futurile/guix-play
1
0
Fork 0
Code Issues Pull Requests Actions Packages Projects Releases Wiki Activity
98,258 Commits 3 Branches 0 Tags 412 MiB
1e3046810a
Commit Graph

88501 Commits

Author SHA1 Message Date
Vinicius Monego
2950ef2fff
gnu: Add python-flake8-blind-except. 
* gnu/packages/python-xyz.scm (python-flake8-blind-except): New variable.

Co-authored-by: Hartmut Goebel <h.goebel@crazy-compilers.com>
 2022-06-16 09:25:55 +02:00
Vinicius Monego
7a8beb3dea
gnu: python-requests-file: Update to 1.5.1. 
* gnu/packages/python-xyz.scm (python-requests-file): Update to 1.5.1.
[source]: Make some cosmetic changes.
[arguments]<#:phases>: Override 'check phase.
[home-page]: Don't break line.
 2022-06-16 09:25:55 +02:00
Vinicius Monego
e0b6cd0947
gnu: Add python-flake8-debugger. 
* gnu/packages/python-xyz.scm (python-flake8-debugger): New variable.
 2022-06-16 09:25:55 +02:00
Ludovic Courtès
128697d43c
gnu: wayland-protocols: Add 'release-monitoring-url' property. 
* gnu/packages/freedesktop.scm (wayland-protocols)[properties]: New
field.
 2022-06-15 23:49:24 +02:00
Efraim Flashner
0929657ec6
gnu: eigen: Honor the #:tests? flag. 
* gnu/packages/algebra.scm (eigen)[arguments]: Adjust the custom 'check
phase to honor the #:tests? flag.
 2022-06-15 21:54:35 +03:00
Clément Lassieur
673983c9c6
gnu: emacs-lsp-mode: Update to 8.0.1-0.4aafe25. 
* gnu/packages/emacs-xyz.scm (emacs-lsp-mode): Update to 8.0.1-0.4aafe25.
[arguments]: Add a 'fix-patch-el-files' phase.
 2022-06-15 15:39:50 +02:00
Tobias Geerinckx-Rice
a431d1dbc5
gnu: bind: Update to 9.16.30. 
* gnu/packages/dns.scm (isc-bind): Update to 9.16.30.
 2022-06-12 02:00:00 +02:00
Hartmut Goebel
9cccf6490d
gnu: Add rebar3-proper. 
* gnu/packages/erlang.scm (rebar3-proper): New variable.
 2022-06-15 10:58:10 +02:00
Hartmut Goebel
ffc18b87f9
gnu: Add rebar3-git-vsn. 
* gnu/packages/erlang.scm (rebar3-git-vsn): New variable.
 2022-06-15 10:58:09 +02:00
Hartmut Goebel
1e6d64c2dc
gnu: Add rebar3-raw-deps. 
* gnu/packages/erlang.scm (rebar3-raw-deps): New variable.
 2022-06-15 10:58:09 +02:00
Hartmut Goebel
00eea05ab8
gnu: Add rebar3. 
* gnu/packages/erlang.scm (rebar3): New variable.
 2022-06-15 10:58:08 +02:00
Hartmut Goebel
0018a4788b
gnu: Add erlang-covertool. 
* gnu/packages/erlang.scm (erlang-covertool): New variable.
 2022-06-15 10:58:08 +02:00
Hartmut Goebel
eb8c8ba11f
gnu: Add erlang-proper. 
* gnu/packages/erlang.scm (erlang-proper): New variable.
 2022-06-15 10:18:49 +02:00
Hartmut Goebel
d723e8d94b
gnu: Add erlang-jsone. 
* gnu/packages/erlang.scm (erlang-jsone): New variable.
 2022-06-15 10:18:48 +02:00
Hartmut Goebel
e0376bc8a4
gnu: Add erlang-edown. 
* gnu/packages/erlang.scm (erlang-edown): New variable.
 2022-06-15 10:18:48 +02:00
Hartmut Goebel
4af9fa1130
gnu: Add erlang-relx. 
* gnu/packages/erlang.scm (erlang-relx): New variable.
 2022-06-15 10:18:48 +02:00
Hartmut Goebel
539695e9d5
gnu: Add erlang-ssl-verify-fun. 
* gnu/packages/erlang.scm (erlang-ssl-verify-fun): New variable.
 2022-06-15 10:18:47 +02:00
Hartmut Goebel
2b474f45c1
gnu: Add erlang-hex-core. 
* gnu/packages/erlang.scm (erlang-hex-core): New variable.
 2022-06-15 10:18:46 +02:00
Hartmut Goebel
8680f3fbb7
gnu: Add erlang-parse-trans. 
* gnu/packages/erlang.scm (erlang-parse-trans): New variable.
 2022-06-15 10:18:46 +02:00
Hartmut Goebel
0e6f4572c1
gnu: Add erlang-providers. 
* gnu/packages/erlang.scm (erlang-providers): New variable.
 2022-06-15 10:18:45 +02:00
Hartmut Goebel
6cec25f232
gnu: Add erlang-eunit-formatters. 
* gnu/packages/erlang.scm (erlang-eunit-formatters): New variable.
 2022-06-15 10:18:45 +02:00
Hartmut Goebel
a6b7caa190
gnu: Add erlang-getopt. 
* gnu/packages/erlang.scm (erlang-getopt): New variable.
 2022-06-15 10:18:44 +02:00
Hartmut Goebel
d146de283b
gnu: Add erlang-bbmustache. 
* gnu/packages/erlang.scm (erlang-bbmustache): New variable.
 2022-06-15 10:18:44 +02:00
Hartmut Goebel
bb4546defd
gnu: Add erlang-cth-readable. 
* gnu/packages/erlang.scm (erlang-cth-readable): New variable.
 2022-06-15 10:18:44 +02:00
Hartmut Goebel
a6a1e4b9f4
gnu: Add erlang-erlware-commons. 
* gnu/packages/erlang.scm (erlang-erlware-commons): New variable.
 2022-06-15 10:18:43 +02:00
Hartmut Goebel
b5c81fb289
gnu: Add erlang-certifi. 
* gnu/packages/erlang.scm (erlang-certifi): New variable.
 2022-06-15 10:18:43 +02:00
Hartmut Goebel
922588402e
gnu: Add erlang-cf. 
* gnu/packages/erlang.scm (erlang-cf): New variable.
 2022-06-15 10:18:42 +02:00
Ludovic Courtès
8a04ac4b2f
gnu: slurm: Update to 22.05.1. 
* gnu/packages/parallel.scm (slurm): Update to 22.05.1.
(slurm-21.08): New variable.
 2022-06-15 00:25:22 +02:00
Petr Hodina
887b23a73c
gnu: Add kismet. 
* gnu/packages/networking.scm (kismet): New variable.
* gnu/local.mk: Add patch.
* gnu/packages/patches/kismet-unbundle-boost.patch: New file.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2022-06-15 00:25:22 +02:00
Petr Hodina
e51517d077
gnu: libwesockets: Update license. 
* gnu/packages/web.scm (libwebsockets)[license]: Change to expat.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-06-15 00:25:22 +02:00
Alexandros Theodotou
c363843349
gnu: rtmidi: Add version 5.0.0. 
* gnu/packages/audio.scm (rtmidi): Update to 5.0.0.
(rtmidi-4.0): New variable.
* gnu/packages/music.scm (milkytracker)[inputs]: Use RTMIDI-4.0 rather
than RTMIDI.
(zrythm)[inputs]: Likewise.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2022-06-15 00:25:21 +02:00
Alexandros Theodotou
d22bee814c
gnu: libadwaita: Update to 1.1.0. 
* gnu/packages/gnome.scm (libadwaita): Update to 1.1.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-06-15 00:25:21 +02:00
Olivier Dion
7735e8ed90
gnu: lttng-ust: Fix dependencies. 
* gnu/packages/instrumentation.scm (lttng-ust): Fix dependencies.
[inputs]: Remove liburcu.
[propagated-inputs]: Add liburcu.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-06-15 00:25:21 +02:00
Attila Lendvai
8cb1a49a39
services: configuration: Use *unspecified* instead of 'disabled. 
Use *unspecified* as a marker for field values that have not been set.

Rationale: 'disabled may easily clash with user values for boolean fields, is
confusing (i.e. its meaning is *not* boolean false, but unspecified) and it
also passes silently through the symbol? predicate of a field of type symbol.

* gnu/services/configuration.scm (configuration-missing-default-value):
Renamed from configuration-no-default-value.
(define-maybe-helper): Use *unspecified* instead of 'disabled, and make
the default value optional.
* gnu/home/services/desktop.scm (home-redshift-configuration):
Change (maybe-xyz 'disabled) to maybe-xyz.
* gnu/services/authentication.scm (nslcd-configuration): Likewise.
* gnu/services/cgit.scm (repository-cgit-configuration): Likewise.
* gnu/services/file-sharing.scm (serialize-maybe-string)
(serialize-maybe-file-object): Use 'unspecified?' instead of (eq? val
'disabled).
* gnu/services/messaging.scm (raw-content?): Likewise.
(ssl-configuration): Change (maybe-xyz 'disabled) to maybe-xyz.
(prosody-configuration): Likewise.
* gnu/services/file-sharing.scm (transmission-daemon-configuration):
Likewise.
* gnu/services/messaging.scm (define-all-configurations):
Use *unspecified* instead of 'disabled'.
* gnu/services/networking.scm (opendht-configuration): Likewise.
* gnu/services/pm.scm (tlp-configuration): Likewise.
* gnu/services/telephony.scm (jami-account): Likewise.
(jami-configuration): Likewise.
* gnu/services/vpn.scm (openvpn-client-configuration): Likewise.
* tests/services/configuration.scm ("maybe type, no default")
("maybe type, with default"): New tests.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-06-15 00:25:21 +02:00
Attila Lendvai
e11517052b
services: configuration: Support (field1 maybe-number "") format. 
As opposed to explicitly using 'disabled as value, or using the
(field1 (maybe-number) "") format.

It's mostly the work of Maxime Devos shared under #54674, with some
modifications by Attila Lendvai.

* gnu/services/configuration.scm (normalize-field-type+def): New function.
(define-configuration-helper) (define-configuration): Support new field
format.
* tests/services/configuration.scm (config-with-maybe-number->string): New
function.
("maybe value serialization of the instance"): New test.
("maybe value serialization of the instance, unspecified"): New test.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-06-15 00:25:21 +02:00
Ludovic Courtès
7046e77721
system: <operating-system> compiler truly honors the 'system' argument. 
Fixes <https://issues.guix.gnu.org/55951>.

* gnu/system.scm (operating-system-compiler): Parameterize
'%current-system' and '%current-target-system' before calling
'operating-system-derivation'.
* tests/system.scm ("lower-object, %current-system sensitivity"): New
test.
 2022-06-15 00:25:20 +02:00
Marius Bakke
13c46cc29d
gnu: PostgreSQL: Promote version 14 to the default. 
* gnu/packages/databases.scm (postgresql): Alias to POSTGRESQL-14.
* gnu/packages/qt.scm (qtbase-5)[inputs]: Stay on POSTGRESQL-13.
 2022-06-14 23:33:54 +02:00
Marius Bakke
bd16e7c32d
gnu: python-asyncpg: Update to 0.25.0. 
* gnu/packages/databases.scm (python-asyncpg): Update to 0.25.0.
[native-inputs]: Remove PYTHON-FLAKE8, PYTHON-PYCODESTYLE, PYTHON-SPHINX,
PYTHON-SPHINX-RTD-THEME, and PYTHON-SPHINXCONTRIB-ASYNCIO.
 2022-06-14 23:33:54 +02:00
Marius Bakke
d51a097460
gnu: python-tortoise-orm: Update to 0.19.1. 
* gnu/packages/databases.scm (python-tortoise-orm): Update to 0.19.1.
 2022-06-14 23:33:53 +02:00
Marius Bakke
3f033b6d9e
gnu: python-pypika-tortoise: Update to 0.1.5. 
* gnu/packages/databases.scm (python-pypika-tortoise): Update to 0.1.5.
 2022-06-14 23:33:53 +02:00
Marius Bakke
9f1713f219
gnu: gplates: Update to 2.3.01-beta.3. 
* gnu/packages/geo.scm (gplates): Update to 2.3.01-beta.3.
[source](uri): Adjust for beta releases.
[source](file-name): Adjust for zipball.
[native-inputs]: Add UNZIP.
[inputs]: Simplify.
 2022-06-14 23:33:53 +02:00
Marius Bakke
ec4515389a
gnu: perl-dbd-pg: Update to 3.15.1. 
* gnu/packages/databases.scm (perl-dbd-pg): Update to 3.15.1.
 2022-06-14 23:33:53 +02:00
Marius Bakke
334c849ba1
gnu: python-acme, certbot: Update to 1.28.0. 
* gnu/packages/tls.scm (python-acme): Update to 1.28.0.
[arguments]: Override check phase.
(certbot)[source]: Update hash.
 2022-06-14 23:33:53 +02:00
Marius Bakke
73e0063888
gnu: python-josepy: Update to 1.13.0. 
* gnu/packages/python-crypto.scm (python-josepy): Update to 1.13.0.
[propagated-inputs]: Remove PYTHON-SIX.
 2022-06-14 23:33:53 +02:00
Marius Bakke
d73b88d826
gnu: TimescaleDB: Update to 2.7.0. 
* gnu/packages/databases.scm (timescaledb): Update to 2.7.0.
[source](snippet): Remove more files.
[source](patches): New field.
* gnu/packages/patches/timescaledb-flaky-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
 2022-06-14 23:33:52 +02:00
Marius Bakke
b98a61a8f8
gnu: ruby-pg: Update to 1.3.5. 
* gnu/packages/ruby.scm (ruby-pg): Update to 1.3.5.
[home-page]: Change to current.
[source]: Switch to GIT-FETCH.
[arguments]: Add #:phases.
 2022-06-14 23:33:52 +02:00
Marius Bakke
4601dccb36
gnu: PostgreSQL@13: Update replacement to 13.7 [fixes CVE-2022-1552]. 
* gnu/packages/databases.scm (postgresql-13/replacement): Update to 13.7.
 2022-06-14 23:33:52 +02:00
Marius Bakke
3787f56734
gnu: PostgreSQL@10: Update to 10.21 [fixes CVE-2022-1552]. 
* gnu/packages/databases.scm (postgresql-10): Update to 10.21.
 2022-06-14 23:33:52 +02:00
Marius Bakke
a18f937b56
gnu: PostgreSQL@11: Update to 11.16 [fixes CVE-2022-1552]. 
* gnu/packages/databases.scm (postgresql-11): Update to 11.16.
 2022-06-14 23:33:52 +02:00
Marius Bakke
f4f31bb99c
gnu: PostgreSQL@14: Update to 14.3 [fixes CVE-2022-1552]. 
* gnu/packages/databases.scm (postgresql-14): Update to 14.3.
 2022-06-14 23:33:51 +02:00
Marius Bakke
e03b450c36
gnu: PostgreSQL: Permit loading plugins from symlink unions again. 
...this fixes a regression since 49b350fafc where the patch to disable
symlink resolving went missing from versions < 14.

* gnu/packages/databases.scm (postgresql-13/replacement): New variable.
(postgresql-13)[replacement]: New field.
(postgresql-11)[source](patches): Add 'postgresql-disable-resolve_symlinks.patch'.
 2022-06-14 23:33:51 +02:00
Greg Hogan
8e97491277
gnu: dos2unix: Update to 7.4.3. 
* gnu/packages/textutils.scm (dos2unix): Update to 7.4.3.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
 2022-06-12 02:00:00 +02:00
Greg Hogan
142d136abd
gnu: htop: Update to 3.2.1. 
* gnu/packages/admin.scm (htop): Update to 3.2.1.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
 2022-06-12 02:00:00 +02:00
Greg Hogan
ad05cb6a3c
gnu: ccache: Update to 4.6.1. 
* gnu/packages/ccache.scm (ccache): Update to 4.6.1.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
 2022-06-12 02:00:00 +02:00
Maxim Cournoyer
a860a5fa95
services: dbus: Add a VERBOSE? configuration option. 
* gnu/services/dbus.scm (<dbus-configuration>)[verbose?]: New field.
(dbus-shepherd-service): Use it.
(dbus-service)[verbose?]: Add argument and update doc.
* doc/guix.texi (Desktop Services): Document it.
 2022-06-14 14:23:21 -04:00
Maxim Cournoyer
3aaf52a129
gnu: Add dbus-verbose. 
* gnu/packages/glib.scm (dbus-verbose): New variable.
 2022-06-14 14:23:21 -04:00
Liliana Marie Prikler
330d2778a9
gnu: komikku: Update to 0.39.0. 
* gnu/packages/gnome.scm (komikku): Update to 0.39.0.
 2022-06-14 19:01:33 +02:00
Liliana Marie Prikler
391544a596
gnu: webkitgtk: Update to 2.36.3. 
* gnu/packages/webkit.scm (webkitgtk): Update to 2.36.3.
 2022-06-14 19:01:29 +02:00
Maxim Cournoyer
3dd32e76b0
gnu: h-client: Fetch source from Savannah again. 
* gnu/packages/hardware.scm (h-client)[source]: Update URL and associated
comment.
 2022-06-14 11:56:03 -04:00
Guillaume Le Vaillant
99c43cf344
gnu: cl-fof: Update to 0.2.0-1.522879e. 
* gnu/packages/lisp-xyz.scm (sbcl-fof): Update to 0.2.0-1.522879e.
  [inputs]: Sort inputs.
  [arguments]: Remove 'fix-build' phase.
 2022-06-14 16:18:07 +02:00
Guillaume Le Vaillant
d1f3bba66c
gnu: cl-dexador: Remove input labels. 
* gnu/packages/lisp-xyz.scm (sbcl-dexador)[inputs, native-inputs]: Remove
  labels and sort inputs.
 2022-06-14 15:54:09 +02:00
André A. Gomes
893fc788fb
gnu: cl-dexador: Update to 0.9.15-1.74a233e. 
* gnu/packages/lisp-xyz.scm (sbcl-dexador): Update to 0.9.15-1.74a233e.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2022-06-14 15:53:20 +02:00
Guillaume Le Vaillant
0fd660a2b2
gnu: cl-fof: Fix build with recent cl-serapeum. 
* gnu/packages/lisp-xyz.scm (sbcl-fof)[inputs]: Remove labels and add
  sbcl-named-readtables.
  [arguments]: Add 'fix-build' phase.
 2022-06-14 15:38:21 +02:00
Paul A. Patience
50b6377bc4
gnu: cl-serapeum: Update to 0.0.0-7.d2150c6. 
* gnu/packages/lisp-xyz.scm (sbcl-serapeum): Update to 0.0.0-7.d2150c6.
  [inputs]: Remove sbcl-named-readtables and sbcl-fare-quasiquote.
  Add sbcl-introspect-environment and sbcl-trivial-cltl2.
  [native-inputs]: Add sbcl-atomics.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2022-06-14 15:20:47 +02:00
Paul A. Patience
f11b6ac9ac
gnu: cl-serapeum: Use G-expressions. 
* gnu/packages/lisp-xyz.scm (sbcl-serapeum)[arguments]: Use G-expressions and
  simplify the 'disable-failing-tests' phase.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2022-06-14 15:15:42 +02:00
Paul A. Patience
240ac3b75c
gnu: cl-serapeum: Remove input labels. 
* gnu/packages/lisp-xyz.scm (sbcl-serapeum)[inputs, native-inputs]: Remove
  labels.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2022-06-14 15:14:24 +02:00
Arun Isaac
6f75565b4e
gnu: python-httpx: Update to 0.23.0. 
* gnu/packages/python-web.scm (python-httpx): Update to 0.23.0.
 2022-06-14 18:06:24 +05:30
Arun Isaac
2ac81f482a
gnu: python-httpcore: Update to 0.15.0. 
* gnu/packages/python-web.scm (python-httpcore): Update to 0.15.0.
[arguments]: Override asyncio_mode when invoking pytest in check phase.
 2022-06-14 18:06:20 +05:30
Tobias Geerinckx-Rice
2682b12ca4
gnu: dovecot: Update to 2.3.19.1. 
* gnu/packages/mail.scm (dovecot): Update to 2.3.19.1.
 2022-06-12 02:00:09 +02:00
Tobias Geerinckx-Rice
e1b647fdf6
gnu: sudo: Update to 1.9.11p2. 
* gnu/packages/admin.scm (sudo): Update to 1.9.11p2.
 2022-06-12 02:00:00 +02:00
Tobias Geerinckx-Rice
88b098d9ba
gnu: python-parted: Rename to python-pyparted. 
* gnu/packages/disk.scm (python-pyparted): New variable renamed from…
(python-parted): …this, to better follow the package naming guidelines.
Redefine it using DEPRECATED-PACKAGE.
 2022-06-12 02:00:00 +02:00
Tobias Geerinckx-Rice
67ff676792
gnu: python-parted: Update to 3.12.0. 
* gnu/packages/disk.scm (python-parted): Update to 3.12.0.
[arguments]: Run the default 'check phase at the default time.
 2022-06-12 02:00:00 +02:00
Vagrant Cascadian
824f2afcf0
gnu: autogen: Build reproducibly. 
* gnu/packages/autogen.scm (autogen)[arguments]: Add
  'use-numeric-ids-in-tarball phase.
 2022-06-13 20:56:47 -07:00
Vagrant Cascadian
3691e37eb1
gnu: autogen: Build with guile 3.0. 
* gnu/packages/autogen.scm (autogen)[arguments]: Add 'support-guile-3.0 phase.
  [inputs]: Remove guile-2.2 and add guile-3.0.
 2022-06-13 20:56:30 -07:00
Artyom V. Poptsov
4ff9f1689d
gnu: java-commons-lang3: Update to 3.12.0 
* gnu/packages/java.scm (java-commons-lang3): Update to 3.12.0.
* gnu/packages/patches/java-commons-lang-fix-dependency.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2022-06-13 22:49:13 +02:00
Andreas Enge
f2ed82eb53
gnu: sollya: Update to 8.0. 
* gnu/packages/algebra.scm (sollya): Update to 8.0.
 2022-06-13 17:50:28 +02:00
Andreas Enge
89fefe2fd4
gnu: python-fpylll: Update to 0.5.7. 
* gnu/packages/algebra.scm (python-fpylll): Update to 0.5.7.
  [source]: Revert from git to pypi.
 2022-06-13 17:40:30 +02:00
Andreas Enge
5dec5f65ec
gnu: fplll: Update to 5.4.2. 
* gnu/packages/algebra.scm (fplll): Update to 5.4.2.
[source]: Remove patch; for unknown reasons the package now compiles
without it.
* gnu/packages/patches/fplll-std-fenv.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Unregister patch.
 2022-06-13 17:16:54 +02:00
Ricardo Wurmus
35124d0087
gnu: r-quantpsyc: Update to 1.6. 
* gnu/packages/statistics.scm (r-quantpsyc): Update to 1.6.
[propagated-inputs]: Add r-dplyr and r-purrr.
 2022-06-13 15:24:30 +02:00
Ricardo Wurmus
789c7ab505
gnu: r-mnormt: Update to 2.1.0. 
* gnu/packages/statistics.scm (r-mnormt): Update to 2.1.0.
[propagated-inputs]: Remove r-tmvnsim.
 2022-06-13 15:24:30 +02:00
Ricardo Wurmus
3d7adc9b21
gnu: r-flexmix: Update to 2.3-18. 
* gnu/packages/statistics.scm (r-flexmix): Update to 2.3-18.
 2022-06-13 15:24:30 +02:00
Ricardo Wurmus
5fe57da316
gnu: r-r-oo: Update to 1.25.0. 
* gnu/packages/statistics.scm (r-r-oo): Update to 1.25.0.
 2022-06-13 15:24:30 +02:00
Ricardo Wurmus
ed945c7732
gnu: r-e1071: Update to 1.7-11. 
* gnu/packages/statistics.scm (r-e1071): Update to 1.7-11.
 2022-06-13 15:24:30 +02:00
Ricardo Wurmus
03aba54185
gnu: r-segmented: Update to 1.6-0. 
* gnu/packages/statistics.scm (r-segmented): Update to 1.6-0.
[propagated-inputs]: Add r-nlme.
 2022-06-13 15:24:30 +02:00
Ricardo Wurmus
944b4224e8
gnu: r-xml: Update to 3.99-0.10. 
* gnu/packages/statistics.scm (r-xml): Update to 3.99-0.10.
 2022-06-13 15:24:30 +02:00
Ricardo Wurmus
912792320a
gnu: r-rcurl: Update to 1.98-1.7. 
* gnu/packages/statistics.scm (r-rcurl): Update to 1.98-1.7.
 2022-06-13 15:24:29 +02:00
Ricardo Wurmus
ebcb0aa321
gnu: r-dbplyr: Update to 2.2.0. 
* gnu/packages/statistics.scm (r-dbplyr): Update to 2.2.0.
[propagated-inputs]: Remove r-ellipsis; add r-cli and r-pillar.
 2022-06-13 15:24:29 +02:00
Ricardo Wurmus
e1297b31c1
gnu: r-sendmailr: Update to 1.2-1.1. 
* gnu/packages/statistics.scm (r-sendmailr): Update to 1.2-1.1.
 2022-06-13 15:24:29 +02:00
Ricardo Wurmus
d7d62bcd61
gnu: r-zoom: Update to 2.0.6. 
* gnu/packages/cran.scm (r-zoom): Update to 2.0.6.
 2022-06-13 15:24:29 +02:00
Ricardo Wurmus
23c6a87e5d
gnu: r-pkgdown: Update to 2.0.4. 
* gnu/packages/cran.scm (r-pkgdown): Update to 2.0.4.
 2022-06-13 15:24:29 +02:00
Ricardo Wurmus
b7b5e7d4f2
gnu: r-infer: Update to 1.0.2. 
* gnu/packages/cran.scm (r-infer): Update to 1.0.2.
 2022-06-13 15:24:29 +02:00
Ricardo Wurmus
fa3f80e44f
gnu: r-yardstick: Update to 1.0.0. 
* gnu/packages/cran.scm (r-yardstick): Update to 1.0.0.
[propagated-inputs]: Remove r-proc; add r-hardhat.
 2022-06-13 15:24:29 +02:00
Ricardo Wurmus
839ec236e4
gnu: r-hardhat: Update to 1.1.0. 
* gnu/packages/cran.scm (r-hardhat): Update to 1.1.0.
 2022-06-13 15:24:29 +02:00
Ricardo Wurmus
2e0e58863a
gnu: r-posterior: Update to 1.2.2. 
* gnu/packages/cran.scm (r-posterior): Update to 1.2.2.
 2022-06-13 15:24:29 +02:00
Ricardo Wurmus
694eabcc17
gnu: r-rsconnect: Update to 0.8.26. 
* gnu/packages/cran.scm (r-rsconnect): Update to 0.8.26.
 2022-06-13 15:24:29 +02:00
Ricardo Wurmus
bc0b78bf32
gnu: r-mi: Update to 1.1. 
* gnu/packages/cran.scm (r-mi): Update to 1.1.
[native-inputs]: Add r-knitr.
 2022-06-13 15:24:28 +02:00
Ricardo Wurmus
4cc33ce2b2
gnu: r-gghighlight: Update to 0.3.3. 
* gnu/packages/cran.scm (r-gghighlight): Update to 0.3.3.
 2022-06-13 15:24:28 +02:00
Ricardo Wurmus
ea5377a641
gnu: r-torch: Update to 0.8.0. 
* gnu/packages/cran.scm (r-torch): Update to 0.8.0.
 2022-06-13 15:24:28 +02:00
Ricardo Wurmus
e0a7f404eb
gnu: r-univoutl: Update to 0.4. 
* gnu/packages/cran.scm (r-univoutl): Update to 0.4.
 2022-06-13 15:24:28 +02:00
Ricardo Wurmus
17f70b7363
gnu: r-randtoolbox: Update to 2.0.1. 
* gnu/packages/cran.scm (r-randtoolbox): Update to 2.0.1.
 2022-06-13 15:24:28 +02:00
Ricardo Wurmus
2327b15d31
gnu: r-terra: Update to 1.5-34. 
* gnu/packages/cran.scm (r-terra): Update to 1.5-34.
 2022-06-13 15:24:28 +02:00
Ricardo Wurmus
f85842a8e2
gnu: r-aplot: Update to 0.1.6. 
* gnu/packages/cran.scm (r-aplot): Update to 0.1.6.
 2022-06-13 15:24:28 +02:00
Ricardo Wurmus
58ec67948c
gnu: r-kernlab: Update to 0.9-31. 
* gnu/packages/cran.scm (r-kernlab): Update to 0.9-31.
 2022-06-13 15:24:28 +02:00
Ricardo Wurmus
bee70949b9
gnu: r-haplo-stats: Update to 1.8.9. 
* gnu/packages/cran.scm (r-haplo-stats): Update to 1.8.9.
 2022-06-13 15:24:28 +02:00
Ricardo Wurmus
1821a127e7
gnu: r-adegenet: Update to 2.1.7. 
* gnu/packages/cran.scm (r-adegenet): Update to 2.1.7.
 2022-06-13 15:24:28 +02:00
Ricardo Wurmus
3e38a5167d
gnu: r-classint: Update to 0.4-7. 
* gnu/packages/cran.scm (r-classint): Update to 0.4-7.
 2022-06-13 15:24:28 +02:00
Ricardo Wurmus
68c1510295
gnu: r-apcluster: Update to 1.4.10. 
* gnu/packages/cran.scm (r-apcluster): Update to 1.4.10.
 2022-06-13 15:24:28 +02:00
Ricardo Wurmus
0f94dd778c
gnu: r-parallelly: Update to 1.32.0. 
* gnu/packages/cran.scm (r-parallelly): Update to 1.32.0.
 2022-06-13 15:24:28 +02:00
Ricardo Wurmus
313c4234a0
gnu: r-rmpfr: Update to 0.8-9. 
* gnu/packages/cran.scm (r-rmpfr): Update to 0.8-9.
 2022-06-13 15:24:27 +02:00
Ricardo Wurmus
cac7de2fc5
gnu: r-sodium: Update to 1.2.1. 
* gnu/packages/cran.scm (r-sodium): Update to 1.2.1.
 2022-06-13 15:24:27 +02:00
Ricardo Wurmus
b3dca70aa1
gnu: r-admisc: Update to 0.28. 
* gnu/packages/cran.scm (r-admisc): Update to 0.28.
 2022-06-13 15:24:27 +02:00
Ricardo Wurmus
58e256383f
gnu: r-rgl: Update to 0.109.2. 
* gnu/packages/cran.scm (r-rgl): Update to 0.109.2.
[propagated-inputs]: Add r-base64enc and r-mime.
[native-inputs]: Add r-rmarkdown.
 2022-06-13 15:24:14 +02:00
Ricardo Wurmus
739a195622
gnu: r-flextable: Update to 0.7.2. 
* gnu/packages/cran.scm (r-flextable): Update to 0.7.2.
 2022-06-13 14:21:51 +02:00
Ricardo Wurmus
9d0ce9aaf4
gnu: r-officer: Update to 0.4.3. 
* gnu/packages/cran.scm (r-officer): Update to 0.4.3.
 2022-06-13 14:21:51 +02:00
Ricardo Wurmus
7edac5cd0a
gnu: r-rdpack: Update to 2.3.1. 
* gnu/packages/cran.scm (r-rdpack): Update to 2.3.1.
 2022-06-13 14:21:51 +02:00
Ricardo Wurmus
ba881471ac
gnu: r-ellipse: Update to 0.4.3. 
* gnu/packages/cran.scm (r-ellipse): Update to 0.4.3.
 2022-06-13 14:21:50 +02:00
Ricardo Wurmus
c3bbdd4a5b
gnu: r-sna: Update to 2.7. 
* gnu/packages/cran.scm (r-sna): Update to 2.7.
 2022-06-13 14:21:50 +02:00
Ricardo Wurmus
d72d39eaaf
gnu: r-processx: Update to 3.6.0. 
* gnu/packages/cran.scm (r-processx): Update to 3.6.0.
 2022-06-13 14:21:49 +02:00
Ricardo Wurmus
18fd4e7d70
gnu: r-vcd: Update to 1.4-10. 
* gnu/packages/cran.scm (r-vcd): Update to 1.4-10.
 2022-06-13 14:21:49 +02:00
Ricardo Wurmus
9ccb6b4bee
gnu: r-ipred: Update to 0.9-13. 
* gnu/packages/cran.scm (r-ipred): Update to 0.9-13.
 2022-06-13 14:21:49 +02:00
Ricardo Wurmus
8221425e3e
gnu: r-progressr: Update to 0.10.1. 
* gnu/packages/cran.scm (r-progressr): Update to 0.10.1.
 2022-06-13 14:21:48 +02:00
Ricardo Wurmus
38dde27cb3
gnu: r-bdsmatrix: Update to 1.3-6. 
* gnu/packages/cran.scm (r-bdsmatrix): Update to 1.3-6.
 2022-06-13 14:21:48 +02:00
Ricardo Wurmus
c992406b5a
gnu: r-sp: Update to 1.5-0. 
* gnu/packages/cran.scm (r-sp): Update to 1.5-0.
 2022-06-13 14:21:48 +02:00
Ricardo Wurmus
6ffd58142c
gnu: r-proxy: Update to 0.4-27. 
* gnu/packages/cran.scm (r-proxy): Update to 0.4-27.
 2022-06-13 14:21:47 +02:00
Ricardo Wurmus
65464d9027
gnu: r-restrserve: Update to 1.2.0. 
* gnu/packages/cran.scm (r-restrserve): Update to 1.2.0.
 2022-06-13 14:21:47 +02:00
Ricardo Wurmus
ae4c1cb0b3
gnu: r-benchmarkme: Update to 1.0.8. 
* gnu/packages/cran.scm (r-benchmarkme): Update to 1.0.8.
[propagated-inputs]: Add r-stringr.
 2022-06-13 14:21:46 +02:00
Ricardo Wurmus
1917b1f63e
gnu: r-afpt: Update to 1.1.0.2. 
* gnu/packages/cran.scm (r-afpt): Update to 1.1.0.2.
 2022-06-13 14:21:46 +02:00
Ricardo Wurmus
fce6aeba7e
gnu: r-nbpseq: Update to 0.3.1. 
* gnu/packages/bioconductor.scm (r-nbpseq): Update to 0.3.1.
 2022-06-13 14:21:46 +02:00
Ricardo Wurmus
37378829bc
gnu: r-restfulr: Update to 0.0.14. 
* gnu/packages/bioconductor.scm (r-restfulr): Update to 0.0.14.
 2022-06-13 14:21:42 +02:00
Ricardo Wurmus
7846896156
gnu: Add js-mathjax-for-r-mathjaxr. 
* gnu/packages/patches/mathjax-3.1.2-no-a11y.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/javascript.scm (js-mathjax-for-r-mathjaxr): New variable.
 2022-06-13 12:43:31 +02:00
Lars-Dominik Braun
97ebfc8f5c
gnu: python-asyncssh: Update to 2.11.0. 
* gnu/packages/ssh.scm (python-asyncssh)[version]: Update to 2.11.0.
[propagated-inputs]: Add python-typing-extensions.
[native-inputs]: Add python-fido2, python-aiofiles, netcat and
python-pytest.
[arguments]: Disable netcat autodetection. Replace 'check with call
to pytest.
 2022-06-13 12:30:17 +02:00
Artyom V. Poptsov
b40761ca9d
gnu: Add python-langcodes. 
* gnu/packages/python-xyz.scm (python-langcodes): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-06-13 12:27:35 +02:00
terramorpha
fcad622648
services: guix: Generalize extensions. 
* gnu/services/base.scm (<guix-extension>): New record type.
(guix-extension-merge): New procedure.
(guix-service-type): Honor extensions.
* doc/guix.texi (Base Services): Document it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-06-13 12:27:35 +02:00
Ludovic Courtès
8918ce6d16
gnu: racket: Avoid use of (ice-9 exceptions). 
Fixes <https://issues.guix.gnu.org/54546>.
Reported by Giovanni Biscuolo <g@xelera.eu>
and Michael Chirillo <michael.a.chirillo@gmail.com>.

* gnu/packages/racket.scm (racket): Rewrite in terms of SRFI-34/35
instead of (ice-9 exceptions).
 2022-06-13 12:27:34 +02:00
Guillaume Le Vaillant
c318f4fcb1
gnu: txr: Update to 277. 
* gnu/packages/lisp.scm (txr): Update to 277.
  [inputs]: Add zlib.
 2022-06-13 11:06:57 +02:00
Ludovic Courtès
6aa457fed1
Merge branch 'staging' 2022-06-13 08:57:51 +02:00
Marius Bakke
d4482e9a9e
gnu: ungoogled-chromium: Update to 102.0.5005.115-1. 
* gnu/packages/chromium.scm (%chromium-version): Set to 102.0.5005.115.
(%ungoogled-revision): Set to 1.
(%ungoogled-origin, ungoogled-chromium): Update hash.
 2022-06-13 00:44:12 +02:00
Marius Bakke
bcd9866eb4
gnu: LLVM, Clang, LLD: Update to 14.0.5. 
* gnu/packages/llvm.scm (llvm-14, clang-14, lld-14): Update to 14.0.5.
(%llvm-monorepo-hashes, %llvm-patches): Adjust accordingly.
 2022-06-13 00:44:12 +02:00
Marius Bakke
d3d00b1b4f
gnu: uBlock Origin: Update to 1.43.0. 
* gnu/packages/browser-extensions.scm (ublock-origin): Update to 1.43.0.
 2022-06-13 00:44:12 +02:00
Ricardo Wurmus
0006a9a83a
gnu: Add r-deconvr. 
* gnu/packages/bioconductor.scm (r-deconvr): New variable.
 2022-06-12 22:51:23 +02:00
Ricardo Wurmus
eec1724ea6
gnu: Add r-rsq. 
* gnu/packages/cran.scm (r-rsq): New variable.
 2022-06-12 22:51:23 +02:00
Ludovic Courtès
622545de6c
Merge branch 'master' into staging 2022-06-12 22:49:47 +02:00
jgart
9c036f2dfb
gnu: Add emacs-corfu-doc-terminal. 
* gnu/packages/emacs-xyz.scm (emacs-corfu-doc-terminal): New variable.

Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
 2022-06-12 13:19:24 +02:00
jgart
a473d74ff1
gnu: Add emacs-corfu-terminal. 
* gnu/packages/emacs-xyz.scm (emacs-corfu-terminal): New variable.

Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
 2022-06-12 13:19:23 +02:00
Efraim Flashner
e22b55f0b9
gnu: llvm-14: Fix configure-flags for cross-compiling. 
* gnu/packages/llvm.scm (llvm-14)[arguments]: Fix syntax error in
configure-flags when cross-compiling llvm.
 2022-06-12 13:50:47 +03:00
Efraim Flashner
3cbef19a90
gnu: zig: Limit to 64bit systems. 
* gnu/packages/zig.scm (zig)[supported-systems]: New field.
 2022-06-12 13:50:47 +03:00
Ricardo Wurmus
541823b318
gnu: r-hdf5array: Update to 1.24.1. 
* gnu/packages/bioconductor.scm (r-hdf5array): Update to 1.24.1.
 2022-06-12 11:16:30 +02:00
Ricardo Wurmus
a12ec47cbd
gnu: r-universalmotif: Update to 1.14.1. 
* gnu/packages/bioconductor.scm (r-universalmotif): Update to 1.14.1.
 2022-06-12 11:16:30 +02:00
Ricardo Wurmus
a76b657d93
gnu: r-rsubread: Update to 2.10.2. 
* gnu/packages/bioconductor.scm (r-rsubread): Update to 2.10.2.
 2022-06-12 11:16:30 +02:00
Ricardo Wurmus
41435e0e1c
gnu: r-clusterprofiler: Update to 4.4.2. 
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 4.4.2.
 2022-06-12 11:16:29 +02:00