b9bf0da2
gnu: Add rust-1.59 to gnuzilla.scm. 
This will be needed to build IceCat 102.

* gnu/packages/gnuzilla.scm (rust-1.58-promise, rust-1.59-promise):
New variables.
 2022-09-20 10:39:41 -04:00
Efraim Flashner
f6e2ca3651
gnu: vim: Update to 9.0.0509. 
* gnu/packages/vim.scm (vim): Update to 9.0.0509.
[arguments]: Adjust custom 'patch-absolute-paths phase to adjust
substitutions.
 2022-09-20 14:17:17 +03:00
Efraim Flashner
6a2f735983
gnu: tree: Use https. 
* gnu/packages/admin.scm (tree)[source]: Use https.
[home-page]: Same.
 2022-09-20 13:57:57 +03:00
Efraim Flashner
00537ec17d
gnu: tree: Update to 2.0.4. 
* gnu/packages/admin.scm (tree): Update to 2.0.4.
[arguments]: Add phase to fix the version string in the man page.
 2022-09-20 13:57:22 +03:00
Efraim Flashner
5a9e3b7c39
gnu: cross: Add default configure-flags. 
Reported by Arun Isaac <arunisaac@systemreboot.net>.

* gnu/packages/cross-base.scm (cross)[arguments]: Add a default for
configure-flags so '--target=' is always added.
 2022-09-20 11:26:12 +03:00
Trevor Richards
4248fe076e
gnu: Add sbcl-stumpwm-pamixer. 
* gnu/packages/wm.scm (sbcl-stumpwm-pamixer): New variable.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2022-09-20 09:15:44 +02:00
Liliana Marie Prikler
e58bafcca4
gnu: evolution: Update to 3.46.0. 
* gnu/packages/gnome.scm (evolution): Update to 3.46.0.
 2022-09-19 21:13:39 +02:00
Liliana Marie Prikler
d753a528ce
gnu: evolution-data-server: Update to 3.46.0. 
* gnu/packages/gnome.scm (evolution-data-server): Update to 3.46.0.
 2022-09-19 21:13:31 +02:00
Liliana Marie Prikler
96c7887864
gnu: gnome-todo: Update to "Endeavour" 42.0. 
* gnu/packages/gnome.scm (gnome-todo): Deprecate and rename to...
(endeavour): ... this.
[source]: Use git origin.
* gnu/packages/patches/gnome-todo-libportal.patch: Deleted file.
* gnu/local.mk (dist_patch_DATA): Update accordingly.
 2022-09-19 20:51:13 +02:00
Artyom V. Poptsov
72fe3c0a35
gnu: Add java-argparse4j. 
* gnu/packages/java.scm (java-argparse4j): New variable.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2022-09-19 15:43:28 +02:00
Nicolas Goaziou
d845326b5c
Revert "gnu: Add emacs-org-roam-ui." 
This reverts commit 1225fe013e.

The package includes minified Javascript. See
<https://issues.guix.gnu.org/issue/57891>.
 2022-09-19 12:19:53 +02:00
jgart
4ca4b96e2a
gnu: Add cl-bubble-operator-upwards. 
* gnu/packages/lisp-xyz.scm (cl-bubble-operator-upwards,
  ecl-bubble-operator-upwards, sbcl-bubble-operator-upwards): New variables.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2022-09-19 11:11:56 +02:00
Efraim Flashner
f9ada7fdc4
gnu: connman: Patch CVE-2022-32392, CVE-2022-32293. 
* gnu/packages/connman.scm (connman)[source]: Add patches.
* gnu/packages/patches/connman-CVE-2022-32292.patch,
gnu/packages/patches/connman-CVE-2022-32293-pt1.patch,
gnu/packages/patches/connman-CVE-2022-32293-pt1.patch: New files.
* gnu/local.mk (dist_patch_DATA): Register them.
 2022-09-19 11:19:49 +03:00
Efraim Flashner
90e316535a
gnu: enlightenment: Update to 0.25.4. 
* gnu/packages/enlightenment.scm (enlightenment): Update to 0.25.4.
 2022-09-19 11:12:44 +03:00
Efraim Flashner
7416ad2cda
gnu: efl: Update to 1.26.3. 
* gnu/packages/enlightenment.scm (efl): Update to 1.26.3.
 2022-09-19 11:12:41 +03:00
Efraim Flashner
c46a96fe33
gnu: luajit: Remove riscv64-linux from supported-systems. 
* gnu/packages/lua.scm (luajit)[supported-systems]: Remove riscv64-linux
from the supported-systems.
 2022-09-19 10:25:05 +03:00
Olivier Dion
021b2dd0ae
gnu: lttng-tools: Update to 2.13.8. 
* gnu/packages/instrumentation.scm (lttng-tools): Update to 2.13.8.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
 2022-09-19 09:07:18 +02:00
Olivier Dion
6e47d9f6f4
gnu: lttng-ust: Update to 2.13.4. 
* gnu/packages/instrumentation.scm (lttng-ust): Update to 2.13.4.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
 2022-09-19 09:07:18 +02:00
Olivier Dion
013545cc84
gnu: lttng-modules: Update to 2.13.5. 
* gnu/packages/instrumentation.scm (lttng-modules): Update to 2.13.5.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
 2022-09-19 09:07:18 +02:00
Andrew Tropin
f7565101e4
gnu: emacs-next-pgtk: Inherit patches from emacs-next. 
* gnu/packages/emacs.scm (emacs-next-pgtk)[source]: Inherit patches from
emacs-next.
 2022-09-19 07:23:41 +03:00
Arun Isaac
25adb336bc
gnu: font-ibm-plex: Update to 6.1.1. 
* gnu/packages/fonts.scm (font-ibm-plex): Update to 6.1.1.
 2022-09-19 03:10:55 +05:30
Nicolas Goaziou
31a56967e2
gnu: hyperrogue: Update to 12.1a. 
* gnu/packages/games.scm (hyperrogue): Update to 12.1a.
[source]<origin>: Set upstream to GitHub.
[arguments]: Use G-expressions.
<phases>: Remove INSTALL-DATA phase. Remove trailing #T.
[home-page]: Fix URL.
 2022-09-18 19:56:20 +02:00
Liliana Marie Prikler
1066a424dc
gnu: gnome-shell-extension-noannoyance: Update to 16-1-b759d10f. 
* gnu/packages/gnome-xyz.scm (gnome-shell-extension-noannoyance): Update to
16-1-b759d10f.
 2022-09-18 19:19:42 +02:00
Liliana Marie Prikler
9866065714
gnu: gnome-shell-extension-burn-my-windows: Update to 21. 
* gnu/packages/gnome-xyz.scm (gnome-shell-extension-burn-my-windows): Update to 21.
 2022-09-18 19:18:20 +02:00
Liliana Marie Prikler
ab565f1e54
gnu: gnome-shell-extension-vertical-overview: Update to 9. 
* gnu/packages/gnome-xyz.scm (gnome-shell-extension-vertical-overview): Update to 9.
 2022-09-18 19:18:20 +02:00
Liliana Marie Prikler
f129ef1000
gnu: gnome-shell-extension-dash-to-panel: Update to 51. 
* gnu/packages/gnome-xyz.scm (gnome-shell-extension-dash-to-panel): Update to 51.
 2022-09-18 19:18:20 +02:00
Liliana Marie Prikler
6cf9478d01
gnu: gnome-shell-extension-just-perfection: Update to 22.0. 
* gnu/packages/gnome-xyz.scm (gnome-shell-extension-just-perfection): Update to 22.0.
 2022-09-18 19:18:20 +02:00
Liliana Marie Prikler
26ea91f797
gnu: gnome-shell-extension-dash-to-dock: Update to 73. 
* gnu/packages/gnome-xyz.scm (gnome-shell-extension-dash-to-dock): Update to 73.
 2022-09-18 19:18:20 +02:00
Guillaume Le Vaillant
e775b99d45
gnu: txr: Update to 282. 
* gnu/packages/lisp.scm (txr): Update to 282.
 2022-09-18 18:52:28 +02:00
Guillaume Le Vaillant
5a930bbffc
gnu: eisl: Update to 2.63. 
* gnu/packages/lisp.scm (eisl): Update to 2.63.
 2022-09-18 18:52:28 +02:00
Julien Lepiller
7934b12ca5
gnu: ocaml-lwt-log: Update to 1.1.2. 
* gnu/packages/ocaml.scm (ocaml-lwt-log): Update to 1.1.2.
 2022-09-18 18:47:57 +02:00
Marius Bakke
ce3b51a4c6
gnu: python-pandas: Update to 1.4.4. 
* gnu/packages/python-science.scm (python-pandas): Update to 1.4.4.
[native-inputs]: Change from PYTHON-CYTHON to PYTHON-CYTHON-0.29.32.
 2022-09-18 16:18:36 +02:00
Marius Bakke
08124aa8d6
gnu: python-cython: Add 0.29.32. 
* gnu/packages/python-xyz.scm (python-cython-0.29.32): New variable.
 2022-09-18 16:18:35 +02:00
Marius Bakke
94827144d1
gnu: gnome-settings-daemon: Add NSS on RUNPATH. 
* gnu/packages/gnome.scm (gnome-settings-daemon)[arguments]: Ensure NSS ends
up on RUNPATH.
 2022-09-18 16:18:35 +02:00
Marius Bakke
2104efcddf
gnu: Explicitly use OpenSSL 1.1 in packages that don't support 3.0. 
* gnu/packages/php.scm (php)[inputs]: Change from OPENSSL to OPENSSL-1.1.
* gnu/packages/ntp.scm (ntp)[inputs]: Likewise.
 2022-09-18 16:18:35 +02:00
Marius Bakke
5010801676
gnu: Explicitly use meson@0.60 in packages that don't support 0.63. 
* gnu/packages/gnome.scm (gnome-disk-utility, gnome-screenshot,
dconf-editor)[arguments]: Add #:meson.
 2022-09-18 16:18:34 +02:00
Marius Bakke
6c3ccc6b1f
gnu: python-ufo2ft: Don't use pytest-runner. 
pytest-runner is deprecated and does not work properly with the newer
setuptools in Python 3.10 for this package.

* gnu/packages/fontutils.scm (python-ufo2ft)[arguments]: Override check
phase.
[native-inputs]: Remove PYTHON-PYTEST-RUNNER.
 2022-09-18 16:18:34 +02:00
Liliana Marie Prikler
5811d876c3
gnu: polari: Add missing input. 
* gnu/packages/gnome.scm (polari)[inputs]: Add libadwaita.
 2022-09-18 16:03:22 +02:00
Liliana Marie Prikler
d98542a6a9
gnu: Add missing emacs-polymode patch. 
This fixes up commit 52e55b38f4.

* gnu/packages/patches/emacs-polymode-fix-lexical-variable-error.patch:
New file.
 2022-09-18 16:03:22 +02:00
Liliana Marie Prikler
9a4ea7059d
gnu: gitg: Use gtksourceview-4. 
* gnu/packages/gnome.scm (gitg)[inputs]: Replace gtksourceview with
gtksourceview-4.
 2022-09-18 16:03:21 +02:00
r0man
24278280ca
gnu: Add emacs-sqlite3-api. 
* gnu/packages/emacs-xyz.scm (emacs-sqlite3-api): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2022-09-18 14:42:26 +02:00
Hilton Chain
52e55b38f4
gnu: emacs-polymode: Add patch for native compilation. 
* gnu/packages/emacs-xyz.scm (emacs-polymode)[source]: Add patch.
* gnu/packages/patches/emacs-polymode-fix-lexical-variable-error.patch:
New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2022-09-18 14:16:08 +02:00
Nicolas Goaziou
e63f7d8086
gnu: asymptote: Update to 2.83. 
* gnu/packages/plotutils.scm (asymptote): Update to 2.83.
 2022-09-18 13:28:41 +02:00
Fredrik Salomonsson
373731737f
gnu: Add emacs-emprise. 
* gnu/packages/emacs-xyz.scm (emacs-emprise): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2022-09-18 11:14:54 +02:00
Fredrik Salomonsson
065b135ee1
gnu: Add emacs-suneater-theme. 
* gnu/packages/emacs-xyz.scm (emacs-suneater-theme): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2022-09-18 11:11:26 +02:00
Fredrik Salomonsson
1225fe013e
gnu: Add emacs-org-roam-ui. 
* gnu/packages/emacs-xyz.scm (emacs-org-roam-ui): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2022-09-18 11:09:50 +02:00
Nicolas Graves via Guix-patches via
90174c77cf
gnu: Add emacs-app-launcher. 
* gnu/packages/emacs-xyz.scm (emacs-app-launcher): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2022-09-18 11:06:23 +02:00
Nicolas Graves via Guix-patches via
ee58eab7d5
gnu: Add emacs-orca. 
* gnu/packages/emacs-xyz.scm (emacs-orca): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2022-09-18 11:06:23 +02:00
Trevor Richards
ba189bdc7a
gnu: Add emacs-transpose-mark. 
* gnu/packages/emacs-xyz.scm (emacs-transpose-mark): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2022-09-18 11:02:00 +02:00
Nicolas Goaziou
ee0768c792
gnu: emacs-parsebib: Update to 4.3. 
* gnu/packages/emacs-xyz.scm (emacs-parsebib): Update to 4.3.
 2022-09-17 23:04:13 +02:00
Nicolas Goaziou
64c49de49e
gnu: emacs-logview: Update to 0.15.1. 
* gnu/packages/emacs-xyz.scm (emacs-logview): Update to 0.15.1.
 2022-09-17 23:04:13 +02:00
Leo Famulari
75c3257c1f
gnu: linux-libre 4.9: Update to 4.9.328. 
* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.328.
(linux-libre-4.9-pristine-source): Update hash.
 2022-09-17 14:32:47 -04:00
Leo Famulari
ffef8e69ac
gnu: linux-libre 4.14: Update to 4.14.293. 
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.293.
(linux-libre-4.14-pristine-source): Update hash.
 2022-09-17 14:32:47 -04:00
Leo Famulari
04643c276f
gnu: linux-libre 4.19: Update to 4.19.258. 
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.258.
(linux-libre-4.19-pristine-source): Update hash.
 2022-09-17 14:32:46 -04:00
Leo Famulari
75c77caa1a
gnu: linux-libre 5.4: Update to 5.4.213. 
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.213.
(linux-libre-5.4-pristine-source): Update hash.
 2022-09-17 14:32:46 -04:00
Leo Famulari
cf6bd972a4
gnu: linux-libre 5.10: Update to 5.10.143. 
* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.143.
(linux-libre-5.10-pristine-source): Update hash.
 2022-09-17 14:32:46 -04:00
Leo Famulari
eba98e68e6
gnu: linux-libre 5.15: Update to 5.15.68. 
* gnu/packages/linux.scm (linux-libre-5.15-version): Update to 5.15.68.
(linux-libre-5.15-pristine-source, deblob-scripts-5.15): Update hashes.
 2022-09-17 14:32:46 -04:00
Leo Famulari
620ca30134
gnu: linux-libre 5.19: Update to 5.19.9. 
* gnu/packages/linux.scm (linux-libre-5.19-version): Update to 5.19.9.
(linux-libre-5.19-pristine-source, deblob-scripts-5.19): Update hashes.
 2022-09-17 14:32:42 -04:00
Paul A. Patience
c00e1c87f2
gnu: vtk: Use system libHaru. 
* gnu/packages/image-processing.scm (vtk)[snippet]: Delete bundled
libHaru and patch VTK for newer libHaru. Reindent and remove trailing
boolean.
[arguments]: Specify external libHaru in configure flags.
[inputs]: Add libharu.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2022-09-17 19:09:45 +02:00
Paul A. Patience
229425fa53
gnu: saga: Fix build with newer libHaru. 
* gnu/packages/geo.scm (saga)[modules, snippet]: New fields.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2022-09-17 19:09:45 +02:00
Paul A. Patience
140a08d44a
gnu: libharu: Update to 2.4.2. 
* gnu/packages/pdf.scm (libharu): Update to 2.4.2.
[build-system]: Switch to cmake-build-system.
[arguments]: Remove #:configure-flags, add #:tests? and #:phases.
[inputs]: Sort them.
[native-inputs]: Remove.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2022-09-17 19:09:45 +02:00
Raghav Gururajan
c54ef97c80
gnu: gajim: Fix gtksourceview dependency. 
* gnu/packages/messaging.scm (gajim)[inputs]: Use gtksourceview-4.
 2022-09-17 11:22:41 -04:00
Raghav Gururajan
f2327f0b2e
gnu: gajim: Remove inputs labels. 
* gnu/packages/messaging.scm (gajim): Remove input labels.
 2022-09-17 11:19:02 -04:00
Nicolas Goaziou
e8fac28b9b
gnu: emacs-transpose-frame: Update to 0.2.1. 
* gnu/packages/emacs-xyz.scm (emacs-transpose-frame): Update to 0.2.1.
 2022-09-16 21:10:15 +02:00
Nicolas Goaziou
4ce19aa086
gnu: emacs-setup: Update to 1.3.1. 
* gnu/packages/emacs-xyz.scm (emacs-setup): Update to 1.3.1.
 2022-09-16 21:10:14 +02:00
Nicolas Goaziou
3e2760cfca
gnu: emacs-xref: Update to 1.5.1. 
* gnu/packages/emacs-xyz.scm (emacs-xref): Update to 1.5.1.
 2022-09-16 21:10:14 +02:00
Nicolas Goaziou
5dec2059c8
gnu: emacs-persist: Update to 0.5. 
* gnu/packages/emacs-xyz.scm (emacs-persist): Update to 0.5.
 2022-09-16 21:10:14 +02:00
Nicolas Goaziou
eaad411a7b
gnu: emacs-subed: Update to 1.0.9. 
* gnu/packages/emacs-xyz.scm (emacs-subed): Update to 1.0.9.
 2022-09-16 21:10:13 +02:00
Nicolas Goaziou
abdc2e15ba
gnu: emacs-move-text: Update to 2.0.10. 
* gnu/packages/emacs-xyz.scm (emacs-move-text): Update to 2.0.10.
 2022-09-16 21:10:13 +02:00
Nicolas Goaziou
9286e34009
gnu: emacs-ement: Update to 0.1.4. 
* gnu/packages/emacs-xyz.scm (emacs-ement): Update to 0.1.4.
 2022-09-16 21:10:07 +02:00
Andrew Tropin
77e768ac4e
gnu: emacs-next-pgtk: Fix super key problem. 
Recent version of emacs 29 with pgtk flag has a problem with handling super
key modifier, due to gtk bug: https://gitlab.gnome.org/GNOME/gtk/-/issues/4913
This commit workarounds it.

* gnu/packages/patches/emacs-pgtk-super-key-fix.patch: New file.
* gnu/packages/emacs.scm (emacs-next-pgtk): Use it here.
* gnu/local.mk (dist_patch_DATA): Register it here.
 2022-09-16 20:28:34 +03:00
Marius Bakke
888dfc8eb6
gnu: python-scipy: Update to 1.9.1. 
* gnu/packages/python-science.scm (python-scipy): Update to 1.9.1.
[source]: Switch to GIT-FETCH.
[outputs]: Remove.
[arguments]: Don't disable Pythran.  Don't configure OpenBLAS which is now
discovered by pkg-config.  Do a "manual" PEP 517 style build.  Make
install-doc phase conditional on the presence of Sphinx.  Simplify tests.
[propagated-inputs]: Add PYTHON-PYTHRAN.
[native-inputs]: Remove PERL, WHICH, PYTHON-NUMPYDOC,
PYTHON-PYDATA-SPHINX-THEME, PYTHON-SPHINX, and PYTHON-SPHINX-PANELS.  Add
GCC, PKG-CONFIG, PYTHON-PYPA-BUILD and PYTHON-MESON.
 2022-09-16 18:42:21 +02:00
Marius Bakke
44d73b3370
gnu: Add meson-python. 
* gnu/packages/build-tools.scm (meson-python): New variable.
 2022-09-16 18:42:21 +02:00
Marius Bakke
6ce5a6c2e3
gnu: antlr4: Update to 4.10.1. 
* gnu/packages/java.scm (java-antlr4-runtime): Update to 4.10.1.
[source](patches): Remove obsolete patch.
(java-antlr4-runtime-cpp): Add #:configure-flags.
(antlr4)[arguments]: Don't run tests from removed directory.  Enable one test;
exclude one file.
* gnu/packages/fontutils.scm (python-afdko)[arguments]: Add phase to build
with the C++ 17 standard.
 2022-09-16 18:42:21 +02:00
Marius Bakke
fa0efe133e
gnu: python-afdko: Update to 3.9.1. 
* gnu/packages/fontutils.scm (python-afdko): Update to 3.9.1.
[arguments]: Add phase to build with system libxml2.  Substitute antlr4_static
in one more file.
[native-inputs]: Add PKG-CONFIG.
[inputs]: Add LIBXML2.
 2022-09-16 18:42:21 +02:00
Marius Bakke
67b762d7fb
gnu: font-amiri: Update to 0.117. 
* gnu/packages/fonts.scm (font-amiri): Update to 0.117.
[native-inputs]: Add PYTHON-GLYPHSETS.
 2022-09-16 18:42:21 +02:00
Marius Bakke
28cb6687a3
gnu: python-ufo2ft: Update to 2.28.0. 
* gnu/packages/fontutils.scm (python-ufo2ft): Update to 2.28.0.
[propagated-inputs]: Replace PYTHON-FONTTOOLS with PYTHON-FONTTOOLS-NEXT.
* gnu/packages/fonts.scm (font-amiri)[native-inputs]: Likewise, to prevent
shadowing the propagated FontTools.
 2022-09-16 18:42:21 +02:00
Marius Bakke
ff1d435732
gnu: psautohint: Build with python-fonttools-next. 
* gnu/packages/fontutils.scm (psautohint)[propagated-inputs]: Replace
PYTHON-FONTTOOLS with PYTHON-FONTTOOLS-NEXT.
 2022-09-16 18:42:21 +02:00
Marius Bakke
0ddd6bb166
gnu: python-statmake: Build with python-fonttools-next. 
* gnu/packages/fontutils.scm (python-statmake)[propagated-inputs]: Change from
PYTHON-FONTTOOLS to PYTHON-FONTTOOLS-NEXT.
 2022-09-16 18:42:21 +02:00
Marius Bakke
f50fa09929
gnu: python-fonttools-next: Update to 4.37.1. 
* gnu/packages/python-xyz.scm (python-fonttools-next): Update to 4.37.1.
* gnu/packages/fontutils.scm (python-afdko)[source](snippet): Adjust expected
test output.
 2022-09-16 18:42:21 +02:00
Marius Bakke
e5e8042b8f
gnu: python-compreffor: Update to 0.5.2. 
* gnu/packages/fontutils.scm (python-compreffor): Update to 0.5.2.
 2022-09-16 18:42:21 +02:00
Marius Bakke
200e76c0af
gnu: python-fontparts: Update to 0.10.8. 
* gnu/packages/fontutils.scm (python-fontparts-bootstrap): Update to 0.10.8.
 2022-09-16 18:42:21 +02:00
Marius Bakke
0cc27cea16
gnu: python-defcon: Update to 0.10.2. 
* gnu/packages/fontutils.scm (python-defcon-bootstrap): Update to 0.10.2.
 2022-09-16 18:42:20 +02:00
Marius Bakke
1a7fed0c72
gnu: python-fontmath: Update to 0.9.2. 
* gnu/packages/fontutils.scm (python-fontmath): Update to 0.9.2.
 2022-09-16 18:42:20 +02:00
Marius Bakke
82d36421bc
gnu: Add python-glyphsets. 
* gnu/packages/fontutils.scm (python-glyphsets): New variable.
 2022-09-16 18:42:20 +02:00
Marius Bakke
d1c60dd892
gnu: Add python-glyphslib. 
* gnu/packages/fontutils.scm (python-glyphslib): New variable.
 2022-09-16 18:42:20 +02:00
Marius Bakke
fff525acca
gnu: Add python-openstep-plist. 
* gnu/packages/python-xyz.scm (python-openstep-plist): New variable.
 2022-09-16 18:42:20 +02:00
Marius Bakke
937215d562
gnu: python-afdko: Run tests in parallel. 
* gnu/packages/fontutils.scm (python-afdko)[arguments]: Adjust check phase for
parallel execution.
[native-inputs]: Add PYTHON-PYTEST-XDIST.
 2022-09-16 18:42:20 +02:00
Marius Bakke
7d4a1b8c0c
gnu: nfs-utils: Remove unused input. 
* gnu/packages/nfs.scm (nfs-utils)[inputs]: Remove LIBNFSIDMAP, which is part
of nfs-utils nowadays.
 2022-09-16 18:42:20 +02:00
Marius Bakke
d8f5cb0dcc
gnu: hitch: Update to 1.7.3. 
* gnu/packages/web.scm (hitch): Update to 1.7.3.
 2022-09-16 18:42:20 +02:00
Danny Milosavljevic
3ba8c2b507
gnu: Add openfpgaloader. 
* gnu/packages/fpga.scm (openfpgaloader): New variable.
 2022-09-16 13:17:08 +02:00
Michael Rohleder
eb9a39c1b7
gnu: celluloid: Fix build. 
Fixes <https://issues.guix.gnu.org/57839>.

* gnu/packages/video.scm (celluloid)[build-system]: Use meson-build-system.
[native-inputs]: Add desktop-file-utils, glib:bin, gtk:bin, python-wrapper.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2022-09-16 12:35:13 +02:00
Michael Rohleder
8598aa4ea3
gnu: virt-manager: Use gtksourceview@4. 
Fixes <https://issues.guix.gnu.org/57832>.

* gnu/packages/virtualization.scm (virt-manager)[inputs]: Replace
gtksourceview with gtksourceview-4.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2022-09-16 12:33:28 +02:00
M
2f95980b3c
gnu: Add shirah. 
* gnu/packages/ebook.scm (shirah): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2022-09-16 12:21:32 +02:00
M
49e120272b
gnu: Add python-syllables. 
* gnu/packages/python-xyz.scm (python-syllables): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2022-09-16 12:19:49 +02:00
M
39b21d388a
gnu: Add python-ebooklib. 
* gnu/packages/ebook.scm (python-ebooklib): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2022-09-16 12:19:46 +02:00
Luis Felipe
0ae5ff59ac
gnu: Add mazo. 
* gnu/packages/education.scm (mazo): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2022-09-16 12:10:10 +02:00
Maxim Cournoyer
02c5ed4f1b
gnu: virt-viewer: Update to 11.0 and enable more features. 
* gnu/packages/spice.scm (virt-viewer): Update to 11.0.
[build-system]: Use meson-build-system.
[arguments]: Delete field.
[native-inputs]: Replace intltool with gettext-minimal.  Add python.
[inputs]: Add bash-completion, libgovirt, libvirt-glib and vte.
 2022-09-15 22:39:12 -04:00