Commit Graph

6602 Commits

Author SHA1 Message Date
Maxim Cournoyer
bec1c89891
gnu: Remove python2-mccabe.
* gnu/packages/python-xyz.scm (python2-mccabe): Delete variable.
2022-05-31 14:53:37 -04:00
Maxim Cournoyer
53cd5923ef
diagnostics: Fix typo about 0-indexed COL in location.
* guix/diagnostics.scm (source-properties->location): The location column is
0-indexed, not 1-indexed (the same as in source-properties, so the code is
accurate).
2022-05-31 14:52:14 -04:00
Maxim Cournoyer
d7c4e7a0c2
utils: Add a %guix-source-root-directory procedure.
* guix/utils.scm (%guix-source-root-directory): New procedure.
2022-05-31 14:52:14 -04:00
Maxim Cournoyer
5bc1ede862
utils: Add a 'delete-expression' procedure.
* guix/utils.scm: Fix copyright lines and order imports.
(edit-expression): Fix typo in doc.  Add a new 'include-trailing-newline?'
keyword argument.  Update doc.
(delete-expression): New procedure.
2022-05-31 14:52:13 -04:00
Maxim Cournoyer
51b6715960
packages: Fix typo in package-superseded doc.
* guix/packages.scm (package-superseded): Fix typo.
2022-05-31 14:52:13 -04:00
Ludovic Courtès
1ae0e1dc29
store: 'map/accumulate-builds' preserves caches.
Fixes <https://issues.guix.gnu.org/55721>.

Starting from the switch to functional object caches ca.
9e5812ac59, we would be losing accumulated
caches when aborting to the build handler.  This patch fixes that.

In particular, by preserving '%reference-cache-id', we avoid redundant
'query-references' RPCs, which accounted for a large part of the extra
processing time.

* guix/store.scm (build-accumulator): When returning an <unresolved>
node, call 'set-store-connection-caches!' before and after to preserve
caches.
(map/accumulate-builds): Pass STORE as the first argument to
the <unresolved> continuation.
2022-05-30 16:34:39 +02:00
Ludovic Courtès
40530ffd15
store: Record cache lookups in 'references/cached'.
* guix/store.scm (references/cached): Add call to
'record-cache-lookup!'.
2022-05-29 23:56:01 +02:00
Ricardo Wurmus
e640da33f3
Merge branch 'wip-r' 2022-05-29 11:49:03 +02:00
Ricardo Wurmus
371a83b764
scripts/import: Use pretty printer from (guix scripts style).
* guix/scripts/import.scm (guix-import): Use pretty-print-with-comments.
(newline-rewriting-port): Remove procedure.
2022-05-29 00:01:46 +02:00
Ricardo Wurmus
556ca8ba21
guix: Upgrade to Bioconductor 3.15.
* guix/build-system/r.scm (bioconductor-uri): Bump Bioconductor version to
3.15.
* guix/import/cran.scm (%bioconductor-version): Same.
2022-05-28 23:19:05 +02:00
yarl-baudig@mailoo.org
d4158ea63a
substitute: Check for --help or --version options early.
Running `guix archive --authorize` sets /etc/guix/acl to 600
via with-atomic-file-output via mkstemp!.
Then running `guix substitute --help/--version` fails on "permission denied".
While "guix substitute" is an internal tool, the options --help and --version
exist and you should be able to run those from the command line.

* guix/scripts/substitute.scm (guix-substitute): Earlier check for
--help or --version.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-05-27 23:36:36 +02:00
Ludovic Courtès
4e13ee4b57
guix package: Sort search results by package version.
Fixes <https://issues.guix.gnu.org/55480>.
Reported by Greg Hogan <code@greghogan.com>.

* guix/scripts/package.scm (find-packages-by-description): When PACKAGE1
and PACKAGE2 have the same name, sort by version.
2022-05-26 11:41:05 +02:00
Mathieu Othacehe
d2c06bf2ff
platforms: Remove the s390x platform.
Turns out this platform doesn't have a bootstrap tarball and should be
considered as not supported for now.

* guix/platforms/s390.scm: Remove it.
* Makefile.am (MODULES): Adapt it.
* doc/guix.texi (Foreign Architectures): Ditto.
2022-05-25 17:11:32 +02:00
Mathieu Othacehe
a9dcd60bc1
platforms: Remove the hurd module.
The hurd platform is now defined in the (guix platforms x86) module.

* guix/platforms/hurd.scm: Remove it.
* Makefile.am (MODULES): Adapt it.
2022-05-25 13:01:15 +02:00
Josselin Poiret
9e2b0dc9e5
build-system: linux-module: Directly use-module (guix platform).
* guix/build-system/linux-module.scm (system->arch): Remove module-ref
shenanigans.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2022-05-25 09:27:25 +02:00
Josselin Poiret
dab819d5c4
Move (gnu platform) and (gnu platforms ...) to guix/.
* gnu/platform.scm:
* gnu/platforms/arm.scm:
* gnu/platforms/hurd.scm:
* gnu/platforms/mips.scm:
* gnu/platforms/powerpc.scm:
* gnu/platforms/riscv.scm:
* gnu/platforms/s390.scm:
* gnu/platforms/x86.scm: Move to guix/.

* Makefile.am:
* doc/guix.texi (Porting to a New Platform):
* etc/release-manifest.scm:
* gnu/ci.scm:
* gnu/image.scm:
* gnu/local.mk:
* gnu/packages/bioinformatics.scm:
* gnu/packages/bootstrap.scm:
* gnu/packages/cross-base.scm:
* gnu/packages/instrumentation.scm:
* gnu/packages/linux.scm:
* gnu/system/image.scm:
* gnu/system/images/hurd.scm:
* gnu/system/images/novena.scm:
* gnu/system/images/pine64.scm:
* gnu/system/images/pinebook-pro.scm:
* gnu/system/images/rock64.scm:
* guix/scripts/build.scm:
* guix/scripts/system.scm:
* guix/self.scm: Update (gnu platform...) to (guix platform...).

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2022-05-25 09:27:25 +02:00
Ludovic Courtès
93f601d97c
profiles: 'manifest->gexp' emits 'properties' field only when needed.
Partly fixes <https://issues.guix.gnu.org/55499>.
Reported by Ricardo Wurmus <rekado@elephly.net>.

For a profile built with:

  guix install r-seurat r-cistopic r-monocle3 r-cicero-monocle3

this reduces the size of the 'manifest' file from 6.4M to 5.6M (12%).

* guix/profiles.scm (manifest->gexp)[entry->gexp]: When PROPERTIES is
empty, do not emit a 'properties' field.
2022-05-24 17:17:26 +02:00
Christopher Baines
00be2fcb0b
lint: check-derivation: Catch all exceptions.
Rather than raising the exception.

I'm looking at this as the linux-module-build-system is broken in such a way
that this causes the derivation linter to error.  With this change, it
correctly reports the issue.

* guix/lint.scm (check-derivation): Catch all exceptions.
2022-05-23 23:18:30 +01:00
Kyle Meyer
71de612e10
licenses: Add Expat No Attribution license.
* guix/licenses.scm (expat-0): New variable.
* guix/import/utils.scm (spdx-string->license): Add MIT-0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-05-23 16:24:47 +02:00
Nicolas Graves
95b0544fcf
import: utils: Update list of SPDX licenses.
* guix/import/utils.scm (spdx-string->license): Update.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-05-23 16:24:46 +02:00
Josselin Poiret
aaf547824e
scripts: package: Transform before creating manifest entries.
* guix/scripts/package.scm (options->installable): Add TRANSFORM
argument, to be able to directly transform the new packages before
creating their manifest entries.
(process-actions): Remove transform-entry, and step3, transforming
directly in step2.
* tests/guix-package.sh: Add test.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-05-23 16:24:46 +02:00
Mathieu Othacehe
08756c831c
self: Ship platform files.
* guix/self.scm (compiled-guix): Ship them.
2022-05-22 16:06:07 +02:00
Mathieu Othacehe
051c087d71
scripts: build: Highlight the current system with --list-systems.
* guix/scripts/build.scm (list-systems): Highlight it.
2022-05-22 15:15:33 +02:00
Mathieu Othacehe
b55310603f
linux: Remove system->linux-architecture procedure.
* gnu/packages/linux.scm (system->linux-architecture): Remove it.
(make-linux-libre-headers*, make-linux-libre*): Adapt them.
* guix/build-system/linux-module.scm (system->arch): Adapt it.
* gnu/packages/instrumentation.scm (uftrace): Ditto.
* gnu/packages/cross-base.scm (cross-kernel-headers): Ditto.
* gnu/packages/bioinformatics.scm (ncbi-vdb): Ditto.
* doc/guix.texi (Porting to a new platform): Update it.
2022-05-22 15:15:33 +02:00
Mathieu Othacehe
ec42d287b4
scripts: Add --list-systems and --list-targets options.
Also factorize the --system and --target build options. Check that the passed
system and target arguments are known platforms.

* doc/guix.texi (Additional Build Options): Document the new --list-systems
and --list-targets options.
* guix/scripts/build.scm (show-cross-build-options-help,
show-emulated-build-options-help, list-systems, list-targets): New procedures.
(%standard-cross-build-options, %standard-emulated-build-options): New
variables.
(show-help): Remove --system and --target entries and use
show-cross-build-options-help and show-emulated-build-options-help procedures instead.
(%options): Remove --system and --target entries and use
%standard-cross-build-options and %standard-emulated-build-options variables instead.
* guix/scripts/archive.scm (show-help, %options): Adapt them.
* guix/scripts/environment.scm: Ditto.
* guix/scripts/graph.scm: Ditto.
* guix/scripts/pack.scm: Ditto.
* guix/scripts/pull.scm: Ditto.
* guix/scripts/size.scm: Ditto.
* guix/scripts/weather.scm: Ditto.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2022-05-22 15:15:33 +02:00
Philip McGrath
9885c2fd07
gnu: elm: Support 'elm reactor'.
* gnu/packages/elm.scm (elm): Rename to ...
(elm-sans-reactor): ... this new variable.
[synopsis, description]: Tweak.
(elm): New variable.
* guix/build-system/elm.scm (default-elm): Use elm-sans-reactor.
* doc/guix.texi (Build Systems)[elm-build-system]: Update accordingly.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-05-22 01:07:54 +02:00
Philip McGrath
903c82583e
import: Add Elm importer.
* guix/import/elm.scm, guix/scripts/import/elm.scm: New files.
* Makefile.am (MODULES): Add them.
* guix/scripts/import.scm (importers): Add "elm".
* doc/guix.texi (Invoking guix import): Document Elm importer.
* doc/contributing.texi (Elm Packages): Mention it.
* tests/elm.scm ("(guix import elm)"): New test group.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-05-22 01:07:52 +02:00
Philip McGrath
9a47fd56dd
import: json: Accept '#:http-fetch' in 'json-fetch'.
For example, supplying 'http-fetch/cached' would enable caching.

* guix/import/json.scm (json-fetch): Add '#:http-fetch' argument.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-05-22 01:07:52 +02:00
Philip McGrath
ae533e3084
http-client: 'http-fetch/cached' converts strings to URIs.
* guix/http-client.scm (http-fetch/cached): Use 'string->uri' if URI is
a string, as with 'http-fetch'.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-05-22 01:07:52 +02:00
Philip McGrath
00a5a07bb2
http-client: Accept '#:headers' in 'http-fetched/cached'.
Callers can supply alternative headers as with 'http-fetch'.

* guix/http-client.scm (http-fetch/cached): Add '#:headers' argument.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-05-22 01:07:52 +02:00
Philip McGrath
dce724dc82
build-system/elm: Add implicit Elm inputs.
* guix/build-system/elm.scm (default-elm-core): New variable.
(default-elm-json): Likewise
(lower): Use them as implicit inputs when applicable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-05-22 01:07:52 +02:00
Philip McGrath
aefcfdd0ae
guix: Add elm-build-system.
* gnu/packages/patches/elm-offline-package-registry.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/elm.scm (elm): Use it.
* guix/build-system/elm.scm, guix/build/elm-build-system.scm,
tests/elm.scm: New files.
* Makefile.scm (MODULES, SCM_TESTS): Add them.
* doc/guix.texi (Build Systems): Document 'elm-build-system'.
* doc/contributing.texi (Elm Packages): New section. Document naming
conventions and utilities.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-05-22 01:07:51 +02:00
Ricardo Wurmus
dd19b191d6
guix: Remove unused import.
* guix/scripts/pull.scm: Do not import with-file-lock/no-wait from (guix build
syscalls).
2022-05-20 20:42:53 +02:00
Ricardo Wurmus
e35c08d2f9
guix: Remove duplicate definitions of dump-port.
* guix/store.scm (dump-port): Remove procedure; autoload from (guix build
utils) instead.
* guix/store/deduplication.scm (dump-port): Remove procedure; unhide dump-port
from (guix build utils).
2022-05-20 20:42:53 +02:00
Ludovic Courtès
a4994d7393
inferior: Close duplicate socketpair file descriptor.
* guix/inferior.scm (open-bidirectional-pipe): Pass SOCK_CLOEXEC to
'socketpair'.
* tests/inferior.scm ("close-inferior"): Add test.
2022-05-20 18:46:07 +02:00
Ludovic Courtès
2f17089371
store: Use a decaying cutoff in 'map/accumulate-builds'.
This reduces the wall-clock time of:

  ./pre-inst-env guix system vm gnu/system/examples/desktop.tmpl -n

from 2m13s to 53s (the timings depend on which derivations have already
been built and are in store; in this case, many were missing).

* guix/store.scm (default-cutoff): New variable.
(map/accumulate-builds): Use it.  Parameterize it in recursive calls to
have decaying cutoff.
2022-05-18 23:27:08 +02:00
Ludovic Courtès
001f4afd07
packages: Use separate package/graft cache.
* guix/packages.scm (%package-graft-cache): New variable.
(input-graft): Add (=> %package-graft-cache).
2022-05-18 23:27:03 +02:00
Ludovic Courtès
ba6ba1a5af
store: 'mcached' users can specify a cache ID.
Users of 'mcached' can now specify a cache ID; furthermore, the cache
hit rate is automatically recorded for all the caches accessed with
'mcached'.

* guix/store.scm (%max-store-connection-caches)
(%store-connection-cache-names): New variables.
(recorder-for-cache): New procedure.
(record-cache-lookup!): Add 'cache-id' parameter and rewrite in terms of
'recorder-for-cache'.
(lookup-cached-object): Add 'cache-id' parameter and honor it.
(%mcached): Add #:cache parameter and honor it.
(mcached): Add '=>' keyword and corresponding clauses.
2022-05-18 23:26:59 +02:00
Efraim Flashner
fd00ac7e27
guix: cpu: Add detection for aarch64 CPUs.
* guix/cpu.scm (cpu->gcc-architecture): Add detection logic for aarch64
CPUs.
2022-05-17 15:19:41 +03:00
Efraim Flashner
41ed6db81e
guix: cpu: Add support for reading armhf/aarch64 CPUs.
* guix/cpu.scm (current-cpu): Set flags at the beginning of the loop.
Read from '/proc/cpuinfo' until the end of the file. Add match options
for discovering armhf/aarch64 cpu configurations.
2022-05-17 15:19:37 +03:00
Maxime Devos
89a2eb25c3
search-paths: Define $SSL_CERT_DIR and $SSL_CERT_FILE.
For the ‘why’, see the docstring next to $SSL_CERT_DIR.  In later commits,
packages will be changed to use these variables and the variables will be
added to more packages.

* guix/search-paths.scm ($SSL_CERT_DIR, $SSL_CERT_FILE): New variables.
* doc/guix.texi (Search Paths): Document them.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-05-13 17:15:37 +02:00
Maxim Cournoyer
8cdad3484c
download: Add a mirror for CTAN.
* guix/download.scm (%mirrors)[ctan]: New entry.
2022-05-12 12:45:49 -04:00
Ludovic Courtès
0f024554e6
transformations: Preserve transformation order in package property.
Fixes <https://issues.guix.gnu.org/54942>.
Reported by SeerLite <seerlite@nixnet.email>.

* guix/transformations.scm (options->transformation)
[package-with-transformation-properties]: Add call to 'reverse'.
* tests/transformations.scm ("options->transformation, property order"):
New test.
2022-05-05 23:56:58 +02:00
Ludovic Courtès
3682bd4003
Add (guix least-authority).
* guix/least-authority.scm: New file.
* Makefile.am (MODULES): Add it.
* gnu/build/shepherd.scm (default-mounts): Make public.
2022-05-01 21:30:35 +02:00
Ludovic Courtès
774f8804ba
gexp: Add 'references-file'.
* gnu/services/base.scm (references-file): Remove.
* guix/gexp.scm (references-file): New procedure.
* tests/gexp.scm ("references-file"): New test.
2022-05-01 21:30:34 +02:00
Ludovic Courtès
d2c663711e
guix system: Highlight search results.
This is a followup to 5e0c347975.

* guix/scripts/system/search.scm (guix-system-search): Pass #:regexps
parameter to 'display-search-results'.
2022-04-29 22:59:08 +02:00
Ludovic Courtès
c1719a0adf
publish: Send uncached narinfo replies from the main thread.
Fixes <https://issues.guix.gnu.org/54723>.
Reported by Guillaume Le Vaillant <glv@posteo.net>.

Regression introduced in f743f2046b.

With commit f743f2046b, responses to
pipelined GETs would end up being written concurrently by many threads.
Thus the body of those responses could be interleaved and garbled.

* guix/scripts/publish.scm: Revert
f743f2046b.
* tests/publish.scm ("/*.narinfo pipeline"): New test.
2022-04-29 18:07:17 +02:00
Alex Griffin
e5098ad9b0
scripts: pack: Fix typo.
* guix/scripts/pack.scm (compressor-extenstion): Fix typo.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2022-04-26 09:12:31 +02:00
Maxim Cournoyer
96dbcd7443
pack: Fix match error for multi-packages deb packs.
* guix/scripts/pack.scm: Remove duplicated copyright line.
(debian-archive)[single-entry]: Match one or anything, not one or zero.

Reported-by: jgart <jgart@dismail.de>
2022-04-23 00:59:07 -04:00
Attila Lendvai
8852f911ff
git-download: Set locale to deal with Unicode in git metadata.
Without this the git-fetch GEXP is run in an environment that uses ASCII
character encoding when strings are crossing the Guile - C boundary.  It means
that e.g. tag names that have Unicode chars in them will cause problems,
e.g. when walking and deleting the .git directory.

An example in the wild: https://github.com/klauspost/pgzip/tags

Fixes <https://issues.guix.gnu.org/54893>.

* guix/git-download.scm (git-fetch): Call 'setenv' and 'setlocale' to
set it to en_US.utf8.
* gnu/packages/commencement.scm (glibc-utf8-locales-final): Make public.
Add 'properties' field.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2022-04-20 23:46:43 +02:00