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56762 Commits

Author SHA1 Message Date
Tobias Geerinckx-Rice
36c737a9c3
gnu: libbpf: Fix erroneous use of DESTDIR. 
It broke the pkg-config file and is almost always a mistake.

* gnu/packages/linux.scm (libbpf)[arguments]: Correctly set PREFIX.
 2020-10-06 11:02:47 +02:00
Michael Rohleder
32530a6650
gnu: chatty: Update to 0.1.16. 
* gnu/packages/messaging.scm (chatty): Update to 0.1.16.
[inputs]: Add gsettings-desktop-schemas.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
 2020-10-06 10:07:26 +02:00
Joseph LaFreniere
89ca634050
gnu: emacs-dtrt-indent: Update to 1.2. 
* gnu/packages/emacs-xyz.scm (emacs-dtrt-indent): Update to 1.2.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
 2020-10-06 10:07:26 +02:00
Michael Rohleder
79fa492fb5
gnu: emacs-helpful: Update to 0.18. 
* gnu/packages/emacs-xyz.scm (emacs-helpful): Update to 0.18.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
 2020-10-06 10:07:25 +02:00
Danny Milosavljevic
a6d78f2bba
gnu: Add memkind. 
* gnu/packages/disk.scm (memkind): New variable.
 2020-10-06 09:58:01 +02:00
Nicolas Goaziou
3b186ab72b
gnu: emacs-ivy-posframe: Update to 0.5.0. 
* gnu/packages/emacs-xyz.scm (emacs-ivy-posframe): Update to 0.5.0.
 2020-10-06 09:09:48 +02:00
Efraim Flashner
527b27f14c
gnu: vlang: Correctly refer to output directories. 
* gnu/packages/vlang.scm (vlang)[arguments]: In custom 'install phase
correctly refer to 'outputs'.
 2020-10-06 09:45:13 +03:00
Efraim Flashner
6450070b91
gnu: vlang: Use cc-for-target. 
* gnu/packages/vlang.scm (vlang)[arguments]: Don't hardcode gcc in
make-flags. In custom 'patch-makefile, don't hardcode gcc.
 2020-10-06 09:44:25 +03:00
Maxim Cournoyer
3e34f89980
gnu: lsh: Enable some tests. 
* gnu/packages/ssh.scm (lsh)[native-inputs]: Add autoconf and automake.
[arguments]: Remove #:tests? argument.
[phases]{disable-failing-tests}: New phase.
 2020-10-05 23:52:24 -04:00
Maxim Cournoyer
0ec195ff02
gnu: lsh: Fix X11 forwarding. 
Fixes <https://issues.guix.gnu.org/24049>.

* gnu/packages/patches/lsh-fix-x11-forwarding.patch: Add patch.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/ssh.scm (lsh)[source]: Apply it.
[inputs]: Add libxau.

Reported-by: myglc2 <myglc2@gmail.com>
 2020-10-05 23:48:45 -04:00
Tobias Geerinckx-Rice
fb81bd9e0b
gnu: perl-cgi: Update to 4.51. 
* gnu/packages/web.scm (perl-cgi): Update to 4.51.
 2020-10-06 02:54:03 +02:00
Tobias Geerinckx-Rice
f6a087a68f
gnu: python-flake8: Update to 3.8.4. 
* gnu/packages/python-xyz.scm (python-flake8): Update to 3.8.4.
 2020-10-06 02:54:03 +02:00
Tobias Geerinckx-Rice
f68cbccf5d
gnu: seahorse: Update to 3.36.2. 
* gnu/packages/gnome.scm (seahorse): Update to 3.36.2.
 2020-10-06 02:54:03 +02:00
Tobias Geerinckx-Rice
b8da9c30d4
gnu: s6-portable-utils: Update to 2.2.3.0. 
* gnu/packages/skarnet.scm (s6-portable-utils): Update to 2.2.3.0.
 2020-10-06 02:54:03 +02:00
Tobias Geerinckx-Rice
f182b49c87
gnu: s6-dns: Update to 2.3.3.0. 
* gnu/packages/skarnet.scm (s6-dns): Update to 2.3.3.0.
 2020-10-06 02:54:03 +02:00
Tobias Geerinckx-Rice
69ba32312b
gnu: obs: Update to 26.0.1. 
* gnu/packages/video.scm (obs): Update to 26.0.1.
 2020-10-06 02:54:02 +02:00
Tobias Geerinckx-Rice
10ac3ea2e4
gnu: goffice: Update to 0.10.48. 
* gnu/packages/gnome.scm (goffice): Update to 0.10.48.
 2020-10-06 02:54:02 +02:00
Tobias Geerinckx-Rice
05e9a46347
gnu: spice-protocol: Update to 0.14.3. 
* gnu/packages/spice.scm (spice-protocol): Update to 0.14.3.
 2020-10-06 02:54:02 +02:00
Tobias Geerinckx-Rice
6c273ee433
gnu: Fix up package copyright headers. 2020-10-06 02:54:02 +02:00
Tobias Geerinckx-Rice
d3b9cbd9c8
gnu: libshout: Update to 2.4.4. 
* gnu/packages/xiph.scm (libshout): Update to 2.4.4.
 2020-10-06 01:04:47 +02:00
Tobias Geerinckx-Rice
ec7da7d628
gnu: vlang: Run mosts tests. 
* gnu/packages/vlang.scm (vlang)[arguments]: Enable tests and add a new
‘delete-failing-tests’ and custom ‘check’ phase.
[native-inputs]: Add libx11, node, openssl, and sqlite.
 2020-10-06 01:04:47 +02:00
Tobias Geerinckx-Rice
84fa2ced47
gnu: vlang: Update to 0.1.29. 
* gnu/packages/vlang.scm (vlang): Update to 0.1.29.
 2020-10-06 01:04:47 +02:00
Tobias Geerinckx-Rice
4af2cef5e9
gnu: execline: Update to 2.6.1.1. 
* gnu/packages/skarnet.scm (execline): Update to 2.6.1.1.
 2020-10-06 01:04:47 +02:00
Tobias Geerinckx-Rice
f4dfdacebe
gnu: skalibs: Update to 2.9.3.0. 
* gnu/packages/skarnet.scm (skalibs): Update to 2.9.3.0.
 2020-10-06 01:04:47 +02:00
Tobias Geerinckx-Rice
0141d046b8
gnu: libde265: Update to 1.0.7. 
* gnu/packages/video.scm (libde265): Update to 1.0.7.
 2020-10-06 01:04:46 +02:00
Tobias Geerinckx-Rice
f4f2a1e9c6
gnu: vim: Update to 8.2.1801. 
* gnu/packages/vim.scm (vim): Update to 8.2.1801.
 2020-10-06 01:04:46 +02:00
Tobias Geerinckx-Rice
0d7c75f0b8
gnu: youtube-viewer: Update to 3.7.9. 
* gnu/packages/video.scm (youtube-viewer): Update to 3.7.9.
[inputs]: Add perl-memoize.
 2020-10-06 01:04:46 +02:00
Ricardo Wurmus
e02babf4c5
gnu: r-tclust: Update to 1.4-2. 
* gnu/packages/statistics.scm (r-tclust): Update to 1.4-2.
 2020-10-06 00:35:02 +02:00
Ricardo Wurmus
c2d80d4ca9
gnu: r-car: Update to 3.0-10. 
* gnu/packages/statistics.scm (r-car): Update to 3.0-10.
 2020-10-06 00:35:02 +02:00
Ricardo Wurmus
58ad14b049
gnu: r-quantreg: Update to 5.73. 
* gnu/packages/statistics.scm (r-quantreg): Update to 5.73.
 2020-10-06 00:35:02 +02:00
Ricardo Wurmus
32c573e3fd
gnu: r-fpc: Update to 2.2-8. 
* gnu/packages/statistics.scm (r-fpc): Update to 2.2-8.
 2020-10-06 00:35:02 +02:00
Ricardo Wurmus
07d6afb695
gnu: r-gplots: Update to 3.1.0. 
* gnu/packages/statistics.scm (r-gplots): Update to 3.1.0.
[propagated-inputs]: Remove r-gdata.
 2020-10-06 00:35:02 +02:00
Ricardo Wurmus
d92b3555bd
gnu: r-matrixstats: Update to 0.57.0. 
* gnu/packages/statistics.scm (r-matrixstats): Update to 0.57.0.
 2020-10-06 00:35:02 +02:00
Ricardo Wurmus
16d41d0d65
gnu: r-rsqlite: Update to 2.2.1. 
* gnu/packages/statistics.scm (r-rsqlite): Update to 2.2.1.
[native-inputs]: Add r-knitr.
 2020-10-06 00:35:02 +02:00
Ricardo Wurmus
4e8129f8fb
gnu: r-rmarkdown: Update to 2.4. 
* gnu/packages/statistics.scm (r-rmarkdown): Update to 2.4.
[propagated-inputs]: Remove r-base64enc.
 2020-10-06 00:35:01 +02:00
Ricardo Wurmus
5ebca6a3b7
gnu: r-readr: Update to 1.4.0. 
* gnu/packages/statistics.scm (r-readr): Update to 1.4.0.
[propagated-inputs]: Remove r-rcpp; add r-cli, r-cpp11, r-lifecycle, and r-rlang.
[native-inputs]: Add r-knitr.
 2020-10-06 00:35:01 +02:00
Ricardo Wurmus
e759d6b86d
gnu: r-withr: Update to 2.3.0. 
* gnu/packages/statistics.scm (r-withr): Update to 2.3.0.
 2020-10-06 00:35:01 +02:00
Ricardo Wurmus
6a595864a5
gnu: r-devtools: Update to 2.3.2. 
* gnu/packages/statistics.scm (r-devtools): Update to 2.3.2.
 2020-10-06 00:35:01 +02:00
Ricardo Wurmus
2753c5e7b8
gnu: r-openssl: Update to 1.4.3. 
* gnu/packages/statistics.scm (r-openssl): Update to 1.4.3.
 2020-10-06 00:35:01 +02:00
Ricardo Wurmus
44f208c3ec
gnu: r-backports: Update to 1.1.10. 
* gnu/packages/statistics.scm (r-backports): Update to 1.1.10.
 2020-10-06 00:35:01 +02:00
Ricardo Wurmus
b6c56ac2ad
gnu: r-multitaper: Update to 1.0-15. 
* gnu/packages/statistics.scm (r-multitaper): Update to 1.0-15.
 2020-10-06 00:35:01 +02:00
Ricardo Wurmus
76c145e402
gnu: r-coda: Update to 0.19-4. 
* gnu/packages/statistics.scm (r-coda): Update to 0.19-4.
 2020-10-06 00:35:01 +02:00
Ricardo Wurmus
6f68893ae4
gnu: r-knitr: Update to 1.30. 
* gnu/packages/statistics.scm (r-knitr): Update to 1.30.
 2020-10-06 00:35:01 +02:00
Ricardo Wurmus
f9def7000d
gnu: r-survival: Update to 3.2-7. 
* gnu/packages/statistics.scm (r-survival): Update to 3.2-7.
 2020-10-06 00:35:01 +02:00
Ricardo Wurmus
2429ba0047
gnu: r-seurat: Update to 3.2.2. 
* gnu/packages/cran.scm (r-seurat): Update to 3.2.2.
 2020-10-06 00:35:01 +02:00
Ricardo Wurmus
affd027250
gnu: r-tidytext: Update to 0.2.6. 
* gnu/packages/cran.scm (r-tidytext): Update to 0.2.6.
 2020-10-06 00:35:01 +02:00
Ricardo Wurmus
2bf383baca
gnu: r-tidypredict: Update to 0.4.7. 
* gnu/packages/cran.scm (r-tidypredict): Update to 0.4.7.
[propagated-inputs]: Add r-stringr and r-tidyr.
 2020-10-06 00:35:01 +02:00
Ricardo Wurmus
0918539051
gnu: r-dials: Update to 0.0.9. 
* gnu/packages/cran.scm (r-dials): Update to 0.0.9.
 2020-10-06 00:35:01 +02:00
Ricardo Wurmus
ce35e06563
gnu: r-rsample: Update to 0.0.8. 
* gnu/packages/cran.scm (r-rsample): Update to 0.0.8.
[propagated-inputs]: Add r-ellipsis, r-modeldata, and r-slider.
 2020-10-06 00:35:01 +02:00
Ricardo Wurmus
cca2c6e590
gnu: r-workflows: Update to 0.2.0. 
* gnu/packages/cran.scm (r-workflows): Update to 0.2.0.
[propagated-inputs]: Add r-tidyselect.
 2020-10-06 00:35:00 +02:00
Ricardo Wurmus
31a97a662a
gnu: r-cpp11: Update to 0.2.2. 
* gnu/packages/cran.scm (r-cpp11): Update to 0.2.2.
 2020-10-06 00:35:00 +02:00
Ricardo Wurmus
aac676e996
gnu: r-gaston: Update to 1.5.7. 
* gnu/packages/cran.scm (r-gaston): Update to 1.5.7.
 2020-10-06 00:35:00 +02:00
Ricardo Wurmus
ad3f4b13eb
gnu: r-binman: Update to 0.1.2. 
* gnu/packages/cran.scm (r-binman): Update to 0.1.2.
 2020-10-06 00:35:00 +02:00
Ricardo Wurmus
34c8d0df59
gnu: r-rxnat: Update to 1.0.14. 
* gnu/packages/cran.scm (r-rxnat): Update to 1.0.14.
[propagated-inputs]: Add r-tibble.
 2020-10-06 00:35:00 +02:00
Ricardo Wurmus
56e52ad97d
gnu: r-aws: Update to 2.5. 
* gnu/packages/cran.scm (r-aws): Update to 2.5.
 2020-10-06 00:35:00 +02:00
Ricardo Wurmus
e05869ba23
gnu: r-rpf: Update to 1.0.5. 
* gnu/packages/cran.scm (r-rpf): Update to 1.0.5.
 2020-10-06 00:35:00 +02:00
Ricardo Wurmus
860841b7ff
gnu: r-regsem: Update to 1.6.2. 
* gnu/packages/cran.scm (r-regsem): Update to 1.6.2.
[native-inputs]: Add r-knitr.
 2020-10-06 00:35:00 +02:00
Ricardo Wurmus
b68f77fc8d
gnu: r-stm: Update to 1.3.6. 
* gnu/packages/cran.scm (r-stm): Update to 1.3.6.
 2020-10-06 00:35:00 +02:00
Ricardo Wurmus
cb347b2cbf
gnu: r-quanteda: Update to 2.1.2. 
* gnu/packages/cran.scm (r-quanteda): Update to 2.1.2.
 2020-10-06 00:35:00 +02:00
Ricardo Wurmus
2959b3597a
gnu: r-diagram: Update to 1.6.5. 
* gnu/packages/cran.scm (r-diagram): Update to 1.6.5.
 2020-10-06 00:35:00 +02:00
Ricardo Wurmus
f3f0a6c138
gnu: r-acebayes: Update to 1.10. 
* gnu/packages/cran.scm (r-acebayes): Update to 1.10.
 2020-10-06 00:35:00 +02:00
Ricardo Wurmus
dd91969866
gnu: r-lhs: Update to 1.1.1. 
* gnu/packages/cran.scm (r-lhs): Update to 1.1.1.
 2020-10-06 00:35:00 +02:00
Ricardo Wurmus
e29530c2d8
gnu: r-bios2cor: Update to 2.2. 
* gnu/packages/cran.scm (r-bios2cor): Update to 2.2.
 2020-10-06 00:35:00 +02:00
Ricardo Wurmus
50946de9b1
gnu: r-parameters: Update to 0.8.6. 
* gnu/packages/cran.scm (r-parameters): Update to 0.8.6.
 2020-10-06 00:35:00 +02:00
Ricardo Wurmus
158e72308d
gnu: r-systemfonts: Update to 0.3.2. 
* gnu/packages/cran.scm (r-systemfonts): Update to 0.3.2.
 2020-10-06 00:34:59 +02:00
Ricardo Wurmus
2cab0e12b4
gnu: r-covr: Update to 3.5.1. 
* gnu/packages/cran.scm (r-covr): Update to 3.5.1.
 2020-10-06 00:34:59 +02:00
Ricardo Wurmus
57d41e9045
gnu: r-ggfortify: Update to 0.4.11. 
* gnu/packages/cran.scm (r-ggfortify): Update to 0.4.11.
 2020-10-06 00:34:59 +02:00
Ricardo Wurmus
6f44e14b0f
gnu: r-sctransform: Update to 0.3. 
* gnu/packages/cran.scm (r-sctransform): Update to 0.3.
[propagated-inputs]: Add r-future.
 2020-10-06 00:34:59 +02:00
Ricardo Wurmus
4c40cd72e6
gnu: r-ggvis: Update to 0.4.6. 
* gnu/packages/cran.scm (r-ggvis): Update to 0.4.6.
 2020-10-06 00:34:59 +02:00
Ricardo Wurmus
0532a4fd1e
gnu: r-msigdbr: Update to 7.2.1. 
* gnu/packages/cran.scm (r-msigdbr): Update to 7.2.1.
[propagated-inputs]: Add r-tidyselect.
 2020-10-06 00:34:59 +02:00
Ricardo Wurmus
3a2f2219b2
gnu: r-pegas: Update to 0.14. 
* gnu/packages/cran.scm (r-pegas): Update to 0.14.
 2020-10-06 00:34:59 +02:00
Ricardo Wurmus
53e2817fa9
gnu: r-colourpicker: Update to 1.1.0. 
* gnu/packages/cran.scm (r-colourpicker): Update to 1.1.0.
[native-inputs]: Add r-knitr.
 2020-10-06 00:34:59 +02:00
Ricardo Wurmus
112947d1c6
gnu: r-future: Update to 1.19.1. 
* gnu/packages/cran.scm (r-future): Update to 1.19.1.
 2020-10-06 00:34:59 +02:00
Ricardo Wurmus
eae0e04a28
gnu: r-globals: Update to 0.13.0. 
* gnu/packages/cran.scm (r-globals): Update to 0.13.0.
 2020-10-06 00:34:59 +02:00
Ricardo Wurmus
b4c0634116
gnu: r-spatialextremes: Update to 2.0-9. 
* gnu/packages/cran.scm (r-spatialextremes): Update to 2.0-9.
 2020-10-06 00:34:59 +02:00
Ricardo Wurmus
882ae6dcaa
gnu: r-fields: Update to 11.5. 
* gnu/packages/cran.scm (r-fields): Update to 11.5.
 2020-10-06 00:34:59 +02:00
Ricardo Wurmus
79f1b40303
gnu: r-gmp: Update to 0.6-1. 
* gnu/packages/cran.scm (r-gmp): Update to 0.6-1.
 2020-10-06 00:34:59 +02:00
Ricardo Wurmus
876a326a0f
gnu: r-bigrquery: Update to 1.3.2. 
* gnu/packages/cran.scm (r-bigrquery): Update to 1.3.2.
 2020-10-06 00:34:58 +02:00
Ricardo Wurmus
405c7e6550
gnu: r-fftwtools: Update to 0.9-9. 
* gnu/packages/cran.scm (r-fftwtools): Update to 0.9-9.
 2020-10-06 00:34:58 +02:00
Ricardo Wurmus
f273105b74
gnu: r-afex: Update to 0.28-0. 
* gnu/packages/cran.scm (r-afex): Update to 0.28-0.
 2020-10-06 00:34:58 +02:00
Ricardo Wurmus
7e0e3a6512
gnu: r-npsurv: Update to 0.5-0. 
* gnu/packages/cran.scm (r-npsurv): Update to 0.5-0.
 2020-10-06 00:34:58 +02:00
Ricardo Wurmus
f7730afb5e
gnu: r-lsei: Update to 1.3-0. 
* gnu/packages/cran.scm (r-lsei): Update to 1.3-0.
 2020-10-06 00:34:58 +02:00
Ricardo Wurmus
bc249d37d9
gnu: r-usethis: Update to 1.6.3. 
* gnu/packages/cran.scm (r-usethis): Update to 1.6.3.
 2020-10-06 00:34:58 +02:00
Ricardo Wurmus
aed63a8731
gnu: r-sjplot: Update to 2.8.5. 
* gnu/packages/cran.scm (r-sjplot): Update to 2.8.5.
 2020-10-06 00:34:58 +02:00
Ricardo Wurmus
08f7d7d71b
gnu: r-effectsize: Update to 0.3.3. 
* gnu/packages/cran.scm (r-effectsize): Update to 0.3.3.
 2020-10-06 00:34:58 +02:00
Ricardo Wurmus
d7beb6da1c
gnu: r-emmeans: Update to 1.5.1. 
* gnu/packages/cran.scm (r-emmeans): Update to 1.5.1.
 2020-10-06 00:34:58 +02:00
Ricardo Wurmus
336804fc1d
gnu: r-multcomp: Update to 1.4-14. 
* gnu/packages/cran.scm (r-multcomp): Update to 1.4-14.
 2020-10-06 00:34:58 +02:00
Ricardo Wurmus
65f463d3d8
gnu: r-sandwich: Update to 3.0-0. 
* gnu/packages/cran.scm (r-sandwich): Update to 3.0-0.
 2020-10-06 00:34:58 +02:00
Ricardo Wurmus
0ac936ea21
gnu: r-deriv: Update to 4.1.0. 
* gnu/packages/cran.scm (r-deriv): Update to 4.1.0.
 2020-10-06 00:34:58 +02:00
Ricardo Wurmus
5522640faf
gnu: r-sjlabelled: Update to 1.1.7. 
* gnu/packages/cran.scm (r-sjlabelled): Update to 1.1.7.
 2020-10-06 00:34:58 +02:00
Ricardo Wurmus
b8b75e46b5
gnu: r-insight: Update to 0.9.6. 
* gnu/packages/cran.scm (r-insight): Update to 0.9.6.
 2020-10-06 00:34:58 +02:00
Ricardo Wurmus
75c394abbf
gnu: r-bibtex: Update to 0.4.2.3. 
* gnu/packages/cran.scm (r-bibtex): Update to 0.4.2.3.
 2020-10-06 00:34:58 +02:00
Ricardo Wurmus
794a6bc342
gnu: r-openxlsx: Update to 4.2.2. 
* gnu/packages/cran.scm (r-openxlsx): Update to 4.2.2.
 2020-10-06 00:34:57 +02:00
Ricardo Wurmus
e3b821456b
gnu: r-import: Update to 1.2.0. 
* gnu/packages/cran.scm (r-import): Update to 1.2.0.
[native-inputs]: Add r-knitr.
 2020-10-06 00:34:57 +02:00
Ricardo Wurmus
6fbb3c9abe
gnu: r-trend: Update to 1.1.4. 
* gnu/packages/cran.scm (r-trend): Update to 1.1.4.
 2020-10-06 00:34:57 +02:00
Ricardo Wurmus
e010576266
gnu: r-statnet-common: Update to 4.4.1. 
* gnu/packages/cran.scm (r-statnet-common): Update to 4.4.1.
[propagated-inputs]: Add r-rle.
 2020-10-06 00:34:57 +02:00
Ricardo Wurmus
4cd4cf0925
gnu: r-tinytex: Update to 0.26. 
* gnu/packages/cran.scm (r-tinytex): Update to 0.26.
 2020-10-06 00:34:57 +02:00
Ricardo Wurmus
5f777b5ff2
gnu: r-xfun: Update to 0.18. 
* gnu/packages/cran.scm (r-xfun): Update to 0.18.
 2020-10-06 00:34:57 +02:00
Ricardo Wurmus
c4eff84f76
gnu: r-seriation: Update to 1.2-9. 
* gnu/packages/cran.scm (r-seriation): Update to 1.2-9.
 2020-10-06 00:34:57 +02:00
Ricardo Wurmus
e3199b4b4d
gnu: r-dtw: Update to 1.22-3. 
* gnu/packages/cran.scm (r-dtw): Update to 1.22-3.
 2020-10-06 00:34:57 +02:00
Ricardo Wurmus
54753cf0ee
gnu: r-vcd: Update to 1.4-8. 
* gnu/packages/cran.scm (r-vcd): Update to 1.4-8.
 2020-10-06 00:34:57 +02:00
Ricardo Wurmus
daba9cffc2
gnu: r-hardyweinberg: Update to 1.6.8. 
* gnu/packages/cran.scm (r-hardyweinberg): Update to 1.6.8.
 2020-10-06 00:34:57 +02:00
Ricardo Wurmus
fec04395bb
gnu: r-broom: Update to 0.7.1. 
* gnu/packages/cran.scm (r-broom): Update to 0.7.1.
 2020-10-06 00:34:57 +02:00
Ricardo Wurmus
6016d52f42
gnu: r-psych: Update to 2.0.9. 
* gnu/packages/cran.scm (r-psych): Update to 2.0.9.
 2020-10-06 00:34:57 +02:00
Ricardo Wurmus
f8ca0afa19
gnu: r-lava: Update to 1.6.8. 
* gnu/packages/cran.scm (r-lava): Update to 1.6.8.
[native-inputs]: Add r-knitr.
 2020-10-06 00:34:57 +02:00
Ricardo Wurmus
271e4a325e
gnu: r-getoptlong: Update to 1.0.3. 
* gnu/packages/cran.scm (r-getoptlong): Update to 1.0.3.
 2020-10-06 00:34:57 +02:00
Ricardo Wurmus
4fcf7626f7
gnu: r-htmltable: Update to 2.1.0. 
* gnu/packages/cran.scm (r-htmltable): Update to 2.1.0.
 2020-10-06 00:34:57 +02:00
Ricardo Wurmus
1b3d184e67
gnu: r-htmlwidgets: Update to 1.5.2. 
* gnu/packages/cran.scm (r-htmlwidgets): Update to 1.5.2.
[native-inputs]: Add r-knitr.
 2020-10-06 00:34:56 +02:00
Ricardo Wurmus
5f9f23f43c
gnu: r-rticles: Update to 0.16. 
* gnu/packages/cran.scm (r-rticles): Update to 0.16.
 2020-10-06 00:34:56 +02:00
Ricardo Wurmus
d7cfdc1229
gnu: r-fhtest: Update to 1.5. 
* gnu/packages/bioconductor.scm (r-fhtest): Update to 1.5.
 2020-10-06 00:34:56 +02:00
Ricardo Wurmus
65e361f98f
gnu: r-interval: Update to 1.1-0.7. 
* gnu/packages/bioconductor.scm (r-interval): Update to 1.1-0.7.
 2020-10-06 00:34:56 +02:00
Ricardo Wurmus
5412da848e
gnu: r-activedriverwgs: Update to 1.1.1. 
* gnu/packages/bioconductor.scm (r-activedriverwgs): Update to 1.1.1.
 2020-10-06 00:34:56 +02:00
Ricardo Wurmus
b0728c4d7e
gnu: Add r-slider. 
* gnu/packages/cran.scm (r-slider): New variable.
 2020-10-06 00:34:56 +02:00
Ricardo Wurmus
64d4816881
gnu: Add r-warp. 
* gnu/packages/cran.scm (r-warp): New variable.
 2020-10-06 00:34:56 +02:00
Ricardo Wurmus
f5defed0df
gnu: Add r-rle. 
* gnu/packages/cran.scm (r-rle): New variable.
 2020-10-06 00:34:53 +02:00
Ludovic Courtès
1d4ab335b2
self: Use a 'guile' that doesn't complain about locales. 
Since commit ba48895899, selected UTF-8
locales are bundled.  However, because 'guix-command' is itself a Guile
script, users would still see Guile's warning, particularly on foreign
distros:

  $ LC_ALL=sdf guix foo
  guile: warning: failed to install locale
  hint: Consider installing the `glibc-utf8-locales' [...]

User commands would print that warning, but more importantly, each
invocation of 'guix substitute' would print it, even though
'guix-daemon.service' explicitly chooses "en_US.utf8", which is in
'glibc-utf8-locales'.  This leads to confusion since users would keep
seeing this message unless/until they realize they also need to install
'glibc-utf8-locales' in root's profile.

This patch gets rid of "guile: warning: ..." for a guix-pulled 'guix'
command.

* guix/self.scm (specification->package): Add "gcc-toolchain".
(quiet-guile): New procedure.
(guix-command): Use it.
* gnu/packages/aux-files/guile-launcher.c: New file.
* Makefile.am (AUX_FILES): Add it.
 2020-10-05 23:19:19 +02:00
Nicolas Goaziou
b3417123d1
gnu: rust-time-0.1: Update to 0.1.43. 
* gnu/packages/crates-io.scm (rust-time-0.1): Update to 0.1.43.
 2020-10-05 23:00:20 +02:00
Nicolas Goaziou
788cb3cb3b
gnu: rust-chrono-0.4: Update to 0.4.13. 
* gnu/packages/crates-io.scm (rust-chrono-0.4): Update to 0.4.13.
 2020-10-05 22:37:47 +02:00
Nicolas Goaziou
7121ec8c9d
gnu: rust-base64-0: Update to 0.12.3. 
* gnu/packages/crates-io.scm (rust-base64-0): Update to 0.12.3.
 2020-10-05 22:18:28 +02:00
Tobias Geerinckx-Rice
d6a0dbd6dc
gnu: swaks: Support IPv6. 
* gnu/packages/mail.scm (swaks)[inputs]: Add perl-io-socket-inet6 and
perl-socket6.
 2020-10-05 21:49:59 +02:00
Jan (janneke) Nieuwenhuizen
dc8b4c5448
gnu: guix: Update to 1.1.0-29.4e3ed9bad9. 
* gnu/packages/package-management.scm (guix): Update to 1.1.0-29.4e3ed9bad9.
 2020-10-05 20:25:26 +02:00
Christopher Baines
c2cb0e462c
gnu: Add guix-build-coordinator. 
* gnu/packages/package-management.scm (guix-build-coordinator): New variable.
 2020-10-05 18:10:45 +01:00
Christopher Baines
b452f1b1b3
gnu: guile-prometheus: Update to 0-1.8980f39. 
This revision supports cross-compilation, so guile is added to the
native-inputs to enable this.

* gnu/packages/guile-xyz.scm (guile-prometheus): Update to 0-1.8980f39.
[native-inputs]: Add guile.
 2020-10-05 17:35:37 +01:00
Tobias Geerinckx-Rice
2eb0585ab4
gnu: knot: Remove obsolete configure flag. 
* gnu/packages/dns.scm (knot)[arguments]: Remove unused
‘--with-bash-completions’ configure flag.
 2020-10-05 18:23:06 +02:00
Tobias Geerinckx-Rice
ca4143c730
gnu: knot: Snip more pregenerated nonsource. 
ypbody.c is generated from ypbody.rl by update-parser.sh, both of which
are missing from the release tarball.  Rather than add another git file
to native-inputs, we now build from git and remove the generated files.

This follows up on commit 2b73e50c31, now
that everyone's finished building it.

* gnu/packages/dns.scm (knot)[source]: Use GIT-FETCH and GIT-FILE-NAME.
[arguments]: Add ‘--enable-fast-parser’ to #:configure-flags.
Invoke the in-tree update-parser.sh.
[native-inputs]: Remove separate update-parser.sh origin.
Add autoconf, automake, and libtool.
 2020-10-05 18:22:50 +02:00
Tobias Geerinckx-Rice
2b73e50c31
gnu: knot: Build the zone parsers from Ragel source. 
* gnu/packages/dns.scm (knot)[source]: Add snippet to remove upstream's
pregenerated ‘sources’
[arguments]: Add an ‘update-parser’ phase.
[native-inputs]: Add ragel and upstream update-parser.sh.
 2020-10-05 17:24:14 +02:00
Pierre Neidhardt
3d09e02582
gnu: Add emacs-exwm-no-x-toolkit. 
* gnu/packages/emacs-xyz.scm (emacs-exwm-no-x-toolkit): New variable.
 2020-10-05 16:46:13 +02:00
Pierre Neidhardt
aafbd8f873
gnu: Add emacs-xelb-no-x-toolkit. 
* gnu/packages/emacs-xyz.scm (emacs-xelb-no-x-toolkit): New variable.
 2020-10-05 16:46:13 +02:00
Efraim Flashner
3699ed6350
gnu: astromance: Correctly link to game data. 
Fixes <http://issues.guix.gnu.org/43797>.

* gnu/packages/games.scm (astromance)[arguments]: Adjust configure-flags
to point the DATADIR to a directory in the output.
 2020-10-05 14:39:53 +03:00
Efraim Flashner
31c81fefff
gnu: libsigc++: Remove duplicate definition. 
* gnu/packages/glib.scm (libsigc++-2): Remove variable.
(glibmm-2.64)[propagated-inputs]: Adjust accordingly.
* gnu/packages/gtk.scm (cairomm-1.13)[propagated-inputs]: Same.
 2020-10-05 14:10:00 +03:00
Efraim Flashner
b543cbcf45
gnu: rust-netlib-src-0.7: Remove package. 
* gnu/packages/crates-io.scm (rust-netlib-src-0.7): Remove package.
 2020-10-05 13:39:09 +03:00
Efraim Flashner
f408ccd262
gnu: rust-textwrap-0.11: Don't hide package. 
* gnu/packages/crates-io.scm (rust-textwrap-0.11)[arguments]: Skip
build. Add rust-termsize-0.3, rust-unicode-width-0.1 to cargo-inputs.
Add rust-rand-0.6, rust-rand-xorshift-0.1, rust-version-sync-0.6 to
cargo-development-inputs.
[properties]: Remove field.
 2020-10-05 13:39:09 +03:00
Efraim Flashner
6b9396a11d
gnu: Add rust-version-sync-0.6. 
* gnu/packages/crates-io.scm (rust-version-sync-0.6): New variable.
 2020-10-05 13:39:09 +03:00
Efraim Flashner
d2aad1a894
gnu: Add rust-toml-0.4. 
* gnu/packages/crates-io.scm (rust-toml-0.4): New variable.
 2020-10-05 13:39:08 +03:00
Efraim Flashner
2e0a4f1bce
gnu: Add rust-pulldown-cmark-0.1. 
* gnu/packages/crates-io.scm (rust-pulldown-cmark-0.1): New variable.
 2020-10-05 13:39:08 +03:00
Efraim Flashner
b1712ac9f5
gnu: Add rust-bitflags-0.9. 
* gnu/packages/crates-io.scm (rust-bitflags-0.9): New variable.
 2020-10-05 13:39:08 +03:00
Efraim Flashner
73123c9659
gnu: rust-pico-sys-0.0: Don't hide package. 
* gnu/packages/crates-io.scm (rust-pico-sys-0.0)[arguments]: Add
rust-libc-0.2, rust-gcc-0.3 to cargo-inputs.
[properties]: Remove field.
 2020-10-05 13:39:08 +03:00
Efraim Flashner
bf9d5adef9
gnu: rust-gcc-0.3: Don't hide package. 
* gnu/packages/crates-io.scm (rust-gcc-0.3): Don't inherit from
rust-cc-1.
[arguments]: Skip tests. Add rust-rayon-0.8 to cargo-inputs,
rust-tempdir-0.3 to cargo-development-inputs.
[properties]: Remove field.
 2020-10-05 13:39:08 +03:00
Efraim Flashner
9f86a6daa1
gnu: Move graphics crates to crates-graphics.scm. 
* gnu/packages/crates-graphics.scm: New module. Move rust-andrew-0.2,
rust-ansi-colours-1, rust-ansi-term-0.12, rust-ansi-term-0.11,
rust-ansi-term-0.10, rust-aom-sys-0.1, rust-ascii-canvas-2,
rust-cgl-0.3, rust-cgl-0.2, rust-cgmath-0.17, rust-cglmath-0.16,
rust-core-graphics-0.17, rust-core-video-sys-0.1, rust-dav1d-sys-0.3,
rust-euclid-0.20, rust-gfx-0.18, rust-gfx-core-0.9,
rust-gfx-device-gl-0.16, rust-gfx-gl-0.6, rust-gif-0.10, rust-gl-0.11,
rust-gl-generator-0.14, rust-gl-generator-0.13, rust-gl-generator-0.11,
rust-gl-generator-0.10, rust-gleam-0.6, rust-glutin-0.22,
rust-glutin-0.21, rust-glutin-egl-sys-0.1,
rust-glutin-emscripten-sys-0.1, rust-glutin-gles2-sys-0.1,
rust-glutin-glx-sys-0.1, rust-glutin-wayland-sys-0.1, rust-image-0.23,
rust-image-0.22, rust-image-0.21, rust-image-0.20,
rust-jpeg-decoder-0.1, rust-line-drawing-0.7, rust-lyon-geom-0.14,
rust-lyon-path-0.14, rust-osmesa-sys-0.1, rust-piston-0.49,
rust-piston-float-1.0, rust-piston-gfx-texture-0.40,
rust-piston-graphics-api-version-0.2,
rust-piston-shaders-graphics2d-0.3, rust-piston-texture-0.8,
rust-piston-viewport-1.0, rust-piston-window-0.105,
rust-piston2d-gfx-graphics-0.66, rust-pison2d-graphics-0.35,
rust-piston-event-loop-0.49, rust-pistoncore-glutin-window-0.63,
rust-pistoncore-input-0.28, rust-pistoncore-window-0.44, rust-png-0.16,
rust-png-0.15, rust-png-0.14, rust-png-0.12, rust-raw-window-handle-0.3,
rust-resize-0.3, rust-rgb-0.8, rust-smithay-client-toolkit-0.6,
rust-smithay-client-toolkit-0.4, rust-smithay-clipboard-0.3,
rust-tiff-0.5, rust-tiff-0.3, rust-tiff-0.2, rust-wayland-client-0.23,
rust-wayland-client-0.21, rust-wayland-commons-0.23,
rust-wayland-commons-0.21, rust-wayland-protocols-0.23,
rust-wayland-protocols-0.21, rust-wayland-scanner-0.23,
rust-wayland-scanner-0.21, rust-wayland-server-0.23,
rust-wayland-server-0.21, rust-wayland-sys-0.23, rust-wayland-sys-0.21,
rust-winit-0.20, rust-winit-0.19, rust-x11-2, rust-x11-clipboard-0.4,
rust-x11-dl-2, rust-y4m-0.5 to here.
* gnu/packages/crates-io.scm: ... from here.
* gnu/local.mk (GNU_SYSTEM_MODULES): Register new module.
* gnu/packages/crates-io.scm, gnu/packages/crates-gtk.scm,
gnu/packages/gnome.scm, gnu/packages/rust-apps.scm,
gnu/packages/terminals.scm, gnu/packages/video.scm: Adjust for
package movement.
 2020-10-05 13:39:07 +03:00
Efraim Flashner
efa3567ca5
gnu: rust-num-derive-0.3: Update to 0.3.2. 
* gnu/packages/crates-io.scm (rust-num-derive-0.3): Update to 0.3.2.
[arguments]: Don't skip build. In cargo-development-inputs add
rust-num-0.3, rust-num-traits-0.2.
 2020-10-05 13:39:07 +03:00
Efraim Flashner
9051fdd3dd
gnu: Add rust-num-0.3. 
* gnu/packages/crates-io.scm (rust-num-0.3): New variable.
(rust-num-0.2): Inherit from rust-num-0.3.
 2020-10-05 13:39:07 +03:00
Efraim Flashner
20bd212312
gnu: rust-num-integer-0.1: Update to 0.1.43. 
* gnu/packages/crates-io.scm (rust-num-integer-0.1): Update to 0.1.43.
 2020-10-05 13:39:07 +03:00
Efraim Flashner
5c94a6beeb
gnu: rust-num-iter-0.1: Update to 0.1.41. 
* gnu/packages/crates-io.scm (rust-num-iter-0.1): Update to 0.1.41.
 2020-10-05 13:39:07 +03:00
Efraim Flashner
a9c04753a6
gnu: Move gtk crates to crates-gtk.scm. 
* gnu/packages/crates-gtk.scm: New module. Move rust-cairo-rs-0.8,
rust-cairo-rs-0.7, rust-cairo-sys-rs-0.9, rust-gdk-pixbuf-0.8,
rust-gdk-pixbuf-0.7, rust-gdk-pixbuf-sys-0.9, rust-gio-0.8,
rust-gio-0.7, rust-gio-sys-0.9, rust-gir-format-check-0.1,
rust-glib-0.9, rust-glib-0.8, rust-glib-sys-0.9, rust-gobject-sys-0.9,
rust-gtk-rs-lgpl-docs-0.1, rust-pango-0.8, rust-pango-0.7,
rust-pango-sys-0.9, rust-pangocairo-0.9, rust-pangocairo-0.8,
rust-pangocairo-sys-0.10 to here...
* gnu/packages/crates-io.scm: ... from here.
* gnu/local.mk (GNU_SYSTEM_MODULES): Register new module.
* gnu/packages/gnome.scm: Adjust for package movement.
 2020-10-05 13:39:06 +03:00
Efraim Flashner
4b09ac7be7
gnu: rust-redox-syscall-0.1: Update to 0.1.57. 
* gnu/packages/crates-io.scm (rust-redox-syscall-0.1): Update to 0.1.57.
 2020-10-05 13:39:06 +03:00
Efraim Flashner
ff25829843
gnu: librsvg-next: Update to 2.50.1. 
* gnu/packages/gnome.scm (librsvg-next): Update to 2.50.1.
[arguments]: Build with rust-1.40. In cargo-inputs remove
rust-downcast-1.1. Replace rust-float-cmp-0.6 with 0.8,
rust-itertools-0.8 with 0.9, rust-nalgebra-0.19 with 0.21. Add
rust-string-cache-0.8, rust-tinyvec-0.3. In cargo-development-inputs add
rust-assert-cmd-1, rust-chrono-0.4, rust-float-cmp-0.8, rust-lopdf-0.25,
rust-png-0.16, rust-predicates-1, rust-tempfile-3. Add phase to work
around failing tests.
 2020-10-05 13:39:06 +03:00
Efraim Flashner
9e3084a3d3
gnu: Add rust-nalgebra-0.21. 
* gnu/packages/crates-io.scm (rust-nalgebra-0.21): New variable.
(rust-nalgebra-0.19): Inherit from rust-nalgebra-0.21.
 2020-10-05 13:39:06 +03:00
Efraim Flashner
920ef7fcc4
gnu: Add rust-lopdf-0.25. 
* gnu/packages/crates-io.scm (rust-lopdf-0.25): New variable.
 2020-10-05 13:39:06 +03:00
Efraim Flashner
169317d61d
gnu: Add rust-wide-0.4. 
* gnu/packages/crates-io.scm (rust-wide-0.4): New variable.
 2020-10-05 13:39:05 +03:00
Efraim Flashner
0e648f6a5e
gnu: Add rust-simba-0.1. 
* gnu/packages/crates-io.scm (rust-simba-0.1): New variable.
 2020-10-05 13:39:05 +03:00