Ricardo Wurmus
da790d92e5
gnu: r-hdcytodata: Update to 1.22.0.
...
* gnu/packages/bioconductor.scm (r-hdcytodata): Update to 1.22.0.
Change-Id: I06afd0ffdd8c1b77ce03e9aabe59f150c28e6141
2024-01-22 13:54:45 +01:00
Ricardo Wurmus
c916f39b5c
gnu: r-genomationdata: Update to 1.34.0.
...
* gnu/packages/bioconductor.scm (r-genomationdata): Update to 1.34.0.
Change-Id: Ia8e4535efcdcbb0e706b1e9682594467ab8c2fda
2024-01-22 13:54:45 +01:00
Ricardo Wurmus
8369898fb0
gnu: r-genelendatabase: Update to 1.38.0.
...
* gnu/packages/bioconductor.scm (r-genelendatabase): Update to 1.38.0.
Change-Id: Idf120599c34af21cd3c5c854d434c93c702f0cd4
2024-01-22 13:54:45 +01:00
Ricardo Wurmus
95c3baf59f
gnu: r-flowsorted-blood-epic: Update to 2.6.0.
...
* gnu/packages/bioconductor.scm (r-flowsorted-blood-epic): Update to 2.6.0.
Change-Id: I458aa7c0ac482d1e60d6afb66b236ea6886d7ce6
2024-01-22 13:54:45 +01:00
Ricardo Wurmus
43e6cc3189
gnu: r-flowsorted-blood-450k: Update to 1.40.0.
...
* gnu/packages/bioconductor.scm (r-flowsorted-blood-450k): Update to 1.40.0.
Change-Id: Ia2d2ae18c80d3a4a7858026a424da1537d657782
2024-01-22 13:54:45 +01:00
Ricardo Wurmus
4c4f07ca26
gnu: r-copyhelper: Update to 1.34.0.
...
* gnu/packages/bioconductor.scm (r-copyhelper): Update to 1.34.0.
Change-Id: I2cfa340e85fb723615295949ef614db1761f9c6e
2024-01-22 13:54:45 +01:00
Ricardo Wurmus
f0591739ce
gnu: r-chromstardata: Update to 1.28.0.
...
* gnu/packages/bioconductor.scm (r-chromstardata): Update to 1.28.0.
Change-Id: I5146185d21a589b93152fe67df4e4a100a0b0a33
2024-01-22 13:54:45 +01:00
Ricardo Wurmus
225f49fb30
gnu: r-champdata: Update to 2.34.0.
...
* gnu/packages/bioconductor.scm (r-champdata): Update to 2.34.0.
Change-Id: I658aab6c78df1fcbd7fb4d34df144635a2a10347
2024-01-22 13:54:45 +01:00
Ricardo Wurmus
7b5db44490
gnu: r-celldex: Update to 1.12.0.
...
* gnu/packages/bioconductor.scm (r-celldex): Update to 1.12.0.
Change-Id: I565b21aafa46cb710a8acc3ab16b7905614e6838
2024-01-22 13:54:45 +01:00
Ricardo Wurmus
1aac5e7bc8
gnu: r-breakpointrdata: Update to 1.20.0.
...
* gnu/packages/bioconductor.scm (r-breakpointrdata): Update to 1.20.0.
Change-Id: I1fe98a2e5fd8bf4b3106c7315dda8dee906c5152
2024-01-22 13:54:45 +01:00
Ricardo Wurmus
6c1bb9047e
gnu: r-biscuiteerdata: Update to 1.16.0.
...
* gnu/packages/bioconductor.scm (r-biscuiteerdata): Update to 1.16.0.
[propagated-inputs]: Add r-genomicranges.
Change-Id: I5459630b266f04bbac50562cb134e9ca28bbc2d7
2024-01-22 13:54:45 +01:00
Ricardo Wurmus
cd5a4ac6df
gnu: r-bladderbatch: Update to 1.40.0.
...
* gnu/packages/bioconductor.scm (r-bladderbatch): Update to 1.40.0.
Change-Id: I2d5ec797815dd0101da8692b1fa320020c33ab85
2024-01-22 13:54:45 +01:00
Ricardo Wurmus
09ee801fe9
gnu: r-bcellviper: Update to 1.38.0.
...
* gnu/packages/bioconductor.scm (r-bcellviper): Update to 1.38.0.
Change-Id: Iaac28d6376364c0d0e30c29deb6df22c40b18b29
2024-01-22 13:54:45 +01:00
Ricardo Wurmus
ee966f03d5
gnu: r-arrmdata: Update to 1.38.0.
...
* gnu/packages/bioconductor.scm (r-arrmdata): Update to 1.38.0.
Change-Id: Id1c900cd1a058057d18129c7f2d373bc4772d5cd
2024-01-22 13:54:45 +01:00
Ricardo Wurmus
9512db59ab
gnu: r-aneufinderdata: Update to 1.30.0.
...
* gnu/packages/bioconductor.scm (r-aneufinderdata): Update to 1.30.0.
Change-Id: I94049747ac40bfe1926bfe6a34727c35e1fb6578
2024-01-22 13:54:45 +01:00
Ricardo Wurmus
8f70c2352d
gnu: r-adductdata: Update to 1.18.0.
...
* gnu/packages/bioconductor.scm (r-adductdata): Update to 1.18.0.
Change-Id: I268b9dde5e1913d17e195a77005e3c28b41f6aca
2024-01-22 13:54:45 +01:00
Ricardo Wurmus
b6fb97a250
gnu: r-pfam-db: Update to 3.18.0.
...
* gnu/packages/bioconductor.scm (r-pfam-db): Update to 3.18.0.
Change-Id: Iee6ad8fe9188cb6eb5df5f163e5af228a783b682
2024-01-22 13:54:45 +01:00
Ricardo Wurmus
f16f8105e8
gnu: r-txdb-hsapiens-ucsc-hg38-knowngene: Update to 3.18.0.
...
* gnu/packages/bioconductor.scm (r-txdb-hsapiens-ucsc-hg38-knowngene): Update to 3.18.0.
Change-Id: Ic11773dbb44ba5c90ea69142c03bbe7292ca03a6
2024-01-22 13:54:45 +01:00
Ricardo Wurmus
5265421826
gnu: r-bsgenome-hsapiens-ucsc-hg38: Update to 1.4.5.
...
* gnu/packages/bioconductor.scm (r-bsgenome-hsapiens-ucsc-hg38): Update to 1.4.5.
[propagated-inputs]: Add r-genomeinfodb.
Change-Id: I77c7e216286314619c05272a0baffb68dcd5a3e6
2024-01-22 13:54:45 +01:00
Ricardo Wurmus
505aac07c4
gnu: r-org-mm-eg-db: Update to 3.18.0.
...
* gnu/packages/bioconductor.scm (r-org-mm-eg-db): Update to 3.18.0.
Change-Id: Idee9907070a23dd79bf77e2d4a7e8ac17419826a
2024-01-22 13:54:45 +01:00
Ricardo Wurmus
f13e407689
gnu: r-org-dr-eg-db: Update to 3.18.0.
...
* gnu/packages/bioconductor.scm (r-org-dr-eg-db): Update to 3.18.0.
Change-Id: Icb7f74c83ff7189c7b02964fcb25bac6610fd790
2024-01-22 13:54:44 +01:00
Ricardo Wurmus
8445ad15ec
gnu: r-org-dm-eg-db: Update to 3.18.0.
...
* gnu/packages/bioconductor.scm (r-org-dm-eg-db): Update to 3.18.0.
Change-Id: Ic50a64af9d5b76a4c7cb8864e8e723c533218e19
2024-01-22 13:54:44 +01:00
Ricardo Wurmus
0adeabcf53
gnu: r-org-ce-eg-db: Update to 3.18.0.
...
* gnu/packages/bioconductor.scm (r-org-ce-eg-db): Update to 3.18.0.
Change-Id: Id83d4e64b80ce01abdb2fe06735e0af6b7ebac10
2024-01-22 13:54:44 +01:00
Ricardo Wurmus
297fc0d76c
gnu: r-illuminahumanmethylation450kanno-ilmn12-hg19: Update to 0.6.1.
...
* gnu/packages/bioconductor.scm (r-illuminahumanmethylation450kanno-ilmn12-hg19): Update to 0.6.1.
Change-Id: I142318c4854c75f27bcd1bfe4bfc389cbc8b3725
2024-01-22 13:54:44 +01:00
Ricardo Wurmus
c5a934df85
gnu: r-go-db: Update to 3.18.0.
...
* gnu/packages/bioconductor.scm (r-go-db): Update to 3.18.0.
Change-Id: I90ff2421b742369847353aaf32cf8bc4651afda7
2024-01-22 13:54:44 +01:00
Ricardo Wurmus
d9de950ac6
gnu: r-genomeinfodbdata: Update to 1.2.11.
...
* gnu/packages/bioconductor.scm (r-genomeinfodbdata): Update to 1.2.11.
Change-Id: Iacb39950f70c8affe457330df8b43260e71ab548
2024-01-22 13:54:44 +01:00
Ricardo Wurmus
2ee9cce50f
gnu: r-bsgenome-mmusculus-ucsc-mm10: Update to 1.4.3.
...
* gnu/packages/bioconductor.scm (r-bsgenome-mmusculus-ucsc-mm10): Update to 1.4.3.
Change-Id: Idbf573d2b4931550122119eed67879c2b13ed52f
2024-01-22 13:54:44 +01:00
Ricardo Wurmus
6ee0d63dfc
gnu: r-reactome-db: Update to 1.86.2.
...
* gnu/packages/bioconductor.scm (r-reactome-db): Update to 1.86.2.
Change-Id: I8312c151f89ef27c5f75adbdf27c098e77f05453
2024-01-22 13:54:44 +01:00
Ricardo Wurmus
287c5b085b
gnu: r-org-sc-sgd-db: Update to 3.18.0.
...
* gnu/packages/bioconductor.scm (r-org-sc-sgd-db): Update to 3.18.0.
Change-Id: I1f7a497f0b36b1fe336343e215fe5c3f179b11ed
2024-01-22 13:54:44 +01:00
Ricardo Wurmus
8ec5a25eff
gnu: r-org-bt-eg-db: Update to 3.18.0.
...
* gnu/packages/bioconductor.scm (r-org-bt-eg-db): Update to 3.18.0.
Change-Id: I4385882eeb83326af88141b301f892632f6cf678
2024-01-22 13:54:44 +01:00
Ricardo Wurmus
d2573f4e28
gnu: r-org-eck12-eg-db: Update to 3.18.0.
...
* gnu/packages/bioconductor.scm (r-org-eck12-eg-db): Update to 3.18.0.
Change-Id: Ic8b25521c9a735522c69e3d696d8a514f8d6d17c
2024-01-22 13:54:44 +01:00
Ricardo Wurmus
e775f704c8
gnu: Add r-bodymaprat.
...
* gnu/packages/bioconductor.scm (r-bodymaprat): New variable.
Change-Id: I6843b957d5722f4c5460796ba41effee5717ae45
2024-01-21 23:54:23 +01:00
Ricardo Wurmus
1d00a9edff
gnu: Add r-protgear.
...
* gnu/packages/bioconductor.scm (r-protgear): New variable.
Change-Id: Ic6d5cae65d4f76df4488ee2462071ba68b50c184
2024-01-21 11:08:13 +01:00
Ricardo Wurmus
0facea431a
gnu: Add r-netgsa.
...
* gnu/packages/bioconductor.scm (r-netgsa): New variable.
Change-Id: I79b842854db80bbacdb8ff4c9fccfabdfc04d779
2024-01-21 08:33:56 +01:00
Ricardo Wurmus
6648e34342
gnu: Add r-rcy3.
...
* gnu/packages/bioconductor.scm (r-rcy3): New variable.
Change-Id: Ia295e8a174f65c8378ae83bdc1dde2877a48ff45
2024-01-21 08:30:40 +01:00
Ricardo Wurmus
8ca35ca44f
gnu: r-cytolib: Update to 2.14.1.
...
* gnu/packages/bioconductor.scm (r-cytolib): Update to 2.14.1.
[source]: Do not unbundle included boost.
[arguments]: Remove.
[inputs]: Remove boost.
Change-Id: Ibe26b9df3f73e67fb9f53676a2c27a5aed714895
2024-01-21 00:17:45 +01:00
Ricardo Wurmus
9072f27f5d
gnu: r-org-hs-eg-db: Update to 3.18.0.
...
* gnu/packages/bioconductor.scm (r-org-hs-eg-db): Update to 3.18.0.
Change-Id: Iaba83a413858a95e81b6488a2f8cde648f0bdeed
2024-01-20 19:52:40 +01:00
Ricardo Wurmus
d441454ba8
gnu: Add r-methylclockdata.
...
* gnu/packages/bioconductor.scm (r-methylclockdata): New variable.
Change-Id: Id76373a9aec8276dcfd1ec3428d2ce9c81cc51d2
2024-01-20 19:52:24 +01:00
Ricardo Wurmus
2b3a21c55f
gnu: Add r-experimenthubdata.
...
* gnu/packages/bioconductor.scm (r-experimenthubdata): New variable.
Change-Id: I5faf26f483898b162bc1f863a4aceb6f46c52c18
2024-01-20 19:52:05 +01:00
Ricardo Wurmus
c4838027b4
gnu: Add r-jaspar2016.
...
* gnu/packages/bioconductor.scm (r-jaspar2016): New variable.
Change-Id: Ib2970791207b426c39bd0226e01107a35fec0bb2
2024-01-20 19:50:13 +01:00
Ricardo Wurmus
6f93502ced
gnu: Add r-genomicstate.
...
* gnu/packages/bioconductor.scm (r-genomicstate): New variable.
Change-Id: I1b86c8e849af7b69b5fa9ea2a0e43b4e3e1850b2
2024-01-20 19:45:26 +01:00
Ricardo Wurmus
c410d4e268
gnu: Add r-ensdb-hsapiens-v79.
...
* gnu/packages/bioconductor.scm (r-ensdb-hsapiens-v79): New variable.
Change-Id: I773615df66194ddb195f013f7000d175ac07d095
2024-01-20 19:45:26 +01:00
Ricardo Wurmus
eb1d80ac77
gnu: Add r-trnadbimport.
...
* gnu/packages/bioconductor.scm (r-trnadbimport): New variable.
Change-Id: I5a232b50c08ef999f691566ccf5c0fbaf0eb21ea
2024-01-19 23:55:43 +01:00
Ricardo Wurmus
74ce9d7e3b
gnu: Add r-trna.
...
* gnu/packages/bioconductor.scm (r-trna): New variable.
Change-Id: Ifce902910fa75ddc471d8a25cc974307c19fd1d0
2024-01-19 23:55:43 +01:00
Ricardo Wurmus
1d56a24509
gnu: Add r-modstrings.
...
* gnu/packages/bioconductor.scm (r-modstrings): New variable.
Change-Id: Ia61816213a7d128ab50a9ae2b2c8879e6ac00499
2024-01-19 23:55:43 +01:00
Ricardo Wurmus
5c10649a50
gnu: Add r-structstrings.
...
* gnu/packages/bioconductor.scm (r-structstrings): New variable.
Change-Id: I9759520a03ee8178432591c48bf56fb25a379f27
2024-01-19 23:55:43 +01:00
Ricardo Wurmus
d8c718d44c
gnu: Add r-flames.
...
* gnu/packages/bioconductor.scm (r-flames): New variable.
Change-Id: I551a8f9d7de16e2281898b9541572dd244aadc36
2024-01-19 23:55:43 +01:00
Ricardo Wurmus
fdc6c6e29f
gnu: Add r-sictools.
...
* gnu/packages/bioconductor.scm (r-sictools): New variable.
Change-Id: I6d6f821f054ff7fad190eb495eef7c73608d46d7
2024-01-18 23:10:39 +01:00
Ricardo Wurmus
f1aaaf2ac1
gnu: r-tximeta: Update to 1.20.2.
...
* gnu/packages/bioconductor.scm (r-tximeta): Update to 1.20.2.
Change-Id: I166ca1f24ecef8067f36a35a140dff345fdab7a0
2024-01-18 16:01:55 +01:00
Ricardo Wurmus
b19e208c17
gnu: r-basilisk: Update to 1.14.2.
...
* gnu/packages/bioconductor.scm (r-basilisk): Update to 1.14.2.
Change-Id: I9524ac5f52107c38b3c1172f3083836c7eabac99
2024-01-18 16:01:55 +01:00
Ricardo Wurmus
cde5a13151
gnu: r-scran: Update to 1.30.1.
...
* gnu/packages/bioconductor.scm (r-scran): Update to 1.30.1.
Change-Id: I4a2784c87fdaa09a370c4d46101dbb569bcc39ab
2024-01-18 16:01:54 +01:00
Ricardo Wurmus
eee867139c
gnu: r-xcms: Update to 4.0.2.
...
* gnu/packages/bioconductor.scm (r-xcms): Update to 4.0.2.
Change-Id: I1fe358bb287acb2810b83c383b0cd1b28e8c97b5
2024-01-18 16:01:54 +01:00
Ricardo Wurmus
a162ff0fa4
gnu: r-genomicalignments: Update to 1.38.2.
...
* gnu/packages/bioconductor.scm (r-genomicalignments): Update to 1.38.2.
Change-Id: Ia521daa60db1fab67d77be2fddf356e6e4950efd
2024-01-18 16:01:54 +01:00
Ricardo Wurmus
5ad5cb8c6e
gnu: r-edger: Update to 4.0.9.
...
* gnu/packages/bioconductor.scm (r-edger): Update to 4.0.9.
Change-Id: I253e9e2a5675b13e7947601a8726bea8aad63792
2024-01-18 16:01:54 +01:00
Ricardo Wurmus
c64c5a33b2
gnu: r-dss: Update to 2.50.1.
...
* gnu/packages/bioconductor.scm (r-dss): Update to 2.50.1.
Change-Id: Ief667e0b83ae2220900d021ebe93d27c4747c91d
2024-01-18 16:01:54 +01:00
Ricardo Wurmus
e3efa67a2e
gnu: r-densvis: Update to 1.12.1.
...
* gnu/packages/bioconductor.scm (r-densvis): Update to 1.12.1.
Change-Id: I52383b9b530fdf0fe262752d639c9f2834e70fd0
2024-01-18 16:01:54 +01:00
Ricardo Wurmus
85cc64bfb8
gnu: r-animalcules: Update to 1.18.2.
...
* gnu/packages/bioconductor.scm (r-animalcules): Update to 1.18.2.
[propagated-inputs]: Remove r-biomformat, r-glmnet, and r-plotroc; add r-rocit.
Change-Id: Idd769a9608154b66871a38701a49e84f008f849c
2024-01-18 16:01:54 +01:00
Ricardo Wurmus
59706daf02
gnu: r-cytolib: Unbundle boost.
...
* gnu/packages/bioconductor.scm (r-cytolib)[source]: Remove bundled copy of
boost.
[arguments]: Change build system to link with existing boost library.
[inputs]: Add boost, openblas, protobuf, and zlib.
Change-Id: I3d1b7d10c80ddaf8ed8eedfe9178ab212ef48e8d
2024-01-11 17:10:24 +01:00
Ricardo Wurmus
002102983f
gnu: r-singler: Update to 2.4.1.
...
* gnu/packages/bioconductor.scm (r-singler): Update to 2.4.1.
Change-Id: I9b914f8194cf3317a3102c03a2cb1970f0583d9e
2024-01-11 14:41:31 +01:00
Ricardo Wurmus
c04ec0ed02
gnu: r-biocneighbors: Update to 1.20.2.
...
* gnu/packages/bioconductor.scm (r-biocneighbors): Update to 1.20.2.
Change-Id: I1b2ee238581afe644ea3916b0bdcc360dae63f9f
2024-01-11 14:41:31 +01:00
Ricardo Wurmus
6972aba5ea
gnu: r-inspect: Update to 1.32.1.
...
* gnu/packages/bioconductor.scm (r-inspect): Update to 1.32.1.
[propagated-inputs]: Remove r-gdata; add r-readxl.
Change-Id: I80ebb3d77076cd5b0cb04d83140098251d608afd
2024-01-11 14:41:31 +01:00
Ricardo Wurmus
4ca94066f1
gnu: r-genomicalignments: Update to 1.38.1.
...
* gnu/packages/bioconductor.scm (r-genomicalignments): Update to 1.38.1.
Change-Id: I5309ec8dd3b464ba54bc94a7d0a5115cc38ecf40
2024-01-11 14:41:31 +01:00
Ricardo Wurmus
6e21d78b32
gnu: r-edger: Update to 4.0.6.
...
* gnu/packages/bioconductor.scm (r-edger): Update to 4.0.6.
Change-Id: Ic2163a951bdfcaf7c54144008ae698b32d5e59a2
2024-01-11 14:41:31 +01:00
nafkhamdc
c1fda6cf61
gnu: Add r-jaspar2020.
...
* gnu/packages/bioconductor.scm (r-jaspar2020): New variable.
Change-Id: I84f0fc2a7defc5d179ffc24aa1f30177cb3b3060
2024-01-10 18:39:13 +01:00
nafkhamdc
feab3943c1
gnu: Add r-dsb.
...
* gnu/packages/bioconductor.scm (r-dsb): New variable.
Change-Id: I34b91da1ae177bd37cfa548c5f6fede453f29bcd
2024-01-10 18:39:13 +01:00
nafkhamdc
2ec29a8c11
gnu: Add r-escape.
...
* gnu/packages/bioconductor.scm (r-escape): New variable.
Change-Id: Ia308f9c90fa81c3304f97daa4f56ae4cd722d5cc
2024-01-10 18:39:13 +01:00
Ricardo Wurmus
5cec983e04
gnu: r-edger: Update to 4.0.5.
...
* gnu/packages/bioconductor.scm (r-edger): Update to 4.0.5.
Change-Id: Ibf41684a81da1a842f1a8e41309113fb50db6ef9
2024-01-05 17:17:33 +01:00
Ricardo Wurmus
d2a6480e8e
gnu: Add r-scrnaseq.
...
* gnu/packages/bioconductor.scm (r-scrnaseq): New variable.
Change-Id: Iee25b59af0000f4d2fd7482183b43404840a336c
2024-01-05 08:57:53 +01:00
Ricardo Wurmus
e8814809c2
gnu: Add r-toast.
...
* gnu/packages/bioconductor.scm (r-toast): New variable.
Change-Id: I922508bce0bdf0304e2f40d93a63ffdb58d03aa6
2024-01-02 19:23:51 +01:00
Ricardo Wurmus
5b030de386
gnu: Add r-epidish.
...
* gnu/packages/bioconductor.scm (r-epidish): New variable.
Change-Id: Ib8ca5980149a5d3eabb3d4a68ae686b855e372d4
2024-01-02 19:22:13 +01:00
Mădălin Ionel Patrașcu
7593364d70
gnu: Add r-scgate.
...
* gnu/packages/bioconductor.scm (r-scgate): New variable.
Change-Id: I441bbea5a68882f5f619dea72abdf84619c9d02f
2024-01-02 10:19:29 +01:00
Ricardo Wurmus
00e6f55ddb
gnu: r-batchelor: Update to 1.18.1.
...
* gnu/packages/bioconductor.scm (r-batchelor): Update to 1.18.1.
Change-Id: Ic541acacc7e02951f0b2cc6d08d257fe22d7d4b4
2024-01-01 14:35:16 +01:00
Ricardo Wurmus
c8d1f64f40
gnu: r-genomeinfodb: Update to 1.38.5.
...
* gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.38.5.
Change-Id: I000bf46cc66ed4a6f1e44b12989326c121acde4c
2024-01-01 14:35:16 +01:00
Ricardo Wurmus
2510849ec9
gnu: r-sparsearray: Update to 1.2.3.
...
* gnu/packages/bioconductor.scm (r-sparsearray): Update to 1.2.3.
Change-Id: I5907db78a1261a3dbe0390737cc357bafbdb331e
2024-01-01 14:35:16 +01:00
Ricardo Wurmus
31e882e4b1
gnu: r-genomicscores: Update to 2.14.3.
...
* gnu/packages/bioconductor.scm (r-genomicscores): Update to 2.14.3.
Change-Id: I973721a2ba3a5c5d7e23c4063f363fea7bdfe77e
2024-01-01 14:35:16 +01:00
Ricardo Wurmus
e15b95c126
gnu: r-metapod: Update to 1.10.1.
...
* gnu/packages/bioconductor.scm (r-metapod): Update to 1.10.1.
Change-Id: Iafd5b48420d12f9fd02966c83914feb1ef38e510
2024-01-01 14:35:16 +01:00
Ricardo Wurmus
5673484cbc
gnu: r-biocneighbors: Update to 1.20.1.
...
* gnu/packages/bioconductor.scm (r-biocneighbors): Update to 1.20.1.
Change-Id: I34aa795404d8c083585f83d5a02810a9005bef32
2024-01-01 14:35:16 +01:00
Ricardo Wurmus
a72c6ba19a
gnu: r-genomeinfodb: Update to 1.38.4.
...
* gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.38.4.
Change-Id: Icdd7237e7a4d15a6b9554fca77423148d6f7438e
2024-01-01 14:35:16 +01:00
Ricardo Wurmus
92f179ab20
gnu: r-tximeta: Update to 1.20.1.
...
* gnu/packages/bioconductor.scm (r-tximeta): Update to 1.20.1.
Change-Id: Id29bdc8c00f957854ed5ba38c2cbbb91e04bbf78
2023-12-15 17:47:43 +01:00
Ricardo Wurmus
e19a7ca446
gnu: r-biomvrcns: Update to 1.42.2.
...
* gnu/packages/bioconductor.scm (r-biomvrcns): Update to 1.42.2.
Change-Id: I956718d0ecb503546564434fbea82a886d4de9f4
2023-12-15 17:47:43 +01:00
Ricardo Wurmus
5765ddc666
gnu: r-basilisk: Update to 1.14.1.
...
* gnu/packages/bioconductor.scm (r-basilisk): Update to 1.14.1.
Change-Id: I7c05a536a58ca7bc7d24fdb5f39a420611bebf45
2023-12-15 17:47:42 +01:00
Ricardo Wurmus
32cd9f9993
gnu: r-basilisk-utils: Update to 1.14.1.
...
* gnu/packages/bioconductor.scm (r-basilisk-utils): Update to 1.14.1.
Change-Id: Icda5e71c0a709e2de4c6303774c37224a9476d62
2023-12-15 17:47:42 +01:00
Ricardo Wurmus
1b5ffaa960
gnu: r-gviz: Update to 1.46.1.
...
* gnu/packages/bioconductor.scm (r-gviz): Update to 1.46.1.
Change-Id: I10e68ee45be2cd2cddc217e75ee6667323c4dd57
2023-12-15 17:47:42 +01:00
Ricardo Wurmus
280162165b
gnu: r-mscoreutils: Update to 1.14.1.
...
* gnu/packages/bioconductor.scm (r-mscoreutils): Update to 1.14.1.
Change-Id: Ia978e23f1f0bf5a58ffa2c76a65c5f9982629aac
2023-12-15 17:47:42 +01:00
Ricardo Wurmus
2f14829a7c
gnu: r-sparsearray: Update to 1.2.2.
...
* gnu/packages/bioconductor.scm (r-sparsearray): Update to 1.2.2.
Change-Id: I96f367bf5c39c973e1c5fad3b9620bfcaf88417a
2023-12-15 17:47:41 +01:00
Ricardo Wurmus
aa3e41026a
gnu: r-scater: Update to 1.30.1.
...
* gnu/packages/bioconductor.scm (r-scater): Update to 1.30.1.
Change-Id: I5e497b654bc4a26adc6d956f728f31ae631a239c
2023-12-15 17:47:41 +01:00
Ricardo Wurmus
2fb96bed75
gnu: r-s4vectors: Update to 0.40.2.
...
* gnu/packages/bioconductor.scm (r-s4vectors): Update to 0.40.2.
Change-Id: I6201d17fa2a6be618feb26ad632b9249f87d86c5
2023-12-15 17:47:41 +01:00
Ricardo Wurmus
ccf2d49837
gnu: r-ucell: Update to 2.6.2.
...
* gnu/packages/bioconductor.scm (r-ucell): Update to 2.6.2.
Change-Id: Ie08960a237ad1515332794b23c2bd31e94299dfe
2023-12-15 17:47:41 +01:00
Ricardo Wurmus
be56597c9d
gnu: r-variancepartition: Update to 1.32.2.
...
* gnu/packages/bioconductor.scm (r-variancepartition): Update to 1.32.2.
[propagated-inputs]: Add r-matrixstats.
Change-Id: I436a1db36ad910aec0fac87150c62735f6509575
2023-12-15 17:47:41 +01:00
Ricardo Wurmus
bb64a047b4
gnu: r-flowworkspace: Update to 4.14.1.
...
* gnu/packages/bioconductor.scm (r-flowworkspace): Update to 4.14.1.
Change-Id: I2e950e77842add2eebeeffac2492ba0ef1aa6422
2023-12-15 17:47:40 +01:00
Ricardo Wurmus
2ab52103c9
gnu: r-xcms: Update to 4.0.1.
...
* gnu/packages/bioconductor.scm (r-xcms): Update to 4.0.1.
Change-Id: I98dd730bb959d2483164177a3e534915d13fee44
2023-12-15 17:47:40 +01:00
Ricardo Wurmus
e22fc284e3
gnu: r-genomicscores: Update to 2.14.2.
...
* gnu/packages/bioconductor.scm (r-genomicscores): Update to 2.14.2.
Change-Id: I00417ef0c2f9657ec39690baa52a1cd075fb69c6
2023-12-15 17:47:40 +01:00
Ricardo Wurmus
0d5917604c
gnu: r-dose: Update to 3.28.2.
...
* gnu/packages/bioconductor.scm (r-dose): Update to 3.28.2.
[propagated-inputs]: Remove r-hpo-db and r-mpo-db; add r-yulab-utils.
Change-Id: Ia29d318cac9b1e261fb89fc4d15f8b40ec3583f3
2023-12-15 17:47:40 +01:00
Ricardo Wurmus
cff731dae5
gnu: r-lefser: Update to 1.12.1.
...
* gnu/packages/bioconductor.scm (r-lefser): Update to 1.12.1.
Change-Id: Iac94395b267e925116929d48abb3c28cff31504e
2023-12-15 17:47:39 +01:00
Ricardo Wurmus
fcdd57e5fe
gnu: r-zellkonverter: Update to 1.12.1.
...
* gnu/packages/bioconductor.scm (r-zellkonverter): Update to 1.12.1.
Change-Id: I0db7450b3eff32e739ea3b806dde96114caba440
2023-12-15 17:47:39 +01:00
Ricardo Wurmus
01f345225b
gnu: r-variantannotation: Update to 1.48.1.
...
* gnu/packages/bioconductor.scm (r-variantannotation): Update to 1.48.1.
Change-Id: I51e6a6db61fc4782823f9a7f85345742b8c7ab72
2023-12-15 17:47:39 +01:00
Ricardo Wurmus
69126c2b9c
gnu: r-trackviewer: Update to 1.38.1.
...
* gnu/packages/bioconductor.scm (r-trackviewer): Update to 1.38.1.
Change-Id: I3ec74e7c37830e7a0b3b12311e304cc2e4fe322e
2023-12-15 17:47:39 +01:00
Ricardo Wurmus
5a231ed554
gnu: r-tcgautils: Update to 1.22.2.
...
* gnu/packages/bioconductor.scm (r-tcgautils): Update to 1.22.2.
Change-Id: I9c33a55076c672fa3a6ff6c97675dee16d186a39
2023-12-15 17:47:38 +01:00
Ricardo Wurmus
27fab6cfee
gnu: r-rhdf5filters: Update to 1.14.1.
...
* gnu/packages/bioconductor.scm (r-rhdf5filters): Update to 1.14.1.
Change-Id: I260973b51c3a8e895339d1c4b6fbed8f66ccb50c
2023-12-15 17:47:38 +01:00
Ricardo Wurmus
be49fe22cd
gnu: r-rhdf5: Update to 2.46.1.
...
* gnu/packages/bioconductor.scm (r-rhdf5): Update to 2.46.1.
Change-Id: Ia4781476ab82dd867a707e98767d8ee12d208003
2023-12-15 17:47:38 +01:00
